BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3822 Length=404 Score E Sequences producing significant alignments: (Bits) Value gi|15610958|ref|NP_218339.1| hypothetical protein Rv3822 [Mycoba... 799 0.0 gi|289572075|ref|ZP_06452302.1| conserved hypothetical protein [... 798 0.0 gi|15843446|ref|NP_338483.1| hypothetical protein MT3930 [Mycoba... 798 0.0 gi|289445423|ref|ZP_06435167.1| conserved hypothetical protein [... 796 0.0 gi|31794996|ref|NP_857489.1| hypothetical protein Mb3852 [Mycoba... 792 0.0 gi|308372753|ref|ZP_07429728.2| hypothetical protein TMEG_00320 ... 759 0.0 gi|308232581|ref|ZP_07416523.2| hypothetical protein TMAG_00570 ... 747 0.0 gi|340628791|ref|YP_004747243.1| hypothetical protein MCAN_38411... 725 0.0 gi|167969937|ref|ZP_02552214.1| hypothetical protein MtubH3_1866... 716 0.0 gi|323717489|gb|EGB26692.1| hypothetical protein TMMG_00316 [Myc... 613 1e-173 gi|298527297|ref|ZP_07014706.1| conserved hypothetical protein [... 613 1e-173 gi|289441259|ref|ZP_06431003.1| conserved hypothetical protein [... 568 6e-160 gi|121639740|ref|YP_979964.1| hypothetical protein BCG_3885 [Myc... 550 2e-154 gi|341603761|emb|CCC66442.1| conserved hypothetical protein [Myc... 549 3e-154 gi|339296630|gb|AEJ48741.1| hypothetical protein CCDC5079_3552 [... 494 9e-138 gi|296166954|ref|ZP_06849370.1| conserved hypothetical protein [... 486 3e-135 gi|342860079|ref|ZP_08716731.1| hypothetical protein MCOL_14410 ... 479 3e-133 gi|339300228|gb|AEJ52338.1| hypothetical protein CCDC5180_3501 [... 390 2e-106 gi|121639739|ref|YP_979963.1| hypothetical protein BCG_3884 [Myc... 245 1e-62 gi|296170518|ref|ZP_06852104.1| conserved hypothetical protein [... 188 1e-45 gi|15840627|ref|NP_335664.1| hypothetical protein MT1221 [Mycoba... 171 3e-40 gi|15608324|ref|NP_215700.1| hypothetical protein Rv1184c [Mycob... 170 4e-40 gi|308370035|ref|ZP_07420076.2| hypothetical exported protein [M... 170 4e-40 gi|253799773|ref|YP_003032774.1| hypothetical protein TBMG_02798... 170 4e-40 gi|146760143|emb|CAJ77664.1| PE protein [Mycobacterium chelonae] 169 6e-40 gi|308231766|ref|ZP_07413691.2| hypothetical exported protein [M... 169 7e-40 gi|41408332|ref|NP_961168.1| hypothetical protein MAP2234 [Mycob... 169 9e-40 gi|336458231|gb|EGO37212.1| PE-PPE domain-containing protein [My... 168 2e-39 gi|254774576|ref|ZP_05216092.1| hypothetical protein MaviaA2_078... 168 2e-39 gi|118462506|ref|YP_880985.1| hypothetical protein MAV_1760 [Myc... 168 2e-39 gi|466805|gb|AAA17081.1| Lepb1170_F3_112 [Mycobacterium leprae] 167 4e-39 gi|342857529|ref|ZP_08714185.1| hypothetical protein MCOL_01595 ... 166 5e-39 gi|120401302|ref|YP_951131.1| hypothetical protein Mvan_0276 [My... 166 6e-39 gi|15827630|ref|NP_301893.1| hypothetical protein ML1232 [Mycoba... 166 8e-39 gi|145221005|ref|YP_001131683.1| hypothetical protein Mflv_0401 ... 162 8e-38 gi|169628033|ref|YP_001701682.1| hypothetical protein MAB_0936c ... 161 1e-37 gi|254819857|ref|ZP_05224858.1| hypothetical protein MintA_08029... 157 4e-36 gi|108797228|ref|YP_637425.1| PE-PPE-like protein [Mycobacterium... 154 3e-35 gi|126432851|ref|YP_001068542.1| hypothetical protein Mjls_0238 ... 154 3e-35 gi|118471696|ref|YP_884825.1| hypothetical protein MSMEG_0412 [M... 153 5e-35 gi|289572191|ref|ZP_06452418.1| PPE family protein [Mycobacteriu... 138 2e-30 gi|240171670|ref|ZP_04750329.1| PE-PGRS family protein [Mycobact... 135 1e-29 gi|183984907|ref|YP_001853198.1| PE-PGRS family protein [Mycobac... 129 7e-28 gi|120401776|ref|YP_951605.1| hypothetical protein Mvan_0761 [My... 129 9e-28 gi|340628503|ref|YP_004746955.1| PPE family protein [Mycobacteri... 124 2e-26 gi|15843151|ref|NP_338188.1| PPE family protein [Mycobacterium t... 123 4e-26 gi|289759695|ref|ZP_06519073.1| PPE family protein [Mycobacteriu... 123 6e-26 gi|307086331|ref|ZP_07495444.1| PPE family protein [Mycobacteriu... 123 6e-26 gi|289440968|ref|ZP_06430712.1| PPE family protein [Mycobacteriu... 122 8e-26 gi|308372578|ref|ZP_07429131.2| PPE family protein [Mycobacteriu... 122 1e-25 >gi|15610958|ref|NP_218339.1| hypothetical protein Rv3822 [Mycobacterium tuberculosis H37Rv] gi|148663690|ref|YP_001285213.1| hypothetical protein MRA_3862 [Mycobacterium tuberculosis H37Ra] gi|148825029|ref|YP_001289783.1| hypothetical protein TBFG_13856 [Mycobacterium tuberculosis F11] 26 more sequence titles Length=404 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/404 (100%), Positives = 404/404 (100%), Gaps = 0/404 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 Query 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ Sbjct 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 Query 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL Sbjct 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 Query 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD Sbjct 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 Query 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG Sbjct 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 Query 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH Sbjct 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 >gi|289572075|ref|ZP_06452302.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289748352|ref|ZP_06507730.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289755955|ref|ZP_06515333.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289545829|gb|EFD49477.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289688939|gb|EFD56368.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289696542|gb|EFD63971.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=404 Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 Query 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ Sbjct 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 Query 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAP ESQYDTINIVGQYDIFSDPPNRPGNL Sbjct 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNL 240 Query 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD Sbjct 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 Query 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG Sbjct 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 Query 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH Sbjct 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 >gi|15843446|ref|NP_338483.1| hypothetical protein MT3930 [Mycobacterium tuberculosis CDC1551] gi|13883816|gb|AAK48297.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=404 Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/404 (99%), Positives = 404/404 (100%), Gaps = 0/404 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 Query 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 TGLNSPTVG+SVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ Sbjct 121 TGLNSPTVGNSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 Query 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL Sbjct 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 Query 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD Sbjct 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 Query 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG Sbjct 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 Query 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH Sbjct 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 >gi|289445423|ref|ZP_06435167.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289572474|ref|ZP_06452701.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339633817|ref|YP_004725459.1| hypothetical protein MAF_38370 [Mycobacterium africanum GM041182] gi|289418381|gb|EFD15582.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289536905|gb|EFD41483.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339333173|emb|CCC28906.1| unnamed protein product [Mycobacterium africanum GM041182] Length=404 Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 402/404 (99%), Gaps = 0/404 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYY PTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYTPTATRHVVSYPGSFWPV 120 Query 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ Sbjct 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 Query 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAP ESQYDTINIVGQYDIFSDPPNRPGNL Sbjct 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNL 240 Query 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD Sbjct 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 Query 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG Sbjct 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 Query 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH Sbjct 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 >gi|31794996|ref|NP_857489.1| hypothetical protein Mb3852 [Mycobacterium bovis AF2122/97] gi|31620594|emb|CAD96038.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=404 Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/404 (99%), Positives = 401/404 (99%), Gaps = 0/404 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLA AAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLAYAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYY PTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYTPTATRHVVSYPGSFWPV 120 Query 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ Sbjct 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 Query 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAP ESQYDTINIVGQYDIFSDPPNRPGNL Sbjct 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNL 240 Query 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD Sbjct 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 Query 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG Sbjct 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG 360 Query 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH Sbjct 361 ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 >gi|308372753|ref|ZP_07429728.2| hypothetical protein TMEG_00320 [Mycobacterium tuberculosis SUMu005] gi|308340016|gb|EFP28867.1| hypothetical protein TMEG_00320 [Mycobacterium tuberculosis SUMu005] Length=387 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/387 (99%), Positives = 387/387 (100%), Gaps = 0/387 (0%) Query 18 VFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAP 77 +FAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAP Sbjct 1 MFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAP 60 Query 78 SPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTN 137 SPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTN Sbjct 61 SPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTN 120 Query 138 NLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAF 197 NLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAF Sbjct 121 NLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAF 180 Query 198 RPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSA 257 RPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSA Sbjct 181 RPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSA 240 Query 258 TAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALR 317 TAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALR Sbjct 241 TAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALR 300 Query 318 PIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNA 377 PIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNA Sbjct 301 PIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNA 360 Query 378 LRGANVGPGANKALSMVRGLLPKGKKH 404 LRGANVGPGANKALSMVRGLLPKGKKH Sbjct 361 LRGANVGPGANKALSMVRGLLPKGKKH 387 >gi|308232581|ref|ZP_07416523.2| hypothetical protein TMAG_00570 [Mycobacterium tuberculosis SUMu001] gi|308369245|ref|ZP_07417052.2| hypothetical protein TMBG_02362 [Mycobacterium tuberculosis SUMu002] gi|308371468|ref|ZP_07425063.2| hypothetical protein TMCG_01329 [Mycobacterium tuberculosis SUMu003] 17 more sequence titles Length=380 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/380 (99%), Positives = 380/380 (100%), Gaps = 0/380 (0%) Query 25 LRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLR 84 +RWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLR Sbjct 1 MRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLR 60 Query 85 SLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIR 144 SLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIR Sbjct 61 SLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIR 120 Query 145 STDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVP 204 STDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVP Sbjct 121 STDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVP 180 Query 205 IIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPA 264 IIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPA Sbjct 181 IIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPA 240 Query 265 RVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 RVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY Sbjct 241 RVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY 300 Query 325 QPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVG 384 QPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVG Sbjct 301 QPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVG 360 Query 385 PGANKALSMVRGLLPKGKKH 404 PGANKALSMVRGLLPKGKKH Sbjct 361 PGANKALSMVRGLLPKGKKH 380 >gi|340628791|ref|YP_004747243.1| hypothetical protein MCAN_38411 [Mycobacterium canettii CIPT 140010059] gi|340006981|emb|CCC46172.1| unnamed protein product [Mycobacterium canettii CIPT 140010059] Length=405 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/405 (95%), Positives = 388/405 (96%), Gaps = 1/405 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 Query 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ Sbjct 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 Query 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 LTFIKAGDPNNLLWRAFRPGTHVPIIDY VPAP ESQYDTINIVGQYDIFSDPPNRPGNL Sbjct 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYIVPAPVESQYDTINIVGQYDIFSDPPNRPGNL 240 Query 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD Sbjct 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD 300 Query 301 MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRG-IPAIAPAIAIPIGSTT 359 MAGLPPQAAGTVDAALRP+IDRAYQPGPAPAVNPRDLVQGIRG +T Sbjct 301 MAGLPPQAAGTVDAALRPMIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTA 360 Query 360 GASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 GASAAT+TAAATAAATNALRGA+VGPGANKALSMVRGLLPKGKKH Sbjct 361 GASAATTTAAATAAATNALRGASVGPGANKALSMVRGLLPKGKKH 405 >gi|167969937|ref|ZP_02552214.1| hypothetical protein MtubH3_18668 [Mycobacterium tuberculosis H37Ra] gi|254552938|ref|ZP_05143385.1| hypothetical protein Mtube_21259 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=365 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/365 (99%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 40 VTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGA 99 +TKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGA Sbjct 1 MTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGA 60 Query 100 NYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGT 159 NYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGT Sbjct 61 NYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGT 120 Query 160 LVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYD 219 LVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYD Sbjct 121 LVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYD 180 Query 220 TINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLG 279 TINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLG Sbjct 181 TINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLG 240 Query 280 ATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQ 339 ATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQ Sbjct 241 ATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQ 300 Query 340 GIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLP 399 GIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLP Sbjct 301 GIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLP 360 Query 400 KGKKH 404 KGKKH Sbjct 361 KGKKH 365 >gi|323717489|gb|EGB26692.1| hypothetical protein TMMG_00316 [Mycobacterium tuberculosis CDC1551A] Length=312 Score = 613 bits (1582), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 311/312 (99%), Positives = 312/312 (100%), Gaps = 0/312 (0%) Query 93 MQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFV 152 MQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVG+SVSAGTNNLDAAIRSTDGPIFV Sbjct 1 MQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGNSVSAGTNNLDAAIRSTDGPIFV 60 Query 153 AGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPA 212 AGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPA Sbjct 61 AGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPA 120 Query 213 PAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDIT 272 PAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDIT Sbjct 121 PAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDIT 180 Query 273 TTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAV 332 TTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAV Sbjct 181 TTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAV 240 Query 333 NPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALS 392 NPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALS Sbjct 241 NPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALS 300 Query 393 MVRGLLPKGKKH 404 MVRGLLPKGKKH Sbjct 301 MVRGLLPKGKKH 312 >gi|298527297|ref|ZP_07014706.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497091|gb|EFI32385.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=312 Score = 613 bits (1582), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 311/312 (99%), Positives = 311/312 (99%), Gaps = 0/312 (0%) Query 93 MQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFV 152 MQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFV Sbjct 1 MQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFV 60 Query 153 AGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPA 212 GLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPA Sbjct 61 VGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPA 120 Query 213 PAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDIT 272 PAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDIT Sbjct 121 PAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDIT 180 Query 273 TTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAV 332 TTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAV Sbjct 181 TTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAV 240 Query 333 NPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALS 392 NPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALS Sbjct 241 NPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALS 300 Query 393 MVRGLLPKGKKH 404 MVRGLLPKGKKH Sbjct 301 MVRGLLPKGKKH 312 >gi|289441259|ref|ZP_06431003.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289414178|gb|EFD11418.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=314 Score = 568 bits (1464), Expect = 6e-160, Method: Compositional matrix adjust. Identities = 290/313 (93%), Positives = 290/313 (93%), Gaps = 2/313 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 Query 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ Sbjct 121 TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ 180 Query 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL 240 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAP ESQYDTINIVGQYDIFSDPPNRPGNL Sbjct 181 LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNL 240 Query 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFI-RTDQLPLVRALV 299 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATT RA Sbjct 241 LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTNELLHPERSATSWCRAAG 300 Query 300 DMAG-LPPQAAGT 311 G PPQAA T Sbjct 301 GHGGACPPQAART 313 >gi|121639740|ref|YP_979964.1| hypothetical protein BCG_3885 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992235|ref|YP_002646925.1| hypothetical protein JTY_3887 [Mycobacterium bovis BCG str. Tokyo 172] gi|121495388|emb|CAL73875.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775351|dbj|BAH28157.1| hypothetical protein JTY_3887 [Mycobacterium bovis BCG str. Tokyo 172] Length=282 Score = 550 bits (1416), Expect = 2e-154, Method: Compositional matrix adjust. Identities = 280/282 (99%), Positives = 281/282 (99%), Gaps = 0/282 (0%) Query 123 LNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLT 182 +NSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLT Sbjct 1 MNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLT 60 Query 183 FIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLA 242 FIKAGDPNNLLWRAFRPGTHVPIIDYTVPAP ESQYDTINIVGQYDIFSDPPNRPGNLLA Sbjct 61 FIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNLLA 120 Query 243 DLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMA 302 DLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMA Sbjct 121 DLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMA 180 Query 303 GLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGAS 362 GLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGAS Sbjct 181 GLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGAS 240 Query 363 AATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 AATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH Sbjct 241 AATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 282 >gi|341603761|emb|CCC66442.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=287 Score = 549 bits (1415), Expect = 3e-154, Method: Compositional matrix adjust. Identities = 281/282 (99%), Positives = 281/282 (99%), Gaps = 0/282 (0%) Query 123 LNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLT 182 LNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLT Sbjct 6 LNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLT 65 Query 183 FIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLA 242 FIKAGDPNNLLWRAFRPGTHVPIIDYTVPAP ESQYDTINIVGQYDIFSDPPNRPGNLLA Sbjct 66 FIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNLLA 125 Query 243 DLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMA 302 DLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMA Sbjct 126 DLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMA 185 Query 303 GLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGAS 362 GLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGAS Sbjct 186 GLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGAS 245 Query 363 AATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 404 AATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH Sbjct 246 AATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH 287 >gi|339296630|gb|AEJ48741.1| hypothetical protein CCDC5079_3552 [Mycobacterium tuberculosis CCDC5079] Length=253 Score = 494 bits (1272), Expect = 9e-138, Method: Compositional matrix adjust. Identities = 252/253 (99%), Positives = 253/253 (100%), Gaps = 0/253 (0%) Query 152 VAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVP 211 +AGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVP Sbjct 1 MAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVP 60 Query 212 APAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDI 271 APAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDI Sbjct 61 APAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDI 120 Query 272 TTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPA 331 TTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPA Sbjct 121 TTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPA 180 Query 332 VNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKAL 391 VNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKAL Sbjct 181 VNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKAL 240 Query 392 SMVRGLLPKGKKH 404 SMVRGLLPKGKKH Sbjct 241 SMVRGLLPKGKKH 253 >gi|296166954|ref|ZP_06849370.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897693|gb|EFG77283.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=363 Score = 486 bits (1251), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 250/365 (69%), Positives = 290/365 (80%), Gaps = 10/365 (2%) Query 40 VTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGA 99 + KLL GA+ GML + D +A+ADTALIVPGTAPSPYGPLRSLYHFNPAMQPQI A Sbjct 1 MNKLLAGAVVVGMLTWVTVFDDNVAAADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIDA 60 Query 100 NYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGT 159 NYY+P A R VV YPGSFWPVTGLNSPTV SSV+ G +NLDAAIR+TDGPI VAGLSQG+ Sbjct 61 NYYSPAAVRRVVPYPGSFWPVTGLNSPTVNSSVTTGADNLDAAIRTTDGPISVAGLSQGS 120 Query 160 LVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYD 219 L LDREQARLA+DPTAPPPG+LTFIKAG+P+NLL++AF PGTHVPIIDYTVP P +SQYD Sbjct 121 LALDREQARLAHDPTAPPPGRLTFIKAGNPDNLLYKAFGPGTHVPIIDYTVPPPVQSQYD 180 Query 220 TINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLG 279 TINIVGQYD FSDPPN PGNLLADLNA+AAGGYYGH+ATAFSDP+RVAP DIT TTNSLG Sbjct 181 TINIVGQYDPFSDPPNHPGNLLADLNAVAAGGYYGHTATAFSDPSRVAPWDITRTTNSLG 240 Query 280 ATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQ 339 T+TTYFIR +LPL RALVD AG+PP+A G +DAALRP++DRAY PG PA NP ++ Sbjct 241 GTSTTYFIRNSELPLARALVDGAGMPPEAVGPIDAALRPLVDRAYDPG--PAHNPVAMIN 298 Query 340 GIRGIPAIAPAIAIPI-GSTTGASAATSTAAATAAATNALRGANVGPGANKALSMVRGLL 398 GI IP I +++P+ G+ TG + AT++ A A G +G G +GLL Sbjct 299 GITHIPTIISTVSLPVRGALTGVNLATNSLALANLARAVAPGPRLGKGP-------KGLL 351 Query 399 PKGKK 403 PK + Sbjct 352 PKAVR 356 >gi|342860079|ref|ZP_08716731.1| hypothetical protein MCOL_14410 [Mycobacterium colombiense CECT 3035] gi|342132457|gb|EGT85686.1| hypothetical protein MCOL_14410 [Mycobacterium colombiense CECT 3035] Length=373 Score = 479 bits (1234), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 255/365 (70%), Positives = 278/365 (77%), Gaps = 6/365 (1%) Query 43 LLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYY 102 LL G+ A GMLA + GDG+ASADTALIVPGTAPSPYGPLRSLYHFNPA PQI ANYY Sbjct 4 LLAGSAAAGMLAVSMTFGDGVASADTALIVPGTAPSPYGPLRSLYHFNPATAPQIDANYY 63 Query 103 NPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVL 162 +P ATR V+SYP SFWPVTGLNSPTV SSV+ GTNNLDAAIR T GPI VAGLSQGTL L Sbjct 64 SPDATRRVISYPASFWPVTGLNSPTVDSSVNTGTNNLDAAIRGTGGPISVAGLSQGTLAL 123 Query 163 DREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTIN 222 DREQARLA DP APPP QLTFIKAGDPNNLL +AF PG HVPIIDYTVP P ESQY T+N Sbjct 124 DREQARLARDPGAPPPDQLTFIKAGDPNNLLAKAFGPGAHVPIIDYTVPQPVESQYRTVN 183 Query 223 IVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATT 282 IVGQYD FSDPPN PGNLLADLNAI AGGYYGHSATAFSDP+RVAP DI TNSLG TT Sbjct 184 IVGQYDPFSDPPNHPGNLLADLNAICAGGYYGHSATAFSDPSRVAPWDIRRETNSLGGTT 243 Query 283 TTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIR 342 TTYFIR QLPL RALVD AG+PP+A G +DAALRP+IDRAY PG PA NP ++ GI Sbjct 244 TTYFIRNPQLPLARALVDGAGMPPEAVGPIDAALRPLIDRAYDPG--PAHNPVQIINGIA 301 Query 343 GIPAIAPAIAIPIGSTTGASAATSTAAATAAATNAL----RGANVGPGANKALSMVRGLL 398 IP I A+ +P+ +T+ A S A A A + G VGP L +GLL Sbjct 302 HIPTIFTAVNVPLRATSWGLNAASGALGVANAARGVGALTSGPRVGPRVGPKLIKGKGLL 361 Query 399 PKGKK 403 P + Sbjct 362 PTAAR 366 >gi|339300228|gb|AEJ52338.1| hypothetical protein CCDC5180_3501 [Mycobacterium tuberculosis CCDC5180] Length=202 Score = 390 bits (1003), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%) Query 203 VPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSD 262 +PIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSD Sbjct 1 MPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSD 60 Query 263 PARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDR 322 PARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDR Sbjct 61 PARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDR 120 Query 323 AYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGAN 382 AYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGAN Sbjct 121 AYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGAN 180 Query 383 VGPGANKALSMVRGLLPKGKKH 404 VGPGANKALSMVRGLLPKGKKH Sbjct 181 VGPGANKALSMVRGLLPKGKKH 202 >gi|121639739|ref|YP_979963.1| hypothetical protein BCG_3884 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992234|ref|YP_002646924.1| hypothetical protein JTY_3886 [Mycobacterium bovis BCG str. Tokyo 172] gi|121495387|emb|CAL73874.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775350|dbj|BAH28156.1| hypothetical protein JTY_3886 [Mycobacterium bovis BCG str. Tokyo 172] gi|341603760|emb|CCC66441.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=122 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 120/122 (99%), Positives = 120/122 (99%), Gaps = 0/122 (0%) Query 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG 60 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLA AAILG Sbjct 1 MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLAYAAILG 60 Query 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV 120 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYY PTATRHVVSYPGSFWPV Sbjct 61 DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYTPTATRHVVSYPGSFWPV 120 Query 121 TG 122 TG Sbjct 121 TG 122 >gi|296170518|ref|ZP_06852104.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894830|gb|EFG74553.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=400 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 146/370 (40%), Positives = 186/370 (51%), Gaps = 39/370 (10%) Query 39 AVTKLLVGAIAGGMLACAAILGDGIASADTA----------------LIVPGTAPSPYGP 82 A+ KLL G A L G GIA+AD + VPG YG Sbjct 34 AMQKLLAGVTALVTLGATGCFGLGIATADDSPDGATPDEGMAYALGGAHVPGIPYDEYGR 93 Query 83 LRSLYHFNPAMQPQIGANYYNPTATRHVVS--YPG-----SFWPVTGLNSPTVGSSVSAG 135 F P ++ +I NY HV+ +PG +P G++ P++G SV+ G Sbjct 94 RLGAGWF-PGLKREI-VNYPAGQVQGHVLERLFPGIGRLDEAFPGLGVDGPSIGESVAVG 151 Query 136 TNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP------ 189 +NLDAAIR GP GLS+G+LV+D EQARLANDPTAPPP QL F G+P Sbjct 152 EDNLDAAIRRG-GPGAAIGLSEGSLVVDAEQARLANDPTAPPPNQLVFSTFGNPVGRHAF 210 Query 190 -NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIA 248 + L F G VP +DY +P P ESQYDT V YD+ +D P+RP NLLA N + Sbjct 211 GQSFLTSFFPVGAVVPAMDYRIPPPVESQYDTKAFVAAYDMIADFPDRPDNLLALANTL- 269 Query 249 AGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQA 308 G GH+A AF+DP+ V P++I TT NS GATTTTY I LPLV L G+P Sbjct 270 VGEATGHTAVAFTDPSMVPPQNIRTTVNSRGATTTTYLIPEKHLPLVIPL-GYLGVPEDE 328 Query 309 AGTVDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAPAIAIPIGSTTGASAATS 366 +DA L P+++ Y P P D V+G IAPA G GA + Sbjct 329 LNQLDAELAPMVNAGYSRNDDPQTAPIQVDPVRGFDPAAVIAPASQATFGG--GADPFSQ 386 Query 367 TAAATAAATN 376 ++ AA N Sbjct 387 LMSSAMAAFN 396 >gi|15840627|ref|NP_335664.1| hypothetical protein MT1221 [Mycobacterium tuberculosis CDC1551] gi|254231451|ref|ZP_04924778.1| hypothetical exported protein [Mycobacterium tuberculosis C] gi|298524681|ref|ZP_07012090.1| hypothetical protein TBAG_00098 [Mycobacterium tuberculosis 94_M4241A] 6 more sequence titles Length=371 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 119/283 (43%), Positives = 155/283 (55%), Gaps = 37/283 (13%) Query 96 QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSAGTNNLDAAIRS 145 Q G+ Y+ P A ++ YP S+WP L ++ TVG +V GTN+LD AI Sbjct 84 QAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHH 142 Query 146 TDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFR 198 P GLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F Sbjct 143 GTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFP 202 Query 199 PGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHS 256 PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA NA H+ Sbjct 203 PGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIGAA-IAHT 261 Query 257 ATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAAL 316 F+ P V P++I TT NS GATTTTY + + LPL L + G+ +D+ L Sbjct 262 PIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMSDAEVDQIDSVL 320 Query 317 RPIIDRAY--------QP-------GPAPAVNPRDLVQGIRGI 344 +P ID AY +P G P P +V+G RG+ Sbjct 321 QPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGL 363 >gi|15608324|ref|NP_215700.1| hypothetical protein Rv1184c [Mycobacterium tuberculosis H37Rv] gi|31792377|ref|NP_854870.1| hypothetical protein Mb1216c [Mycobacterium bovis AF2122/97] gi|121637115|ref|YP_977338.1| hypothetical protein BCG_1246c [Mycobacterium bovis BCG str. Pasteur 1173P2] 38 more sequence titles Length=359 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 119/283 (43%), Positives = 155/283 (55%), Gaps = 37/283 (13%) Query 96 QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSAGTNNLDAAIRS 145 Q G+ Y+ P A ++ YP S+WP L ++ TVG +V GTN+LD AI Sbjct 72 QAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHH 130 Query 146 TDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFR 198 P GLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F Sbjct 131 GTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFP 190 Query 199 PGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHS 256 PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA NA H+ Sbjct 191 PGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIGAA-IAHT 249 Query 257 ATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAAL 316 F+ P V P++I TT NS GATTTTY + + LPL L + G+ +D+ L Sbjct 250 PIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMSDAEVDQIDSVL 308 Query 317 RPIIDRAY--------QP-------GPAPAVNPRDLVQGIRGI 344 +P ID AY +P G P P +V+G RG+ Sbjct 309 QPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGL 351 >gi|308370035|ref|ZP_07420076.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu002] gi|308371896|ref|ZP_07426590.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu004] gi|308374244|ref|ZP_07435301.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu006] 15 more sequence titles Length=316 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 119/283 (43%), Positives = 156/283 (56%), Gaps = 37/283 (13%) Query 96 QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSAGTNNLDAAIRS 145 Q G+ Y+ P A ++ YP S+WP L ++ TVG +V GTN+LD AI Sbjct 29 QAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHH 87 Query 146 TDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFR 198 P GLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F Sbjct 88 GTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFP 147 Query 199 PGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHS 256 PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA + A G H+ Sbjct 148 PGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLA-VANAAIGAAIAHT 206 Query 257 ATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAAL 316 F+ P V P++I TT NS GATTTTY + + LPL L + G+ +D+ L Sbjct 207 PIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMSDAEVDQIDSVL 265 Query 317 RPIIDRAY--------QP-------GPAPAVNPRDLVQGIRGI 344 +P ID AY +P G P P +V+G RG+ Sbjct 266 QPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGL 308 >gi|253799773|ref|YP_003032774.1| hypothetical protein TBMG_02798 [Mycobacterium tuberculosis KZN 1435] gi|289555028|ref|ZP_06444238.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 605] gi|297633731|ref|ZP_06951511.1| hypothetical protein MtubK4_06399 [Mycobacterium tuberculosis KZN 4207] 6 more sequence titles Length=359 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 119/283 (43%), Positives = 155/283 (55%), Gaps = 37/283 (13%) Query 96 QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSAGTNNLDAAIRS 145 Q G+ Y+ P A ++ YP S+WP L ++ TVG +V GTN+LD AI Sbjct 72 QAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHH 130 Query 146 TDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFR 198 P GLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F Sbjct 131 GTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFP 190 Query 199 PGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHS 256 PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA NA H+ Sbjct 191 PGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIGAA-IAHT 249 Query 257 ATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAAL 316 F+ P V P++I TT NS GATTTTY + + LPL L + G+ +D+ L Sbjct 250 PIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GISDAEVDQIDSVL 308 Query 317 RPIIDRAY--------QP-------GPAPAVNPRDLVQGIRGI 344 +P ID AY +P G P P +V+G RG+ Sbjct 309 QPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGL 351 >gi|146760143|emb|CAJ77664.1| PE protein [Mycobacterium chelonae] Length=388 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 109/241 (46%), Positives = 138/241 (58%), Gaps = 12/241 (4%) Query 119 PVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPP 178 P GL+ P++G S+ G NL+ AIR T GP GLS+G LVL+ ++ LA+DPTAP P Sbjct 118 PGLGLDGPSIGESIDVGEPNLENAIR-TGGPGTAMGLSEGALVLNAVKSALASDPTAPAP 176 Query 179 GQLTFIKAGDP-------NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFS 231 LTF GDP + L + F PG+ VP +DYTVPAP ESQY T + YD + Sbjct 177 DSLTFATFGDPVARHPFGESFLTQNFAPGSVVPFMDYTVPAPVESQYHTDQFISAYDSIA 236 Query 232 DPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQ 291 D P+RP NL A NAI AG GH+A AF++P V P++I T NS G TTTTYFI Sbjct 237 DWPDRPDNLFAVANAI-AGLATGHTAIAFTNPKMVPPQNIRTEVNSRGGTTTTYFIPEQH 295 Query 292 LPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAP 349 LPLV + G+P + +DA L+P +D Y PA P D V+G AP Sbjct 296 LPLVLGFKYL-GVPEETLNRLDAILQPRVDAGYSRNDDPATAPIAVDPVRGFDPAKVTAP 354 Query 350 A 350 A Sbjct 355 A 355 >gi|308231766|ref|ZP_07413691.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu001] gi|308370648|ref|ZP_07422224.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu003] gi|308373064|ref|ZP_07430895.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu005] gi|308216155|gb|EFO75554.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu001] gi|308331340|gb|EFP20191.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu003] gi|308338964|gb|EFP27815.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu005] Length=299 Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 119/283 (43%), Positives = 156/283 (56%), Gaps = 37/283 (13%) Query 96 QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSAGTNNLDAAIRS 145 Q G+ Y+ P A ++ YP S+WP L ++ TVG +V GTN+LD AI Sbjct 12 QAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHH 70 Query 146 TDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFR 198 P GLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F Sbjct 71 GTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFP 130 Query 199 PGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHS 256 PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA + A G H+ Sbjct 131 PGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLA-VANAAIGAAIAHT 189 Query 257 ATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAAL 316 F+ P V P++I TT NS GATTTTY + + LPL L + G+ +D+ L Sbjct 190 PIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMSDAEVDQIDSVL 248 Query 317 RPIIDRAY--------QP-------GPAPAVNPRDLVQGIRGI 344 +P ID AY +P G P P +V+G RG+ Sbjct 249 QPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGL 291 >gi|41408332|ref|NP_961168.1| hypothetical protein MAP2234 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396688|gb|AAS04551.1| hypothetical protein MAP_2234 [Mycobacterium avium subsp. paratuberculosis K-10] Length=376 Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 115/281 (41%), Positives = 145/281 (52%), Gaps = 31/281 (11%) Query 98 GANYYNPTATRHVVSYPG-------------------SFWPVTGLNSPTVGSSVSAGTNN 138 GA+++ P R +V YP +P G+N P+VG SV+ G +N Sbjct 67 GADWF-PGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMNGPSVGESVAEGIDN 125 Query 139 LDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP-------NN 191 LDAAIR+T P GLS+G V+D EQARLANDPTAPPP L F GDP + Sbjct 126 LDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATFGDPIGRHAFGQS 185 Query 192 LLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGG 251 L F G+ VP +DYT+P P ESQYDT V YD +D P+RP N+ A N + G Sbjct 186 FLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANTL-MGL 244 Query 252 YYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGT 311 GH+A AF++P+ V P++I TT NS GA TT I LPLV L G+ Sbjct 245 ATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPL-RYIGIDENTLNK 303 Query 312 VDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAPA 350 +DA L P ++ Y PA P D V G APA Sbjct 304 LDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPA 344 >gi|336458231|gb|EGO37212.1| PE-PPE domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=376 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 114/281 (41%), Positives = 144/281 (52%), Gaps = 31/281 (11%) Query 98 GANYYNPTATRHVVSYPG-------------------SFWPVTGLNSPTVGSSVSAGTNN 138 GA+++ P R +V YP +P G+N P+VG SV+ G +N Sbjct 67 GADWF-PGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMNGPSVGESVAEGIDN 125 Query 139 LDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP-------NN 191 LDAAIR+T P GLS+G V+D EQARLANDPTAPPP L F GDP + Sbjct 126 LDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATFGDPIGRHAFGQS 185 Query 192 LLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGG 251 L F G+ VP +DYT+P P ESQYDT V YD +D P+RP N+ A N + G Sbjct 186 FLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANTL-MGL 244 Query 252 YYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGT 311 GH+ AF++P+ V P++I TT NS GA TT I LPLV L G+ Sbjct 245 ATGHTTVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPL-KYIGIDENTLNK 303 Query 312 VDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAPA 350 +DA L P ++ Y PA P D V G APA Sbjct 304 LDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPA 344 >gi|254774576|ref|ZP_05216092.1| hypothetical protein MaviaA2_07893 [Mycobacterium avium subsp. avium ATCC 25291] Length=369 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 114/281 (41%), Positives = 145/281 (52%), Gaps = 31/281 (11%) Query 98 GANYYNPTATRHVVSYPG-------------------SFWPVTGLNSPTVGSSVSAGTNN 138 GA+++ P R +V YP +P G++ P+VG SV+ G +N Sbjct 60 GADWF-PGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMDGPSVGESVAEGIDN 118 Query 139 LDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP-------NN 191 LDAAIR+T P GLS+G V+D EQARLANDPTAPPP L F GDP + Sbjct 119 LDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATFGDPIGRHAFGQS 178 Query 192 LLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGG 251 L F G+ VP +DYT+P P ESQYDT V YD +D P+RP N+ A N + G Sbjct 179 FLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANTL-MGL 237 Query 252 YYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGT 311 GH+A AF++P+ V P++I TT NS GA TT I LPLV L G+ Sbjct 238 ATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPL-KYIGIDENTLNK 296 Query 312 VDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAPA 350 +DA L P ++ Y PA P D V G APA Sbjct 297 LDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPA 337 >gi|118462506|ref|YP_880985.1| hypothetical protein MAV_1760 [Mycobacterium avium 104] gi|118163793|gb|ABK64690.1| conserved hypothetical protein [Mycobacterium avium 104] Length=376 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 114/281 (41%), Positives = 145/281 (52%), Gaps = 31/281 (11%) Query 98 GANYYNPTATRHVVSYPG-------------------SFWPVTGLNSPTVGSSVSAGTNN 138 GA+++ P R +V YP +P G++ P+VG SV+ G +N Sbjct 67 GADWF-PGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMDGPSVGESVAEGIDN 125 Query 139 LDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP-------NN 191 LDAAIR+T P GLS+G V+D EQARLANDPTAPPP L F GDP + Sbjct 126 LDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATFGDPIGRHAFGQS 185 Query 192 LLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGG 251 L F G+ VP +DYT+P P ESQYDT V YD +D P+RP N+ A N + G Sbjct 186 FLTAMFGVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANTL-MGL 244 Query 252 YYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGT 311 GH+A AF++P+ V P++I TT NS GA TT I LPLV L G+ Sbjct 245 ATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPL-KYIGIDENTLNK 303 Query 312 VDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAPA 350 +DA L P ++ Y PA P D V G APA Sbjct 304 LDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPA 344 >gi|466805|gb|AAA17081.1| Lepb1170_F3_112 [Mycobacterium leprae] Length=391 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 107/266 (41%), Positives = 142/266 (54%), Gaps = 25/266 (9%) Query 82 PLRSLYHFNPAMQPQIGANYYN--------PTATRHVVSYPGS----FWPVTGLNSP--- 126 P + +Y A P +YY P R ++ YP + P + P Sbjct 79 PAKIVYALGGARPPTFDWDYYTIRAGDEFFPDVNRKLIDYPARAPFRYVPTFLVPGPRDE 138 Query 127 -TVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIK 185 T+G +++ T NL+ AI P V GLSQG+L LD EQ +LA DPTAPPP QLTF Sbjct 139 VTIGEAIAVATKNLNQAIHRGTEPAAVVGLSQGSLALDTEQEQLATDPTAPPPDQLTFNT 198 Query 186 AGDPN-------NLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPG 238 GDP+ ++L FRPG ++P+IDYT+P +SQYD+ +V YD S+ P+R Sbjct 199 FGDPSGYHGFGKSVLASIFRPGDYIPLIDYTMPQRMDSQYDSNRVVAAYDGLSEFPDRAD 258 Query 239 NLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRAL 298 NLLA LN AGG H+ + F +P V P++I TT NS GA TTTY I + LPL L Sbjct 259 NLLAQLNCF-AGGAISHTPSGFFNPEDVPPQNIRTTVNSRGAKTTTYLIPVNHLPLTLPL 317 Query 299 VDMAGLPPQAAGTVDAALRPIIDRAY 324 + G +DA L+P ID AY Sbjct 318 RYL-GWSDALVDQIDAVLQPKIDAAY 342 >gi|342857529|ref|ZP_08714185.1| hypothetical protein MCOL_01595 [Mycobacterium colombiense CECT 3035] gi|342134862|gb|EGT88028.1| hypothetical protein MCOL_01595 [Mycobacterium colombiense CECT 3035] Length=317 Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 103/238 (44%), Positives = 130/238 (55%), Gaps = 17/238 (7%) Query 102 YNPTATRHVVSYPGSF---WPVTGL-----NSPTVGSSVSAGTNNLDAAIRSTDGPIFVA 153 Y P A R +V YP W L + +VG ++ ++LD +R+ P V Sbjct 34 YFPNAKREIVEYPAGALYGWVPQELFPGPRDKMSVGQAIDQAADSLDQTVRNATEPGAVV 93 Query 154 GLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP-------NNLLWRAFRPGTHVPII 206 LSQG L LD+EQARLANDP APPP +L F GDP + F+P +P I Sbjct 94 ALSQGNLALDQEQARLANDPKAPPPDKLQFTTLGDPVGTHAFGASFASGIFKPADTIPFI 153 Query 207 DYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARV 266 YT+P P ESQYDT IV YD F+D P+RP NLLADLNA+ A H+ AF+ P V Sbjct 154 GYTMPQPVESQYDTNRIVAAYDGFADFPDRPDNLLADLNAVVATTVV-HTPAAFTGPGIV 212 Query 267 APRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 P++I TT NS GA TTTY + + LPL L + G +DAAL+P ID Y Sbjct 213 PPQNIRTTVNSRGAKTTTYLVPVNHLPLTLGLRYL-GWSDNLVNQIDAALQPQIDAGY 269 >gi|120401302|ref|YP_951131.1| hypothetical protein Mvan_0276 [Mycobacterium vanbaalenii PYR-1] gi|119954120|gb|ABM11125.1| PE-PPE, C-terminal domain protein [Mycobacterium vanbaalenii PYR-1] Length=388 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 124/326 (39%), Positives = 164/326 (51%), Gaps = 44/326 (13%) Query 39 AVTKLLVGAIAGGMLACAAILGDGIASADTALIVP-----GTAPSPYGPLRSLYHFNPAM 93 A+ +LL A + A LG GIA+AD A VP AP P G Y A Sbjct 12 AMKRLLAFGTALTTIGAAGCLGFGIAAADEAPAVPPSPTPADAPPPLGTPGRAYALGGAH 71 Query 94 QPQI---------GANYYNPTATRHVVSYPG-------------------SFWPVTGLNS 125 I GA+++ P R +V YP +P G++ Sbjct 72 VLGIPYDEYIMRTGADWF-PGLDRQIVDYPAGQVQGHTLERLFPGIGRLDDSFPGIGIDG 130 Query 126 PTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIK 185 P+VG SV GT N+ AIR G GLS+G +VL+ QA+LA DP APPP QL+F Sbjct 131 PSVGESVDVGTPNVITAIRE-GGRGTAIGLSEGAMVLNDVQAKLAYDPAAPPPDQLSFAM 189 Query 186 AGDP-------NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPG 238 GDP + L + F G+ VP +DY +P P ESQYDT V YD +D P+RP Sbjct 190 YGDPVARHAFGESFLTQNFPVGSVVPSLDYRIPPPVESQYDTYQFVSAYDSIADWPDRPD 249 Query 239 NLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRAL 298 N ++ NAI G GH+A AF++P+ V P++I TT NS GA TTTY I + LPLV Sbjct 250 NWISVANAI-VGLATGHTAVAFTEPSMVPPQNIRTTVNSRGAKTTTYMIPEEHLPLVLPF 308 Query 299 VDMAGLPPQAAGTVDAALRPIIDRAY 324 + G+P + +DA L+P +D Y Sbjct 309 KYL-GVPTETLIELDAVLKPFVDAGY 333 >gi|15827630|ref|NP_301893.1| hypothetical protein ML1232 [Mycobacterium leprae TN] gi|221230107|ref|YP_002503523.1| hypothetical protein MLBr_01232 [Mycobacterium leprae Br4923] gi|13093181|emb|CAC31613.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933214|emb|CAR71327.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=358 Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 107/266 (41%), Positives = 142/266 (54%), Gaps = 25/266 (9%) Query 82 PLRSLYHFNPAMQPQIGANYYN--------PTATRHVVSYPGS----FWPVTGLNSP--- 126 P + +Y A P +YY P R ++ YP + P + P Sbjct 46 PAKIVYALGGARPPTFDWDYYTIRAGDEFFPDVNRKLIDYPARAPFRYVPTFLVPGPRDE 105 Query 127 -TVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIK 185 T+G +++ T NL+ AI P V GLSQG+L LD EQ +LA DPTAPPP QLTF Sbjct 106 VTIGEAIAVATKNLNQAIHRGTEPAAVVGLSQGSLALDTEQEQLATDPTAPPPDQLTFNT 165 Query 186 AGDPN-------NLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPG 238 GDP+ ++L FRPG ++P+IDYT+P +SQYD+ +V YD S+ P+R Sbjct 166 FGDPSGYHGFGKSVLASIFRPGDYIPLIDYTMPQRMDSQYDSNRVVAAYDGLSEFPDRAD 225 Query 239 NLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRAL 298 NLLA LN AGG H+ + F +P V P++I TT NS GA TTTY I + LPL L Sbjct 226 NLLAQLNCF-AGGAISHTPSGFFNPEDVPPQNIRTTVNSRGAKTTTYLIPVNHLPLTLPL 284 Query 299 VDMAGLPPQAAGTVDAALRPIIDRAY 324 + G +DA L+P ID AY Sbjct 285 RYL-GWSDALVDQIDAVLQPKIDAAY 309 >gi|145221005|ref|YP_001131683.1| hypothetical protein Mflv_0401 [Mycobacterium gilvum PYR-GCK] gi|315442023|ref|YP_004074902.1| PE-PPE domain-containing protein [Mycobacterium sp. Spyr1] gi|145213491|gb|ABP42895.1| PE-PPE, C-terminal domain protein [Mycobacterium gilvum PYR-GCK] gi|315260326|gb|ADT97067.1| PE-PPE domain-containing protein [Mycobacterium sp. Spyr1] Length=380 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 111/266 (42%), Positives = 139/266 (53%), Gaps = 31/266 (11%) Query 96 QIGANYYNPTATRHVVSYP----------------GSFW----PVTGLNSPTVGSSVSAG 135 + GA+++ P R +V YP G+F P GL+ P+ G S+ G Sbjct 74 RTGADWF-PGLDREIVDYPAGQVQGHTLERLFPGIGAFGDRIAPGLGLDGPSYGESIDVG 132 Query 136 TNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP------ 189 NL AIR GP GLS+G VLD QARLA DP APPP QL+F G+P Sbjct 133 APNLIGAIRR-GGPGTAIGLSEGASVLDEVQARLAYDPAAPPPDQLSFATYGNPVGKHAF 191 Query 190 -NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIA 248 + L + F G+ VP +DY +PAP ESQYDT V YD +D P+RP N L+ NAI Sbjct 192 GESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYKFVSAYDSIADWPDRPDNWLSVANAI- 250 Query 249 AGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQA 308 G GH+A AF+DP+ V R+I TT NS GATTTTY I + LPLV G+P Sbjct 251 VGLATGHTAVAFTDPSMVPERNIRTTVNSRGATTTTYMIPEEHLPLVLPF-KYLGVPKDT 309 Query 309 AGTVDAALRPIIDRAYQPGPAPAVNP 334 +D L P +D Y PA P Sbjct 310 LMELDKVLLPYVDAGYSRNDDPATAP 335 >gi|169628033|ref|YP_001701682.1| hypothetical protein MAB_0936c [Mycobacterium abscessus ATCC 19977] gi|146760176|emb|CAJ77673.1| PE protein [Mycobacterium abscessus] gi|169240000|emb|CAM61028.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=388 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/229 (46%), Positives = 132/229 (58%), Gaps = 15/229 (6%) Query 119 PVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPP 178 P GL+ P++G S+ G NL+ AIRS GP GLS+G LVL+ + LA DPTAP P Sbjct 118 PGLGLDGPSIGESIDIGEPNLENAIRS-GGPGTAMGLSEGALVLNAVKNALATDPTAPEP 176 Query 179 GQLTFIKAGDP-------NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFS 231 LTF GDP + L + F PG+ VP +DY VPA +SQY T + YD + Sbjct 177 ESLTFATFGDPIAKSPFSESFLTQNFAPGSVVPFMDYPVPARVDSQYHTDQFISAYDSIA 236 Query 232 DPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQ 291 D P+RP NL A NAI AG GH+A AF++P V R+I T TNS G TTTTYFI Sbjct 237 DWPDRPDNLFALANAI-AGLATGHTAVAFTNPKMVPARNIVTETNSRGGTTTTYFIPEQH 295 Query 292 LPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY----QPGPAP-AVNPR 335 LPLV + G+P + +DA L+P +D Y P AP AV+PR Sbjct 296 LPLVMGFKYL-GVPEETLNRLDAILQPRVDAGYSRNDDPATAPIAVDPR 343 >gi|254819857|ref|ZP_05224858.1| hypothetical protein MintA_08029 [Mycobacterium intracellulare ATCC 13950] Length=375 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 112/283 (40%), Positives = 142/283 (51%), Gaps = 32/283 (11%) Query 96 QIGANYYNPTATRHVVSYPG-------------------SFWPVTGLNSPTVGSSVSAGT 136 Q GA ++ P R +V YP +P G + P+VG SV G Sbjct 65 QEGAQWF-PGQKREIVRYPAGQVQGHVLERLFPGIGKLDEQFPGLGADGPSVGESVDVGI 123 Query 137 NNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP------- 189 +NLDAAIR T P GLS+G V+D QARLANDPTAPPP +L F GDP Sbjct 124 DNLDAAIR-TGRPGTAIGLSEGAFVVDGVQARLANDPTAPPPDKLNFATFGDPIGRHAFG 182 Query 190 NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAA 249 + L F G+ VP +DYT+P P ESQYDT V YD +D P+RP N+ A N + Sbjct 183 QSFLTAMFPVGSVVPALDYTMPPPYESQYDTNRFVAAYDSIADFPDRPDNMFALANTL-L 241 Query 250 GGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAA 309 G GH+A AF++P+ V P++I TT NS GA TT + LPLV L G+ Sbjct 242 GLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMVPEKHLPLVMPL-KYVGIDEDTL 300 Query 310 GTVDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAPA 350 +DA L P ++ Y P+ P D V G APA Sbjct 301 NKLDAILIPRVNAGYSRNDDPSTAPVQVDPVHGFDPAEVTAPA 343 >gi|108797228|ref|YP_637425.1| PE-PPE-like protein [Mycobacterium sp. MCS] gi|119866313|ref|YP_936265.1| hypothetical protein Mkms_0258 [Mycobacterium sp. KMS] gi|108767647|gb|ABG06369.1| PE-PPE-like protein [Mycobacterium sp. MCS] gi|119692402|gb|ABL89475.1| PE-PPE, C-terminal domain protein [Mycobacterium sp. KMS] Length=377 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 101/248 (41%), Positives = 135/248 (55%), Gaps = 12/248 (4%) Query 118 WPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPP 177 +P G++ P+VG SV GT N+ A+R G GLS+G +VL+ QA+LA DP APP Sbjct 110 FPGLGIDGPSVGESVDVGTPNVINAVREG-GRGTAIGLSEGAMVLNDVQAKLAYDPAAPP 168 Query 178 PGQLTFIKAGDP-------NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIF 230 P +L+F GDP + L + F G+ VP +DY +PAP ESQYDT + V YD Sbjct 169 PDELSFAMYGDPVARHAFGESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYHFVSAYDSI 228 Query 231 SDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTD 290 +D P+RP N ++ NAI G GH+A AF++P+ V R+I TT NS GA TTT+ I + Sbjct 229 ADWPDRPDNWISVANAI-VGLATGHTAVAFTEPSMVPERNIRTTVNSRGAKTTTFMIPEE 287 Query 291 QLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIA 348 LPLV G+P +D+ L+P +D Y P P D V G A Sbjct 288 HLPLVLPF-KYLGVPKDTLMELDSVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAEVTA 346 Query 349 PAIAIPIG 356 PA G Sbjct 347 PATQAAFG 354 >gi|126432851|ref|YP_001068542.1| hypothetical protein Mjls_0238 [Mycobacterium sp. JLS] gi|126232651|gb|ABN96051.1| PE-PPE, C-terminal domain protein [Mycobacterium sp. JLS] Length=377 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 101/248 (41%), Positives = 135/248 (55%), Gaps = 12/248 (4%) Query 118 WPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPP 177 +P G++ P+VG SV GT N+ A+R G GLS+G +VL+ QA+LA DP APP Sbjct 110 FPGLGIDGPSVGESVDVGTPNVINAVREG-GRGTAIGLSEGAMVLNDVQAKLAYDPAAPP 168 Query 178 PGQLTFIKAGDP-------NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIF 230 P +L+F GDP + L + F G+ VP +DY +PAP ESQYDT + V YD Sbjct 169 PDELSFAMYGDPVARHAFGESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYHFVSAYDSI 228 Query 231 SDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTD 290 +D P+RP N ++ NAI G GH+A AF++P+ V R+I TT NS GA TTT+ I + Sbjct 229 ADWPDRPDNWISVANAI-VGLATGHTAVAFTEPSMVPERNIRTTVNSRGAQTTTFMIPEE 287 Query 291 QLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIA 348 LPLV G+P +D+ L+P +D Y P P D V G A Sbjct 288 HLPLVLPF-KYLGVPKDTLMELDSVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAEVTA 346 Query 349 PAIAIPIG 356 PA G Sbjct 347 PATQAAFG 354 >gi|118471696|ref|YP_884825.1| hypothetical protein MSMEG_0412 [Mycobacterium smegmatis str. MC2 155] gi|85541018|gb|ABC70855.1| PE [Mycobacterium smegmatis str. MC2 155] gi|118172983|gb|ABK73879.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=383 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 111/293 (38%), Positives = 143/293 (49%), Gaps = 33/293 (11%) Query 96 QIGANYYNPTATRHVVSYPGS--------------------FWPVTGLNSPTVGSSVSAG 135 + GA+++ P R +V YP F P GL+ P+ G S+ G Sbjct 73 RTGADWF-PGLDRQIVDYPAGQVQGHTLERLFPGIGALGERFMPGLGLDGPSYGESIDVG 131 Query 136 TNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDP------ 189 NL AIR GP V GLS+G VLD QARLA DP APPP L+F G+P Sbjct 132 APNLINAIRQG-GPGTVIGLSEGASVLDEVQARLAYDPAAPPPDSLSFATYGNPVGKHAF 190 Query 190 -NNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIA 248 + L + F G+ VP +DY +PAP ESQYDT V YD +D P+RP N ++ NAI Sbjct 191 GESFLTQMFPVGSVVPSLDYRIPAPVESQYDTYQFVSAYDSIADWPDRPDNWISVANAI- 249 Query 249 AGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQA 308 G GH+A AF++P+ V P++I TT NS GA TT I + LPLV + G+ Sbjct 250 VGLATGHTAVAFTNPSMVPPQNIRTTVNSRGAKDTTIMIPEEHLPLVLPFKYL-GVDKDT 308 Query 309 AGTVDAALRPIIDRAYQPGPAPAVNP--RDLVQGIRGIPAIAPAIAIPIGSTT 359 +D L+P +D Y P P D V G APA G T Sbjct 309 LNKLDGVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAAVTAPATQAAFGGGT 361 >gi|289572191|ref|ZP_06452418.1| PPE family protein [Mycobacterium tuberculosis K85] gi|339633537|ref|YP_004725179.1| PPE family protein [Mycobacterium africanum GM041182] gi|289536622|gb|EFD41200.1| PPE family protein [Mycobacterium tuberculosis K85] gi|339332893|emb|CCC28620.1| PPE family protein [Mycobacterium africanum GM041182] Length=479 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 103/271 (39%), Positives = 147/271 (55%), Gaps = 15/271 (5%) Query 64 ASADTALIVPGTAPSPYGPL-----RSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFW 118 +S T + VPG +P L R L + IG N++ P T VVSYP + Sbjct 196 SSTTTRITVPGASPVHAATLLPFIGRLLAARYAELNTAIGTNWF-PGTTPEVVSYPATIG 254 Query 119 PVTG-LNSPTVGSSVSAGTNNLDAAI---RSTDGPIFVAGLSQGTLVLDREQARLANDPT 174 ++G L + S++ G L I ++ P+ VAGLS G++V+DRE A LA DP Sbjct 255 VLSGSLGAVDANQSIAIGQQMLHNEILAATASGQPVTVAGLSMGSMVIDRELAYLAIDPN 314 Query 175 APPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDP 233 APP LTF++ P L + + P GT +PI YTV ESQY+T + QYDI++DP Sbjct 315 APPSSALTFVELAGPERGLAQTYLPVGTTIPIAGYTVGNAPESQYNTSVVYSQYDIWADP 374 Query 234 PNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLP 293 P+RP NLLA NA+ Y+ H TA++ P + +I T+SLG TTT Y I + LP Sbjct 375 PDRPWNLLAGANALMGAAYF-HDLTAYAAPQQ--GIEIAAVTSSLGGTTTMYMIPSPTLP 431 Query 294 LVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 L+ L + G+P G ++ L+P++D Y Sbjct 432 LLLPLKQI-GVPDWIVGGLNNVLKPLVDAGY 461 >gi|240171670|ref|ZP_04750329.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478] Length=462 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/237 (38%), Positives = 136/237 (58%), Gaps = 16/237 (6%) Query 97 IGANYYNPTATRHVVSYPGSFWPVTG-LNSPTVGSSVSAGTNNLDAAIRS-----TDGPI 150 IG N++ P T +V+YP S ++G L +PT +V+ G L+ I + + P+ Sbjct 191 IGQNWF-PGTTAQLVNYPASIGILSGSLAAPTTNDAVAMGQRALNDQIMNAFANGSGSPV 249 Query 151 FVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYT 209 +AGLS+GT+V++RE A LA +P+APPP L F P L + P G VP+I+YT Sbjct 250 HIAGLSEGTIVVNRELAYLAANPSAPPPHALQFAMFSSPELGLANIYLPNGMTVPLINYT 309 Query 210 VPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSAT--AFSDPARVA 267 V +QYD + GQYD + +PP+RP NL A +N++ YY ++A+ + SD +V Sbjct 310 VQGLPNTQYDVSVVYGQYDFWGNPPDRPWNLPAAVNSLFGAAYYHNTASLASLSDAVQV- 368 Query 268 PRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 ++TT SLG TTY I LP++ L D+ G+P T+++ L+PI++ Y Sbjct 369 ----SSTTTSLGGAITTYMIPAPTLPMLLPLKDI-GVPQPIVDTLNSVLQPIVNDGY 420 >gi|183984907|ref|YP_001853198.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178233|gb|ACC43343.1| PE-PGRS family protein [Mycobacterium marinum M] Length=463 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 87/236 (37%), Positives = 132/236 (56%), Gaps = 12/236 (5%) Query 97 IGANYYNPTATRHVVSYPGSFWPVTG-LNSPTVGSSVSAGTNNLDAAIRS--TDG---PI 150 IG N++ P V++YP S ++G L +P ++V+ G L I S T+G P+ Sbjct 192 IGENWF-PDTIASVINYPASIGILSGSLAAPDTNTAVAIGARMLHEQIMSAVTNGSGLPV 250 Query 151 FVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYT 209 VA LSQGT+V +RE A LA DP APP L F G P L + P G VP+I+YT Sbjct 251 HVATLSQGTIVANRELAYLATDPNAPPAHALEFALFGSPELGLAHIYLPDGLTVPLINYT 310 Query 210 VPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPR 269 V + +QYD + GQYD + +PP+RP NL A +N++ YY H+ ++F+ + Sbjct 311 VHGLSNTQYDVSVVNGQYDFWGNPPDRPWNLPAWVNSLFGAAYY-HNTSSFASLSDAV-- 367 Query 270 DITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAYQ 325 ++++ T SLG T TTY I + LP++ L + G+P +++ L PI++ Y Sbjct 368 EVSSVTTSLGGTITTYLIPSPTLPMLLPL-EQIGVPAPIVAGLNSVLAPIVNDGYS 422 >gi|120401776|ref|YP_951605.1| hypothetical protein Mvan_0761 [Mycobacterium vanbaalenii PYR-1] gi|119954594|gb|ABM11599.1| PE-PPE, C-terminal domain protein [Mycobacterium vanbaalenii PYR-1] Length=401 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/298 (34%), Positives = 147/298 (50%), Gaps = 32/298 (10%) Query 40 VTKLLVGAIAGGMLACAAILGDG-----IASADTALIVPGTAPSPYGPLRSLYHFNPAMQ 94 V + LV IA + +LG G +++A+ A+++PG SP+ P+ Y A Sbjct 4 VRRWLVPLIA----LVSVLLGIGTAANPVSAAEEAVLIPGA--SPFKPINPFYPIIAATY 57 Query 95 PQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAG 154 IG N ++ A +V Y N + ++ G D A+R DG + V G Sbjct 58 RYIGINLHD-DADAQLVDY--------SQNPFSTDRALLDGVERADVAVREIDGQVVVIG 108 Query 155 LSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPA 214 S G++V R A LA+ P P P + F+ P + + F+ GT +P+++YTV A Sbjct 109 ESMGSMVASRLAADLAHSPDPPSPDDIRFVLIASPEEGVAQYFKEGTRIPLLNYTVSRVA 168 Query 215 ESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFS-DPARVAPRDITT 273 +S Y T + G+YD ++DPP+RP NL+A NA A G Y H + D + V P +IT Sbjct 169 QSPYPTTVVFGEYDGWADPPDRPWNLVAVANA-AMGLIYVHGPAMWDVDLSDVPPENIT- 226 Query 274 TTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY----QPG 327 + T T YF+ T+ LPL R D+ G+P D LRPIID Y QPG Sbjct 227 ----VDGTVTRYFVPTEHLPLTRPFRDL-GVPDCLVDAADHILRPIIDAGYRRHDQPG 279 >gi|340628503|ref|YP_004746955.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006693|emb|CCC45881.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=479 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 104/271 (39%), Positives = 148/271 (55%), Gaps = 15/271 (5%) Query 64 ASADTALIVPGTAPSPYGPL-----RSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFW 118 +S T + VPG +P L R L + IG N++ P T VVSYP + Sbjct 196 SSTTTRITVPGASPVHAATLLPFIGRLLAARYAELNTAIGTNWF-PGTTPEVVSYPATIG 254 Query 119 PVTG-LNSPTVGSSVSAGTNNLDAAI---RSTDGPIFVAGLSQGTLVLDREQARLANDPT 174 ++G L + S++ G L I ++ P+ VAGLS G++V+DRE A LA DP Sbjct 255 VLSGSLGAVDANQSIAIGQQMLHNEILAATASGQPVTVAGLSMGSMVIDRELAYLATDPN 314 Query 175 APPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDP 233 APP LTF++ P L + + P GT +PI YTV ESQY+T + QYDI++DP Sbjct 315 APPSSALTFVELAGPERGLAQTYLPVGTTIPIAGYTVGNAPESQYNTSVVYSQYDIWADP 374 Query 234 PNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLP 293 P+RP NLLA NA+ Y+ H TA++ P + +I T+SLG TTTTY I + LP Sbjct 375 PDRPWNLLAGANALMGAAYF-HDLTAYAAPQQGI--EIAAVTSSLGGTTTTYMIPSPTLP 431 Query 294 LVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 L+ L + G+P G ++ L+P++D Y Sbjct 432 LLLPLKQI-GVPDWIVGGLNNVLKPLVDAGY 461 >gi|15843151|ref|NP_338188.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794715|ref|NP_857208.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117123|ref|YP_177987.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 41 more sequence titles Length=479 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 104/271 (39%), Positives = 148/271 (55%), Gaps = 15/271 (5%) Query 64 ASADTALIVPGTAPSPYGPL-----RSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFW 118 +S T + VPG +P L R L + IG N++ P T VVSYP + Sbjct 196 SSTTTRITVPGASPVHAATLLPFIGRLLAARYAELNTAIGTNWF-PGTTPEVVSYPATIG 254 Query 119 PVTG-LNSPTVGSSVSAGTNNLDAAI---RSTDGPIFVAGLSQGTLVLDREQARLANDPT 174 ++G L + S++ G L I ++ P+ VAGLS G++V+DRE A LA DP Sbjct 255 VLSGSLGAVDANQSIAIGQQMLHNEILAATASGQPVTVAGLSMGSMVIDRELAYLAIDPN 314 Query 175 APPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDP 233 APP LTF++ P L + + P GT +PI YTV ESQY+T + QYDI++DP Sbjct 315 APPSSALTFVELAGPERGLAQTYLPVGTTIPIAGYTVGNAPESQYNTSVVYSQYDIWADP 374 Query 234 PNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLP 293 P+RP NLLA NA+ Y+ H TA++ P + +I T+SLG TTTTY I + LP Sbjct 375 PDRPWNLLAGANALMGAAYF-HDLTAYAAPQQGI--EIAAVTSSLGGTTTTYMIPSPTLP 431 Query 294 LVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 L+ L + G+P G ++ L+P++D Y Sbjct 432 LLLPLKQI-GVPDWIVGGLNNVLKPLVDAGY 461 >gi|289759695|ref|ZP_06519073.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289715259|gb|EFD79271.1| PPE family protein [Mycobacterium tuberculosis T85] Length=464 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 104/271 (39%), Positives = 148/271 (55%), Gaps = 15/271 (5%) Query 64 ASADTALIVPGTAPSPYGPL-----RSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFW 118 +S T + VPG +P L R L + IG N++ P T VVSYP + Sbjct 181 SSTTTRITVPGASPVHAATLLPFIGRLLAARYAELNTAIGTNWF-PGTTPEVVSYPATIG 239 Query 119 PVTG-LNSPTVGSSVSAGTNNLDAAI---RSTDGPIFVAGLSQGTLVLDREQARLANDPT 174 ++G L + S++ G L I ++ P+ VAGLS G++V+DRE A LA DP Sbjct 240 VLSGSLGAVDANQSIAIGQQMLHNEILAATASGQPVTVAGLSMGSMVIDRELAYLAIDPN 299 Query 175 APPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDP 233 APP LTF++ P L + + P GT +PI YTV ESQY+T + QYDI++DP Sbjct 300 APPSSALTFVELAGPERGLAQTYLPVGTTIPIAGYTVGNAPESQYNTSVVYSQYDIWADP 359 Query 234 PNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLP 293 P+RP NLLA NA+ Y+ H TA++ P + +I T+SLG TTTTY I + LP Sbjct 360 PDRPWNLLAGANALMGAAYF-HDLTAYAAPQQ--GIEIAAVTSSLGGTTTTYMIPSPTLP 416 Query 294 LVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 L+ L + G+P G ++ L+P++D Y Sbjct 417 LLLPLKQI-GVPDWIVGGLNNVLKPLVDAGY 446 >gi|307086331|ref|ZP_07495444.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308364217|gb|EFP53068.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|323717733|gb|EGB26931.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=506 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 104/271 (39%), Positives = 148/271 (55%), Gaps = 15/271 (5%) Query 64 ASADTALIVPGTAPSPYGPL-----RSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFW 118 +S T + VPG +P L R L + IG N++ P T VVSYP + Sbjct 223 SSTTTRITVPGASPVHAATLLPFIGRLLAARYAELNTAIGTNWF-PGTTPEVVSYPATIG 281 Query 119 PVTG-LNSPTVGSSVSAGTNNLDAAI---RSTDGPIFVAGLSQGTLVLDREQARLANDPT 174 ++G L + S++ G L I ++ P+ VAGLS G++V+DRE A LA DP Sbjct 282 VLSGSLGAVDANQSIAIGQQMLHNEILAATASGQPVTVAGLSMGSMVIDRELAYLAIDPN 341 Query 175 APPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDP 233 APP LTF++ P L + + P GT +PI YTV ESQY+T + QYDI++DP Sbjct 342 APPSSALTFVELAGPERGLAQTYLPVGTTIPIAGYTVGNAPESQYNTSVVYSQYDIWADP 401 Query 234 PNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLP 293 P+RP NLLA NA+ Y+ H TA++ P + +I T+SLG TTTTY I + LP Sbjct 402 PDRPWNLLAGANALMGAAYF-HDLTAYAAPQQGI--EIAAVTSSLGGTTTTYMIPSPTLP 458 Query 294 LVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 L+ L + G+P G ++ L+P++D Y Sbjct 459 LLLPLKQI-GVPDWIVGGLNNVLKPLVDAGY 488 >gi|289440968|ref|ZP_06430712.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289571780|ref|ZP_06452007.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289752252|ref|ZP_06511630.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289755668|ref|ZP_06515046.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289413887|gb|EFD11127.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289545534|gb|EFD49182.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289692839|gb|EFD60268.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289696255|gb|EFD63684.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=479 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 104/271 (39%), Positives = 148/271 (55%), Gaps = 15/271 (5%) Query 64 ASADTALIVPGTAPSPYGPL-----RSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFW 118 +S T + VPG +P L R L + IG N++ P T VVSYP + Sbjct 196 SSTTTRITVPGASPVHAATLLPFIGRLLAARYAELNTAIGTNWF-PGTTPEVVSYPATIG 254 Query 119 PVTG-LNSPTVGSSVSAGTNNLDAAI---RSTDGPIFVAGLSQGTLVLDREQARLANDPT 174 ++G L + S++ G L I ++ P+ VAGLS G++V+DRE A LA DP Sbjct 255 VLSGSLGAVDANQSIAIGQQMLHNEILAATASGQPVTVAGLSMGSMVIDRELAYLAIDPN 314 Query 175 APPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDP 233 APP LTF++ P L + + P GT +PI YTV ESQY+T + QYDI++DP Sbjct 315 APPSSALTFVELAGPERGLAQTYLPVGTTIPIAGYTVGNAPESQYNTSVVNSQYDIWADP 374 Query 234 PNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLP 293 P+RP NLLA NA+ Y+ H TA++ P + +I T+SLG TTTTY I + LP Sbjct 375 PDRPWNLLAGANALMGAAYF-HDLTAYAAPQQGI--EIAAVTSSLGGTTTTYMIPSPTLP 431 Query 294 LVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 L+ L + G+P G ++ L+P++D Y Sbjct 432 LLLPLKQI-GVPDWIVGGLNNVLKPLVDAGY 461 >gi|308372578|ref|ZP_07429131.2| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308332756|gb|EFP21607.1| PPE family protein [Mycobacterium tuberculosis SUMu004] Length=314 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/271 (39%), Positives = 148/271 (55%), Gaps = 15/271 (5%) Query 64 ASADTALIVPGTAPSPYGPL-----RSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFW 118 +S T + VPG +P L R L + IG N++ P T VVSYP + Sbjct 31 SSTTTRITVPGASPVHAATLLPFIGRLLAARYAELNTAIGTNWF-PGTTPEVVSYPATIG 89 Query 119 PVTG-LNSPTVGSSVSAGTNNLDAAI---RSTDGPIFVAGLSQGTLVLDREQARLANDPT 174 ++G L + S++ G L I ++ P+ VAGLS G++V+DRE A LA DP Sbjct 90 VLSGSLGAVDANQSIAIGQQMLHNEILAATASGQPVTVAGLSMGSMVIDRELAYLAIDPN 149 Query 175 APPPGQLTFIKAGDPNNLLWRAFRP-GTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDP 233 APP LTF++ P L + + P GT +PI YTV ESQY+T + QYDI++DP Sbjct 150 APPSSALTFVELAGPERGLAQTYLPVGTTIPIAGYTVGNAPESQYNTSVVYSQYDIWADP 209 Query 234 PNRPGNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLP 293 P+RP NLLA NA+ Y+ H TA++ P + +I T+SLG TTTTY I + LP Sbjct 210 PDRPWNLLAGANALMGAAYF-HDLTAYAAPQQGI--EIAAVTSSLGGTTTTYMIPSPTLP 266 Query 294 LVRALVDMAGLPPQAAGTVDAALRPIIDRAY 324 L+ L + G+P G ++ L+P++D Y Sbjct 267 LLLPLKQI-GVPDWIVGGLNNVLKPLVDAGY 296 Lambda K H 0.317 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 801003752784 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40