BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3828c
Length=203
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610964|ref|NP_218345.1| resolvase [Mycobacterium tuberculos... 402 1e-110
gi|289747670|ref|ZP_06507048.1| resolvase [Mycobacterium tubercu... 401 3e-110
gi|298527303|ref|ZP_07014712.1| conserved hypothetical protein [... 399 2e-109
gi|340628797|ref|YP_004747249.1| putative resolvase [Mycobacteri... 398 3e-109
gi|167969943|ref|ZP_02552220.1| hypothetical resolvase [Mycobact... 382 2e-104
gi|294993043|ref|ZP_06798734.1| resolvase [Mycobacterium tubercu... 373 1e-101
gi|326904407|gb|EGE51340.1| resolvase [Mycobacterium tuberculosi... 294 6e-78
gi|15609929|ref|NP_217308.1| resolvase [Mycobacterium tuberculos... 283 1e-74
gi|289575490|ref|ZP_06455717.1| resolvase [Mycobacterium tubercu... 282 2e-74
gi|15607745|ref|NP_215119.1| resolvase [Mycobacterium tuberculos... 281 5e-74
gi|31793968|ref|NP_856461.1| resolvase [Mycobacterium bovis AF21... 281 6e-74
gi|289446158|ref|ZP_06435902.1| resolvase [Mycobacterium tubercu... 278 4e-73
gi|15610116|ref|NP_217495.1| resolvase [Mycobacterium tuberculos... 275 2e-72
gi|289444543|ref|ZP_06434287.1| resolvase [Mycobacterium tubercu... 275 3e-72
gi|31794155|ref|NP_856648.1| resolvase [Mycobacterium bovis AF21... 270 9e-71
gi|254552945|ref|ZP_05143392.1| resolvase [Mycobacterium tubercu... 270 1e-70
gi|167969029|ref|ZP_02551306.1| hypothetical resolvase [Mycobact... 268 3e-70
gi|306774711|ref|ZP_07413048.1| resolvase [Mycobacterium tubercu... 267 5e-70
gi|333921804|ref|YP_004495385.1| putative resolvase [Amycolicico... 263 8e-69
gi|333920658|ref|YP_004494239.1| putative resolvase [Amycolicico... 259 1e-67
gi|333921217|ref|YP_004494798.1| putative resolvase [Amycolicico... 253 9e-66
gi|86741374|ref|YP_481774.1| resolvase-like protein [Frankia sp.... 244 5e-63
gi|158312541|ref|YP_001505049.1| resolvase domain-containing pro... 231 7e-59
gi|289749103|ref|ZP_06508481.1| resolvase [Mycobacterium tubercu... 226 1e-57
gi|86742114|ref|YP_482514.1| resolvase-like protein [Frankia sp.... 224 6e-57
gi|288921956|ref|ZP_06416167.1| Resolvase domain protein [Franki... 216 1e-54
gi|315092548|gb|EFT64524.1| resolvase protein [Propionibacterium... 215 2e-54
gi|327446282|gb|EGE92936.1| resolvase protein [Propionibacterium... 214 6e-54
gi|340627876|ref|YP_004746328.1| putative resolvase [Mycobacteri... 214 7e-54
gi|314929732|gb|EFS93563.1| resolvase protein [Propionibacterium... 214 7e-54
gi|315081078|gb|EFT53054.1| resolvase protein [Propionibacterium... 214 8e-54
gi|314973967|gb|EFT18063.1| resolvase protein [Propionibacterium... 214 8e-54
gi|328905690|gb|EGG25468.1| resolvase [Propionibacterium humerus... 213 1e-53
gi|240171118|ref|ZP_04749777.1| putative resolvase [Mycobacteriu... 209 3e-52
gi|158313451|ref|YP_001505959.1| resolvase domain-containing pro... 206 2e-51
gi|148824076|ref|YP_001288829.1| resolvase [Mycobacterium tuberc... 204 8e-51
gi|15610023|ref|NP_217402.1| resolvase [Mycobacterium tuberculos... 203 1e-50
gi|326904500|gb|EGE51433.1| resolvase [Mycobacterium tuberculosi... 202 2e-50
gi|340625932|ref|YP_004744384.1| putative resolvase [Mycobacteri... 201 7e-50
gi|15608061|ref|NP_215436.1| resolvase [Mycobacterium tuberculos... 201 7e-50
gi|289752977|ref|ZP_06512355.1| resolvase [Mycobacterium tubercu... 199 2e-49
gi|295696699|ref|YP_003589937.1| Resolvase domain-containing pro... 197 6e-49
gi|167629538|ref|YP_001680037.1| resolvase, n terminal domain [H... 194 7e-48
gi|339287910|gb|AEJ42020.1| Resolvase domain protein [Alicycloba... 192 3e-47
gi|258512473|ref|YP_003185907.1| Resolvase domain-containing pro... 191 4e-47
gi|289571177|ref|ZP_06451404.1| conserved hypothetical protein [... 191 6e-47
gi|339290995|gb|AEJ45105.1| Resolvase domain protein [Alicycloba... 190 1e-46
gi|339290736|gb|AEJ44846.1| Resolvase domain protein [Alicycloba... 190 1e-46
gi|158317728|ref|YP_001510236.1| resolvase domain-containing pro... 188 4e-46
gi|167969514|ref|ZP_02551791.1| IS1539 resolvase [Mycobacterium ... 187 6e-46
>gi|15610964|ref|NP_218345.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15843452|ref|NP_338489.1| IS1537 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31795002|ref|NP_857495.1| resolvase [Mycobacterium bovis AF2122/97]
40 more sequence titles
Length=203
Score = 402 bits (1034), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 202/203 (99%), Positives = 203/203 (100%), Gaps = 0/203 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
+SVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG
Sbjct 1 MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP
Sbjct 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY
Sbjct 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
Query 181 GERAAQNGAKRALAAAVGDAEAA 203
GERAAQNGAKRALAAAVGDAEAA
Sbjct 181 GERAAQNGAKRALAAAVGDAEAA 203
>gi|289747670|ref|ZP_06507048.1| resolvase [Mycobacterium tuberculosis 02_1987]
gi|289688198|gb|EFD55686.1| resolvase [Mycobacterium tuberculosis 02_1987]
Length=203
Score = 401 bits (1030), Expect = 3e-110, Method: Compositional matrix adjust.
Identities = 201/203 (99%), Positives = 202/203 (99%), Gaps = 0/203 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
+SVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG
Sbjct 1 MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP
Sbjct 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDL EVDDDLVGDMTEILTSMCARLY
Sbjct 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLPEVDDDLVGDMTEILTSMCARLY 180
Query 181 GERAAQNGAKRALAAAVGDAEAA 203
GERAAQNGAKRALAAAVGDAEAA
Sbjct 181 GERAAQNGAKRALAAAVGDAEAA 203
>gi|298527303|ref|ZP_07014712.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497097|gb|EFI32391.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|328460604|gb|AEB06027.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201
Score = 399 bits (1024), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 200/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%)
Query 3 VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT 62
+VCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT
Sbjct 1 MVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT 60
Query 63 LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV 122
LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV
Sbjct 61 LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV 120
Query 123 TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE 182
TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE
Sbjct 121 TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE 180
Query 183 RAAQNGAKRALAAAVGDAEAA 203
RAAQNGAKRALAAAVGDAEAA
Sbjct 181 RAAQNGAKRALAAAVGDAEAA 201
>gi|340628797|ref|YP_004747249.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
gi|340006987|emb|CCC46178.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=203
Score = 398 bits (1022), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 199/203 (99%), Positives = 201/203 (99%), Gaps = 0/203 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
+SVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG
Sbjct 1 MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RT+VYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP
Sbjct 61 RTVVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
VVTRIV EHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDM EILTSMCARLY
Sbjct 121 VVTRIVAEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMIEILTSMCARLY 180
Query 181 GERAAQNGAKRALAAAVGDAEAA 203
GERAAQNGAKRALAAAVGDAEAA
Sbjct 181 GERAAQNGAKRALAAAVGDAEAA 203
>gi|167969943|ref|ZP_02552220.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
gi|297636511|ref|ZP_06954291.1| resolvase [Mycobacterium tuberculosis KZN 4207]
gi|297733506|ref|ZP_06962624.1| resolvase [Mycobacterium tuberculosis KZN R506]
26 more sequence titles
Length=193
Score = 382 bits (981), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 193/193 (100%), Positives = 193/193 (100%), Gaps = 0/193 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS
Sbjct 1 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR
Sbjct 61 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK
Sbjct 121 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 180
Query 191 RALAAAVGDAEAA 203
RALAAAVGDAEAA
Sbjct 181 RALAAAVGDAEAA 193
>gi|294993043|ref|ZP_06798734.1| resolvase [Mycobacterium tuberculosis 210]
gi|339296637|gb|AEJ48748.1| resolvase [Mycobacterium tuberculosis CCDC5079]
gi|339300234|gb|AEJ52344.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=189
Score = 373 bits (957), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 188/189 (99%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 15 VWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR 74
+WAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR
Sbjct 1 MWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR 60
Query 75 SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC 134
SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC
Sbjct 61 SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC 120
Query 135 WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALA 194
WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALA
Sbjct 121 WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALA 180
Query 195 AAVGDAEAA 203
AAVGDAEAA
Sbjct 181 AAVGDAEAA 189
>gi|326904407|gb|EGE51340.1| resolvase [Mycobacterium tuberculosis W-148]
gi|328457897|gb|AEB03320.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201
Score = 294 bits (752), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 146/185 (79%), Positives = 158/185 (86%), Gaps = 0/185 (0%)
Query 3 VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT 62
+ CCRN MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D + S R RT
Sbjct 1 MACCRNNSMNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRART 60
Query 63 LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV 122
VYARVSSADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V
Sbjct 61 AVYARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSV 120
Query 123 TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE 182
RIVVEHRDRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+
Sbjct 121 KRIVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK 180
Query 183 RAAQN 187
RAAQN
Sbjct 181 RAAQN 185
>gi|15609929|ref|NP_217308.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15842330|ref|NP_337367.1| IS1602 resolvase [Mycobacterium tuberculosis CDC1551]
gi|121638672|ref|YP_978896.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
74 more sequence titles
Length=193
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/177 (81%), Positives = 153/177 (87%), Gaps = 0/177 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D + S R RT VYARVSS
Sbjct 1 MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct 61 ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN 187
DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct 121 DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN 177
>gi|289575490|ref|ZP_06455717.1| resolvase [Mycobacterium tuberculosis K85]
gi|289539921|gb|EFD44499.1| resolvase [Mycobacterium tuberculosis K85]
Length=193
Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/177 (80%), Positives = 153/177 (87%), Gaps = 0/177 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLAVWAERNG+A V AYRWF AGLLPVPA++ GRLILV+D + S R RT VYARVSS
Sbjct 1 MNLAVWAERNGIARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct 61 ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN 187
DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct 121 DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN 177
>gi|15607745|ref|NP_215119.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15840006|ref|NP_335043.1| IS1536 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31791787|ref|NP_854280.1| resolvase [Mycobacterium bovis AF2122/97]
39 more sequence titles
Length=202
Score = 281 bits (718), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/185 (77%), Positives = 157/185 (85%), Gaps = 0/185 (0%)
Query 3 VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT 62
+ CCRNR MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E + +T
Sbjct 1 MACCRNRGMNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKT 60
Query 63 LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV 122
VYARVSSADQ+SDLDR+VARVT+WAT++ + VDKVV E G LNGHRRKF A+L D V
Sbjct 61 AVYARVSSADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSV 120
Query 123 TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE 182
TRIVVEHRDRFC FGSEYV AAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+
Sbjct 121 TRIVVEHRDRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGK 180
Query 183 RAAQN 187
RAAQN
Sbjct 181 RAAQN 185
>gi|31793968|ref|NP_856461.1| resolvase [Mycobacterium bovis AF2122/97]
gi|31619562|emb|CAD95000.1| POSSIBLE RESOLVASE [Mycobacterium bovis AF2122/97]
Length=193
Score = 281 bits (718), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 141/177 (80%), Positives = 152/177 (86%), Gaps = 0/177 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLAVWAERNGVA V YRWF AGLLPVPA++ GRLILV+D + S R RT VYARVSS
Sbjct 1 MNLAVWAERNGVARVTVYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct 61 ADQKPDLDRQVARVTAWATAEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN 187
DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct 121 DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN 177
>gi|289446158|ref|ZP_06435902.1| resolvase [Mycobacterium tuberculosis CPHL_A]
gi|289419116|gb|EFD16317.1| resolvase [Mycobacterium tuberculosis CPHL_A]
Length=202
Score = 278 bits (710), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/185 (77%), Positives = 156/185 (85%), Gaps = 0/185 (0%)
Query 3 VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT 62
+ CCRNR MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E + +T
Sbjct 1 MACCRNRGMNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKT 60
Query 63 LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV 122
VYARVSSADQ+SDLDR+VARVT+WAT++ + VDKVV E G LNGHRRKF A+L D V
Sbjct 61 AVYARVSSADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSV 120
Query 123 TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE 182
TRIVVEHRDRFC FGSEYV AAL AQGRELVVVD AE DDDLV DMTEILTSMCARLYG+
Sbjct 121 TRIVVEHRDRFCRFGSEYVHAALAAQGRELVVVDSAEGDDDLVWDMTEILTSMCARLYGK 180
Query 183 RAAQN 187
RAAQN
Sbjct 181 RAAQN 185
>gi|15610116|ref|NP_217495.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15842533|ref|NP_337570.1| IS1538 resolvase [Mycobacterium tuberculosis CDC1551]
gi|148662829|ref|YP_001284352.1| IS1538 resolvase [Mycobacterium tuberculosis H37Ra]
47 more sequence titles
Length=194
Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/194 (75%), Positives = 159/194 (82%), Gaps = 1/194 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAERNGVA AYRWFRAGLL V A+RVGRLILV++PA + R T VYARVSS
Sbjct 1 MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct 61 ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DRFC GS+YV+AA AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N K
Sbjct 121 DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK 180
Query 191 RALAAAVG-DAEAA 203
RALAAA G D EAA
Sbjct 181 RALAAAAGEDHEAA 194
>gi|289444543|ref|ZP_06434287.1| resolvase [Mycobacterium tuberculosis T46]
gi|289448651|ref|ZP_06438395.1| resolvase [Mycobacterium tuberculosis CPHL_A]
gi|289575686|ref|ZP_06455913.1| resolvase [Mycobacterium tuberculosis K85]
23 more sequence titles
Length=194
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/194 (75%), Positives = 159/194 (82%), Gaps = 1/194 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAERNGVA AYRWFRAGLL V A+RVGRLILV++PA + R T VYARVSS
Sbjct 1 MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct 61 ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DRFC GS+YV+AA AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N K
Sbjct 121 DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK 180
Query 191 RALAAAVG-DAEAA 203
RALAAA G D EAA
Sbjct 181 RALAAAAGEDHEAA 194
>gi|31794155|ref|NP_856648.1| resolvase [Mycobacterium bovis AF2122/97]
gi|121638860|ref|YP_979084.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991352|ref|YP_002646041.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
gi|31619750|emb|CAD96690.1| PROBABLE RESOLVASE [Mycobacterium bovis AF2122/97]
gi|121494508|emb|CAL72989.1| Probable resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774467|dbj|BAH27273.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602899|emb|CCC65577.1| probable resolvase [Mycobacterium bovis BCG str. Moreau RDJ]
Length=194
Score = 270 bits (690), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/194 (74%), Positives = 157/194 (81%), Gaps = 1/194 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAERNGVA AYRWFRAGLL V A+RVGRLILV++PA + R T VYARVSS
Sbjct 1 MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ++DLDR+VARVTAWA +Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct 61 ADQKADLDRQVARVTAWAAAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DRFC GS+YV+AA AQGRELVVVD AEV DDLV DMTEILTSMCARLYG+RAA+N K
Sbjct 121 DRFCRLGSKYVQAAFAAQGRELVVVDSAEVGDDLVRDMTEILTSMCARLYGKRAAENRTK 180
Query 191 RALAAAVG-DAEAA 203
RALAAA G D EAA
Sbjct 181 RALAAAAGEDHEAA 194
>gi|254552945|ref|ZP_05143392.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=158
Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/137 (98%), Positives = 135/137 (99%), Gaps = 0/137 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS
Sbjct 1 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR
Sbjct 61 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVA 147
DRFCWFGSEYVE L++
Sbjct 121 DRFCWFGSEYVERPLLS 137
>gi|167969029|ref|ZP_02551306.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
gi|254230942|ref|ZP_04924269.1| hypothetical protein TBCG_00600 [Mycobacterium tuberculosis C]
gi|254549562|ref|ZP_05140009.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
26 more sequence titles
Length=194
Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/177 (78%), Positives = 151/177 (86%), Gaps = 0/177 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E + +T VYARVSS
Sbjct 1 MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+SDLDR+VARVT+WAT++ + VDKVV E G LNGHRRKF A+L D VTRIVVEHR
Sbjct 61 ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN 187
DRFC FGSEYV AAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct 121 DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN 177
>gi|306774711|ref|ZP_07413048.1| resolvase [Mycobacterium tuberculosis SUMu001]
gi|306970815|ref|ZP_07483476.1| resolvase [Mycobacterium tuberculosis SUMu010]
gi|307078538|ref|ZP_07487708.1| resolvase [Mycobacterium tuberculosis SUMu011]
gi|308216606|gb|EFO76005.1| resolvase [Mycobacterium tuberculosis SUMu001]
gi|308359602|gb|EFP48453.1| resolvase [Mycobacterium tuberculosis SUMu010]
gi|308363530|gb|EFP52381.1| resolvase [Mycobacterium tuberculosis SUMu011]
Length=194
Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/177 (78%), Positives = 151/177 (86%), Gaps = 0/177 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E + +T VYARVSS
Sbjct 1 MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+SDLDR+VARVT+WAT++ + VDKVV E G LNGHRRKF A+L D VTRIVVEHR
Sbjct 61 ADQKSDLDRQVARVTSWATAEPIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN 187
DRFC FGSEYV AAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct 121 DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN 177
>gi|333921804|ref|YP_004495385.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
gi|333484025|gb|AEF42585.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=195
Score = 263 bits (673), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/171 (77%), Positives = 144/171 (85%), Gaps = 0/171 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WA+RNGVA V AYRWFR+GLLPVPA++VGRLILV+DPA E G T VYARVSS
Sbjct 1 MNLATWAQRNGVARVTAYRWFRSGLLPVPARKVGRLILVDDPAAEMQSSGCTAVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ++DL R+VARVTAWAT + + VDKVV E G ALNGHRRKF ALL DP + RIVVEHR
Sbjct 61 ADQKADLHRQVARVTAWATDRRIPVDKVVTEVGSALNGHRRKFLALLRDPSIARIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
DRFC FGSEYV+AAL A GRELVV+D +EVDDDLV DMTEILTSMCARLY
Sbjct 121 DRFCRFGSEYVQAALAAHGRELVVIDSSEVDDDLVRDMTEILTSMCARLYS 171
>gi|333920658|ref|YP_004494239.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482879|gb|AEF41439.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215
Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/201 (70%), Positives = 154/201 (77%), Gaps = 0/201 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
LSVVC MNLA WA+RNGVA V AYRWFR+G LPVPA++ G LILV DP G
Sbjct 11 LSVVCGTTEHMNLATWAQRNGVARVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHG 70
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RT VYA VSSADQ++ LDR+VARVTAWA S+ + V KVV E G ALNGHR KF ALL DP
Sbjct 71 RTAVYAGVSSADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDP 130
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
+VTRIVVEHRDRFC FGSEYV+AAL A G LVVVD EVDDDLV DMTEILTSMCARLY
Sbjct 131 IVTRIVVEHRDRFCRFGSEYVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLY 190
Query 181 GERAAQNGAKRALAAAVGDAE 201
G+RAA + AKRA+AA D
Sbjct 191 GKRAAVHRAKRAVAATADDTS 211
>gi|333921217|ref|YP_004494798.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483438|gb|AEF41998.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215
Score = 253 bits (647), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/201 (69%), Positives = 152/201 (76%), Gaps = 0/201 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
LSVVC MNLA WA+RNGV V AYRWFR+G LPVPA++ G LILV DP G
Sbjct 11 LSVVCGTTGHMNLATWAQRNGVGRVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHG 70
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RT VYA VSSADQ++ LDR+VARVTAWA S+ + V KVV E G ALNGHR KF ALL DP
Sbjct 71 RTAVYAGVSSADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDP 130
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
+VTRIVVEHRDRFC FGSE V+AAL A G LVVVD EVDDDLV DMTEILTSMCARLY
Sbjct 131 IVTRIVVEHRDRFCRFGSECVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLY 190
Query 181 GERAAQNGAKRALAAAVGDAE 201
G+RAA + AKRA+AA D
Sbjct 191 GKRAAVHRAKRAVAATADDTS 211
>gi|86741374|ref|YP_481774.1| resolvase-like protein [Frankia sp. CcI3]
gi|86568236|gb|ABD12045.1| Resolvase-like [Frankia sp. CcI3]
Length=190
Score = 244 bits (623), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/177 (73%), Positives = 142/177 (81%), Gaps = 1/177 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNL WAE GVA+V A RW+ AG LPVPA+RVG LILV +P + +G G T VYARVSS
Sbjct 1 MNLKEWAESQGVAYVTARRWYAAGKLPVPARRVGGLILVGEPD-QPTGDGLTAVYARVSS 59
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQR DLDR+VARVTAWAT Q+L VDKVV E G ALNGHRRKF ALL DP V IVVE+R
Sbjct 60 ADQRPDLDRQVARVTAWATGQNLPVDKVVTEVGSALNGHRRKFLALLRDPDVATIVVEYR 119
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN 187
DRF FG+EYVEAAL AQGR L+VVD EVDDDLVGD+TEILTS+CARLYG RAA N
Sbjct 120 DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYGRRAAVN 176
>gi|158312541|ref|YP_001505049.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158317424|ref|YP_001509932.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158107946|gb|ABW10143.1| Resolvase domain [Frankia sp. EAN1pec]
gi|158112829|gb|ABW15026.1| Resolvase domain [Frankia sp. EAN1pec]
Length=190
Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/171 (71%), Positives = 133/171 (78%), Gaps = 1/171 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNL WAE GVA+V A RWF AG LPVPA++VG LILV +P + G +VYARVSS
Sbjct 1 MNLKEWAESQGVAYVTAQRWFHAGKLPVPARKVGGLILVGEPD-RPATSGTVVVYARVSS 59
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+SDLDR+VA VT WAT Q L VD+VV E G ALNGHRRKF ALL DP T IVVEHR
Sbjct 60 ADQKSDLDRQVACVTGWATGQGLPVDRVVTEVGSALNGHRRKFLALLRDPAATTIVVEHR 119
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
DRF FG+EYVEAAL A GR L+VVD AEVDDDLV D+TEILTSMCARLYG
Sbjct 120 DRFARFGAEYVEAALAANGRRLLVVDPAEVDDDLVRDITEILTSMCARLYG 170
>gi|289749103|ref|ZP_06508481.1| resolvase [Mycobacterium tuberculosis T92]
gi|289689690|gb|EFD57119.1| resolvase [Mycobacterium tuberculosis T92]
Length=172
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/154 (76%), Positives = 130/154 (85%), Gaps = 0/154 (0%)
Query 34 GLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDRRVARVTAWATSQHL 93
G PVPA++VGRLILV++ A E + +T VYARVSSADQ+SDLDR+VARVT+WAT++ +
Sbjct 2 GSCPVPARKVGRLILVDELASEAGAQPKTAVYARVSSADQKSDLDRQVARVTSWATAEQI 61
Query 94 SVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSEYVEAALVAQGRELV 153
VDKVV E G LNGHRRKF A+L D VTRIVVEHRDRFC FGSEYV AAL AQGRELV
Sbjct 62 PVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHRDRFCRFGSEYVHAALAAQGRELV 121
Query 154 VVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN 187
VVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct 122 VVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN 155
>gi|86742114|ref|YP_482514.1| resolvase-like protein [Frankia sp. CcI3]
gi|86568976|gb|ABD12785.1| Resolvase-like [Frankia sp. CcI3]
Length=197
Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/171 (67%), Positives = 134/171 (79%), Gaps = 1/171 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
+NL WA NGV + A RW+R GLLPVPA++VG L+LV++ V +GR +VYARVSS
Sbjct 8 VNLKEWAAANGVGYTTARRWYRDGLLPVPARKVGGLVLVDESTVP-AGRPVAVVYARVSS 66
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+ DLDR+VAR+ WA SQ+L+V +VV E G ALNGHRRKF LL DP V IVVEHR
Sbjct 67 ADQKPDLDRQVARIVTWAASQNLAVGRVVTEVGSALNGHRRKFLGLLRDPAVATIVVEHR 126
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
DRF FG+EYVEAAL AQGR L+VVD EVDDDLVGD+TEILTS+CARLYG
Sbjct 127 DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYG 177
>gi|288921956|ref|ZP_06416167.1| Resolvase domain protein [Frankia sp. EUN1f]
gi|288346714|gb|EFC81032.1| Resolvase domain protein [Frankia sp. EUN1f]
Length=179
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/157 (73%), Positives = 126/157 (81%), Gaps = 1/157 (0%)
Query 25 VIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDRRVARV 84
V AYRWFR G LPVPA+RVGRLILV AVE G T+VYARVSSADQ+SDLDR+VARV
Sbjct 4 VTAYRWFREGKLPVPARRVGRLILVEPDAVERPA-GLTVVYARVSSADQKSDLDRQVARV 62
Query 85 TAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSEYVEAA 144
T WAT Q +VD+VV E G ALNGHRRKF ALL DP V+ IVVEHR +F FG+E VEAA
Sbjct 63 TGWATGQGRAVDRVVTEVGSALNGHRRKFLALLRDPDVSTIVVEHRGKFARFGAENVEAA 122
Query 145 LVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
L A GREL+VVD AEVDDDLV DMTEILTS+C R+YG
Sbjct 123 LAANGRELLVVDPAEVDDDLVRDMTEILTSLCVRMYG 159
>gi|315092548|gb|EFT64524.1| resolvase protein [Propionibacterium acnes HL110PA4]
Length=206
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/203 (55%), Positives = 145/203 (72%), Gaps = 13/203 (6%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR 61
MNL WA G+++ A RW+ GL+PVP RVGRL+LV+ +E G +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVD---CDEHGLPFEGSTFEPTK 57
Query 62 TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV 121
T++YARVSSADQ+SDLDR++ARV WA+++ LSVD VV E G L+GHR+KF LL D
Sbjct 58 TIIYARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGS 117
Query 122 VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
V I+VEHRDRFC FGSEY+EAAL AQ R L+VVD E++DDLV DMT++LTSMCARLYG
Sbjct 118 VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG 177
Query 182 ERAAQNGAKRALAAA-VGDAEAA 203
+R+A++ A++A+ + D E +
Sbjct 178 KRSAKHRARKAVETVMITDGEES 200
>gi|327446282|gb|EGE92936.1| resolvase protein [Propionibacterium acnes HL043PA1]
gi|327451294|gb|EGE97948.1| resolvase protein [Propionibacterium acnes HL043PA2]
Length=206
Score = 214 bits (545), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/192 (57%), Positives = 142/192 (74%), Gaps = 12/192 (6%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR 61
MNL WA G+++ A RW+ GL+PVP +RVGRL+LV+ +E G +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVD---CDEHGLPFEGSTFEPTK 57
Query 62 TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV 121
T++YARVSSADQ+SDLDR++ARV WA+++ LSVD VV E G L+GHR+KF LL D
Sbjct 58 TIIYARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGS 117
Query 122 VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
V I+VEHRDRFC FGSEY+EAAL AQ R L+VVD E++DDLV DMT++LTSMCARLYG
Sbjct 118 VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG 177
Query 182 ERAAQNGAKRAL 193
+R+A++ A++A+
Sbjct 178 KRSAKHRARKAV 189
>gi|340627876|ref|YP_004746328.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
gi|340006066|emb|CCC45238.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=295
Score = 214 bits (544), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/182 (68%), Positives = 140/182 (77%), Gaps = 0/182 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
LSVVCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + G
Sbjct 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RT V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP
Sbjct 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
V RIV++ RDR FG E V+A L A GRELVVVD A+ DDD+VGD+TEILTSMCARLY
Sbjct 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADGDDDVVGDITEILTSMCARLY 270
Query 181 GE 182
G+
Sbjct 271 GK 272
>gi|314929732|gb|EFS93563.1| resolvase protein [Propionibacterium acnes HL044PA1]
Length=206
Score = 214 bits (544), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/196 (55%), Positives = 141/196 (72%), Gaps = 12/196 (6%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR 61
MNL WA G+++ A RW+ GL+PVP RVGRL+LV+ +E G +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVD---CDEHGLPFEGSTPEPTK 57
Query 62 TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV 121
T++YARV SADQ+ DLDR++ARV WA+++ LSVD VV E G L+GHR+KF LL D
Sbjct 58 TIIYARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGS 117
Query 122 VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
V I+VEHRDRFC FGSEY+EAAL AQ R L+VVD E++DDLV DMT++LTSMCARLYG
Sbjct 118 VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG 177
Query 182 ERAAQNGAKRALAAAV 197
+R+A++ A++A+ A+
Sbjct 178 KRSAKHRARKAMETAM 193
>gi|315081078|gb|EFT53054.1| resolvase protein [Propionibacterium acnes HL078PA1]
Length=206
Score = 214 bits (544), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/193 (57%), Positives = 142/193 (74%), Gaps = 6/193 (3%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVN----DPAVEESGRGRT--LV 64
MNL WA G+++ A RW+ GL+PVP +RVGRL+LV+ E S G T ++
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFGPTKVII 60
Query 65 YARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTR 124
YARVSSADQ+SDLDR++ARV WA+++ LSVD VV E G L+GHR+KF LL D V
Sbjct 61 YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT 120
Query 125 IVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERA 184
I+VEHRDRFC FGSEY+EAAL AQ R LVVVD E++DDLV DMT++LTSMCARLYG+R+
Sbjct 121 ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS 180
Query 185 AQNGAKRALAAAV 197
A++ A++A+ +
Sbjct 181 AKHRARKAVETVM 193
>gi|314973967|gb|EFT18063.1| resolvase protein [Propionibacterium acnes HL053PA1]
Length=206
Score = 214 bits (544), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/196 (56%), Positives = 143/196 (73%), Gaps = 12/196 (6%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR 61
MNL WA G+++ A RW+ GL+PVP +RVGRL+LV+ +E G +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVD---CDEHGLPFEGSTFEPTK 57
Query 62 TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV 121
T++YARVSSADQ+SDLDR++ARV WA+++ LSVD VV E G L+GHR+KF LL D
Sbjct 58 TIIYARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGS 117
Query 122 VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
V I+VEHRDRFC FGSEY+EAAL AQ R LVVVD E+++DLV DMT++LTSMCARLYG
Sbjct 118 VRTILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIENDLVQDMTDVLTSMCARLYG 177
Query 182 ERAAQNGAKRALAAAV 197
+R+A++ A++A+ +
Sbjct 178 KRSAKHRARKAVETVM 193
>gi|328905690|gb|EGG25468.1| resolvase [Propionibacterium humerusii P08]
Length=206
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/196 (55%), Positives = 141/196 (72%), Gaps = 12/196 (6%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR 61
MNL WA G+++ A RW+ GL+PVP RVGRL+LV+ +E G +
Sbjct 1 MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVD---CDEHGLPFEGSTPEPTK 57
Query 62 TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV 121
T++YARV SADQ+ DLDR++ARV WA+++ LSVD VV E G L+GHR+KF LL D
Sbjct 58 TIIYARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGS 117
Query 122 VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
V I+VEHRDRFC FGSEY+EAAL AQ R L+VVD E++DDLV DMT++LTSMCARLYG
Sbjct 118 VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG 177
Query 182 ERAAQNGAKRALAAAV 197
+R+A++ A++A+ A+
Sbjct 178 KRSAKHRARKAVETAM 193
>gi|240171118|ref|ZP_04749777.1| putative resolvase [Mycobacterium kansasii ATCC 12478]
gi|296165344|ref|ZP_06847885.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899235|gb|EFG78700.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=193
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/193 (61%), Positives = 130/193 (68%), Gaps = 0/193 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAE GV AYRWFR G LPVPA+RVGRLILV A +VYARVSS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKAAASVSGAAATVVVYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
DQRSDLDR+VARVTAWAT + L V +VV E G LNG R K +L DP IVVEHR
Sbjct 61 HDQRSDLDRQVARVTAWATERDLEVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DR FG E++EAAL AQGR +VV D E DDLV DM E+LTSMCARLYG R A+N A
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVRDMIEVLTSMCARLYGRRGARNRAM 180
Query 191 RALAAAVGDAEAA 203
RA+ A + AA
Sbjct 181 RAVTATKREPGAA 193
>gi|158313451|ref|YP_001505959.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158108856|gb|ABW11053.1| Resolvase domain [Frankia sp. EAN1pec]
Length=182
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/162 (67%), Positives = 125/162 (78%), Gaps = 1/162 (0%)
Query 20 NGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDR 79
NGV + A +WF G LPVPA+RVG LILV++PA G +VYA VSSADQ SDLDR
Sbjct 2 NGVGYSTARQWFLDGRLPVPARRVGGLILVDEPA-RSVPSGTVVVYACVSSADQESDLDR 60
Query 80 RVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSE 139
+VAR+ W ++L+V KVV E G AL+GHRR+F ALL DP VT IVVEHRDRF WFG+E
Sbjct 61 QVARIVRWTAGENLAVGKVVTEVGSALDGHRREFLALLRDPEVTTIVVEHRDRFAWFGAE 120
Query 140 YVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG 181
YVEAAL A GR L+VVD +EVDDDLV D+TEILTSMCARLYG
Sbjct 121 YVEAALAASGRRLLVVDPSEVDDDLVRDITEILTSMCARLYG 162
>gi|148824076|ref|YP_001288829.1| resolvase [Mycobacterium tuberculosis F11]
gi|148722603|gb|ABR07228.1| hypothetical resolvase [Mycobacterium tuberculosis F11]
Length=295
Score = 204 bits (518), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/182 (68%), Positives = 142/182 (79%), Gaps = 0/182 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
LSVVCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + G
Sbjct 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RT+V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP
Sbjct 151 RTVVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
V RIV++ RDR FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLY
Sbjct 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 270
Query 181 GE 182
G+
Sbjct 271 GK 272
>gi|15610023|ref|NP_217402.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15842428|ref|NP_337465.1| IS1539 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31794062|ref|NP_856555.1| resolvase [Mycobacterium bovis AF2122/97]
43 more sequence titles
Length=295
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/182 (68%), Positives = 141/182 (78%), Gaps = 0/182 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
LSVVCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + G
Sbjct 91 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 150
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RT V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP
Sbjct 151 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 210
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
V RIV++ RDR FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLY
Sbjct 211 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 270
Query 181 GE 182
G+
Sbjct 271 GK 272
>gi|326904500|gb|EGE51433.1| resolvase [Mycobacterium tuberculosis W-148]
gi|328457800|gb|AEB03223.1| resolvase [Mycobacterium tuberculosis KZN 4207]
gi|339295724|gb|AEJ47835.1| resolvase [Mycobacterium tuberculosis CCDC5079]
gi|339299340|gb|AEJ51450.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=223
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/182 (68%), Positives = 141/182 (78%), Gaps = 0/182 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
LSVVCCRN MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + G
Sbjct 19 LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG 78
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
RT V AR+SSADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP
Sbjct 79 RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP 138
Query 121 VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY 180
V RIV++ RDR FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLY
Sbjct 139 TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY 198
Query 181 GE 182
G+
Sbjct 199 GK 200
>gi|340625932|ref|YP_004744384.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
gi|340004122|emb|CCC43259.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=193
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/186 (60%), Positives = 127/186 (69%), Gaps = 0/186 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAE GV AYRWFR G LPVPA+RVGRLILV A + ++YARVSS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
D+RSDLDR+VAR+TAWAT + L V +VV E G LNG R K +L DP IVVEHR
Sbjct 61 HDRRSDLDRQVARLTAWATERDLGVGQVVREVGSGLNGKRPKLRRILSDPDARVIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DR FG E++EAAL AQGR +VV D E DDLV DM E+LT MCARLYG R A+N A
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM 180
Query 191 RALAAA 196
RA+ A
Sbjct 181 RAVTEA 186
>gi|15608061|ref|NP_215436.1| resolvase [Mycobacterium tuberculosis H37Rv]
gi|15840344|ref|NP_335381.1| IS1535 resolvase [Mycobacterium tuberculosis CDC1551]
gi|31792109|ref|NP_854602.1| resolvase [Mycobacterium bovis AF2122/97]
74 more sequence titles
Length=193
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/186 (60%), Positives = 127/186 (69%), Gaps = 0/186 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAE GV AYRWFR G LPVPA+RVGRLILV A + ++YARVSS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
D+RSDLDR+VAR+TAWAT + L V +VV E G LNG R K +L DP IVVEHR
Sbjct 61 HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DR FG E++EAAL AQGR +VV D E DDLV DM E+LT MCARLYG R A+N A
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM 180
Query 191 RALAAA 196
RA+ A
Sbjct 181 RAVTEA 186
>gi|289752977|ref|ZP_06512355.1| resolvase [Mycobacterium tuberculosis EAS054]
gi|289693564|gb|EFD60993.1| resolvase [Mycobacterium tuberculosis EAS054]
Length=193
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/186 (60%), Positives = 127/186 (69%), Gaps = 0/186 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNLA WAE GV AYRWFR G LPVPA+RVGRLILV A + ++YARVSS
Sbjct 1 MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
D+RSDLDR+VAR+TAWAT + L V +VV E G LNG R K +L DP IVV+HR
Sbjct 61 HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVKHR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK 190
DR FG E++EAAL AQGR +VV D E DDLV DM E+LT MCARLYG R A+N A
Sbjct 121 DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM 180
Query 191 RALAAA 196
RA+ A
Sbjct 181 RAVTEA 186
>gi|295696699|ref|YP_003589937.1| Resolvase domain-containing protein [Bacillus tusciae DSM 2912]
gi|295412301|gb|ADG06793.1| Resolvase domain protein [Bacillus tusciae DSM 2912]
Length=192
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/194 (55%), Positives = 134/194 (70%), Gaps = 3/194 (1%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPA-QRVGRLILVNDPAVEESGRGRTLVYARVS 69
M L+ WA + G++++ A+RW++ G LPVPA Q ILV+ P + GR T+VYARVS
Sbjct 1 MKLSDWARQQGISYMTAWRWWKDGKLPVPARQTESGTILVDVPPSRKDGR--TVVYARVS 58
Query 70 SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH 129
S DQRSDLDR+V+R+T WAT + L VD+VV E G +NG R K +L D VT I+VEH
Sbjct 59 SHDQRSDLDRQVSRITQWATERDLVVDEVVTEVGSGMNGKRPKLRRILADARVTTIIVEH 118
Query 130 RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA 189
RDR FG EY+E+AL AQGR +VVVD E DDLV DM E+LTS CARLYG R A+N A
Sbjct 119 RDRLARFGVEYLESALAAQGRHIVVVDSGETRDDLVRDMIEVLTSFCARLYGRRGARNRA 178
Query 190 KRALAAAVGDAEAA 203
RA+ AA D + +
Sbjct 179 LRAVTAAKKDGKES 192
>gi|167629538|ref|YP_001680037.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
gi|167592278|gb|ABZ84026.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
Length=188
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/186 (55%), Positives = 128/186 (69%), Gaps = 4/186 (2%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPA-QRVGRLILVNDPAVEESGRGRTLVYARVS 69
M L+ WA++NG+ + A++WF+AG LPVPA Q IL+ + E G+ +YARVS
Sbjct 1 MKLSEWAKKNGITYRTAWQWFKAGKLPVPAVQMPTGTILIQEGGKHE---GKVALYARVS 57
Query 70 SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH 129
SADQ+SDLDR+V+R+ +A Q V + V E G LNG R K LL DP V IVVEH
Sbjct 58 SADQKSDLDRQVSRLLTYANEQGWDVGEAVTEIGSGLNGRRPKLMKLLADPKVKVIVVEH 117
Query 130 RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA 189
RDR FG EYVE+ALVAQGR +VVVD +E+ DDLV DM E+LTS CARLYG R+A N A
Sbjct 118 RDRLMRFGFEYVESALVAQGRRIVVVDQSELKDDLVQDMIEVLTSFCARLYGRRSAANKA 177
Query 190 KRALAA 195
K+A+ A
Sbjct 178 KKAMEA 183
>gi|339287910|gb|AEJ42020.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length=208
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/184 (55%), Positives = 126/184 (69%), Gaps = 3/184 (1%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGR-LILVNDPAVEESGRGRTLVYARVS 69
M L+ WA +NG+ + A+RW + G +PVP ++ ILV++P E S +YARVS
Sbjct 14 MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--ESSTENAVALYARVS 71
Query 70 SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH 129
SADQ++DLDR++AR+ +AT Q L V K V E G LNGHR K LL +P IVVEH
Sbjct 72 SADQKADLDRQIARLMEFATEQKLVVVKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEH 131
Query 130 RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA 189
RDR FG EYVEAAL AQGR ++VV+ EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct 132 RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA 191
Query 190 KRAL 193
KRAL
Sbjct 192 KRAL 195
>gi|258512473|ref|YP_003185907.1| Resolvase domain-containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479199|gb|ACV59518.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length=195
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/184 (55%), Positives = 126/184 (69%), Gaps = 3/184 (1%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVP-AQRVGRLILVNDPAVEESGRGRTLVYARVS 69
M L+ WA +NG+++ A+RW + G +PVP Q ILV++P E S +YARVS
Sbjct 1 MKLSDWARKNGISYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--EPSTTNAVALYARVS 58
Query 70 SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH 129
SADQ++DLDR++AR+ +A +Q L V K V E G LNGHR K +L DP IVVEH
Sbjct 59 SADQKADLDRQIARLMEFAMAQKLVVVKAVTEIGSGLNGHRPKLMKMLSDPNAHTIVVEH 118
Query 130 RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA 189
RDR FG EYVEAAL AQGR ++VV+ EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct 119 RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMVEVLTSFCARLYGRRSARHRA 178
Query 190 KRAL 193
KRAL
Sbjct 179 KRAL 182
>gi|289571177|ref|ZP_06451404.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544931|gb|EFD48579.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=162
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/159 (67%), Positives = 117/159 (74%), Gaps = 1/159 (0%)
Query 1 LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG 60
+SV C RNR MNLA WAERNGVA AYRWFRAGLL V A+RVGRLILV++PA + R
Sbjct 1 MSVACGRNRDMNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRS 60
Query 61 RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP 120
T VYARVSSADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP
Sbjct 61 PTAVYARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDP 120
Query 121 VVTRIVVEHRDR-FCWFGSEYVEAALVAQGRELVVVDLA 158
V RIVVEHRDR + AQGRELVVVD A
Sbjct 121 SVHRIVVEHRDRVLPGWARSTCRQRFAAQGRELVVVDSA 159
>gi|339290995|gb|AEJ45105.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length=195
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/184 (55%), Positives = 124/184 (68%), Gaps = 3/184 (1%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGR-LILVNDPAVEESGRGRTLVYARVS 69
M L+ WA +NG+ + A+RW + G +PVP ++ ILV +P E S +YARVS
Sbjct 1 MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREP--ESSTANAVALYARVS 58
Query 70 SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH 129
SADQ+ DLDR++AR+ +AT Q L V K V E G LNGHR K LL +P IVVEH
Sbjct 59 SADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPNAHTIVVEH 118
Query 130 RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA 189
RDR FG EYVEAAL AQGR ++VV+ EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct 119 RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA 178
Query 190 KRAL 193
KRAL
Sbjct 179 KRAL 182
>gi|339290736|gb|AEJ44846.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length=195
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/184 (55%), Positives = 123/184 (67%), Gaps = 3/184 (1%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVP-AQRVGRLILVNDPAVEESGRGRTLVYARVS 69
M L+ WA +NG+ + A+RW + G +PVP Q ILV +P E S +YARVS
Sbjct 1 MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREP--ESSTANAVALYARVS 58
Query 70 SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH 129
SADQ+ DLDR++AR+ +AT Q L V K V E G LNGHR K LL +P IVVEH
Sbjct 59 SADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEH 118
Query 130 RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA 189
RDR FG EYVEAAL AQGR ++VV+ EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct 119 RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA 178
Query 190 KRAL 193
KRAL
Sbjct 179 KRAL 182
>gi|158317728|ref|YP_001510236.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
gi|158113133|gb|ABW15330.1| Resolvase domain [Frankia sp. EAN1pec]
Length=162
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/164 (69%), Positives = 125/164 (77%), Gaps = 2/164 (1%)
Query 38 VPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDK 97
+PA+RVG LILV +PA S G T VYARVSSADQ SDLDR+VARV WA ++L V K
Sbjct 1 MPARRVGGLILVEEPA--RSATGMTAVYARVSSADQESDLDRQVARVVTWAAGRNLPVGK 58
Query 98 VVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDL 157
VV E G AL G RR+F ALLGDP V+ IVVEHRDRF FG+EYVEAAL A GR L+VVD
Sbjct 59 VVTEVGSALGGDRREFLALLGDPRVSTIVVEHRDRFARFGAEYVEAALAACGRRLLVVDP 118
Query 158 AEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALAAAVGDAE 201
AEVDDDLV D+TEILTSMCARLYG R A N A+RA+ AA G E
Sbjct 119 AEVDDDLVRDVTEILTSMCARLYGRRGAGNRARRAVEAATGTVE 162
>gi|167969514|ref|ZP_02551791.1| IS1539 resolvase [Mycobacterium tuberculosis H37Ra]
gi|254551957|ref|ZP_05142404.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297635503|ref|ZP_06953283.1| resolvase [Mycobacterium tuberculosis KZN 4207]
25 more sequence titles
Length=195
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/172 (67%), Positives = 133/172 (78%), Gaps = 0/172 (0%)
Query 11 MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS 70
MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA + GRT V AR+SS
Sbjct 1 MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS 60
Query 71 ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR 130
ADQ+ DLDR+V VTAWAT++ + V KVV E G AL G RR F LLGDP V RIV++ R
Sbjct 61 ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR 120
Query 131 DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE 182
DR FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLYG+
Sbjct 121 DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK 172
Lambda K H
0.323 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 223603106580
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40