BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3828c

Length=203
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610964|ref|NP_218345.1|  resolvase [Mycobacterium tuberculos...   402    1e-110
gi|289747670|ref|ZP_06507048.1|  resolvase [Mycobacterium tubercu...   401    3e-110
gi|298527303|ref|ZP_07014712.1|  conserved hypothetical protein [...   399    2e-109
gi|340628797|ref|YP_004747249.1|  putative resolvase [Mycobacteri...   398    3e-109
gi|167969943|ref|ZP_02552220.1|  hypothetical resolvase [Mycobact...   382    2e-104
gi|294993043|ref|ZP_06798734.1|  resolvase [Mycobacterium tubercu...   373    1e-101
gi|326904407|gb|EGE51340.1|  resolvase [Mycobacterium tuberculosi...   294    6e-78 
gi|15609929|ref|NP_217308.1|  resolvase [Mycobacterium tuberculos...   283    1e-74 
gi|289575490|ref|ZP_06455717.1|  resolvase [Mycobacterium tubercu...   282    2e-74 
gi|15607745|ref|NP_215119.1|  resolvase [Mycobacterium tuberculos...   281    5e-74 
gi|31793968|ref|NP_856461.1|  resolvase [Mycobacterium bovis AF21...   281    6e-74 
gi|289446158|ref|ZP_06435902.1|  resolvase [Mycobacterium tubercu...   278    4e-73 
gi|15610116|ref|NP_217495.1|  resolvase [Mycobacterium tuberculos...   275    2e-72 
gi|289444543|ref|ZP_06434287.1|  resolvase [Mycobacterium tubercu...   275    3e-72 
gi|31794155|ref|NP_856648.1|  resolvase [Mycobacterium bovis AF21...   270    9e-71 
gi|254552945|ref|ZP_05143392.1|  resolvase [Mycobacterium tubercu...   270    1e-70 
gi|167969029|ref|ZP_02551306.1|  hypothetical resolvase [Mycobact...   268    3e-70 
gi|306774711|ref|ZP_07413048.1|  resolvase [Mycobacterium tubercu...   267    5e-70 
gi|333921804|ref|YP_004495385.1|  putative resolvase [Amycolicico...   263    8e-69 
gi|333920658|ref|YP_004494239.1|  putative resolvase [Amycolicico...   259    1e-67 
gi|333921217|ref|YP_004494798.1|  putative resolvase [Amycolicico...   253    9e-66 
gi|86741374|ref|YP_481774.1|  resolvase-like protein [Frankia sp....   244    5e-63 
gi|158312541|ref|YP_001505049.1|  resolvase domain-containing pro...   231    7e-59 
gi|289749103|ref|ZP_06508481.1|  resolvase [Mycobacterium tubercu...   226    1e-57 
gi|86742114|ref|YP_482514.1|  resolvase-like protein [Frankia sp....   224    6e-57 
gi|288921956|ref|ZP_06416167.1|  Resolvase domain protein [Franki...   216    1e-54 
gi|315092548|gb|EFT64524.1|  resolvase protein [Propionibacterium...   215    2e-54 
gi|327446282|gb|EGE92936.1|  resolvase protein [Propionibacterium...   214    6e-54 
gi|340627876|ref|YP_004746328.1|  putative resolvase [Mycobacteri...   214    7e-54 
gi|314929732|gb|EFS93563.1|  resolvase protein [Propionibacterium...   214    7e-54 
gi|315081078|gb|EFT53054.1|  resolvase protein [Propionibacterium...   214    8e-54 
gi|314973967|gb|EFT18063.1|  resolvase protein [Propionibacterium...   214    8e-54 
gi|328905690|gb|EGG25468.1|  resolvase [Propionibacterium humerus...   213    1e-53 
gi|240171118|ref|ZP_04749777.1|  putative resolvase [Mycobacteriu...   209    3e-52 
gi|158313451|ref|YP_001505959.1|  resolvase domain-containing pro...   206    2e-51 
gi|148824076|ref|YP_001288829.1|  resolvase [Mycobacterium tuberc...   204    8e-51 
gi|15610023|ref|NP_217402.1|  resolvase [Mycobacterium tuberculos...   203    1e-50 
gi|326904500|gb|EGE51433.1|  resolvase [Mycobacterium tuberculosi...   202    2e-50 
gi|340625932|ref|YP_004744384.1|  putative resolvase [Mycobacteri...   201    7e-50 
gi|15608061|ref|NP_215436.1|  resolvase [Mycobacterium tuberculos...   201    7e-50 
gi|289752977|ref|ZP_06512355.1|  resolvase [Mycobacterium tubercu...   199    2e-49 
gi|295696699|ref|YP_003589937.1|  Resolvase domain-containing pro...   197    6e-49 
gi|167629538|ref|YP_001680037.1|  resolvase, n terminal domain [H...   194    7e-48 
gi|339287910|gb|AEJ42020.1|  Resolvase domain protein [Alicycloba...   192    3e-47 
gi|258512473|ref|YP_003185907.1|  Resolvase domain-containing pro...   191    4e-47 
gi|289571177|ref|ZP_06451404.1|  conserved hypothetical protein [...   191    6e-47 
gi|339290995|gb|AEJ45105.1|  Resolvase domain protein [Alicycloba...   190    1e-46 
gi|339290736|gb|AEJ44846.1|  Resolvase domain protein [Alicycloba...   190    1e-46 
gi|158317728|ref|YP_001510236.1|  resolvase domain-containing pro...   188    4e-46 
gi|167969514|ref|ZP_02551791.1|  IS1539 resolvase [Mycobacterium ...   187    6e-46 


>gi|15610964|ref|NP_218345.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15843452|ref|NP_338489.1| IS1537 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31795002|ref|NP_857495.1| resolvase [Mycobacterium bovis AF2122/97]
 40 more sequence titles
 Length=203

 Score =  402 bits (1034),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 202/203 (99%), Positives = 203/203 (100%), Gaps = 0/203 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            +SVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG
Sbjct  1    MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP
Sbjct  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
            VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY
Sbjct  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180

Query  181  GERAAQNGAKRALAAAVGDAEAA  203
            GERAAQNGAKRALAAAVGDAEAA
Sbjct  181  GERAAQNGAKRALAAAVGDAEAA  203


>gi|289747670|ref|ZP_06507048.1| resolvase [Mycobacterium tuberculosis 02_1987]
 gi|289688198|gb|EFD55686.1| resolvase [Mycobacterium tuberculosis 02_1987]
Length=203

 Score =  401 bits (1030),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 201/203 (99%), Positives = 202/203 (99%), Gaps = 0/203 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            +SVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG
Sbjct  1    MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP
Sbjct  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
            VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDL EVDDDLVGDMTEILTSMCARLY
Sbjct  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLPEVDDDLVGDMTEILTSMCARLY  180

Query  181  GERAAQNGAKRALAAAVGDAEAA  203
            GERAAQNGAKRALAAAVGDAEAA
Sbjct  181  GERAAQNGAKRALAAAVGDAEAA  203


>gi|298527303|ref|ZP_07014712.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497097|gb|EFI32391.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|328460604|gb|AEB06027.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201

 Score =  399 bits (1024),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 200/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%)

Query  3    VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT  62
            +VCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT
Sbjct  1    MVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT  60

Query  63   LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV  122
            LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV
Sbjct  61   LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV  120

Query  123  TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE  182
            TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE
Sbjct  121  TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE  180

Query  183  RAAQNGAKRALAAAVGDAEAA  203
            RAAQNGAKRALAAAVGDAEAA
Sbjct  181  RAAQNGAKRALAAAVGDAEAA  201


>gi|340628797|ref|YP_004747249.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340006987|emb|CCC46178.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=203

 Score =  398 bits (1022),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 199/203 (99%), Positives = 201/203 (99%), Gaps = 0/203 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            +SVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG
Sbjct  1    MSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RT+VYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP
Sbjct  61   RTVVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
            VVTRIV EHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDM EILTSMCARLY
Sbjct  121  VVTRIVAEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMIEILTSMCARLY  180

Query  181  GERAAQNGAKRALAAAVGDAEAA  203
            GERAAQNGAKRALAAAVGDAEAA
Sbjct  181  GERAAQNGAKRALAAAVGDAEAA  203


>gi|167969943|ref|ZP_02552220.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
 gi|297636511|ref|ZP_06954291.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 gi|297733506|ref|ZP_06962624.1| resolvase [Mycobacterium tuberculosis KZN R506]
 26 more sequence titles
 Length=193

 Score =  382 bits (981),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 193/193 (100%), Positives = 193/193 (100%), Gaps = 0/193 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS
Sbjct  1    MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR
Sbjct  61   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK
Sbjct  121  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  180

Query  191  RALAAAVGDAEAA  203
            RALAAAVGDAEAA
Sbjct  181  RALAAAVGDAEAA  193


>gi|294993043|ref|ZP_06798734.1| resolvase [Mycobacterium tuberculosis 210]
 gi|339296637|gb|AEJ48748.1| resolvase [Mycobacterium tuberculosis CCDC5079]
 gi|339300234|gb|AEJ52344.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=189

 Score =  373 bits (957),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 188/189 (99%), Positives = 189/189 (100%), Gaps = 0/189 (0%)

Query  15   VWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR  74
            +WAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR
Sbjct  1    MWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR  60

Query  75   SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC  134
            SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC
Sbjct  61   SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC  120

Query  135  WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALA  194
            WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALA
Sbjct  121  WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALA  180

Query  195  AAVGDAEAA  203
            AAVGDAEAA
Sbjct  181  AAVGDAEAA  189


>gi|326904407|gb|EGE51340.1| resolvase [Mycobacterium tuberculosis W-148]
 gi|328457897|gb|AEB03320.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201

 Score =  294 bits (752),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 146/185 (79%), Positives = 158/185 (86%), Gaps = 0/185 (0%)

Query  3    VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT  62
            + CCRN  MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT
Sbjct  1    MACCRNNSMNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRART  60

Query  63   LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV  122
             VYARVSSADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V
Sbjct  61   AVYARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSV  120

Query  123  TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE  182
             RIVVEHRDRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+
Sbjct  121  KRIVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  180

Query  183  RAAQN  187
            RAAQN
Sbjct  181  RAAQN  185


>gi|15609929|ref|NP_217308.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842330|ref|NP_337367.1| IS1602 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|121638672|ref|YP_978896.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 74 more sequence titles
 Length=193

 Score =  283 bits (724),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 142/177 (81%), Positives = 153/177 (87%), Gaps = 0/177 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN  187
            DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177


>gi|289575490|ref|ZP_06455717.1| resolvase [Mycobacterium tuberculosis K85]
 gi|289539921|gb|EFD44499.1| resolvase [Mycobacterium tuberculosis K85]
Length=193

 Score =  282 bits (722),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 141/177 (80%), Positives = 153/177 (87%), Gaps = 0/177 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLAVWAERNG+A V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  1    MNLAVWAERNGIARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN  187
            DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177


>gi|15607745|ref|NP_215119.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15840006|ref|NP_335043.1| IS1536 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31791787|ref|NP_854280.1| resolvase [Mycobacterium bovis AF2122/97]
 39 more sequence titles
 Length=202

 Score =  281 bits (718),  Expect = 5e-74, Method: Compositional matrix adjust.
 Identities = 142/185 (77%), Positives = 157/185 (85%), Gaps = 0/185 (0%)

Query  3    VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT  62
            + CCRNR MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E   + +T
Sbjct  1    MACCRNRGMNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKT  60

Query  63   LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV  122
             VYARVSSADQ+SDLDR+VARVT+WAT++ + VDKVV E G  LNGHRRKF A+L D  V
Sbjct  61   AVYARVSSADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSV  120

Query  123  TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE  182
            TRIVVEHRDRFC FGSEYV AAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+
Sbjct  121  TRIVVEHRDRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGK  180

Query  183  RAAQN  187
            RAAQN
Sbjct  181  RAAQN  185


>gi|31793968|ref|NP_856461.1| resolvase [Mycobacterium bovis AF2122/97]
 gi|31619562|emb|CAD95000.1| POSSIBLE RESOLVASE [Mycobacterium bovis AF2122/97]
Length=193

 Score =  281 bits (718),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 141/177 (80%), Positives = 152/177 (86%), Gaps = 0/177 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLAVWAERNGVA V  YRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  1    MNLAVWAERNGVARVTVYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATAEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN  187
            DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177


>gi|289446158|ref|ZP_06435902.1| resolvase [Mycobacterium tuberculosis CPHL_A]
 gi|289419116|gb|EFD16317.1| resolvase [Mycobacterium tuberculosis CPHL_A]
Length=202

 Score =  278 bits (710),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 141/185 (77%), Positives = 156/185 (85%), Gaps = 0/185 (0%)

Query  3    VVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRT  62
            + CCRNR MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E   + +T
Sbjct  1    MACCRNRGMNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKT  60

Query  63   LVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVV  122
             VYARVSSADQ+SDLDR+VARVT+WAT++ + VDKVV E G  LNGHRRKF A+L D  V
Sbjct  61   AVYARVSSADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSV  120

Query  123  TRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE  182
            TRIVVEHRDRFC FGSEYV AAL AQGRELVVVD AE DDDLV DMTEILTSMCARLYG+
Sbjct  121  TRIVVEHRDRFCRFGSEYVHAALAAQGRELVVVDSAEGDDDLVWDMTEILTSMCARLYGK  180

Query  183  RAAQN  187
            RAAQN
Sbjct  181  RAAQN  185


>gi|15610116|ref|NP_217495.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842533|ref|NP_337570.1| IS1538 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|148662829|ref|YP_001284352.1| IS1538 resolvase [Mycobacterium tuberculosis H37Ra]
 47 more sequence titles
 Length=194

 Score =  275 bits (703),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 145/194 (75%), Positives = 159/194 (82%), Gaps = 1/194 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DRFC  GS+YV+AA  AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N  K
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  191  RALAAAVG-DAEAA  203
            RALAAA G D EAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|289444543|ref|ZP_06434287.1| resolvase [Mycobacterium tuberculosis T46]
 gi|289448651|ref|ZP_06438395.1| resolvase [Mycobacterium tuberculosis CPHL_A]
 gi|289575686|ref|ZP_06455913.1| resolvase [Mycobacterium tuberculosis K85]
 23 more sequence titles
 Length=194

 Score =  275 bits (703),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 145/194 (75%), Positives = 159/194 (82%), Gaps = 1/194 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  1    MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DRFC  GS+YV+AA  AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAA+N  K
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  191  RALAAAVG-DAEAA  203
            RALAAA G D EAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|31794155|ref|NP_856648.1| resolvase [Mycobacterium bovis AF2122/97]
 gi|121638860|ref|YP_979084.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224991352|ref|YP_002646041.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31619750|emb|CAD96690.1| PROBABLE RESOLVASE [Mycobacterium bovis AF2122/97]
 gi|121494508|emb|CAL72989.1| Probable resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224774467|dbj|BAH27273.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341602899|emb|CCC65577.1| probable resolvase [Mycobacterium bovis BCG str. Moreau RDJ]
Length=194

 Score =  270 bits (690),  Expect = 9e-71, Method: Compositional matrix adjust.
 Identities = 143/194 (74%), Positives = 157/194 (81%), Gaps = 1/194 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R  T VYARVSS
Sbjct  1    MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ++DLDR+VARVTAWA +Q + VDKVV E G A N HRRKF +LL DP V RIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWAAAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DRFC  GS+YV+AA  AQGRELVVVD AEV DDLV DMTEILTSMCARLYG+RAA+N  K
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVGDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  191  RALAAAVG-DAEAA  203
            RALAAA G D EAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|254552945|ref|ZP_05143392.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=158

 Score =  270 bits (689),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 133/137 (98%), Positives = 135/137 (99%), Gaps = 0/137 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS
Sbjct  1    MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR
Sbjct  61   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVA  147
            DRFCWFGSEYVE  L++
Sbjct  121  DRFCWFGSEYVERPLLS  137


>gi|167969029|ref|ZP_02551306.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
 gi|254230942|ref|ZP_04924269.1| hypothetical protein TBCG_00600 [Mycobacterium tuberculosis C]
 gi|254549562|ref|ZP_05140009.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 26 more sequence titles
 Length=194

 Score =  268 bits (686),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 137/177 (78%), Positives = 151/177 (86%), Gaps = 0/177 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E   + +T VYARVSS
Sbjct  1    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+SDLDR+VARVT+WAT++ + VDKVV E G  LNGHRRKF A+L D  VTRIVVEHR
Sbjct  61   ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN  187
            DRFC FGSEYV AAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct  121  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN  177


>gi|306774711|ref|ZP_07413048.1| resolvase [Mycobacterium tuberculosis SUMu001]
 gi|306970815|ref|ZP_07483476.1| resolvase [Mycobacterium tuberculosis SUMu010]
 gi|307078538|ref|ZP_07487708.1| resolvase [Mycobacterium tuberculosis SUMu011]
 gi|308216606|gb|EFO76005.1| resolvase [Mycobacterium tuberculosis SUMu001]
 gi|308359602|gb|EFP48453.1| resolvase [Mycobacterium tuberculosis SUMu010]
 gi|308363530|gb|EFP52381.1| resolvase [Mycobacterium tuberculosis SUMu011]
Length=194

 Score =  267 bits (683),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 137/177 (78%), Positives = 151/177 (86%), Gaps = 0/177 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAERNGVA V AYRWF AGLLPVPA++VGRLILV++ A E   + +T VYARVSS
Sbjct  1    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+SDLDR+VARVT+WAT++ + VDKVV E G  LNGHRRKF A+L D  VTRIVVEHR
Sbjct  61   ADQKSDLDRQVARVTSWATAEPIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN  187
            DRFC FGSEYV AAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct  121  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN  177


>gi|333921804|ref|YP_004495385.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333484025|gb|AEF42585.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=195

 Score =  263 bits (673),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 130/171 (77%), Positives = 144/171 (85%), Gaps = 0/171 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WA+RNGVA V AYRWFR+GLLPVPA++VGRLILV+DPA E    G T VYARVSS
Sbjct  1    MNLATWAQRNGVARVTAYRWFRSGLLPVPARKVGRLILVDDPAAEMQSSGCTAVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ++DL R+VARVTAWAT + + VDKVV E G ALNGHRRKF ALL DP + RIVVEHR
Sbjct  61   ADQKADLHRQVARVTAWATDRRIPVDKVVTEVGSALNGHRRKFLALLRDPSIARIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            DRFC FGSEYV+AAL A GRELVV+D +EVDDDLV DMTEILTSMCARLY 
Sbjct  121  DRFCRFGSEYVQAALAAHGRELVVIDSSEVDDDLVRDMTEILTSMCARLYS  171


>gi|333920658|ref|YP_004494239.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333482879|gb|AEF41439.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215

 Score =  259 bits (663),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 140/201 (70%), Positives = 154/201 (77%), Gaps = 0/201 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            LSVVC     MNLA WA+RNGVA V AYRWFR+G LPVPA++ G LILV DP       G
Sbjct  11   LSVVCGTTEHMNLATWAQRNGVARVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHG  70

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RT VYA VSSADQ++ LDR+VARVTAWA S+ + V KVV E G ALNGHR KF ALL DP
Sbjct  71   RTAVYAGVSSADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDP  130

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
            +VTRIVVEHRDRFC FGSEYV+AAL A G  LVVVD  EVDDDLV DMTEILTSMCARLY
Sbjct  131  IVTRIVVEHRDRFCRFGSEYVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLY  190

Query  181  GERAAQNGAKRALAAAVGDAE  201
            G+RAA + AKRA+AA   D  
Sbjct  191  GKRAAVHRAKRAVAATADDTS  211


>gi|333921217|ref|YP_004494798.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333483438|gb|AEF41998.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215

 Score =  253 bits (647),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 138/201 (69%), Positives = 152/201 (76%), Gaps = 0/201 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            LSVVC     MNLA WA+RNGV  V AYRWFR+G LPVPA++ G LILV DP       G
Sbjct  11   LSVVCGTTGHMNLATWAQRNGVGRVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHG  70

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RT VYA VSSADQ++ LDR+VARVTAWA S+ + V KVV E G ALNGHR KF ALL DP
Sbjct  71   RTAVYAGVSSADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDP  130

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
            +VTRIVVEHRDRFC FGSE V+AAL A G  LVVVD  EVDDDLV DMTEILTSMCARLY
Sbjct  131  IVTRIVVEHRDRFCRFGSECVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLY  190

Query  181  GERAAQNGAKRALAAAVGDAE  201
            G+RAA + AKRA+AA   D  
Sbjct  191  GKRAAVHRAKRAVAATADDTS  211


>gi|86741374|ref|YP_481774.1| resolvase-like protein [Frankia sp. CcI3]
 gi|86568236|gb|ABD12045.1| Resolvase-like [Frankia sp. CcI3]
Length=190

 Score =  244 bits (623),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 129/177 (73%), Positives = 142/177 (81%), Gaps = 1/177 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNL  WAE  GVA+V A RW+ AG LPVPA+RVG LILV +P  + +G G T VYARVSS
Sbjct  1    MNLKEWAESQGVAYVTARRWYAAGKLPVPARRVGGLILVGEPD-QPTGDGLTAVYARVSS  59

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQR DLDR+VARVTAWAT Q+L VDKVV E G ALNGHRRKF ALL DP V  IVVE+R
Sbjct  60   ADQRPDLDRQVARVTAWATGQNLPVDKVVTEVGSALNGHRRKFLALLRDPDVATIVVEYR  119

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN  187
            DRF  FG+EYVEAAL AQGR L+VVD  EVDDDLVGD+TEILTS+CARLYG RAA N
Sbjct  120  DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYGRRAAVN  176


>gi|158312541|ref|YP_001505049.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158317424|ref|YP_001509932.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158107946|gb|ABW10143.1| Resolvase domain [Frankia sp. EAN1pec]
 gi|158112829|gb|ABW15026.1| Resolvase domain [Frankia sp. EAN1pec]
Length=190

 Score =  231 bits (588),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 121/171 (71%), Positives = 133/171 (78%), Gaps = 1/171 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNL  WAE  GVA+V A RWF AG LPVPA++VG LILV +P    +  G  +VYARVSS
Sbjct  1    MNLKEWAESQGVAYVTAQRWFHAGKLPVPARKVGGLILVGEPD-RPATSGTVVVYARVSS  59

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+SDLDR+VA VT WAT Q L VD+VV E G ALNGHRRKF ALL DP  T IVVEHR
Sbjct  60   ADQKSDLDRQVACVTGWATGQGLPVDRVVTEVGSALNGHRRKFLALLRDPAATTIVVEHR  119

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            DRF  FG+EYVEAAL A GR L+VVD AEVDDDLV D+TEILTSMCARLYG
Sbjct  120  DRFARFGAEYVEAALAANGRRLLVVDPAEVDDDLVRDITEILTSMCARLYG  170


>gi|289749103|ref|ZP_06508481.1| resolvase [Mycobacterium tuberculosis T92]
 gi|289689690|gb|EFD57119.1| resolvase [Mycobacterium tuberculosis T92]
Length=172

 Score =  226 bits (577),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 116/154 (76%), Positives = 130/154 (85%), Gaps = 0/154 (0%)

Query  34   GLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDRRVARVTAWATSQHL  93
            G  PVPA++VGRLILV++ A E   + +T VYARVSSADQ+SDLDR+VARVT+WAT++ +
Sbjct  2    GSCPVPARKVGRLILVDELASEAGAQPKTAVYARVSSADQKSDLDRQVARVTSWATAEQI  61

Query  94   SVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSEYVEAALVAQGRELV  153
             VDKVV E G  LNGHRRKF A+L D  VTRIVVEHRDRFC FGSEYV AAL AQGRELV
Sbjct  62   PVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHRDRFCRFGSEYVHAALAAQGRELV  121

Query  154  VVDLAEVDDDLVGDMTEILTSMCARLYGERAAQN  187
            VVD AEVDDDLV DMTEILTSMCARLYG+RAAQN
Sbjct  122  VVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN  155


>gi|86742114|ref|YP_482514.1| resolvase-like protein [Frankia sp. CcI3]
 gi|86568976|gb|ABD12785.1| Resolvase-like [Frankia sp. CcI3]
Length=197

 Score =  224 bits (571),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 114/171 (67%), Positives = 134/171 (79%), Gaps = 1/171 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            +NL  WA  NGV +  A RW+R GLLPVPA++VG L+LV++  V  +GR   +VYARVSS
Sbjct  8    VNLKEWAAANGVGYTTARRWYRDGLLPVPARKVGGLVLVDESTVP-AGRPVAVVYARVSS  66

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+ DLDR+VAR+  WA SQ+L+V +VV E G ALNGHRRKF  LL DP V  IVVEHR
Sbjct  67   ADQKPDLDRQVARIVTWAASQNLAVGRVVTEVGSALNGHRRKFLGLLRDPAVATIVVEHR  126

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            DRF  FG+EYVEAAL AQGR L+VVD  EVDDDLVGD+TEILTS+CARLYG
Sbjct  127  DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYG  177


>gi|288921956|ref|ZP_06416167.1| Resolvase domain protein [Frankia sp. EUN1f]
 gi|288346714|gb|EFC81032.1| Resolvase domain protein [Frankia sp. EUN1f]
Length=179

 Score =  216 bits (551),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 114/157 (73%), Positives = 126/157 (81%), Gaps = 1/157 (0%)

Query  25   VIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDRRVARV  84
            V AYRWFR G LPVPA+RVGRLILV   AVE    G T+VYARVSSADQ+SDLDR+VARV
Sbjct  4    VTAYRWFREGKLPVPARRVGRLILVEPDAVERPA-GLTVVYARVSSADQKSDLDRQVARV  62

Query  85   TAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSEYVEAA  144
            T WAT Q  +VD+VV E G ALNGHRRKF ALL DP V+ IVVEHR +F  FG+E VEAA
Sbjct  63   TGWATGQGRAVDRVVTEVGSALNGHRRKFLALLRDPDVSTIVVEHRGKFARFGAENVEAA  122

Query  145  LVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            L A GREL+VVD AEVDDDLV DMTEILTS+C R+YG
Sbjct  123  LAANGRELLVVDPAEVDDDLVRDMTEILTSLCVRMYG  159


>gi|315092548|gb|EFT64524.1| resolvase protein [Propionibacterium acnes HL110PA4]
Length=206

 Score =  215 bits (548),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 110/203 (55%), Positives = 145/203 (72%), Gaps = 13/203 (6%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR  61
            MNL  WA   G+++  A RW+  GL+PVP  RVGRL+LV+    +E G           +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVD---CDEHGLPFEGSTFEPTK  57

Query  62   TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV  121
            T++YARVSSADQ+SDLDR++ARV  WA+++ LSVD VV E G  L+GHR+KF  LL D  
Sbjct  58   TIIYARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGS  117

Query  122  VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            V  I+VEHRDRFC FGSEY+EAAL AQ R L+VVD  E++DDLV DMT++LTSMCARLYG
Sbjct  118  VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG  177

Query  182  ERAAQNGAKRALAAA-VGDAEAA  203
            +R+A++ A++A+    + D E +
Sbjct  178  KRSAKHRARKAVETVMITDGEES  200


>gi|327446282|gb|EGE92936.1| resolvase protein [Propionibacterium acnes HL043PA1]
 gi|327451294|gb|EGE97948.1| resolvase protein [Propionibacterium acnes HL043PA2]
Length=206

 Score =  214 bits (545),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 108/192 (57%), Positives = 142/192 (74%), Gaps = 12/192 (6%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR  61
            MNL  WA   G+++  A RW+  GL+PVP +RVGRL+LV+    +E G           +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVD---CDEHGLPFEGSTFEPTK  57

Query  62   TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV  121
            T++YARVSSADQ+SDLDR++ARV  WA+++ LSVD VV E G  L+GHR+KF  LL D  
Sbjct  58   TIIYARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGS  117

Query  122  VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            V  I+VEHRDRFC FGSEY+EAAL AQ R L+VVD  E++DDLV DMT++LTSMCARLYG
Sbjct  118  VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG  177

Query  182  ERAAQNGAKRAL  193
            +R+A++ A++A+
Sbjct  178  KRSAKHRARKAV  189


>gi|340627876|ref|YP_004746328.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340006066|emb|CCC45238.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=295

 Score =  214 bits (544),  Expect = 7e-54, Method: Compositional matrix adjust.
 Identities = 122/182 (68%), Positives = 140/182 (77%), Gaps = 0/182 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            LSVVCCRN  MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA +    G
Sbjct  91   LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG  150

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RT V AR+SSADQ+ DLDR+V  VTAWAT++ + V KVV E G AL G RR F  LLGDP
Sbjct  151  RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP  210

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
             V RIV++ RDR   FG E V+A L A GRELVVVD A+ DDD+VGD+TEILTSMCARLY
Sbjct  211  TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADGDDDVVGDITEILTSMCARLY  270

Query  181  GE  182
            G+
Sbjct  271  GK  272


>gi|314929732|gb|EFS93563.1| resolvase protein [Propionibacterium acnes HL044PA1]
Length=206

 Score =  214 bits (544),  Expect = 7e-54, Method: Compositional matrix adjust.
 Identities = 107/196 (55%), Positives = 141/196 (72%), Gaps = 12/196 (6%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR  61
            MNL  WA   G+++  A RW+  GL+PVP  RVGRL+LV+    +E G           +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVD---CDEHGLPFEGSTPEPTK  57

Query  62   TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV  121
            T++YARV SADQ+ DLDR++ARV  WA+++ LSVD VV E G  L+GHR+KF  LL D  
Sbjct  58   TIIYARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGS  117

Query  122  VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            V  I+VEHRDRFC FGSEY+EAAL AQ R L+VVD  E++DDLV DMT++LTSMCARLYG
Sbjct  118  VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG  177

Query  182  ERAAQNGAKRALAAAV  197
            +R+A++ A++A+  A+
Sbjct  178  KRSAKHRARKAMETAM  193


>gi|315081078|gb|EFT53054.1| resolvase protein [Propionibacterium acnes HL078PA1]
Length=206

 Score =  214 bits (544),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 110/193 (57%), Positives = 142/193 (74%), Gaps = 6/193 (3%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVN----DPAVEESGRGRT--LV  64
            MNL  WA   G+++  A RW+  GL+PVP +RVGRL+LV+        E S  G T  ++
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFGPTKVII  60

Query  65   YARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTR  124
            YARVSSADQ+SDLDR++ARV  WA+++ LSVD VV E G  L+GHR+KF  LL D  V  
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT  120

Query  125  IVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERA  184
            I+VEHRDRFC FGSEY+EAAL AQ R LVVVD  E++DDLV DMT++LTSMCARLYG+R+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  185  AQNGAKRALAAAV  197
            A++ A++A+   +
Sbjct  181  AKHRARKAVETVM  193


>gi|314973967|gb|EFT18063.1| resolvase protein [Propionibacterium acnes HL053PA1]
Length=206

 Score =  214 bits (544),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 108/196 (56%), Positives = 143/196 (73%), Gaps = 12/196 (6%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR  61
            MNL  WA   G+++  A RW+  GL+PVP +RVGRL+LV+    +E G           +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVD---CDEHGLPFEGSTFEPTK  57

Query  62   TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV  121
            T++YARVSSADQ+SDLDR++ARV  WA+++ LSVD VV E G  L+GHR+KF  LL D  
Sbjct  58   TIIYARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGS  117

Query  122  VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            V  I+VEHRDRFC FGSEY+EAAL AQ R LVVVD  E+++DLV DMT++LTSMCARLYG
Sbjct  118  VRTILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIENDLVQDMTDVLTSMCARLYG  177

Query  182  ERAAQNGAKRALAAAV  197
            +R+A++ A++A+   +
Sbjct  178  KRSAKHRARKAVETVM  193


>gi|328905690|gb|EGG25468.1| resolvase [Propionibacterium humerusii P08]
Length=206

 Score =  213 bits (542),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 107/196 (55%), Positives = 141/196 (72%), Gaps = 12/196 (6%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESG---------RGR  61
            MNL  WA   G+++  A RW+  GL+PVP  RVGRL+LV+    +E G           +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVD---CDEHGLPFEGSTPEPTK  57

Query  62   TLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPV  121
            T++YARV SADQ+ DLDR++ARV  WA+++ LSVD VV E G  L+GHR+KF  LL D  
Sbjct  58   TIIYARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGS  117

Query  122  VTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            V  I+VEHRDRFC FGSEY+EAAL AQ R L+VVD  E++DDLV DMT++LTSMCARLYG
Sbjct  118  VRTILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYG  177

Query  182  ERAAQNGAKRALAAAV  197
            +R+A++ A++A+  A+
Sbjct  178  KRSAKHRARKAVETAM  193


>gi|240171118|ref|ZP_04749777.1| putative resolvase [Mycobacterium kansasii ATCC 12478]
 gi|296165344|ref|ZP_06847885.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899235|gb|EFG78700.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=193

 Score =  209 bits (531),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 117/193 (61%), Positives = 130/193 (68%), Gaps = 0/193 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAE  GV    AYRWFR G LPVPA+RVGRLILV   A         +VYARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKAAASVSGAAATVVVYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
             DQRSDLDR+VARVTAWAT + L V +VV E G  LNG R K   +L DP    IVVEHR
Sbjct  61   HDQRSDLDRQVARVTAWATERDLEVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DR   FG E++EAAL AQGR +VV D  E  DDLV DM E+LTSMCARLYG R A+N A 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVRDMIEVLTSMCARLYGRRGARNRAM  180

Query  191  RALAAAVGDAEAA  203
            RA+ A   +  AA
Sbjct  181  RAVTATKREPGAA  193


>gi|158313451|ref|YP_001505959.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158108856|gb|ABW11053.1| Resolvase domain [Frankia sp. EAN1pec]
Length=182

 Score =  206 bits (523),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 108/162 (67%), Positives = 125/162 (78%), Gaps = 1/162 (0%)

Query  20   NGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDR  79
            NGV +  A +WF  G LPVPA+RVG LILV++PA      G  +VYA VSSADQ SDLDR
Sbjct  2    NGVGYSTARQWFLDGRLPVPARRVGGLILVDEPA-RSVPSGTVVVYACVSSADQESDLDR  60

Query  80   RVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSE  139
            +VAR+  W   ++L+V KVV E G AL+GHRR+F ALL DP VT IVVEHRDRF WFG+E
Sbjct  61   QVARIVRWTAGENLAVGKVVTEVGSALDGHRREFLALLRDPEVTTIVVEHRDRFAWFGAE  120

Query  140  YVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYG  181
            YVEAAL A GR L+VVD +EVDDDLV D+TEILTSMCARLYG
Sbjct  121  YVEAALAASGRRLLVVDPSEVDDDLVRDITEILTSMCARLYG  162


>gi|148824076|ref|YP_001288829.1| resolvase [Mycobacterium tuberculosis F11]
 gi|148722603|gb|ABR07228.1| hypothetical resolvase [Mycobacterium tuberculosis F11]
Length=295

 Score =  204 bits (518),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 122/182 (68%), Positives = 142/182 (79%), Gaps = 0/182 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            LSVVCCRN  MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA +    G
Sbjct  91   LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG  150

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RT+V AR+SSADQ+ DLDR+V  VTAWAT++ + V KVV E G AL G RR F  LLGDP
Sbjct  151  RTVVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP  210

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
             V RIV++ RDR   FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLY
Sbjct  211  TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY  270

Query  181  GE  182
            G+
Sbjct  271  GK  272


>gi|15610023|ref|NP_217402.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842428|ref|NP_337465.1| IS1539 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31794062|ref|NP_856555.1| resolvase [Mycobacterium bovis AF2122/97]
 43 more sequence titles
 Length=295

 Score =  203 bits (516),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 122/182 (68%), Positives = 141/182 (78%), Gaps = 0/182 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            LSVVCCRN  MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA +    G
Sbjct  91   LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG  150

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RT V AR+SSADQ+ DLDR+V  VTAWAT++ + V KVV E G AL G RR F  LLGDP
Sbjct  151  RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP  210

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
             V RIV++ RDR   FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLY
Sbjct  211  TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY  270

Query  181  GE  182
            G+
Sbjct  271  GK  272


>gi|326904500|gb|EGE51433.1| resolvase [Mycobacterium tuberculosis W-148]
 gi|328457800|gb|AEB03223.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 gi|339295724|gb|AEJ47835.1| resolvase [Mycobacterium tuberculosis CCDC5079]
 gi|339299340|gb|AEJ51450.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=223

 Score =  202 bits (515),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 122/182 (68%), Positives = 141/182 (78%), Gaps = 0/182 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            LSVVCCRN  MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA +    G
Sbjct  19   LSVVCCRNGSMNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWG  78

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
            RT V AR+SSADQ+ DLDR+V  VTAWAT++ + V KVV E G AL G RR F  LLGDP
Sbjct  79   RTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDP  138

Query  121  VVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLY  180
             V RIV++ RDR   FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLY
Sbjct  139  TVRRIVMKRRDRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLY  198

Query  181  GE  182
            G+
Sbjct  199  GK  200


>gi|340625932|ref|YP_004744384.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340004122|emb|CCC43259.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=193

 Score =  201 bits (510),  Expect = 7e-50, Method: Compositional matrix adjust.
 Identities = 111/186 (60%), Positives = 127/186 (69%), Gaps = 0/186 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAE  GV    AYRWFR G LPVPA+RVGRLILV   A   +     ++YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
             D+RSDLDR+VAR+TAWAT + L V +VV E G  LNG R K   +L DP    IVVEHR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVREVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DR   FG E++EAAL AQGR +VV D  E  DDLV DM E+LT MCARLYG R A+N A 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  191  RALAAA  196
            RA+  A
Sbjct  181  RAVTEA  186


>gi|15608061|ref|NP_215436.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15840344|ref|NP_335381.1| IS1535 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31792109|ref|NP_854602.1| resolvase [Mycobacterium bovis AF2122/97]
 74 more sequence titles
 Length=193

 Score =  201 bits (510),  Expect = 7e-50, Method: Compositional matrix adjust.
 Identities = 111/186 (60%), Positives = 127/186 (69%), Gaps = 0/186 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAE  GV    AYRWFR G LPVPA+RVGRLILV   A   +     ++YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
             D+RSDLDR+VAR+TAWAT + L V +VV E G  LNG R K   +L DP    IVVEHR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DR   FG E++EAAL AQGR +VV D  E  DDLV DM E+LT MCARLYG R A+N A 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  191  RALAAA  196
            RA+  A
Sbjct  181  RAVTEA  186


>gi|289752977|ref|ZP_06512355.1| resolvase [Mycobacterium tuberculosis EAS054]
 gi|289693564|gb|EFD60993.1| resolvase [Mycobacterium tuberculosis EAS054]
Length=193

 Score =  199 bits (506),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 110/186 (60%), Positives = 127/186 (69%), Gaps = 0/186 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNLA WAE  GV    AYRWFR G LPVPA+RVGRLILV   A   +     ++YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
             D+RSDLDR+VAR+TAWAT + L V +VV E G  LNG R K   +L DP    IVV+HR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVKHR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190
            DR   FG E++EAAL AQGR +VV D  E  DDLV DM E+LT MCARLYG R A+N A 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  191  RALAAA  196
            RA+  A
Sbjct  181  RAVTEA  186


>gi|295696699|ref|YP_003589937.1| Resolvase domain-containing protein [Bacillus tusciae DSM 2912]
 gi|295412301|gb|ADG06793.1| Resolvase domain protein [Bacillus tusciae DSM 2912]
Length=192

 Score =  197 bits (502),  Expect = 6e-49, Method: Compositional matrix adjust.
 Identities = 106/194 (55%), Positives = 134/194 (70%), Gaps = 3/194 (1%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPA-QRVGRLILVNDPAVEESGRGRTLVYARVS  69
            M L+ WA + G++++ A+RW++ G LPVPA Q     ILV+ P   + GR  T+VYARVS
Sbjct  1    MKLSDWARQQGISYMTAWRWWKDGKLPVPARQTESGTILVDVPPSRKDGR--TVVYARVS  58

Query  70   SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH  129
            S DQRSDLDR+V+R+T WAT + L VD+VV E G  +NG R K   +L D  VT I+VEH
Sbjct  59   SHDQRSDLDRQVSRITQWATERDLVVDEVVTEVGSGMNGKRPKLRRILADARVTTIIVEH  118

Query  130  RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA  189
            RDR   FG EY+E+AL AQGR +VVVD  E  DDLV DM E+LTS CARLYG R A+N A
Sbjct  119  RDRLARFGVEYLESALAAQGRHIVVVDSGETRDDLVRDMIEVLTSFCARLYGRRGARNRA  178

Query  190  KRALAAAVGDAEAA  203
             RA+ AA  D + +
Sbjct  179  LRAVTAAKKDGKES  192


>gi|167629538|ref|YP_001680037.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
 gi|167592278|gb|ABZ84026.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
Length=188

 Score =  194 bits (492),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 102/186 (55%), Positives = 128/186 (69%), Gaps = 4/186 (2%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPA-QRVGRLILVNDPAVEESGRGRTLVYARVS  69
            M L+ WA++NG+ +  A++WF+AG LPVPA Q     IL+ +    E   G+  +YARVS
Sbjct  1    MKLSEWAKKNGITYRTAWQWFKAGKLPVPAVQMPTGTILIQEGGKHE---GKVALYARVS  57

Query  70   SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH  129
            SADQ+SDLDR+V+R+  +A  Q   V + V E G  LNG R K   LL DP V  IVVEH
Sbjct  58   SADQKSDLDRQVSRLLTYANEQGWDVGEAVTEIGSGLNGRRPKLMKLLADPKVKVIVVEH  117

Query  130  RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA  189
            RDR   FG EYVE+ALVAQGR +VVVD +E+ DDLV DM E+LTS CARLYG R+A N A
Sbjct  118  RDRLMRFGFEYVESALVAQGRRIVVVDQSELKDDLVQDMIEVLTSFCARLYGRRSAANKA  177

Query  190  KRALAA  195
            K+A+ A
Sbjct  178  KKAMEA  183


>gi|339287910|gb|AEJ42020.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=208

 Score =  192 bits (487),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 100/184 (55%), Positives = 126/184 (69%), Gaps = 3/184 (1%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGR-LILVNDPAVEESGRGRTLVYARVS  69
            M L+ WA +NG+ +  A+RW + G +PVP ++     ILV++P  E S      +YARVS
Sbjct  14   MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--ESSTENAVALYARVS  71

Query  70   SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH  129
            SADQ++DLDR++AR+  +AT Q L V K V E G  LNGHR K   LL +P    IVVEH
Sbjct  72   SADQKADLDRQIARLMEFATEQKLVVVKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEH  131

Query  130  RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA  189
            RDR   FG EYVEAAL AQGR ++VV+  EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct  132  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA  191

Query  190  KRAL  193
            KRAL
Sbjct  192  KRAL  195


>gi|258512473|ref|YP_003185907.1| Resolvase domain-containing protein [Alicyclobacillus acidocaldarius 
subsp. acidocaldarius DSM 446]
 gi|257479199|gb|ACV59518.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius DSM 446]
Length=195

 Score =  191 bits (486),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 100/184 (55%), Positives = 126/184 (69%), Gaps = 3/184 (1%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVP-AQRVGRLILVNDPAVEESGRGRTLVYARVS  69
            M L+ WA +NG+++  A+RW + G +PVP  Q     ILV++P  E S      +YARVS
Sbjct  1    MKLSDWARKNGISYKTAWRWVKEGRMPVPFEQTPSGTILVHEP--EPSTTNAVALYARVS  58

Query  70   SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH  129
            SADQ++DLDR++AR+  +A +Q L V K V E G  LNGHR K   +L DP    IVVEH
Sbjct  59   SADQKADLDRQIARLMEFAMAQKLVVVKAVTEIGSGLNGHRPKLMKMLSDPNAHTIVVEH  118

Query  130  RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA  189
            RDR   FG EYVEAAL AQGR ++VV+  EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct  119  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMVEVLTSFCARLYGRRSARHRA  178

Query  190  KRAL  193
            KRAL
Sbjct  179  KRAL  182


>gi|289571177|ref|ZP_06451404.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289544931|gb|EFD48579.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=162

 Score =  191 bits (485),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 105/159 (67%), Positives = 117/159 (74%), Gaps = 1/159 (0%)

Query  1    LSVVCCRNRWMNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRG  60
            +SV C RNR MNLA WAERNGVA   AYRWFRAGLL V A+RVGRLILV++PA +   R 
Sbjct  1    MSVACGRNRDMNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRS  60

Query  61   RTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDP  120
             T VYARVSSADQ++DLDR+VARVTAWAT+Q + VDKVV E G A N HRRKF +LL DP
Sbjct  61   PTAVYARVSSADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDP  120

Query  121  VVTRIVVEHRDR-FCWFGSEYVEAALVAQGRELVVVDLA  158
             V RIVVEHRDR    +          AQGRELVVVD A
Sbjct  121  SVHRIVVEHRDRVLPGWARSTCRQRFAAQGRELVVVDSA  159


>gi|339290995|gb|AEJ45105.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=195

 Score =  190 bits (483),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 100/184 (55%), Positives = 124/184 (68%), Gaps = 3/184 (1%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGR-LILVNDPAVEESGRGRTLVYARVS  69
            M L+ WA +NG+ +  A+RW + G +PVP ++     ILV +P  E S      +YARVS
Sbjct  1    MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREP--ESSTANAVALYARVS  58

Query  70   SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH  129
            SADQ+ DLDR++AR+  +AT Q L V K V E G  LNGHR K   LL +P    IVVEH
Sbjct  59   SADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPNAHTIVVEH  118

Query  130  RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA  189
            RDR   FG EYVEAAL AQGR ++VV+  EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct  119  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA  178

Query  190  KRAL  193
            KRAL
Sbjct  179  KRAL  182


>gi|339290736|gb|AEJ44846.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=195

 Score =  190 bits (482),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 101/184 (55%), Positives = 123/184 (67%), Gaps = 3/184 (1%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVP-AQRVGRLILVNDPAVEESGRGRTLVYARVS  69
            M L+ WA +NG+ +  A+RW + G +PVP  Q     ILV +P  E S      +YARVS
Sbjct  1    MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREP--ESSTANAVALYARVS  58

Query  70   SADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEH  129
            SADQ+ DLDR++AR+  +AT Q L V K V E G  LNGHR K   LL +P    IVVEH
Sbjct  59   SADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEH  118

Query  130  RDRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGA  189
            RDR   FG EYVEAAL AQGR ++VV+  EV DDLV DM E+LTS CARLYG R+A++ A
Sbjct  119  RDRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRA  178

Query  190  KRAL  193
            KRAL
Sbjct  179  KRAL  182


>gi|158317728|ref|YP_001510236.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158113133|gb|ABW15330.1| Resolvase domain [Frankia sp. EAN1pec]
Length=162

 Score =  188 bits (477),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 112/164 (69%), Positives = 125/164 (77%), Gaps = 2/164 (1%)

Query  38   VPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQRSDLDRRVARVTAWATSQHLSVDK  97
            +PA+RVG LILV +PA   S  G T VYARVSSADQ SDLDR+VARV  WA  ++L V K
Sbjct  1    MPARRVGGLILVEEPA--RSATGMTAVYARVSSADQESDLDRQVARVVTWAAGRNLPVGK  58

Query  98   VVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFCWFGSEYVEAALVAQGRELVVVDL  157
            VV E G AL G RR+F ALLGDP V+ IVVEHRDRF  FG+EYVEAAL A GR L+VVD 
Sbjct  59   VVTEVGSALGGDRREFLALLGDPRVSTIVVEHRDRFARFGAEYVEAALAACGRRLLVVDP  118

Query  158  AEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRALAAAVGDAE  201
            AEVDDDLV D+TEILTSMCARLYG R A N A+RA+ AA G  E
Sbjct  119  AEVDDDLVRDVTEILTSMCARLYGRRGAGNRARRAVEAATGTVE  162


>gi|167969514|ref|ZP_02551791.1| IS1539 resolvase [Mycobacterium tuberculosis H37Ra]
 gi|254551957|ref|ZP_05142404.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|297635503|ref|ZP_06953283.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 25 more sequence titles
 Length=195

 Score =  187 bits (476),  Expect = 6e-46, Method: Compositional matrix adjust.
 Identities = 114/172 (67%), Positives = 133/172 (78%), Gaps = 0/172 (0%)

Query  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70
            MNL VWAE NGVA VIAYRW R G LPVPA+RVGR+ILV++PA +    GRT V AR+SS
Sbjct  1    MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  60

Query  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130
            ADQ+ DLDR+V  VTAWAT++ + V KVV E G AL G RR F  LLGDP V RIV++ R
Sbjct  61   ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  120

Query  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGE  182
            DR   FG E V+A L A GRELVVVD A+VDDD+VGD+TEILTS+CARLYG+
Sbjct  121  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  172



Lambda     K      H
   0.323    0.135    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 223603106580


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40