BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3835 Length=449 Score E Sequences producing significant alignments: (Bits) Value gi|253800883|ref|YP_003033885.1| hypothetical protein TBMG_03881... 892 0.0 gi|15610971|ref|NP_218352.1| hypothetical protein Rv3835 [Mycoba... 892 0.0 gi|289760002|ref|ZP_06519380.1| conserved hypothetical protein [... 889 0.0 gi|224992248|ref|YP_002646938.1| hypothetical protein JTY_3900 [... 889 0.0 gi|294993036|ref|ZP_06798727.1| hypothetical protein Mtub2_00645... 889 0.0 gi|340628804|ref|YP_004747256.1| hypothetical protein MCAN_38541... 881 0.0 gi|306786885|ref|ZP_07425207.1| hypothetical protein TMDG_01791 ... 701 0.0 gi|308232586|ref|ZP_07664119.1| hypothetical protein TMAG_00583 ... 701 0.0 gi|298527310|ref|ZP_07014719.1| conserved hypothetical protein [... 701 0.0 gi|121639753|ref|YP_979977.1| hypothetical protein BCG_3898 [Myc... 698 0.0 gi|167969950|ref|ZP_02552227.1| hypothetical protein MtubH3_1874... 682 0.0 gi|306801480|ref|ZP_07438148.1| hypothetical protein TMHG_02905 ... 631 8e-179 gi|240172633|ref|ZP_04751292.1| hypothetical protein MkanA1_2518... 623 2e-176 gi|183985355|ref|YP_001853646.1| hypothetical protein MMAR_5387 ... 604 9e-171 gi|118620022|ref|YP_908354.1| hypothetical protein MUL_5007 [Myc... 596 3e-168 gi|296166963|ref|ZP_06849379.1| conserved hypothetical protein [... 577 1e-162 gi|15826922|ref|NP_301185.1| hypothetical protein ML0081 [Mycoba... 558 6e-157 gi|342860088|ref|ZP_08716740.1| hypothetical protein MCOL_14455 ... 549 4e-154 gi|41406294|ref|NP_959130.1| hypothetical protein MAP0196c [Myco... 545 8e-153 gi|118465173|ref|YP_879486.1| hypothetical protein MAV_0192 [Myc... 541 9e-152 gi|254822674|ref|ZP_05227675.1| hypothetical protein MintA_22284... 534 1e-149 gi|126437974|ref|YP_001073665.1| hypothetical protein Mjls_5411 ... 479 3e-133 gi|120406602|ref|YP_956431.1| hypothetical protein Mvan_5660 [My... 478 1e-132 gi|108801993|ref|YP_642190.1| hypothetical protein Mmcs_5030 [My... 476 4e-132 gi|315446523|ref|YP_004079402.1| hypothetical protein Mspyr1_503... 468 7e-130 gi|145221741|ref|YP_001132419.1| hypothetical protein Mflv_1149 ... 450 2e-124 gi|118471034|ref|YP_890627.1| hypothetical protein MSMEG_6414 [M... 448 7e-124 gi|169627256|ref|YP_001700905.1| hypothetical protein MAB_0151c ... 435 9e-120 gi|333992784|ref|YP_004525398.1| hypothetical protein JDM601_414... 422 4e-116 gi|312137681|ref|YP_004005017.1| membrane protein [Rhodococcus e... 262 8e-68 gi|333917769|ref|YP_004491350.1| hypothetical protein AS9A_0090 ... 236 6e-60 gi|226363328|ref|YP_002781110.1| hypothetical protein ROP_39180 ... 235 1e-59 gi|343926269|ref|ZP_08765778.1| hypothetical protein GOALK_056_0... 233 7e-59 gi|111021022|ref|YP_703994.1| hypothetical protein RHA1_ro04039 ... 232 9e-59 gi|226303683|ref|YP_002763641.1| hypothetical protein RER_01940 ... 229 8e-58 gi|229494076|ref|ZP_04387843.1| conserved hypothetical protein [... 229 9e-58 gi|262200211|ref|YP_003271419.1| hypothetical protein Gbro_0178 ... 223 4e-56 gi|54022103|ref|YP_116345.1| hypothetical protein nfa1390 [Nocar... 213 6e-53 gi|326384325|ref|ZP_08206006.1| hypothetical protein SCNU_15379 ... 193 4e-47 gi|317507491|ref|ZP_07965216.1| serine/arginine repetitive matri... 184 4e-44 gi|305680280|ref|ZP_07403088.1| conserved hypothetical protein [... 178 2e-42 gi|237784843|ref|YP_002905548.1| hypothetical protein ckrop_0213... 178 2e-42 gi|225022354|ref|ZP_03711546.1| hypothetical protein CORMATOL_02... 176 5e-42 gi|227501876|ref|ZP_03931925.1| secreted protein [Corynebacteriu... 176 9e-42 gi|306837121|ref|ZP_07470058.1| conserved hypothetical protein [... 175 1e-41 gi|311740370|ref|ZP_07714199.1| conserved hypothetical protein [... 172 1e-40 gi|255324116|ref|ZP_05365240.1| conserved hypothetical protein [... 172 1e-40 gi|134096772|ref|YP_001102433.1| putative secreted protein [Sacc... 171 3e-40 gi|262183295|ref|ZP_06042716.1| putative secreted protein [Coryn... 168 2e-39 gi|227834216|ref|YP_002835923.1| putative secreted protein [Cory... 168 2e-39 >gi|253800883|ref|YP_003033885.1| hypothetical protein TBMG_03881 [Mycobacterium tuberculosis KZN 1435] gi|254233323|ref|ZP_04926649.1| hypothetical protein TBCG_03761 [Mycobacterium tuberculosis C] gi|254552951|ref|ZP_05143398.1| hypothetical protein Mtube_21334 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 10 more sequence titles Length=452 Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/449 (100%), Positives = 449/449 (100%), Gaps = 0/449 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 4 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 63 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 64 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 123 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 124 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 183 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 184 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 243 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 244 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 303 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 304 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 363 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ Sbjct 364 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 423 Query 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 PPPPDAGAPPATQSPEATPPGPAEPAPAG Sbjct 424 PPPPDAGAPPATQSPEATPPGPAEPAPAG 452 >gi|15610971|ref|NP_218352.1| hypothetical protein Rv3835 [Mycobacterium tuberculosis H37Rv] gi|15843459|ref|NP_338496.1| hypothetical protein MT3943 [Mycobacterium tuberculosis CDC1551] gi|31795009|ref|NP_857502.1| hypothetical protein Mb3865 [Mycobacterium bovis AF2122/97] 34 more sequence titles Length=449 Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/449 (100%), Positives = 449/449 (100%), Gaps = 0/449 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ Sbjct 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 Query 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 PPPPDAGAPPATQSPEATPPGPAEPAPAG Sbjct 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 >gi|289760002|ref|ZP_06519380.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289715566|gb|EFD79578.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|326905672|gb|EGE52605.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|339296643|gb|AEJ48754.1| hypothetical protein CCDC5079_3565 [Mycobacterium tuberculosis CCDC5079] gi|339300240|gb|AEJ52350.1| hypothetical protein CCDC5180_3513 [Mycobacterium tuberculosis CCDC5180] Length=449 Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/449 (99%), Positives = 448/449 (99%), Gaps = 0/449 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAP KLRTTT Sbjct 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPRKLRTTT 300 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ Sbjct 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 Query 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 PPPPDAGAPPATQSPEATPPGPAEPAPAG Sbjct 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 >gi|224992248|ref|YP_002646938.1| hypothetical protein JTY_3900 [Mycobacterium bovis BCG str. Tokyo 172] gi|224775364|dbj|BAH28170.1| hypothetical protein JTY_3900 [Mycobacterium bovis BCG str. Tokyo 172] Length=449 Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/449 (99%), Positives = 448/449 (99%), Gaps = 0/449 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIAS PVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 61 AIPAVGRAPERLAGYIASYPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ Sbjct 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 Query 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 PPPPDAGAPPATQSPEATPPGPAEPAPAG Sbjct 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 >gi|294993036|ref|ZP_06798727.1| hypothetical protein Mtub2_00645 [Mycobacterium tuberculosis 210] Length=452 Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/449 (99%), Positives = 448/449 (99%), Gaps = 0/449 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 4 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 63 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 64 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 123 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 124 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 183 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 184 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 243 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAP KLRTTT Sbjct 244 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPRKLRTTT 303 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 304 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 363 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ Sbjct 364 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 423 Query 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 PPPPDAGAPPATQSPEATPPGPAEPAPAG Sbjct 424 PPPPDAGAPPATQSPEATPPGPAEPAPAG 452 >gi|340628804|ref|YP_004747256.1| hypothetical protein MCAN_38541 [Mycobacterium canettii CIPT 140010059] gi|340006994|emb|CCC46185.1| putative conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=449 Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/449 (99%), Positives = 445/449 (99%), Gaps = 0/449 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVA+GDCLMWP GTPE AAIVSCADEH Sbjct 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVATGDCLMWPAGTPEFAAIVSCADEH 120 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSR VACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 301 LTLIYPTLTLPSWSAGSREVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ Sbjct 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAPASAAPAETQ 420 Query 421 PPPPDAGAPPATQSPEATPPGPAEPAPAG 449 PPPPDA APPATQSPEATPPGPAEPAPAG Sbjct 421 PPPPDAEAPPATQSPEATPPGPAEPAPAG 449 >gi|306786885|ref|ZP_07425207.1| hypothetical protein TMDG_01791 [Mycobacterium tuberculosis SUMu004] gi|306805687|ref|ZP_07442355.1| hypothetical protein TMGG_01381 [Mycobacterium tuberculosis SUMu007] gi|306974316|ref|ZP_07486977.1| hypothetical protein TMJG_01090 [Mycobacterium tuberculosis SUMu010] gi|308336435|gb|EFP25286.1| hypothetical protein TMDG_01791 [Mycobacterium tuberculosis SUMu004] gi|308347813|gb|EFP36664.1| hypothetical protein TMGG_01381 [Mycobacterium tuberculosis SUMu007] gi|308356387|gb|EFP45238.1| hypothetical protein TMJG_01090 [Mycobacterium tuberculosis SUMu010] Length=588 Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/400 (96%), Positives = 387/400 (97%), Gaps = 7/400 (1%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 Query 361 RLNLPPIPLQLPTPRPAP-------PAQQLPSTPPGTQHL 393 RLNLPPIPLQLPTPRPAP P Q L ++ P +Q L Sbjct 361 RLNLPPIPLQLPTPRPAPRLSSCQVPHQALSTSLPNSQWL 400 >gi|308232586|ref|ZP_07664119.1| hypothetical protein TMAG_00583 [Mycobacterium tuberculosis SUMu001] gi|308369250|ref|ZP_07666697.1| hypothetical protein TMBG_02375 [Mycobacterium tuberculosis SUMu002] gi|308373840|ref|ZP_07667666.1| hypothetical protein TMFG_02070 [Mycobacterium tuberculosis SUMu006] gi|308213531|gb|EFO72930.1| hypothetical protein TMAG_00583 [Mycobacterium tuberculosis SUMu001] gi|308328287|gb|EFP17138.1| hypothetical protein TMBG_02375 [Mycobacterium tuberculosis SUMu002] gi|308344027|gb|EFP32878.1| hypothetical protein TMFG_02070 [Mycobacterium tuberculosis SUMu006] Length=591 Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/400 (96%), Positives = 387/400 (97%), Gaps = 7/400 (1%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 4 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 63 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 64 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 123 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 124 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 183 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 184 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 243 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 244 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 303 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 304 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 363 Query 361 RLNLPPIPLQLPTPRPAP-------PAQQLPSTPPGTQHL 393 RLNLPPIPLQLPTPRPAP P Q L ++ P +Q L Sbjct 364 RLNLPPIPLQLPTPRPAPRLSSCQVPHQALSTSLPNSQWL 403 >gi|298527310|ref|ZP_07014719.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497104|gb|EFI32398.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=452 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/392 (98%), Positives = 383/392 (98%), Gaps = 2/392 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQH 392 RLNLPPIPLQLPTPRPAPP P T+H Sbjct 361 RLNLPPIPLQLPTPRPAPPGSAAAKYP--TRH 390 >gi|121639753|ref|YP_979977.1| hypothetical protein BCG_3898 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121495401|emb|CAL73888.1| Probable conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341603774|emb|CCC66455.1| probable conserved membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=452 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/392 (98%), Positives = 382/392 (98%), Gaps = 2/392 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIAS PVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 61 AIPAVGRAPERLAGYIASYPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE Sbjct 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 Query 361 RLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQH 392 RLNLPPIPLQLPTPRPAPP P T+H Sbjct 361 RLNLPPIPLQLPTPRPAPPGSAAAKYP--TRH 390 >gi|167969950|ref|ZP_02552227.1| hypothetical protein MtubH3_18743 [Mycobacterium tuberculosis H37Ra] Length=339 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/334 (100%), Positives = 334/334 (100%), Gaps = 0/334 (0%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT Sbjct 4 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 63 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH Sbjct 64 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 123 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM Sbjct 124 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 183 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP Sbjct 184 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 243 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT Sbjct 244 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 303 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWA 334 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWA Sbjct 304 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWA 337 >gi|306801480|ref|ZP_07438148.1| hypothetical protein TMHG_02905 [Mycobacterium tuberculosis SUMu008] gi|308351749|gb|EFP40600.1| hypothetical protein TMHG_02905 [Mycobacterium tuberculosis SUMu008] Length=539 Score = 631 bits (1627), Expect = 8e-179, Method: Compositional matrix adjust. Identities = 334/351 (96%), Positives = 338/351 (97%), Gaps = 7/351 (1%) Query 50 LGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPE 109 +GGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPE Sbjct 1 MGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPE 60 Query 110 SAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTK 169 SAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTK Sbjct 61 SAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTK 120 Query 170 FDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGT 229 FDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGT Sbjct 121 FDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGT 180 Query 230 CLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDA 289 CLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDA Sbjct 181 CLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDA 240 Query 290 YLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQ 349 YLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQ Sbjct 241 YLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQ 300 Query 350 PPVPPPDIPEERLNLPPIPLQLPTPRPAP-------PAQQLPSTPPGTQHL 393 PPVPPPDIPEERLNLPPIPLQLPTPRPAP P Q L ++ P +Q L Sbjct 301 PPVPPPDIPEERLNLPPIPLQLPTPRPAPRLSSCQVPHQALSTSLPNSQWL 351 >gi|240172633|ref|ZP_04751292.1| hypothetical protein MkanA1_25185 [Mycobacterium kansasii ATCC 12478] Length=436 Score = 623 bits (1607), Expect = 2e-176, Method: Compositional matrix adjust. Identities = 331/409 (81%), Positives = 357/409 (88%), Gaps = 5/409 (1%) Query 1 MLDAPEQDPVDPGDPASPPHGEA-----EQPLPGPRWPRALRASATRRALLLTALGGLLI 55 MLDAPE+ P + S PHGEA E P G RWPRAL+ASATRRALLLTALG LLI Sbjct 1 MLDAPEKQPPPDSEAESSPHGEAAPAQAEPPGAGFRWPRALQASATRRALLLTALGALLI 60 Query 56 AGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVS 115 AGLVTAIPAV P RLAGYI +NPVPSTGAK NA+FNR GDCL WPD PE+A IVS Sbjct 61 AGLVTAIPAVTTGPGRLAGYIDNNPVPSTGAKNNAAFNRAIGGDCLTWPDAMPEAATIVS 120 Query 116 CADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSK 175 C+D+HRFEVAESIDMRTFPG EYG NAAPPSPARIQQIS+EQCEAAVRRYLGTKFDPNSK Sbjct 121 CSDDHRFEVAESIDMRTFPGSEYGPNAAPPSPARIQQISQEQCEAAVRRYLGTKFDPNSK 180 Query 176 FTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDA 235 FTISMLW GDRAWRQAGERRMLCGLQ PGPNNQQ FKGKVAD+DQSKVWPAGTCL ID+ Sbjct 181 FTISMLWSGDRAWRQAGERRMLCGLQLPGPNNQQALFKGKVADLDQSKVWPAGTCLAIDS 240 Query 236 TTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLK 295 TNQP+DVPVDC APHAMEV+GTVNLAE+FP+ALP+EPEQD +IKD CTRMTDAYLAP+K Sbjct 241 NTNQPVDVPVDCTAPHAMEVTGTVNLAEKFPNALPAEPEQDAYIKDNCTRMTDAYLAPVK 300 Query 296 LRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPP 355 LRTTTLTLIYPTL+L SWSAGSR VACSIGATLGNGGWATLVNSAKG LLINGQPP+PPP Sbjct 301 LRTTTLTLIYPTLSLSSWSAGSREVACSIGATLGNGGWATLVNSAKGPLLINGQPPIPPP 360 Query 356 DIPEERLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTR 404 DIPEERL LPPIP+Q+P P+PA P Q++P TPPG QHLP QQPVVTP+R Sbjct 361 DIPEERLTLPPIPVQVPAPQPAAPVQEIPVTPPGNQHLPNQQPVVTPSR 409 >gi|183985355|ref|YP_001853646.1| hypothetical protein MMAR_5387 [Mycobacterium marinum M] gi|183178681|gb|ACC43791.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=463 Score = 604 bits (1558), Expect = 9e-171, Method: Compositional matrix adjust. Identities = 327/410 (80%), Positives = 354/410 (87%), Gaps = 6/410 (1%) Query 1 MLDAPEQDPVDPGDP------ASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLL 54 MLDAPE++ +P + EAEQP G RWPRAL+ASATRR LLLTALGGLL Sbjct 4 MLDAPEKELAPDSEPDPDAEADAETAAEAEQPSAGFRWPRALQASATRRGLLLTALGGLL 63 Query 55 IAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIV 114 IAGL+TAIP V P RLAGYI +NPVPSTG K NA+FNR +GDCLMWP+GTPE+A IV Sbjct 64 IAGLITAIPDVATGPGRLAGYIDNNPVPSTGTKSNAAFNRATTGDCLMWPEGTPEAATIV 123 Query 115 SCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNS 174 C DEHRFEVAESIDMRTFPG EYG +AAPPSPARIQQIS+EQC+AAVRRYLG KFDPNS Sbjct 124 DCGDEHRFEVAESIDMRTFPGSEYGPDAAPPSPARIQQISQEQCQAAVRRYLGAKFDPNS 183 Query 175 KFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGID 234 KFT SMLW GDRAWRQAGERRMLCGLQ PGPNNQQ AFKGKVADI+QSKVWPAGTCLGID Sbjct 184 KFTTSMLWSGDRAWRQAGERRMLCGLQLPGPNNQQTAFKGKVADINQSKVWPAGTCLGID 243 Query 235 ATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPL 294 +TTNQPID+PVDCAAPHAMEV+GTVNLAE+FPDALP EPEQDG+IKD CTR+TDAYLAP+ Sbjct 244 STTNQPIDIPVDCAAPHAMEVTGTVNLAEKFPDALPPEPEQDGYIKDTCTRLTDAYLAPI 303 Query 295 KLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPP 354 KLRTTTLTLIYPTL+LPSWSAGSR VACSIGATLGNGGWATLVNSAKG LLINGQPPVPP Sbjct 304 KLRTTTLTLIYPTLSLPSWSAGSREVACSIGATLGNGGWATLVNSAKGELLINGQPPVPP 363 Query 355 PDIPEERLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTR 404 PDIPEERL LPPIPLQ+P PAP +Q + PP QHLP QQPVVTP+R Sbjct 364 PDIPEERLTLPPIPLQVPPAAPAPAPRQTQTAPPSNQHLPNQQPVVTPSR 413 >gi|118620022|ref|YP_908354.1| hypothetical protein MUL_5007 [Mycobacterium ulcerans Agy99] gi|118572132|gb|ABL06883.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=458 Score = 596 bits (1536), Expect = 3e-168, Method: Compositional matrix adjust. Identities = 322/410 (79%), Positives = 349/410 (86%), Gaps = 8/410 (1%) Query 1 MLDAPEQDPVDPGDP------ASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLL 54 MLDAPE++ +P + EAEQP G RWPRAL+ASATRR LLLTALGGLL Sbjct 1 MLDAPEKELAPDSEPDPDAEADAETAAEAEQPSAGFRWPRALQASATRRGLLLTALGGLL 60 Query 55 IAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIV 114 IAGL+TAIP V P RL GYI +NPVPSTG K NA+FNR +GDCLMWP+GTPE+A IV Sbjct 61 IAGLITAIPDVATGPGRLGGYIDNNPVPSTGTKSNAAFNRATTGDCLMWPEGTPEAATIV 120 Query 115 SCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNS 174 C DEHRFEVAESIDMRTFPG EYG +A+PPSPARIQQIS+EQC AAVRRYLG +FDPNS Sbjct 121 DCGDEHRFEVAESIDMRTFPGSEYGPDASPPSPARIQQISQEQCRAAVRRYLGAEFDPNS 180 Query 175 KFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGID 234 KFT SMLW GDRAWRQAGERRMLCGLQ PGPNNQQ AFKGKVADI+QSKVWPAGTCLGID Sbjct 181 KFTTSMLWSGDRAWRQAGERRMLCGLQLPGPNNQQTAFKGKVADINQSKVWPAGTCLGID 240 Query 235 ATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPL 294 +TTNQPID+PVDCAAPHAMEV+GTVNLAE+FPDALP EPEQDG+IKD CTRMT AYL P+ Sbjct 241 STTNQPIDIPVDCAAPHAMEVTGTVNLAEKFPDALPPEPEQDGYIKDTCTRMTGAYLGPI 300 Query 295 KLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPP 354 KLRTTTLTLIYPTL+LPSWSAGSR VACSIGATL NGGWATLVNSAKG LLINGQPPVPP Sbjct 301 KLRTTTLTLIYPTLSLPSWSAGSREVACSIGATLSNGGWATLVNSAKGELLINGQPPVPP 360 Query 355 PDIPEERLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTR 404 PDIPEERL LPPIPLQ+P PAP +Q + PP QHLP QQPVVTP+R Sbjct 361 PDIPEERLTLPPIPLQVPPAAPAP--RQTQTAPPSNQHLPNQQPVVTPSR 408 >gi|296166963|ref|ZP_06849379.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897702|gb|EFG77292.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=426 Score = 577 bits (1488), Expect = 1e-162, Method: Compositional matrix adjust. Identities = 309/409 (76%), Positives = 347/409 (85%), Gaps = 3/409 (0%) Query 1 MLDAPEQD-PVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLV 59 M APE D P P D + P E EQP G RWPR+L+A ATRRALLLTALGGLLIAGLV Sbjct 4 MSQAPETDHPEAPEDDS--PATEPEQPRAGFRWPRSLQAQATRRALLLTALGGLLIAGLV 61 Query 60 TAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADE 119 TA+P G P RL+GY+ NPVP+TG+K +A+FN+ A+GDCLMWPD TPESA IV+CA++ Sbjct 62 TALPIDGTGPGRLSGYLDGNPVPTTGSKSDAAFNKAAAGDCLMWPDTTPESAKIVNCAED 121 Query 120 HRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTIS 179 H+FEVAES+DMRTFPG EYG AAPPSPARIQQI++EQCE+AVR YLG KFDPNSKFT+S Sbjct 122 HKFEVAESVDMRTFPGSEYGPTAAPPSPARIQQITQEQCESAVRNYLGAKFDPNSKFTVS 181 Query 180 MLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQ 239 +LWPGDRAWRQ+GERRMLCGLQ PG NNQQ FKGKVADIDQSKVWPAGTCLGID+TTNQ Sbjct 182 LLWPGDRAWRQSGERRMLCGLQLPGINNQQQPFKGKVADIDQSKVWPAGTCLGIDSTTNQ 241 Query 240 PIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTT 299 PID PV+C+APHAMEV+GTVNLAE+FP ALP+EP+QDG+IKD CT+MTDAYLAP+KLRTT Sbjct 242 PIDAPVECSAPHAMEVTGTVNLAEKFPGALPAEPDQDGYIKDLCTKMTDAYLAPVKLRTT 301 Query 300 TLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPE 359 TLTLIYPT+ L SW+AGSR VACSIGATLGNGGWATLVNSAKG LLINGQPPVPPPDIPE Sbjct 302 TLTLIYPTVPLASWTAGSREVACSIGATLGNGGWATLVNSAKGQLLINGQPPVPPPDIPE 361 Query 360 ERLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPES 408 ERL +PPIPLQ+P P A P PP QHLP QQPVVTP + P S Sbjct 362 ERLTMPPIPLQVPAQAPPSQASAPPEIPPNNQHLPGQQPVVTPPQAPAS 410 >gi|15826922|ref|NP_301185.1| hypothetical protein ML0081 [Mycobacterium leprae TN] gi|221229400|ref|YP_002502816.1| hypothetical protein MLBr_00081 [Mycobacterium leprae Br4923] gi|13092469|emb|CAC29589.1| putative membrane protein [Mycobacterium leprae] gi|219932507|emb|CAR70174.1| putative membrane protein [Mycobacterium leprae Br4923] Length=450 Score = 558 bits (1439), Expect = 6e-157, Method: Compositional matrix adjust. Identities = 309/425 (73%), Positives = 342/425 (81%), Gaps = 11/425 (2%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 MLDAPE++P D GE EQP +WP L+A ATRR LLLTALGGLLI GLVT Sbjct 1 MLDAPEEEPALADDLT----GEDEQPPVEFQWPSTLQARATRRGLLLTALGGLLIGGLVT 56 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 AIP VG LA YI SNPVPSTGAK N +FNR +GDCLMWPD TP +A IV+CAD+H Sbjct 57 AIPTVGTGSGLLATYIDSNPVPSTGAKSNVAFNRATNGDCLMWPDSTPHTAVIVNCADDH 116 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAESIDMRTFPG EYG NAAPPSPARIQQISEEQCE AVRRYLGTKFDPNSK+TISM Sbjct 117 RFEVAESIDMRTFPGSEYGPNAAPPSPARIQQISEEQCETAVRRYLGTKFDPNSKYTISM 176 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LW GDRAWRQ+GERRMLCGLQ PG NNQQ+AFKGKVA+IDQSKVWPAGTCL ID TTNQP Sbjct 177 LWSGDRAWRQSGERRMLCGLQLPGVNNQQVAFKGKVANIDQSKVWPAGTCLSIDLTTNQP 236 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 ID+PVDC APHAMEV+GTVNLA++FP+ALP+ EQD FIKDACTR+TD YLA ++LRTTT Sbjct 237 IDIPVDCVAPHAMEVTGTVNLADKFPNALPAASEQDTFIKDACTRLTDIYLAAIELRTTT 296 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPTL+L SW+AGSR VACSIGAT+GNGGWATLVNSAKG LLIN QPP PPPDIPEE Sbjct 297 LTLIYPTLSLSSWAAGSRKVACSIGATMGNGGWATLVNSAKGPLLINNQPPTPPPDIPEE 356 Query 361 RLNLPPIP---LQLPTPRPAPPAQQLPSTPPGTQHLPAQQPVVTPTRPPESHAP-ASAAP 416 RL +PPIP LQ+P + P + PPG Q QQP+VT + P S AP AS +P Sbjct 357 RLGMPPIPLHHLQVPNSQSNVPVNPI---PPGNQQHRKQQPIVTVPQSPASTAPAASVSP 413 Query 417 AETQP 421 A+ P Sbjct 414 AKHLP 418 >gi|342860088|ref|ZP_08716740.1| hypothetical protein MCOL_14455 [Mycobacterium colombiense CECT 3035] gi|342132466|gb|EGT85695.1| hypothetical protein MCOL_14455 [Mycobacterium colombiense CECT 3035] Length=464 Score = 549 bits (1414), Expect = 4e-154, Method: Compositional matrix adjust. Identities = 279/366 (77%), Positives = 314/366 (86%), Gaps = 5/366 (1%) Query 32 WPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINAS 91 WPR+L+A ATRRALLLTALGGLLIAGLVTAIP G RL + S+PV STG K +A+ Sbjct 38 WPRSLQARATRRALLLTALGGLLIAGLVTAIPVGGAGSGRL---LDSSPVRSTGTKSDAA 94 Query 92 FNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQ 151 FNR + G+CLMWPD TPES+ IV+C D+H+FEVAESIDMRTFPG EYG NAAPP+PARIQ Sbjct 95 FNRASPGECLMWPDTTPESSKIVNCGDDHKFEVAESIDMRTFPGSEYGPNAAPPTPARIQ 154 Query 152 QISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLA 211 QI++EQCEAAVR YLG KFDPNS+FT+S+LWPGDRAWRQ+G+RRMLCGLQ PG NNQQ A Sbjct 155 QITQEQCEAAVRNYLGAKFDPNSRFTVSLLWPGDRAWRQSGDRRMLCGLQLPGMNNQQQA 214 Query 212 FKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPS 271 FKGKVAD+DQSKVWPAGTCLGID+ TNQP D PVDCAAPHAMEV+GTVNLAE+FP ALP+ Sbjct 215 FKGKVADVDQSKVWPAGTCLGIDSATNQPTDAPVDCAAPHAMEVTGTVNLAEKFPGALPA 274 Query 272 EPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNG 331 EP+QDGFIKD+CT+MTDAYLAP+KLRTTTLTLIYPT+ L SW+AGSR VACSIGATLGNG Sbjct 275 EPDQDGFIKDSCTKMTDAYLAPVKLRTTTLTLIYPTVPLASWAAGSREVACSIGATLGNG 334 Query 332 GWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLP--TPRPAPPAQQLPSTPPG 389 GWATL+NSAKG LLINGQPPV PPDIPEERL +PPIPLQ P P + +P PP Sbjct 335 GWATLLNSAKGQLLINGQPPVAPPDIPEERLTMPPIPLQAPAQQPSSQSGSGSVPEIPPN 394 Query 390 TQHLPA 395 QHLP Sbjct 395 NQHLPG 400 >gi|41406294|ref|NP_959130.1| hypothetical protein MAP0196c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394642|gb|AAS02513.1| hypothetical protein MAP_0196c [Mycobacterium avium subsp. paratuberculosis K-10] Length=450 Score = 545 bits (1403), Expect = 8e-153, Method: Compositional matrix adjust. Identities = 294/403 (73%), Positives = 333/403 (83%), Gaps = 9/403 (2%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 M APE+D + G+ + A L WPR+L+A ATRRALLLTALGGLLIAGLVT Sbjct 1 MSQAPEKDLPEAGEAPAVETTAASAFL----WPRSLQARATRRALLLTALGGLLIAGLVT 56 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 A+P G RL + ++PV STGAK +A+FNR ASG+CLMWPD TPESA IV+C D+H Sbjct 57 ALPVGGTGSGRL---LDASPVRSTGAKSDAAFNRAASGECLMWPDTTPESAKIVNCGDDH 113 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 +FEVAESIDMRTFPG EYG NAAPP+PARIQQI++EQCEAAVR YLG KFDPNSKFT+S+ Sbjct 114 KFEVAESIDMRTFPGSEYGPNAAPPTPARIQQITQEQCEAAVRNYLGPKFDPNSKFTVSL 173 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 LWPGDRAWRQ G+RRMLCGLQ PG NNQQ FKGKVAD+DQSK+WPAGTCLGID+ TNQP Sbjct 174 LWPGDRAWRQGGDRRMLCGLQLPGANNQQQVFKGKVADVDQSKIWPAGTCLGIDSATNQP 233 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 DVPVDCAAPHAMEV+GTVNLAE+FP ALP+EP+QD FIKD+CT+MTDAYLAP+KLRTTT Sbjct 234 TDVPVDCAAPHAMEVTGTVNLAEKFPGALPAEPDQDAFIKDSCTKMTDAYLAPVKLRTTT 293 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIYPT+ L SW+AGSR VACSIGATLGNGGWATL+NSAKG LLINGQPPVPPPDIPEE Sbjct 294 LTLIYPTVPLASWTAGSREVACSIGATLGNGGWATLLNSAKGQLLINGQPPVPPPDIPEE 353 Query 361 RLNLPPIPLQLPTPRPAPPAQQ--LPSTPPGTQHLPAQQPVVT 401 RL++PPIPLQ P P+ + P P QHLP QQPVVT Sbjct 354 RLSMPPIPLQAPAQSPSTQSGSAAAPEMPRNNQHLPGQQPVVT 396 >gi|118465173|ref|YP_879486.1| hypothetical protein MAV_0192 [Mycobacterium avium 104] gi|118166460|gb|ABK67357.1| conserved hypothetical protein [Mycobacterium avium 104] Length=448 Score = 541 bits (1394), Expect = 9e-152, Method: Compositional matrix adjust. Identities = 295/404 (74%), Positives = 333/404 (83%), Gaps = 10/404 (2%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 M APE+D + G+ + A L WPR+L+A ATRRALLLTALGGLLIAGLVT Sbjct 4 MSQAPEKDLPEAGEAPAVETTAASAFL----WPRSLQARATRRALLLTALGGLLIAGLVT 59 Query 61 AIP-AVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADE 119 AIP G RL + ++PV STGAK +A+FNR ASG+CLMWPD TPESA IV+C D+ Sbjct 60 AIPVGGGTGSGRL---LDASPVRSTGAKSDAAFNRAASGECLMWPDTTPESAKIVNCGDD 116 Query 120 HRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTIS 179 H+FEVAESIDMRTFPG EYG NAAPP+PARIQQI++EQCEAAVR YLG KFDPNSKFT+S Sbjct 117 HKFEVAESIDMRTFPGSEYGPNAAPPTPARIQQITQEQCEAAVRNYLGPKFDPNSKFTVS 176 Query 180 MLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQ 239 +LWPGDRAWRQ G+RRMLCGLQ PG NNQQ FKGKVAD+DQSK+WP GTCLGID+ TNQ Sbjct 177 LLWPGDRAWRQGGDRRMLCGLQLPGANNQQQVFKGKVADVDQSKIWPTGTCLGIDSATNQ 236 Query 240 PIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTT 299 P DVPVDCAAPHAMEV+GTVNLAE+FP ALP+EP+QD FIKD+CT+MTDAYLAP+KLRTT Sbjct 237 PTDVPVDCAAPHAMEVTGTVNLAEKFPGALPAEPDQDAFIKDSCTKMTDAYLAPVKLRTT 296 Query 300 TLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPE 359 TLTLIYPT+ L SW+AGSR VACSIGATLGNGGWATL+NSAKG LLINGQPPVPPPDIPE Sbjct 297 TLTLIYPTVPLASWTAGSREVACSIGATLGNGGWATLLNSAKGQLLINGQPPVPPPDIPE 356 Query 360 ERLNLPPIPLQLPTPRPAPPAQQL--PSTPPGTQHLPAQQPVVT 401 ERL++PPIPLQ P P+ + P PP QHLP QQPVVT Sbjct 357 ERLSMPPIPLQAPAQSPSTQSGSAAAPEMPPNNQHLPGQQPVVT 400 >gi|254822674|ref|ZP_05227675.1| hypothetical protein MintA_22284 [Mycobacterium intracellulare ATCC 13950] Length=456 Score = 534 bits (1376), Expect = 1e-149, Method: Compositional matrix adjust. Identities = 281/363 (78%), Positives = 314/363 (87%), Gaps = 4/363 (1%) Query 32 WPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINAS 91 WPR+L+A ATRRALLLTALGGLLIAGLVTAIP V RL + S+PV STGAK +A+ Sbjct 38 WPRSLQARATRRALLLTALGGLLIAGLVTAIP-VSTESGRL---LDSSPVRSTGAKSDAA 93 Query 92 FNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQ 151 NR + G+CLMWPD TPESA IV+C D+H+FEVAESIDMRTFPG EYG NAAPP+PARIQ Sbjct 94 LNRASRGECLMWPDATPESAKIVNCGDDHKFEVAESIDMRTFPGSEYGPNAAPPTPARIQ 153 Query 152 QISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLA 211 QI++EQCEA+VR YLG KFDPNSKFT+S+LWPGDRAWRQ+G+RRMLCGLQ P NNQQ A Sbjct 154 QITQEQCEASVRNYLGLKFDPNSKFTVSLLWPGDRAWRQSGDRRMLCGLQLPATNNQQQA 213 Query 212 FKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPS 271 FKGKVAD+DQSKVWPAGTCLGID TNQP DVPVDC APHAMEV+GTVNLAERFPDALP+ Sbjct 214 FKGKVADVDQSKVWPAGTCLGIDPATNQPTDVPVDCTAPHAMEVTGTVNLAERFPDALPA 273 Query 272 EPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNG 331 EP+QD FIKD+CT+MTDAYLAP+KLRTTTLTLIYPT+ L SW+AGSR VACSIGATLGNG Sbjct 274 EPDQDSFIKDSCTKMTDAYLAPVKLRTTTLTLIYPTVPLASWTAGSREVACSIGATLGNG 333 Query 332 GWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLPTPRPAPPAQQLPSTPPGTQ 391 GWATL+NSAKG LLINGQPPVPPPDIPEERL +PPIPLQ+P P+ + P PP Q Sbjct 334 GWATLLNSAKGQLLINGQPPVPPPDIPEERLTMPPIPLQVPAQAPSNQSTTAPEMPPNNQ 393 Query 392 HLP 394 HLP Sbjct 394 HLP 396 >gi|126437974|ref|YP_001073665.1| hypothetical protein Mjls_5411 [Mycobacterium sp. JLS] gi|126237774|gb|ABO01175.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=462 Score = 479 bits (1234), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 263/369 (72%), Positives = 296/369 (81%), Gaps = 16/369 (4%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 ML+APE+D P G+A P W +L+A+ TRRALLLTALGGLLIAG VT Sbjct 1 MLEAPERDR---------PAGDARDKAP---WWHSLQATPTRRALLLTALGGLLIAGFVT 48 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 A+P E G S + G + N +FN +GDCL WP+ P+ A IV C DEH Sbjct 49 ALPR----SEGTNGPGLSASAITLGPRGNDTFNHAKAGDCLNWPERNPDGAQIVDCKDEH 104 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAES+DMRTFPG EYG +A PPSPARIQQIS+EQC+AAVRRYLG +FDPNS+FTISM Sbjct 105 RFEVAESVDMRTFPGSEYGPDAEPPSPARIQQISQEQCQAAVRRYLGPRFDPNSRFTISM 164 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 +W GD+AWRQAGERRMLCGLQ PGPNNQQLAF GKVA+IDQSKVWPAGTCLGID TNQP Sbjct 165 MWSGDKAWRQAGERRMLCGLQLPGPNNQQLAFTGKVAEIDQSKVWPAGTCLGIDPATNQP 224 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 D+PVDCAAPHAMEV+G VNL E+FP ALP EPEQD FIKDACTRMTDAYLAP+KLR TT Sbjct 225 TDIPVDCAAPHAMEVTGAVNLKEKFPGALPPEPEQDTFIKDACTRMTDAYLAPIKLRNTT 284 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIY T++LPSW+AGS V+CSIGATLGNGGW+TL+NSAKG L INGQPPVPPPDIPEE Sbjct 285 LTLIYSTISLPSWAAGSHQVSCSIGATLGNGGWSTLLNSAKGPLQINGQPPVPPPDIPEE 344 Query 361 RLNLPPIPL 369 RLNLPPIP+ Sbjct 345 RLNLPPIPM 353 >gi|120406602|ref|YP_956431.1| hypothetical protein Mvan_5660 [Mycobacterium vanbaalenii PYR-1] gi|119959420|gb|ABM16425.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=460 Score = 478 bits (1230), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 252/344 (74%), Positives = 293/344 (86%), Gaps = 7/344 (2%) Query 26 PLPGPRWPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTG 85 P PGP W R+L+A++TRRALLLTALGGLLIAG++TA+P G + +N + S G Sbjct 10 PAPGPWW-RSLQAASTRRALLLTALGGLLIAGVITALPKADPT-----GGLTANSI-SLG 62 Query 86 AKINASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPP 145 + N +F+ SGDCL WPD TP++A +V CA EHRFEVAES+DMRTFPG EYG +AAPP Sbjct 63 PRGNDTFDHAKSGDCLNWPDRTPDAAEVVDCAAEHRFEVAESVDMRTFPGSEYGPDAAPP 122 Query 146 SPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGP 205 S ARIQQIS+EQC AAV+RYLG +FDPNS+FTISMLW GD+AWRQ+GERRMLCGLQ PGP Sbjct 123 SAARIQQISQEQCSAAVKRYLGARFDPNSRFTISMLWSGDKAWRQSGERRMLCGLQLPGP 182 Query 206 NNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERF 265 NNQQLAF+GKVA+IDQSKVWPAGTCLGID TNQP D+P+DCAAPHAMEV+G VNLA +F Sbjct 183 NNQQLAFQGKVAEIDQSKVWPAGTCLGIDPATNQPTDIPIDCAAPHAMEVTGAVNLAAKF 242 Query 266 PDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIG 325 PD LP+E EQD FIKD CT+MTDAYLAP+KLR TTLTLIY T++LPSW+AGSR V+CSIG Sbjct 243 PDVLPAEAEQDTFIKDECTKMTDAYLAPIKLRETTLTLIYSTVSLPSWAAGSRQVSCSIG 302 Query 326 ATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPL 369 ATLGNGGW+TL+NSAKG L+INGQPPVPPPDIPEERL LP IP+ Sbjct 303 ATLGNGGWSTLLNSAKGPLMINGQPPVPPPDIPEERLTLPAIPV 346 >gi|108801993|ref|YP_642190.1| hypothetical protein Mmcs_5030 [Mycobacterium sp. MCS] gi|119871145|ref|YP_941097.1| hypothetical protein Mkms_5118 [Mycobacterium sp. KMS] gi|108772412|gb|ABG11134.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697234|gb|ABL94307.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=465 Score = 476 bits (1224), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 262/369 (72%), Positives = 295/369 (80%), Gaps = 16/369 (4%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT 60 ML+APE+D G+A P W +L+A+ TRRALLLTALGGLLIAG VT Sbjct 4 MLEAPERDRPA---------GDARDKAP---WWHSLQATPTRRALLLTALGGLLIAGFVT 51 Query 61 AIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH 120 A+P E G S + G + N +FN +GDCL WP+ P+ A IV C DEH Sbjct 52 ALP----RSEGTNGPGLSASAITLGPRGNDTFNHAKAGDCLNWPERNPDGAQIVDCKDEH 107 Query 121 RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM 180 RFEVAES+DMRTFPG EYG +A PPSPARIQQIS+EQC+AAVRRYLG +FDPNS+FTISM Sbjct 108 RFEVAESVDMRTFPGSEYGPDAEPPSPARIQQISQEQCQAAVRRYLGPRFDPNSRFTISM 167 Query 181 LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP 240 +W GD+AWRQAGERRMLCGLQ PGPNNQQLAF GKVA+IDQSKVWPAGTCLGID TNQP Sbjct 168 MWSGDKAWRQAGERRMLCGLQLPGPNNQQLAFTGKVAEIDQSKVWPAGTCLGIDPATNQP 227 Query 241 IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT 300 D+PVDCAAPHAMEV+G VNL E+FP ALP EPEQD FIKDACTRMTDAYLAP+KLR TT Sbjct 228 TDIPVDCAAPHAMEVTGAVNLKEKFPGALPPEPEQDTFIKDACTRMTDAYLAPIKLRNTT 287 Query 301 LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE 360 LTLIY T++LPSW+AGS V+CSIGATLGNGGW+TL+NSAKG L INGQPPVPPPDIPEE Sbjct 288 LTLIYSTISLPSWAAGSHQVSCSIGATLGNGGWSTLLNSAKGPLQINGQPPVPPPDIPEE 347 Query 361 RLNLPPIPL 369 RLNLPPIP+ Sbjct 348 RLNLPPIPM 356 >gi|315446523|ref|YP_004079402.1| hypothetical protein Mspyr1_50380 [Mycobacterium sp. Spyr1] gi|315264826|gb|ADU01568.1| hypothetical protein Mspyr1_50380 [Mycobacterium sp. Spyr1] Length=452 Score = 468 bits (1205), Expect = 7e-130, Method: Compositional matrix adjust. Identities = 245/338 (73%), Positives = 287/338 (85%), Gaps = 6/338 (1%) Query 32 WPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINAS 91 W R+L A++TRRALLLTALGGLLIAG++TA+P G + +N + S G + N + Sbjct 11 WWRSLHAASTRRALLLTALGGLLIAGVITALPDTDPT-----GGLTANSI-SLGPRGNDT 64 Query 92 FNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQ 151 F+ SGDCL WPD TP++A IV CA EHRFEVAES+DM TFPG EYG +AAPPS ARIQ Sbjct 65 FDHAKSGDCLTWPDRTPDAAEIVDCAGEHRFEVAESVDMGTFPGSEYGPDAAPPSAARIQ 124 Query 152 QISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLA 211 QIS+EQC AAV+RYLG +FDPNS+F++SMLW GD+AWRQ+GERRMLCGLQ PGPNNQQLA Sbjct 125 QISQEQCSAAVKRYLGARFDPNSRFSVSMLWSGDKAWRQSGERRMLCGLQLPGPNNQQLA 184 Query 212 FKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPS 271 F G+VAD+DQSKVWP GTCLGID TNQP D+PVDCAAPHAMEV+G VNLA +FP ALP Sbjct 185 FTGRVADVDQSKVWPVGTCLGIDPATNQPTDIPVDCAAPHAMEVTGAVNLAAKFPAALPP 244 Query 272 EPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNG 331 EPEQD FIKD CT+MTDAYLAP++LR TTLTL+Y T++LPSW+AGSR V+CSIGATLGNG Sbjct 245 EPEQDTFIKDECTKMTDAYLAPIELRETTLTLVYSTVSLPSWAAGSRQVSCSIGATLGNG 304 Query 332 GWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPL 369 GW+TL+NSAKG L+INGQPPVPPPDIPEERL+LPPIP+ Sbjct 305 GWSTLLNSAKGPLMINGQPPVPPPDIPEERLSLPPIPV 342 >gi|145221741|ref|YP_001132419.1| hypothetical protein Mflv_1149 [Mycobacterium gilvum PYR-GCK] gi|145214227|gb|ABP43631.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=416 Score = 450 bits (1158), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 223/312 (72%), Positives = 262/312 (84%), Gaps = 6/312 (1%) Query 58 LVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCA 117 ++TA+P G + +N + S G + N +F+ GDCL WPD TP++A IV CA Sbjct 1 MITALPDTDPT-----GGLTANSI-SLGPRGNDTFDHAKRGDCLTWPDRTPDAAEIVDCA 54 Query 118 DEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFT 177 EHRFEVAES+DM TFPG EYG +AAPPS ARIQQIS+EQC AAV+RYLG +FDPNS+F+ Sbjct 55 GEHRFEVAESVDMGTFPGSEYGPDAAPPSAARIQQISQEQCSAAVKRYLGARFDPNSRFS 114 Query 178 ISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATT 237 +SMLW GD+AWRQ+GERRMLCGLQ PGPNNQQLAF G+VAD+DQSKVWP GTCLGID T Sbjct 115 VSMLWSGDKAWRQSGERRMLCGLQLPGPNNQQLAFTGRVADVDQSKVWPVGTCLGIDPAT 174 Query 238 NQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLR 297 NQP D+PVDCAAPHAMEV+G VNLA +FP ALP EPEQD FIKD CT+MTDAYLAP++LR Sbjct 175 NQPTDIPVDCAAPHAMEVTGAVNLAAKFPAALPPEPEQDTFIKDECTKMTDAYLAPIELR 234 Query 298 TTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDI 357 TTLTL+Y T++LPSW+AGSR V+CSIGATLGNGGW+TL+NSAKG L+INGQPPVPPPDI Sbjct 235 ETTLTLVYSTVSLPSWAAGSRQVSCSIGATLGNGGWSTLLNSAKGPLMINGQPPVPPPDI 294 Query 358 PEERLNLPPIPL 369 PEERL+LPPIP+ Sbjct 295 PEERLSLPPIPV 306 Score = 431 bits (1109), Expect = 9e-119, Method: Compositional matrix adjust. Identities = 229/359 (64%), Positives = 269/359 (75%), Gaps = 29/359 (8%) Query 74 GYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTF 133 G + +N + S G + N +F+ GDCL WPD TP++A IV CA EHRFEVAES+DM TF Sbjct 12 GGLTANSI-SLGPRGNDTFDHAKRGDCLTWPDRTPDAAEIVDCAGEHRFEVAESVDMGTF 70 Query 134 PGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGE 193 PG EYG +AAPPS ARIQQIS+EQC AAV+RYLG +FDPNS+F++SMLW GD+AWRQ+GE Sbjct 71 PGSEYGPDAAPPSAARIQQISQEQCSAAVKRYLGARFDPNSRFSVSMLWSGDKAWRQSGE 130 Query 194 RRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAM 253 RRMLCGLQ PGPNNQQLAF G+VAD+DQSKVWP GTCLGID TNQP D+PVDCAAPHAM Sbjct 131 RRMLCGLQLPGPNNQQLAFTGRVADVDQSKVWPVGTCLGIDPATNQPTDIPVDCAAPHAM 190 Query 254 EVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSW 313 EV+G VNLA +FP ALP EPEQD FIKD CT+MTDAYLAP++LR TTLTL+Y T++LPSW Sbjct 191 EVTGAVNLAAKFPAALPPEPEQDTFIKDECTKMTDAYLAPIELRETTLTLVYSTVSLPSW 250 Query 314 SAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPL---- 369 +AGSR V+CSIGATLGNGGW+TL+NSAKG L+INGQPPVPPPDIPEERL+LPPIP+ Sbjct 251 AAGSRQVSCSIGATLGNGGWSTLLNSAKGPLMINGQPPVPPPDIPEERLSLPPIPVPDSS 310 Query 370 ---------------------QLPTPRPAPPAQQLPSTPPGTQH---LPAQQPVVTPTR 404 + + +Q T G Q P +QP V P Sbjct 311 SGSSSSSSSSGSSSSSGSSDSSGSSDSSSGSSQSEDQTVHGPQAPAPAPTEQPPVNPAP 369 >gi|118471034|ref|YP_890627.1| hypothetical protein MSMEG_6414 [Mycobacterium smegmatis str. MC2 155] gi|118172321|gb|ABK73217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=483 Score = 448 bits (1153), Expect = 7e-124, Method: Compositional matrix adjust. Identities = 235/340 (70%), Positives = 271/340 (80%), Gaps = 7/340 (2%) Query 31 RWPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERL-AGYIASNPVPSTGAKIN 89 R+ +L A++TRRALLLTALGGLLIAGL+TA+P A L AG IA P + N Sbjct 23 RFWISLHAASTRRALLLTALGGLLIAGLITALPRSEGANNTLSAGAIALGP------RGN 76 Query 90 ASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPAR 149 +FN V GDCL WP P++A IV C + HRFEVA +IDMRTFPG EYG +A PPS R Sbjct 77 ETFNHVKDGDCLNWPGRNPDAARIVDCGENHRFEVAAAIDMRTFPGSEYGPSAPPPSMDR 136 Query 150 IQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQ 209 I+QIS+EQC A++ YLG KFDPN KFTI +LW G++AW+Q+GERRMLCGLQ GP + Q Sbjct 137 IKQISQEQCTPALKSYLGPKFDPNGKFTIGLLWSGEKAWKQSGERRMLCGLQLLGPGDTQ 196 Query 210 LAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDAL 269 L F GKVADIDQSKVWPAGTCLGID TNQP DVPVDCAAPHAMEV+G VNLAE+FP L Sbjct 197 LEFTGKVADIDQSKVWPAGTCLGIDPATNQPTDVPVDCAAPHAMEVTGAVNLAEKFPGPL 256 Query 270 PSEPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLG 329 P+E +QD FIKDACT+ TDAYLAP++LR+TTL L Y T++LPSWSAGSR V+CSIGATLG Sbjct 257 PAEDDQDEFIKDACTKQTDAYLAPVQLRSTTLALSYSTISLPSWSAGSRQVSCSIGATLG 316 Query 330 NGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPL 369 NGGW+TLVN+AKG LLINGQPPV PPDIP ERLNL PIPL Sbjct 317 NGGWSTLVNTAKGPLLINGQPPVAPPDIPAERLNLDPIPL 356 >gi|169627256|ref|YP_001700905.1| hypothetical protein MAB_0151c [Mycobacterium abscessus ATCC 19977] gi|169239223|emb|CAM60251.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=557 Score = 435 bits (1118), Expect = 9e-120, Method: Compositional matrix adjust. Identities = 220/376 (59%), Positives = 279/376 (75%), Gaps = 9/376 (2%) Query 1 MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRW----PRALRASATRRALLLTALGGLLIA 56 +L+ P+ D D P + + Q P+W L+ +T RALLL GGL IA Sbjct 72 ILEYPDTD--DSAVPVAEEPQQGAQESAKPQWWAGLKEGLKERSTHRALLLVTFGGLFIA 129 Query 57 GLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPD-GTPESAAIVS 115 G+ A+P + +RL I SNPVPSTGA N++FN +G+CL WP + IV Sbjct 130 GVTQALPDGWTSADRLVNKIDSNPVPSTGAPGNSTFNSAKAGECLNWPAPASTNDVNIVD 189 Query 116 CADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSK 175 CA++HRFE+AESID+RTFPG EYG N+ PP+ RIQ+IS+EQC+ A+ RYLG ++DPNS+ Sbjct 190 CANDHRFEIAESIDLRTFPGTEYGPNSKPPTVGRIQEISQEQCQVAINRYLGDRYDPNSR 249 Query 176 FTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDA 235 FT+ MLWPG++ W +AGERR+LCGLQ PG +NQQ F+GKVA+ DQSKVWPAGTCLGID+ Sbjct 250 FTMGMLWPGEKGWTEAGERRVLCGLQLPGADNQQQLFRGKVAEQDQSKVWPAGTCLGIDS 309 Query 236 TTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLA-PL 294 TTN P ++PVDC HAME++GTV+LAE+FP ++P EP+QD FIKD CTR+T+ Y+ P Sbjct 310 TTNLPTELPVDCDKAHAMEITGTVSLAEQFPGSVPPEPDQDAFIKDNCTRLTNDYMGNPD 369 Query 295 KLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAK-GALLINGQPPVP 353 R TTLTL Y T+TLPSW+AGSR V+C+IG+TLGNG W+TLVNSAK G LLINGQPPVP Sbjct 370 GFRATTLTLSYNTITLPSWTAGSRQVSCNIGSTLGNGAWSTLVNSAKSGQLLINGQPPVP 429 Query 354 PPDIPEERLNLPPIPL 369 PPDIP +RLN+PPIPL Sbjct 430 PPDIPADRLNMPPIPL 445 >gi|333992784|ref|YP_004525398.1| hypothetical protein JDM601_4144 [Mycobacterium sp. JDM601] gi|333488752|gb|AEF38144.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=369 Score = 422 bits (1086), Expect = 4e-116, Method: Compositional matrix adjust. Identities = 235/347 (68%), Positives = 271/347 (79%), Gaps = 12/347 (3%) Query 32 WPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGA----- 86 W R L+A+ATRR LLLTALGGLLIAGLVT +P +G P L G++++ P P G Sbjct 17 WLRTLQAAATRRTLLLTALGGLLIAGLVTVVPVLGEGPGGLLGHLSAEPPPGAGGKGPGP 76 Query 87 -------KINASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYG 139 K N + +R +GDCL WP+ + A +VSCA+EH+FEVA +DM+ FPG EYG Sbjct 77 GLGIGVGKGNEAIDRAVAGDCLNWPEDDLDGATVVSCAEEHKFEVAGPVDMKMFPGAEYG 136 Query 140 QNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCG 199 A PPS ARI+QI++EQCE++VRRYLG KFDP+SKF SMLW G+RAWRQ GERRMLCG Sbjct 137 PEAPPPSTARIEQITQEQCESSVRRYLGAKFDPHSKFVASMLWAGERAWRQHGERRMLCG 196 Query 200 LQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTV 259 LQ PG QQ+AF GKVADIDQSKVWP GTCLGID TNQP DVPVDCAAPH EV+GTV Sbjct 197 LQLPGVGGQQIAFTGKVADIDQSKVWPPGTCLGIDPATNQPNDVPVDCAAPHTKEVTGTV 256 Query 260 NLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRV 319 NLAERFPDALP EPEQD FIK+ CTR+TD YLAP++LR TTLTL Y T++LPSWSAGSR Sbjct 257 NLAERFPDALPPEPEQDAFIKETCTRLTDVYLAPVQLRDTTLTLTYATISLPSWSAGSRE 316 Query 320 VACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPP 366 VACS+GATLGNGGWA L+NSA+G LLINGQPPVPPP IP ERLN P Sbjct 317 VACSLGATLGNGGWAALINSARGPLLINGQPPVPPPSIPAERLNQLP 363 >gi|312137681|ref|YP_004005017.1| membrane protein [Rhodococcus equi 103S] gi|325675176|ref|ZP_08154862.1| hypothetical protein HMPREF0724_12644 [Rhodococcus equi ATCC 33707] gi|311887020|emb|CBH46329.1| putative membrane protein [Rhodococcus equi 103S] gi|325554137|gb|EGD23813.1| hypothetical protein HMPREF0724_12644 [Rhodococcus equi ATCC 33707] Length=357 Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 156/357 (44%), Positives = 201/357 (57%), Gaps = 5/357 (1%) Query 22 EAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPV 81 E QP P P R L A TRRAL L A+G +L A + E+L + ++ Sbjct 4 EQPQPTPHPERGRHLSAPVTRRALALVAIGAVLAAIATIFLAGGFDRGEKLPAHTSTVGP 63 Query 82 PSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQN 141 TGA +F +GDCL W + V CA H+FEVA ID+ +PG+E+G Sbjct 64 QPTGAVAGDAFGSATTGDCLTWSEADASDLEQVDCAQPHQFEVATDIDLSLYPGIEFGPG 123 Query 142 AAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQ 201 A P R ++ +EQC AV YL +FDP KF++ ++ PG+ W AGER + CGLQ Sbjct 124 AKFPGVLRFSELRDEQCAPAVNTYLNGRFDPKGKFSVGLINPGEAGW-SAGERTIRCGLQ 182 Query 202 SPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNL 261 G L F+G V DQSKVW GTC+GI+ N P D PVDCA PHA EV G ++L Sbjct 183 FSGVTGTLLPFQGLVEQQDQSKVWETGTCVGIN--QNVPSD-PVDCAQPHAFEVVGVIDL 239 Query 262 AERFPDALPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVV 320 A +FP +PS +QD F++ ACT + YL +P LR TLTL + L L SW GSR + Sbjct 240 ASQFPGGMPSVEDQDRFLEKACTDASTGYLGSPDVLRDKTLTLFWDNLDLDSWLVGSRKI 299 Query 321 ACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLPTPRPA 377 CSIG + G+AT+V SAKG +LINGQ PVPPP P+ R P+P P P P Sbjct 300 NCSIGQEVDGTGFATIVGSAKGDILINGQAPVPPPAAPDGRSVPTPLPGAAPLPAPG 356 >gi|333917769|ref|YP_004491350.1| hypothetical protein AS9A_0090 [Amycolicicoccus subflavus DQS3-9A1] gi|333479990|gb|AEF38550.1| hypothetical protein AS9A_0090 [Amycolicicoccus subflavus DQS3-9A1] Length=378 Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 132/325 (41%), Positives = 182/325 (56%), Gaps = 10/325 (3%) Query 42 RRALLLTALGGLLI--AGLVTAIPAVGRAPERLAG-YIASNPVPSTGAKINASFNRVASG 98 R+ L + AL LLI AG VT+ E+ + + P TGA +F +G Sbjct 55 RKGLRIAALVVLLILVAGGVTSFVLTQDFGEQEDEPSLTTVAAPETGAVAGEAFASAEAG 114 Query 99 DCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQC 158 DCL W G ++V C++EHRFEVA +D+ FPG E+G A PS R ++ + C Sbjct 115 DCLFWEAGDAGDLSLVECSEEHRFEVASVMDLAHFPGGEFGAEAEFPSELRFAELRAQVC 174 Query 159 EAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVAD 218 E AV YLG +FDP KF+++++ PG+ W AGER + CGLQ+ G + +G AD Sbjct 175 EPAVSDYLGARFDPRGKFSVNLINPGEAGW-NAGERTIRCGLQNVGTTGEVFPVRGHAAD 233 Query 219 IDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGF 278 DQS W G C+GI+ + P D PV C PHA EV G VNL + F + PS +QD F Sbjct 234 QDQSVTWEPGECIGIN--HDIPTD-PVPCEDPHAFEVVGIVNLVDEFGEGYPSPDDQDRF 290 Query 279 IKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLV 337 + + C +++ +L P +L LT + T TL SW AGSR+V C++GA G+AT+ Sbjct 291 LDERCRQLSAEFLGGPERLEELGLTAFWDTRTLSSWLAGSRLVNCAVGAQTEGAGFATIA 350 Query 338 NSAKGALLINGQPP--VPPPDIPEE 360 S +G INGQPP P PD PE+ Sbjct 351 GSVRGEFTINGQPPGDAPAPDAPED 375 >gi|226363328|ref|YP_002781110.1| hypothetical protein ROP_39180 [Rhodococcus opacus B4] gi|226241817|dbj|BAH52165.1| hypothetical protein [Rhodococcus opacus B4] Length=368 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 144/335 (43%), Positives = 192/335 (58%), Gaps = 10/335 (2%) Query 33 PRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASF 92 PR++ A+ TRRAL A+G ++ A AI E L + +TG+ +F Sbjct 23 PRSMSATTTRRALAAVAVGAVVAAIATFAIAGGFNRSENLPAHSTGAGPQATGSVEGDAF 82 Query 93 NRVASGDCLMW-----PDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSP 147 + +GDCL W P + A V CADEHRFEVA +D+ +PG E+G + P Sbjct 83 SSATAGDCLDWTPSNDPQEDRKDVAKVDCADEHRFEVAAPLDLSVYPGAEFGPGSRYPGA 142 Query 148 ARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNN 207 R + +E C AV YLG KFDP KF++ +++P + W AGER + CGLQ Sbjct 143 LRFAALRDEHCVPAVDTYLGAKFDPYGKFSVGLMFPSESGW-AAGERTLRCGLQFSSTAG 201 Query 208 QQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPD 267 L F GKVA+ DQS +W GTC+GI+ N P D PVDCA PHA EV V+LA +FP Sbjct 202 TLLPFAGKVAEQDQSNIWDPGTCIGIN--QNVPTD-PVDCAQPHAFEVISVVDLATQFPS 258 Query 268 ALPSEPEQDGFIKDACTRMTDAYLAPLK-LRTTTLTLIYPTLTLPSWSAGSRVVACSIGA 326 ++PS +QD +++ CT+ + YL LR TLTL + L L SW AGSR V CS+G Sbjct 259 SMPSVEDQDKYLEGVCTQAANEYLGSADALRNKTLTLFWDNLELDSWLAGSRRVNCSVGK 318 Query 327 TLGNGGWATLVNSAKGALLINGQPPVPPPDIPEER 361 GG++T+ SAKG +LING PVPPP +PE R Sbjct 319 ETDAGGFSTITGSAKGEILINGAAPVPPPPVPEGR 353 >gi|343926269|ref|ZP_08765778.1| hypothetical protein GOALK_056_01370 [Gordonia alkanivorans NBRC 16433] gi|343763898|dbj|GAA12704.1| hypothetical protein GOALK_056_01370 [Gordonia alkanivorans NBRC 16433] Length=396 Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 123/318 (39%), Positives = 177/318 (56%), Gaps = 9/318 (2%) Query 39 SATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASG 98 +ATR + + L +++ LV A+ AG + + V + +F + +G Sbjct 45 NATRNPVFVV-LAAIVVGALVAGGIALAMGVFDDAGSVGGSKVGEGERLVQNAFTQSVAG 103 Query 99 DCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQC 158 DCL WP+G P V CA +HRFEVA ID PG+E+G++A P P R I +EQC Sbjct 104 DCLDWPEGNPGQPTAVECAQKHRFEVAGGIDTSLIPGVEFGEDALWPGPERFAAIRDEQC 163 Query 159 EAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVAD 218 V +YL + DP +F++ M++P W + G R++ CG+Q G N Q + F G+VAD Sbjct 164 PVIVDQYLDGRLDPQGRFSVGMMYPSQAQWDK-GARQLRCGVQEDGANGQPVQFSGRVAD 222 Query 219 IDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEP----- 273 +QS VWP GTC+GID P PV+CA PHA + +G V+LA RF D + ++P Sbjct 223 QNQSYVWPEGTCIGIDPENRNPTGFPVNCAEPHAFQTTGIVDLAVRFGDRMSNKPWPATG 282 Query 274 EQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGG 332 Q+ ++ C + + + L TTL + + L+ PSW AGSR V C +G GG Sbjct 283 AQNNYLGSICPKQAERFAGGAAALDKTTLNVQWSVLSEPSWLAGSRKVVCYLGLPDKRGG 342 Query 333 WATLVNSAK-GALLINGQ 349 +ATLV AK GALLING+ Sbjct 343 FATLVGDAKDGALLINGK 360 >gi|111021022|ref|YP_703994.1| hypothetical protein RHA1_ro04039 [Rhodococcus jostii RHA1] gi|110820552|gb|ABG95836.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=368 Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 151/370 (41%), Positives = 203/370 (55%), Gaps = 13/370 (3%) Query 11 DPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPE 70 D + A P A QP + PR++ A+ TRRAL A G ++ A AI E Sbjct 4 DQSNGAEPQPKNAGQP---EKAPRSMSATTTRRALAAVAAGAVVAAIATFAIAGGFNRSE 60 Query 71 RLAGYIASNPVPSTGAKINASFNRVASGDCLMW-----PDGTPESAAIVSCADEHRFEVA 125 L + +TG+ +F A+GDCL W P + A V C++EHRFEVA Sbjct 61 NLPAHSTGAGPQATGSVEGDAFASAAAGDCLDWTPSNDPQEDRKDVAKVDCSEEHRFEVA 120 Query 126 ESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGD 185 +D+ +PG E+G + P R + +E C AV YLG KFDP KF++ +++P + Sbjct 121 APLDLSVYPGAEFGPGSRYPGALRFAALRDEHCVPAVDTYLGAKFDPYGKFSVGLMFPSE 180 Query 186 RAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPV 245 W AGER + CGLQ L F GKVA+ DQS +W GTC+GI+ N P D PV Sbjct 181 SGW-AAGERTLRCGLQFSSTAGTLLPFAGKVAEQDQSNIWDPGTCIGIN--QNVPTD-PV 236 Query 246 DCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLK-LRTTTLTLI 304 CA PHA EV V+LA +FP ++P+ +QD +++ CT+ + YL LR TLTL Sbjct 237 GCAQPHAFEVISVVDLATQFPSSMPTVEDQDKYLEGVCTQAANEYLGSADALRNKTLTLF 296 Query 305 YPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNL 364 + L L SW AGSR V CS+G GG++T+ SAKG +LING PVPPP +PE R Sbjct 297 WDNLELDSWLAGSRRVNCSVGKETDAGGFSTITGSAKGEILINGAAPVPPPPVPEGRSMP 356 Query 365 PPIPLQLPTP 374 P+P P P Sbjct 357 TPLPGAAPVP 366 >gi|226303683|ref|YP_002763641.1| hypothetical protein RER_01940 [Rhodococcus erythropolis PR4] gi|226182798|dbj|BAH30902.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=364 Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 132/306 (44%), Positives = 177/306 (58%), Gaps = 20/306 (6%) Query 83 STGAKINASFNRVASGDCLMW-----PDGTPESAAIVSCADEHRFEVAESIDMRTFPGME 137 +TG+ + +F A+GDCL W G + V C EHRFEVA +D+ FPG E Sbjct 71 ATGSTRDDAFTAAAAGDCLNWTPATESGGDRTDMSKVQCGTEHRFEVAGPLDLSVFPGAE 130 Query 138 YGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRML 197 +G + P R ++ +E C V YL +KFDP KF++ +++P + W +GER + Sbjct 131 FGPGSRYPGALRFAELRDEHCTPIVMSYLDSKFDPKGKFSVGLMFPSESGW-ASGERALR 189 Query 198 CGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSG 257 CGLQ + F G+VAD DQS VW GTC+GI+ N P D PVDCA PHA EV Sbjct 190 CGLQFSTTTGELQPFVGRVADQDQSNVWDVGTCIGIN--QNLPTD-PVDCAKPHAYEVIS 246 Query 258 TVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLK-LRTTTLTLIYPTLTLPSWSAG 316 ++L +FP A+PS +QD +++ CT+ ++ YL LR TLTL + ++L SW AG Sbjct 247 VIDLGTQFPGAMPSVEDQDRYLEGVCTQASNEYLGSADALRDKTLTLFWDNISLESWLAG 306 Query 317 SRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLPTPRP 376 SR V CSIG + GG+A + SAKG +LING PVPPP PE R LPTP P Sbjct 307 SRRVNCSIGKEVETGGFAAITGSAKGEILINGAAPVPPPAAPEGR--------SLPTPLP 358 Query 377 --APPA 380 APP+ Sbjct 359 GAAPPS 364 >gi|229494076|ref|ZP_04387843.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319009|gb|EEN84863.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=368 Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 132/306 (44%), Positives = 177/306 (58%), Gaps = 20/306 (6%) Query 83 STGAKINASFNRVASGDCLMW-----PDGTPESAAIVSCADEHRFEVAESIDMRTFPGME 137 +TG+ + +F A+GDCL W G + V C EHRFEVA +D+ FPG E Sbjct 75 ATGSTRDDAFTAAAAGDCLNWTPATESGGDRTDMSKVQCGTEHRFEVAGPLDLSVFPGAE 134 Query 138 YGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRML 197 +G + P R ++ +E C V YL +KFDP KF++ +++P + W +GER + Sbjct 135 FGPGSRYPGALRFAELRDEHCTPIVMSYLDSKFDPKGKFSVGLMFPSESGW-ASGERALR 193 Query 198 CGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSG 257 CGLQ + F G+VAD DQS VW GTC+GI+ N P D PVDCA PHA EV Sbjct 194 CGLQFSTTTGELQPFVGRVADQDQSNVWDVGTCIGIN--QNLPTD-PVDCAKPHAYEVIS 250 Query 258 TVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLK-LRTTTLTLIYPTLTLPSWSAG 316 ++L +FP A+PS +QD +++ CT+ ++ YL LR TLTL + ++L SW AG Sbjct 251 VIDLGTQFPGAMPSVEDQDRYLEGVCTQASNEYLGSADALRDKTLTLFWDNISLESWLAG 310 Query 317 SRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLPTPRP 376 SR V CSIG + GG+A + SAKG +LING PVPPP PE R LPTP P Sbjct 311 SRRVNCSIGKEVETGGFAAITGSAKGDILINGAAPVPPPAAPEGR--------SLPTPLP 362 Query 377 --APPA 380 APP+ Sbjct 363 GAAPPS 368 >gi|262200211|ref|YP_003271419.1| hypothetical protein Gbro_0178 [Gordonia bronchialis DSM 43247] gi|262083558|gb|ACY19526.1| hypothetical protein Gbro_0178 [Gordonia bronchialis DSM 43247] Length=353 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 134/338 (40%), Positives = 185/338 (55%), Gaps = 22/338 (6%) Query 52 GLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFNRVASGDCLMWPDGTPESA 111 G L+ G++ AVG + +G + ++ + + + F R +GDCL WP G P Sbjct 16 GALVMGVIAL--AVGLFDD--SGSVGTSDIGESERIDDNDFARSVAGDCLDWPAGNPGQP 71 Query 112 AIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFD 171 V C +HRFEVA ++D FPG E+G+ A P R I +EQC V YL + D Sbjct 72 VKVGCEQKHRFEVAGALDTSVFPGAEFGEKAPWPGDVRFGTIRDEQCPVIVGEYLAGRLD 131 Query 172 PNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCL 231 P+ +F++ M++P W + G R + CGLQ GP+ Q +AF G+VAD +QS+VWP GTC+ Sbjct 132 PHGRFSVGMMYPSQYQWDR-GARALRCGLQETGPDGQPVAFSGRVADQNQSRVWPEGTCI 190 Query 232 GIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEP-----EQDGFIKDACTRM 286 GID T + PV+CA PH+ + +G V+LA RF D L +P Q+ ++ C Sbjct 191 GIDTDTRKATGFPVNCAEPHSFQATGIVDLAVRFGDKLSGKPWPNFRTQNDYLDGICPVQ 250 Query 287 TDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGA-- 343 + ++ KL TTL + + L SW AGSR V C +G GG+ATLV AKG Sbjct 251 AERFVGGKAKLEATTLNVQWSVLEETSWLAGSRKVVCYLGLPDRRGGFATLVGDAKGGGD 310 Query 344 -LLINGQPPVPPPDIPEERLNLPPIPLQLPTPRPAPPA 380 LLING+ PVPPP P R LPTP P PP Sbjct 311 LLLINGKRPVPPPQAPPGR--------ALPTPVPLPPG 340 >gi|54022103|ref|YP_116345.1| hypothetical protein nfa1390 [Nocardia farcinica IFM 10152] gi|54013611|dbj|BAD54981.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=384 Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 121/324 (38%), Positives = 174/324 (54%), Gaps = 7/324 (2%) Query 34 RALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASFN 93 R +R SA + L A + + + G E+ G A NP ++ F Sbjct 45 REVRLSAPKLRWGLLAAAAGAVVAALVTLFVTGFENEK--GLEAHNPAAPAHTVLDKEFG 102 Query 94 RVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQI 153 ++GDCL W V+C + H FEVA IDM +PG+E+G + P R+ ++ Sbjct 103 TASAGDCLTWSKPDRSDLMKVACDNRHLFEVAADIDMSRYPGVEFGPGSRFPDSLRLTEL 162 Query 154 SEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFK 213 EE C AV+RY+ KFDP ++ + +++P W+ G+R + CGLQ L Sbjct 163 KEEHCVPAVQRYMNGKFDPRGRYVVGLMYPSPEGWKN-GDRTLRCGLQFSASTGAPLPTT 221 Query 214 GKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSEP 273 G A DQSKV+ AGTCLGI+ N P D PVDCA HA+E+ TV+L F P++ Sbjct 222 GSAATQDQSKVFAAGTCLGINQ--NLPTD-PVDCAQEHAVEIVSTVDLGTHFTGGPPAKA 278 Query 274 EQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGG 332 +QD F+++ CT + YL +P +R TLTL + + SW AGSR + C IG G Sbjct 279 DQDKFVEEQCTTAVNDYLGSPDAIRNKTLTLFFDYVDARSWLAGSRKLDCMIGKGTDREG 338 Query 333 WATLVNSAKGALLINGQPPVPPPD 356 +A ++ SA+G +LINGQ PVPPP+ Sbjct 339 FAPIIGSARGDILINGQAPVPPPN 362 >gi|326384325|ref|ZP_08206006.1| hypothetical protein SCNU_15379 [Gordonia neofelifaecis NRRL B-59395] gi|326196923|gb|EGD54116.1| hypothetical protein SCNU_15379 [Gordonia neofelifaecis NRRL B-59395] Length=473 Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 123/358 (35%), Positives = 178/358 (50%), Gaps = 20/358 (5%) Query 35 ALRASATR--RALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINASF 92 A +ATR + + LG +L+ LV + + G + S+ + + F Sbjct 115 ADETAATRVPKRSMRIVLGAILVGALVAGGVMLATGVYKDVGDVGSSVIGEGSSVQQNDF 174 Query 93 NRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQ 152 R +GDCL W +P V+C HRFEVA +D FP E+ A P R + Sbjct 175 TRSEAGDCLTWNADSPGEPTAVTCDTPHRFEVAGVLDTSNFPTTEFSSAAPWPGVERFAE 234 Query 153 ISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAF 212 I +E C V RYLG DP +F+ +++P W + G R + CG++ PG Q F Sbjct 235 IRDENCSVIVDRYLGGGLDPQGRFSPGLMFPSKVEWEK-GVRSLRCGIEQPGAKGVQEEF 293 Query 213 KGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSE 272 G+V D+DQS WP GTC+GID T + V+CA PHA +V+G V+L++RF + Sbjct 294 VGRVRDVDQSFTWPDGTCIGIDPATRKATSGVVNCAEPHAFQVTGGVDLSQRFGGRNSGK 353 Query 273 P-----EQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGA 326 P +Q+ +++ C T+ + K + TTL + + ++ SW GSR V C A Sbjct 354 PWPTVDDQNEYLRGICPTQTNKFFGGAQKFKATTLNVQWSVISEVSWLTGSRRVVC-YAA 412 Query 327 TLGNGGWATLVNSAK-GALLINGQPPVPPPDIPEERLNLPPIPL---------QLPTP 374 GG+ATLV A+ +LLING+ P PP D P R P+PL QLP P Sbjct 413 LPDRGGFATLVGDARTDSLLINGKIPTPPDDGPPGRSVGEPVPLPPGYTPNDAQLPAP 470 >gi|317507491|ref|ZP_07965216.1| serine/arginine repetitive matrix protein 1 [Segniliparus rugosus ATCC BAA-974] gi|316254204|gb|EFV13549.1| serine/arginine repetitive matrix protein 1 [Segniliparus rugosus ATCC BAA-974] Length=356 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 108/257 (43%), Positives = 149/257 (58%), Gaps = 13/257 (5%) Query 104 PDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVR 163 P G P A+V C EH FE+A SI++ +PG + ++A P RI +++ CE AV Sbjct 90 PSGRP--GAVVDCKHEHVFELAASINLNDYPGSAF-TSSAYPDQKRIAAWNQQLCEPAVS 146 Query 164 RYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSK 223 YLG + D +F + L G++AW + GE + CGL+ PG +++ L F GKVAD DQS Sbjct 147 AYLGERLDSLGRFKVGSLLSGEKAWAR-GEHVLRCGLEMPGGSHKLLVFTGKVADQDQSL 205 Query 224 VWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFP---DAL-PSEPEQDGFI 279 + G C+G A N P D PVDC+ PHA E+ G +LA +FP DA PSE EQ+ + Sbjct 206 TYDTGVCVG--AERNMPTD-PVDCSQPHAFEIVGQADLAAQFPGRADANPPSEDEQNDKL 262 Query 280 KDACTRMTDAYLAPL-KLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVN 338 KD C + ++YL LR TTL + + L SW GSR C + A + G+A L Sbjct 263 KDLCEKAAESYLGNADHLRDTTLDVNWTILKPQSWLVGSRKAVCFL-AKHNDQGFAVLGG 321 Query 339 SAKGALLINGQPPVPPP 355 S KG+LL++G PVPPP Sbjct 322 SVKGSLLVDGAKPVPPP 338 >gi|305680280|ref|ZP_07403088.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305659811|gb|EFM49310.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=340 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 97/270 (36%), Positives = 142/270 (53%), Gaps = 8/270 (2%) Query 90 ASFNRVASGDCLMWPDGTPESAAI--VSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSP 147 ASF +G CL W D A C HRFEV+ D+ T+P E+G AA P+ Sbjct 58 ASFTSADAGSCLTWQDSGTTITAFEQTDCGGPHRFEVSSREDLSTYPSSEFGAKAAMPNT 117 Query 148 ARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNN 207 R Q+ EE C +YLG FDP +++++ + P AW AG+R +LCG+Q+ Sbjct 118 TRQAQLREELCMDPTMKYLGGTFDPLGRYSVASILPPQAAWN-AGDRTLLCGIQATDEAG 176 Query 208 QQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPD 267 + + GKVA DQ++++ G C+ +D ++ +DCA PH +EV+ V+L + FP+ Sbjct 177 KVITTNGKVAQQDQARIFGVGECVAVDGANSEK---QIDCAQPHQLEVTQIVDLLQVFPN 233 Query 268 ALPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGA 326 PS +QD ++ CT+ Y+ +L +TL ++ T+ SW GS V CS+ Sbjct 234 NTPSIEDQDNHLRTVCTQAAKDYIGGDDQLYKSTLQPLWATIPANSWDRGSHSVNCSLMF 293 Query 327 TLGNGGWATLVNSAKGALLINGQPPVPPPD 356 NG TL S KG INGQPP PD Sbjct 294 N-DNGHLGTLAGSVKGQFTINGQPPAERPD 322 >gi|237784843|ref|YP_002905548.1| hypothetical protein ckrop_0213 [Corynebacterium kroppenstedtii DSM 44385] gi|237757755|gb|ACR17005.1| putative secreted protein [Corynebacterium kroppenstedtii DSM 44385] Length=343 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 117/330 (36%), Positives = 163/330 (50%), Gaps = 24/330 (7%) Query 42 RRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASNPVPSTGAKINA---SFNRVASG 98 RR+ ++ L LL G +A A E+ + + P + G + SF +G Sbjct 6 RRSSVIVGLVALLCGG--SAAGTFTYAQEKHSDSASDTPHTAPGEDKESKQKSFTNAEAG 63 Query 99 DCLMWP---DGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISE 155 CL W DGT V CA HRFEV+ ++ +P E+G NA S R ++++ Sbjct 64 QCLDWKTSSDGTVSDFQTVDCAKSHRFEVSHRENLAAYPASEFGSNAGMLSRKRQAELTD 123 Query 156 EQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGK 215 E C+ YLG KFDP +FTI+ + P ++W G+R +LCGLQ G N A GK Sbjct 124 ELCKQPTLSYLGGKFDPTGRFTIAPILPPQKSWAD-GDRTLLCGLQVTGNNGHASALTGK 182 Query 216 VADIDQSKVWPAGTCLGI----DATTNQ------PIDVP---VDCAAPHAMEVSGTVNLA 262 AD DQS V+ G C+ I D N+ +D VDC A H EV+ ++L Sbjct 183 AADQDQSPVFKPGECVAITEKKDVNQNKQTEGDTSVDATAQVVDCNADHQYEVTDIIDLG 242 Query 263 ERFPDALPSEPEQDGFIKDACTRMTDAYLA-PLKLRTTTLTLIYPTLTLPSWSAGSRVVA 321 E+F + PS +Q+ ++ CT A++ KL +TL + TLT SW GSR V Sbjct 243 EKFKE-YPSIEDQNEYLNKRCTDSVTAFIGGDDKLYNSTLEPFWTTLTEDSWKGGSRNVN 301 Query 322 CSIGATLGNGGWATLVNSAKGALLINGQPP 351 CS+ T N +TL SAKG ING PP Sbjct 302 CSLIKTGDNNSLSTLKGSAKGEFTINGNPP 331 >gi|225022354|ref|ZP_03711546.1| hypothetical protein CORMATOL_02393 [Corynebacterium matruchotii ATCC 33806] gi|224944867|gb|EEG26076.1| hypothetical protein CORMATOL_02393 [Corynebacterium matruchotii ATCC 33806] Length=340 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 96/270 (36%), Positives = 141/270 (53%), Gaps = 8/270 (2%) Query 90 ASFNRVASGDCLMWPDGTPESAAI--VSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSP 147 ASF +G CL W D A C HRFEV+ D+ T+P E+G AA P+ Sbjct 58 ASFTSADAGSCLTWQDSGTTITAFEQTDCGGPHRFEVSSREDLSTYPSSEFGAKAAMPNT 117 Query 148 ARIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNN 207 R Q+ EE C +YLG FDP +++++ + P AW AG+R +LCG+Q+ Sbjct 118 TRQAQLREELCMDPTMKYLGGTFDPLGRYSVASILPPQAAWN-AGDRTLLCGIQATDEAG 176 Query 208 QQLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPD 267 + + GKVA DQ++++ G C+ +D ++ +DC PH +EV+ V+L + FP+ Sbjct 177 KVITTNGKVAQQDQARIFGVGECVAVDGANSEK---QIDCTQPHQLEVTQIVDLLQVFPN 233 Query 268 ALPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGA 326 PS +QD ++ CT+ Y+ +L +TL ++ T+ SW GS V CS+ Sbjct 234 NTPSIEDQDNHLRTVCTQAAKDYIGGDDQLYKSTLQPLWATIPANSWDRGSHSVNCSLMF 293 Query 327 TLGNGGWATLVNSAKGALLINGQPPVPPPD 356 NG TL S KG INGQPP PD Sbjct 294 N-DNGHLGTLAGSVKGQFTINGQPPAERPD 322 >gi|227501876|ref|ZP_03931925.1| secreted protein [Corynebacterium accolens ATCC 49725] gi|227077370|gb|EEI15333.1| secreted protein [Corynebacterium accolens ATCC 49725] Length=349 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 100/290 (35%), Positives = 157/290 (55%), Gaps = 18/290 (6%) Query 92 FNRVASGDCLMW---PDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPA 148 F ++G C+ W DG+ S V C+++HRFEV+ D+ +P E+G +A+ P+ Sbjct 71 FTSASAGSCVTWDINEDGSAASFKEVECSEQHRFEVSTVEDLSVYPTSEFGPDASRPALT 130 Query 149 RIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQ 208 R Q+ +E CE+A YL +K+DP+ K+ I+ + P + AW G+R +LCGLQ+ + Sbjct 131 RQHQLRDELCESATVSYLHSKWDPHGKYDIASILPPESAWNN-GDRTLLCGLQTTDDHGV 189 Query 209 QLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDA 268 G V +Q+ + G CL ID +Q + VDCA PH +E ++L ++FPDA Sbjct 190 PQLTTGNVEASEQANLAKPGECLAID---DQQVPHVVDCAQPHQLETVSVIDLGKKFPDA 246 Query 269 LPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGAT 327 P E D F+ D+CT + YL +L +TL + T++ SW+ G++ V CS+ Sbjct 247 YPDGKEMDKFLSDSCTAAAEDYLGGEEQLYQSTLQPFWGTVSEESWNGGTKSVNCSLVHA 306 Query 328 LGNGGWATLVNSAKG---ALLINGQPPVPPPDIPEERLNLPPIPLQLPTP 374 +GG++++ +A G AL I+G P PEER PI P P Sbjct 307 RDDGGFSSITGAATGGRQALSIDGNP-------PEERPERNPIRDNKPAP 349 >gi|306837121|ref|ZP_07470058.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304566969|gb|EFM42597.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length=349 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 100/290 (35%), Positives = 157/290 (55%), Gaps = 18/290 (6%) Query 92 FNRVASGDCLMW---PDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPA 148 F ++G C+ W DG+ S V C+++HRFEV+ D+ +P E+G +A+ P+ Sbjct 71 FTSASAGSCVTWDINEDGSAASFKEVECSEQHRFEVSTVEDLSVYPTSEFGPDASRPALT 130 Query 149 RIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQ 208 R Q+ +E CE+A YL +K+DP+ K+ I+ + P + AW G+R +LCGLQ+ + Sbjct 131 RQHQLRDELCESATVSYLHSKWDPHGKYDIASILPPESAWNN-GDRTLLCGLQTTDDHGV 189 Query 209 QLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDA 268 G V +Q+ + G CL ID +Q + VDCA PH +E ++L ++FPDA Sbjct 190 PQLTTGNVEASEQANLAKPGECLAID---DQQVPHVVDCAQPHQLETVSVIDLGKKFPDA 246 Query 269 LPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGAT 327 P E D F+ D+CT + YL +L +TL + T++ SW+ G++ V CS+ Sbjct 247 YPDGKEMDKFLSDSCTAAAEDYLGGEEQLYQSTLQPFWGTVSEESWNGGTKSVNCSLVHA 306 Query 328 LGNGGWATLVNSAKG---ALLINGQPPVPPPDIPEERLNLPPIPLQLPTP 374 +GG++++ +A G AL I+G P PEER PI P P Sbjct 307 RDDGGFSSITGAATGGRQALSIDGNP-------PEERPERNPIRDNKPAP 349 >gi|311740370|ref|ZP_07714199.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304554|gb|EFQ80628.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length=357 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 95/272 (35%), Positives = 149/272 (55%), Gaps = 11/272 (4%) Query 92 FNRVASGDCLMWP---DGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPA 148 F A+G CL W DG+ V C+++HRFEV+++ D+ +P E+G +A P+ Sbjct 65 FTAAAAGACLTWDIAQDGSATGFKEVPCSEQHRFEVSKTEDLSVYPTSEFGPDATRPALT 124 Query 149 RIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQ 208 R Q+ +E CE+A YL K+DPN K+ ++ + P AW + G+R +LCGLQ+ + Sbjct 125 RQHQLRDELCESATVGYLHGKWDPNGKYDVASILPPQSAWDR-GDRTLLCGLQTTDDHGV 183 Query 209 QLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDA 268 G V +Q+ + G CL ID ++ + VDCA PH ME +++ ++FPD Sbjct 184 PQLTAGNVEASEQANLAKPGECLAID---DKQVPHVVDCAKPHQMETVSVIDVGKQFPDG 240 Query 269 LPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGAT 327 P + D F+ D CT T+ YL +L +TL + ++T SW+ G++ V CS+ Sbjct 241 YPDGKDMDKFLSDTCTAATEDYLGGEEQLYQSTLQPFWGSITEASWNGGTKSVNCSLVHA 300 Query 328 LGNGGWATLVNSAKG---ALLINGQPPVPPPD 356 GG++ + SA G AL I+GQPP P+ Sbjct 301 REGGGFSAITGSATGGRQALTIDGQPPEERPE 332 >gi|255324116|ref|ZP_05365240.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255298817|gb|EET78110.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length=357 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 95/272 (35%), Positives = 149/272 (55%), Gaps = 11/272 (4%) Query 92 FNRVASGDCLMWP---DGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPA 148 F A+G CL W DG+ V C+++HRFEV+++ D+ +P E+G +A P+ Sbjct 65 FTAAAAGACLTWDIAQDGSATGFKEVPCSEQHRFEVSKTEDLSVYPTSEFGPDANRPALT 124 Query 149 RIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQ 208 R Q+ +E CE+A YL K+DPN K+ ++ + P AW + G+R +LCGLQ+ + Sbjct 125 RQHQLRDELCESATVGYLHGKWDPNGKYDVASILPPQSAWDR-GDRTLLCGLQTTDDHGV 183 Query 209 QLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDA 268 G V +Q+ + G CL ID ++ + VDCA PH ME +++ ++FPD Sbjct 184 PQLTTGNVEASEQANLAKPGECLAID---DKQVPHVVDCAKPHQMETVSVIDVGKQFPDG 240 Query 269 LPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGAT 327 P + D F+ D CT T+ YL +L +TL + ++T SW+ G++ V CS+ Sbjct 241 YPDGKDMDKFLSDTCTAATEDYLGGEEQLYQSTLQPFWGSITEASWNGGTKSVNCSLVHA 300 Query 328 LGNGGWATLVNSAKG---ALLINGQPPVPPPD 356 GG++ + SA G AL I+GQPP P+ Sbjct 301 RKGGGFSAITGSATGGRQALTIDGQPPEERPE 332 >gi|134096772|ref|YP_001102433.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338] gi|291005184|ref|ZP_06563157.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338] gi|133909395|emb|CAL99507.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338] Length=332 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 109/320 (35%), Positives = 171/320 (54%), Gaps = 24/320 (7%) Query 37 RASATRRALLLTALGGLLIAGLVTAIPA--VGRAPERLAGYIASNPVPSTGAKINASFNR 94 R TR ++ A+G +LI L++A+ G G I S P P A F+ Sbjct 13 RKPHTRLVMISAAIGAMLIL-LISALLNWPTGGDGVGGPGRIGSAPAP------RAVFSA 65 Query 95 VASGDCLMWPDGTPESAAI--VSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQ 152 A G CL W + P++A I V+C++ H FEV + D++ E+G A P + QQ Sbjct 66 KA-GTCLNWTE--PDAADIRQVTCSEPHLFEVTGTADLKG----EFGPQAPFPDTEQWQQ 118 Query 153 ISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAF 212 + ++C ++L +FDP+ +F + P ++ W + G+R + CGLQ PGP+ + Sbjct 119 LKTDRCTQVSTQFLSGRFDPHGRFAVGAFTPSEQGWAE-GDRTLHCGLQQPGPSGKLYRI 177 Query 213 KGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDALPSE 272 G + IDQS V+ G CLGI+ T + PVDC+ H++E++G V+L ++FP+ P+ Sbjct 178 SGNASKIDQSNVYDEGRCLGINGTA---VWDPVDCSQLHSVEITGVVDLGQQFPEGFPAV 234 Query 273 PEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGATLGNG 331 P+QD F+ C +T AY P +R LT + TL + SW AGSR V C + A L +G Sbjct 235 PDQDNFLATRCGELTAAYAGGPNVVRDKGLTTYWDTLPMESWDAGSRKVNCKVSAQLPDG 294 Query 332 -GWATLVNSAKGALLINGQP 350 G A + KG + ++ +P Sbjct 295 SGLAPVTGGVKGEVRVDKEP 314 >gi|262183295|ref|ZP_06042716.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975] Length=371 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 97/271 (36%), Positives = 141/271 (53%), Gaps = 12/271 (4%) Query 92 FNRVASGDCLMW---PDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPA 148 F ++G C+ W PDGT +SC HRFEV+ D+ T+P E+G NA P Sbjct 70 FTTASAGACVTWDIAPDGTATGFEQISCDKPHRFEVSAREDLSTYPTSEFGPNATRPDIT 129 Query 149 RIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQ 208 R + +E CE YL K+DPN ++ I+ + P +W Q G+R +LCGLQ+ N Sbjct 130 RQNALRDELCEVPTVSYLNGKWDPNGRYDIASILPPAASWDQ-GDRTLLCGLQTTDANGV 188 Query 209 QLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDA 268 GKV+++DQ+ V G C +D ++ V C PH ME +NLAE+FPD Sbjct 189 PQESTGKVSEVDQAVVAKPGECRKVD---DKQALTTVPCQEPHQMETVSVINLAEKFPDG 245 Query 269 LPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGAT 327 PS+ + D F+ + CT+ YL L +TL + + +W +GSR V CS+ Sbjct 246 YPSDEDMDKFLSETCTQNAMDYLGGEENLYQSTLQPFWGAMNRETWESGSRSVNCSL-IH 304 Query 328 LGNGGWATLVNSAKG---ALLINGQPPVPPP 355 + +G ++ + SA G AL ING PP P Sbjct 305 IKDGHFSEITGSATGGREALSINGAPPTEQP 335 >gi|227834216|ref|YP_002835923.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975] gi|227455232|gb|ACP33985.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975] Length=375 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 97/271 (36%), Positives = 141/271 (53%), Gaps = 12/271 (4%) Query 92 FNRVASGDCLMW---PDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPA 148 F ++G C+ W PDGT +SC HRFEV+ D+ T+P E+G NA P Sbjct 74 FTTASAGACVTWDIAPDGTATGFEQISCDKPHRFEVSAREDLSTYPTSEFGPNATRPDIT 133 Query 149 RIQQISEEQCEAAVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQ 208 R + +E CE YL K+DPN ++ I+ + P +W Q G+R +LCGLQ+ N Sbjct 134 RQNALRDELCEVPTVSYLNGKWDPNGRYDIASILPPAASWDQ-GDRTLLCGLQTTDANGV 192 Query 209 QLAFKGKVADIDQSKVWPAGTCLGIDATTNQPIDVPVDCAAPHAMEVSGTVNLAERFPDA 268 GKV+++DQ+ V G C +D ++ V C PH ME +NLAE+FPD Sbjct 193 PQESTGKVSEVDQAVVAKPGECRKVD---DKQALTTVPCQEPHQMETVSVINLAEKFPDG 249 Query 269 LPSEPEQDGFIKDACTRMTDAYL-APLKLRTTTLTLIYPTLTLPSWSAGSRVVACSIGAT 327 PS+ + D F+ + CT+ YL L +TL + + +W +GSR V CS+ Sbjct 250 YPSDEDMDKFLSETCTQNAMDYLGGEENLYQSTLQPFWGAMNRETWESGSRSVNCSL-IH 308 Query 328 LGNGGWATLVNSAKG---ALLINGQPPVPPP 355 + +G ++ + SA G AL ING PP P Sbjct 309 IKDGHFSEITGSATGGREALSINGAPPTEQP 339 Lambda K H 0.314 0.133 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 930863295684 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40