BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3848 Length=302 Score E Sequences producing significant alignments: (Bits) Value gi|15610984|ref|NP_218365.1| transmembrane protein [Mycobacteriu... 585 4e-165 gi|31795022|ref|NP_857515.1| transmembrane protein [Mycobacteriu... 584 5e-165 gi|289755982|ref|ZP_06515360.1| transmembrane protein [Mycobacte... 379 3e-103 gi|342860100|ref|ZP_08716752.1| hypothetical protein MCOL_14515 ... 265 7e-69 gi|240168324|ref|ZP_04746983.1| hypothetical protein MkanA1_0336... 263 3e-68 gi|333992800|ref|YP_004525414.1| hypothetical protein JDM601_416... 259 3e-67 gi|183985367|ref|YP_001853658.1| hypothetical protein MMAR_5398 ... 256 2e-66 gi|118620034|ref|YP_908366.1| hypothetical protein MUL_5020 [Myc... 255 7e-66 gi|108802009|ref|YP_642206.1| hypothetical protein Mmcs_5046 [My... 228 1e-57 gi|126437988|ref|YP_001073679.1| hypothetical protein Mjls_5425 ... 226 3e-57 gi|229492838|ref|ZP_04386636.1| putative membrane protein [Rhodo... 206 5e-51 gi|226303647|ref|YP_002763605.1| hypothetical protein RER_01580 ... 204 2e-50 gi|315443069|ref|YP_004075948.1| hypothetical protein Mspyr1_144... 202 5e-50 gi|145222604|ref|YP_001133282.1| hypothetical protein Mflv_2016 ... 201 9e-50 gi|118471238|ref|YP_889575.1| hypothetical protein MSMEG_5329 [M... 201 1e-49 gi|120405660|ref|YP_955489.1| hypothetical protein Mvan_4708 [My... 199 5e-49 gi|312137652|ref|YP_004004988.1| integral membrane protein [Rhod... 196 3e-48 gi|262200188|ref|YP_003271396.1| hypothetical protein Gbro_0155 ... 195 7e-48 gi|111020988|ref|YP_703960.1| hypothetical protein RHA1_ro04005 ... 194 1e-47 gi|326384363|ref|ZP_08206044.1| hypothetical protein SCNU_15569 ... 193 2e-47 gi|226363293|ref|YP_002781075.1| hypothetical protein ROP_38830 ... 192 6e-47 gi|54022080|ref|YP_116322.1| hypothetical protein nfa1160 [Nocar... 189 4e-46 gi|343926292|ref|ZP_08765801.1| hypothetical protein GOALK_056_0... 184 2e-44 gi|296137875|ref|YP_003645118.1| hypothetical protein Tpau_0125 ... 181 1e-43 gi|291007580|ref|ZP_06565553.1| hypothetical protein SeryN2_2389... 169 6e-40 gi|134098141|ref|YP_001103802.1| hypothetical protein SACE_1555 ... 168 8e-40 gi|256376574|ref|YP_003100234.1| hypothetical protein Amir_2448 ... 163 3e-38 gi|331695445|ref|YP_004331684.1| hypothetical protein Psed_1594 ... 160 2e-37 gi|238059348|ref|ZP_04604057.1| hypothetical protein MCAG_00314 ... 156 3e-36 gi|325002912|ref|ZP_08124024.1| hypothetical protein PseP1_29295... 155 1e-35 gi|271962311|ref|YP_003336507.1| hypothetical protein Sros_0745 ... 152 8e-35 gi|159037857|ref|YP_001537110.1| hypothetical protein Sare_2260 ... 151 1e-34 gi|330468665|ref|YP_004406408.1| hypothetical protein VAB18032_2... 149 4e-34 gi|302867874|ref|YP_003836511.1| hypothetical protein Micau_3407... 147 1e-33 gi|326328990|ref|ZP_08195320.1| putative membrane protein [Nocar... 147 2e-33 gi|84495150|ref|ZP_00994269.1| hypothetical protein JNB_10129 [J... 146 4e-33 gi|145594649|ref|YP_001158946.1| hypothetical protein Strop_2117... 144 2e-32 gi|189346754|ref|YP_001943283.1| hypothetical protein Clim_1237 ... 142 4e-32 gi|296268351|ref|YP_003650983.1| hypothetical protein Tbis_0360 ... 142 5e-32 gi|256824874|ref|YP_003148834.1| hypothetical protein Ksed_10240... 141 1e-31 gi|194336476|ref|YP_002018270.1| hypothetical protein Ppha_1390 ... 140 3e-31 gi|119357123|ref|YP_911767.1| hypothetical protein Cpha266_1312 ... 140 3e-31 gi|110597558|ref|ZP_01385844.1| Protein of unknown function UPF0... 139 4e-31 gi|83589263|ref|YP_429272.1| hypothetical protein Moth_0395 [Moo... 139 8e-31 gi|21673921|ref|NP_661986.1| hypothetical protein CT1095 [Chloro... 135 1e-29 gi|297564019|ref|YP_003682992.1| protein of unknown function UPF... 134 1e-29 gi|72163062|ref|YP_290719.1| hypothetical protein Tfu_2663 [Ther... 134 1e-29 gi|78188765|ref|YP_379103.1| hypothetical protein Cag_0794 [Chlo... 132 5e-29 gi|328953104|ref|YP_004370438.1| protein of unknown function UPF... 132 5e-29 gi|194333906|ref|YP_002015766.1| hypothetical protein Paes_1084 ... 132 7e-29 >gi|15610984|ref|NP_218365.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15843479|ref|NP_338516.1| hypothetical protein MT3963 [Mycobacterium tuberculosis CDC1551] gi|148663716|ref|YP_001285239.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] 71 more sequence titles Length=302 Score = 585 bits (1507), Expect = 4e-165, Method: Compositional matrix adjust. Identities = 302/302 (100%), Positives = 302/302 (100%), Gaps = 0/302 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG Sbjct 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK Sbjct 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG Sbjct 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS 240 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS Sbjct 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS 240 Query 241 VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR 300 VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR Sbjct 241 VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR 300 Query 301 SS 302 SS Sbjct 301 SS 302 >gi|31795022|ref|NP_857515.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|121639766|ref|YP_979990.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992261|ref|YP_002646951.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31620620|emb|CAD96064.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121495414|emb|CAL73901.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775377|dbj|BAH28183.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341603787|emb|CCC66468.1| probable conserved transmembrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=302 Score = 584 bits (1506), Expect = 5e-165, Method: Compositional matrix adjust. Identities = 301/302 (99%), Positives = 302/302 (100%), Gaps = 0/302 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG Sbjct 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK Sbjct 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG Sbjct 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS 240 LWLLFDDALGFRS+AIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS Sbjct 181 LWLLFDDALGFRSIAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRPERSS 240 Query 241 VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR 300 VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR Sbjct 241 VAPGHPGSILLPLPEVSLRGRRPPSGSPDERCADPGSKGGSRRISVGCWLPGVGRIRPTR 300 Query 301 SS 302 SS Sbjct 301 SS 302 >gi|289755982|ref|ZP_06515360.1| transmembrane protein [Mycobacterium tuberculosis EAS054] gi|289696569|gb|EFD63998.1| transmembrane protein [Mycobacterium tuberculosis EAS054] Length=216 Score = 379 bits (973), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 198/200 (99%), Positives = 198/200 (99%), Gaps = 0/200 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG Sbjct 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK Sbjct 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG Sbjct 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 Query 181 LWLLFDDALGFRSVAIAVTA 200 LWLLFDDALGFRSVAIA A Sbjct 181 LWLLFDDALGFRSVAIAALA 200 >gi|342860100|ref|ZP_08716752.1| hypothetical protein MCOL_14515 [Mycobacterium colombiense CECT 3035] gi|342132478|gb|EGT85707.1| hypothetical protein MCOL_14515 [Mycobacterium colombiense CECT 3035] Length=233 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 143/192 (75%), Positives = 160/192 (84%), Gaps = 1/192 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAATLL+LG VF+AELGDRSQLITMTY LRYRWWVVLTGVA+AAFTVHGV+V IGHFLG Sbjct 1 MLAATLLTLGVVFVAELGDRSQLITMTYALRYRWWVVLTGVALAAFTVHGVSVTIGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +PARP A SA+AFL FAVW WRE A+D ET +EPR A TVVSSFALAE+ DK Sbjct 61 AALPARPLAIASALAFLAFAVWAWREGAATD-ETVSQPSEPRFAFLTVVSSFALAEMSDK 119 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATVTLAS H W GVWIG+TLGM+LADGLAI AG LLHRRLPE+LL V+ LLF FG Sbjct 120 TALATVTLASHHDWVGVWIGSTLGMVLADGLAIAAGRLLHRRLPEKLLHVVASLLFATFG 179 Query 181 LWLLFDDALGFR 192 +W+LFD ALG+R Sbjct 180 VWMLFDSALGWR 191 >gi|240168324|ref|ZP_04746983.1| hypothetical protein MkanA1_03367 [Mycobacterium kansasii ATCC 12478] Length=231 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 165/227 (73%), Positives = 184/227 (82%), Gaps = 5/227 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAATLLSLG VF+AELGDRSQL+TMTY LR+RWWVV+ GVAIA+FTVHGV+VAIGHFLG Sbjct 1 MLAATLLSLGVVFVAELGDRSQLVTMTYALRFRWWVVIAGVAIASFTVHGVSVAIGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 +T+PARP A AIAFL+FAVW WRE A D + + PR AL TVVSSF LAEL DK Sbjct 61 ATLPARPIAFAGAIAFLLFAVWAWREGAAGDDKPA-NPPHPRFALLTVVSSFVLAELSDK 119 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 TTLATVTLASDH W GVW+G+TLGMILADGLAIGAGLLLH+RLPE+LL VL GLLFLLFG Sbjct 120 TTLATVTLASDHDWVGVWVGSTLGMILADGLAIGAGLLLHQRLPEQLLHVLAGLLFLLFG 179 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAA 227 LW+LFD A G+RSVAI VTA A A A + AQT RRR A+A Sbjct 180 LWMLFDGAFGWRSVAIGVTA----AVAIVAAAGVTAQTLRRRRNASA 222 >gi|333992800|ref|YP_004525414.1| hypothetical protein JDM601_4160 [Mycobacterium sp. JDM601] gi|333488768|gb|AEF38160.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=229 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 137/225 (61%), Positives = 167/225 (75%), Gaps = 3/225 (1%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA L+SLG VFLAELGD+SQLITMTY LR+RWWVVL+GVAIAAF VHG++V +GHFLG Sbjct 1 MLAAMLISLGVVFLAELGDKSQLITMTYALRHRWWVVLSGVAIAAFAVHGISVTVGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 T+P RP A V+ +AF+ F VW WRE T++ S + T EPR LF VVSS LAELGDK Sbjct 61 LTLPTRPIAAVAGVAFIGFGVWTWREGTSAASGHT-TVREPRFVLFAVVSSVLLAELGDK 119 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATV LASD +W GVW+G T GM+LAD +AI G +LHR+LPE+LL GLLF +FG Sbjct 120 TMLATVALASDRNWLGVWLGATAGMVLADAVAIAVGTVLHRQLPEQLLHGAAGLLFGVFG 179 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTA 225 LW+L D+ALG+R VA+ A L + +A ++R RRR P A Sbjct 180 LWMLLDEALGWRPVAVGAVAG--LMSVASAGALRRVVMRRREPAA 222 >gi|183985367|ref|YP_001853658.1| hypothetical protein MMAR_5398 [Mycobacterium marinum M] gi|183178693|gb|ACC43803.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length=234 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 171/230 (75%), Positives = 188/230 (82%), Gaps = 8/230 (3%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML+AT+LSLG VFLAELGDRSQLITMTY LRYRWWVVLTGVAIA+ TVHGV+VA+GHFLG Sbjct 1 MLSATMLSLGVVFLAELGDRSQLITMTYALRYRWWVVLTGVAIASVTVHGVSVAVGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWRE---DTASDSETSPTAAEPRLALFTVVSSFALAEL 117 +TVPARP A V AIAFLIFA W WRE D A E + PR AL TVVSSF LAEL Sbjct 61 TTVPARPMAFVGAIAFLIFAGWAWREGREDPAGADEVAHLP-NPRFALLTVVSSFVLAEL 119 Query 118 GDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFL 177 DKTTLATVTLASDH+WAGVWIGTTLGMI+ADGLAIG GLLLH RLPE+LL +L LLFL Sbjct 120 SDKTTLATVTLASDHNWAGVWIGTTLGMIVADGLAIGVGLLLHHRLPEQLLHLLASLLFL 179 Query 178 LFGLWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAA 227 LFGLW+LF+ ALG+RSVAI VTAAV LAAA A + QT RRR +A+A Sbjct 180 LFGLWMLFEGALGWRSVAIGVTAAVALAAAAGATA----QTLRRRRSASA 225 >gi|118620034|ref|YP_908366.1| hypothetical protein MUL_5020 [Mycobacterium ulcerans Agy99] gi|118572144|gb|ABL06895.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length=234 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 170/229 (75%), Positives = 186/229 (82%), Gaps = 6/229 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML+AT+LSLG VFLAELGDRSQLITMTY LRYRWWVVLTGVAIA+ TVHGV+VA+GHFLG Sbjct 1 MLSATMLSLGVVFLAELGDRSQLITMTYALRYRWWVVLTGVAIASVTVHGVSVAVGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAA--EPRLALFTVVSSFALAELG 118 +TVPARP A V AIAFLIFA W WRE + A PR AL TVVSSF LAEL Sbjct 61 TTVPARPMAFVGAIAFLIFAGWAWREGREDPAGADGVAHLPSPRFALLTVVSSFVLAELS 120 Query 119 DKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLL 178 DKTTLATVTLASDH+WAGVWIGTTLGMI+ADGLAIG GLLLH RLPE+LL +L LLFLL Sbjct 121 DKTTLATVTLASDHNWAGVWIGTTLGMIVADGLAIGVGLLLHHRLPEQLLHLLASLLFLL 180 Query 179 FGLWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAA 227 FGLW+LF+ ALG+RSVAI VTAAV LAAA A AQT RRR +A+A Sbjct 181 FGLWMLFEGALGWRSVAIGVTAAVALAAAAGA----TAQTLRRRRSASA 225 >gi|108802009|ref|YP_642206.1| hypothetical protein Mmcs_5046 [Mycobacterium sp. MCS] gi|119871161|ref|YP_941113.1| hypothetical protein Mkms_5134 [Mycobacterium sp. KMS] gi|108772428|gb|ABG11150.1| protein of unknown function UPF0016 [Mycobacterium sp. MCS] gi|119697250|gb|ABL94323.1| protein of unknown function UPF0016 [Mycobacterium sp. KMS] Length=235 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 130/219 (60%), Positives = 158/219 (73%), Gaps = 6/219 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML A L+SL VF+AELGD+SQ+ITMTY LR+RWWVVL+GV IAA VHG++VAIGHFLG Sbjct 1 MLGAVLVSLAVVFVAELGDKSQIITMTYALRHRWWVVLSGVGIAAVLVHGLSVAIGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 T+P +P A +AIAFL+FA W WRE + + AEPR + +VSSF LAELGDK Sbjct 61 LTLPEKPIAFAAAIAFLLFAAWTWREGRNAGGDDDVRVAEPRFVVPAIVSSFVLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATV LASD GVWIG T+GM+LADG+AI G +LH+RLPE L + +LFLLFG Sbjct 121 TMLATVALASDRDAIGVWIGATVGMVLADGVAIVVGAILHKRLPEGFLHAMASVLFLLFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTR 219 LW+LFD ALG+R VA+A T V TAV + +A R Sbjct 181 LWMLFDAALGWRVVALAATGGV------TAVVLLIAVVR 213 >gi|126437988|ref|YP_001073679.1| hypothetical protein Mjls_5425 [Mycobacterium sp. JLS] gi|126237788|gb|ABO01189.1| protein of unknown function UPF0016 [Mycobacterium sp. JLS] Length=235 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/202 (62%), Positives = 151/202 (75%), Gaps = 0/202 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML A L+SL VF+AELGD+SQ+ITMTY LR+RWWVVL+GV IAA VHG++VAIGHFLG Sbjct 1 MLGAVLVSLAVVFVAELGDKSQIITMTYALRHRWWVVLSGVGIAAVLVHGLSVAIGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 T+P +P A +AIAFL+FA W WRE + + AEPR + +VSSF LAELGDK Sbjct 61 LTLPEKPIAFAAAIAFLLFAAWTWREGRNAGGDDDVRVAEPRFVVPAIVSSFVLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATV LASD GVWIG T+GM+LADG+AI G +LH+RLPE L + +LFLLFG Sbjct 121 TMLATVALASDRDPIGVWIGATVGMVLADGVAIVVGAILHKRLPEGFLHAMASVLFLLFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAV 202 LW+LFD ALG+R VA+A T V Sbjct 181 LWMLFDAALGWRVVALAATGGV 202 >gi|229492838|ref|ZP_04386636.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229320278|gb|EEN86101.1| putative membrane protein [Rhodococcus erythropolis SK121] Length=237 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 110/236 (47%), Positives = 147/236 (63%), Gaps = 1/236 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA LLS G +F+AELGD+SQL+ MT+ LRYRWWVVL G+ +A VH V+VA+GH+LG Sbjct 1 MLAAILLSFGVIFVAELGDKSQLMAMTFALRYRWWVVLGGITVATTLVHLVSVAVGHYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 +P + V IAFLIF +W R D +D E + R A V S+F LAELGDK Sbjct 61 VALPTAAISIVGGIAFLIFGLWTLRGDDLTDDEQNKAGRVTRSAFIAVASAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+D+ W GVWIG+T+GM+ AD LAI G +L + LP+ +++ +LF +FG Sbjct 121 TMLATITLATDNDWIGVWIGSTVGMVAADALAIIVGSVLGKHLPDGFIKIGAAVLFFVFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRP 236 +WLL + S I + VVLA + R+ R R +A DD+ P Sbjct 181 VWLLLEGIFPDSSAGI-IGGCVVLAVSVLGALARMIWKRSRATDSATHLVDDNRTP 235 >gi|226303647|ref|YP_002763605.1| hypothetical protein RER_01580 [Rhodococcus erythropolis PR4] gi|226182762|dbj|BAH30866.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=237 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 109/236 (47%), Positives = 146/236 (62%), Gaps = 1/236 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA LLS G +F+AELGD+SQL+ MT+ LRYRWWVVL G+ +A VH V+VA+GH+LG Sbjct 1 MLAAILLSFGVIFVAELGDKSQLMAMTFALRYRWWVVLGGITVATTLVHLVSVAVGHYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 +P + V IAFLIF +W R D +D E + R A V S+F LAELGDK Sbjct 61 VALPTAAISIVGGIAFLIFGLWTLRGDDLTDDEQNKAGRVTRSAFIAVASAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+D+ W GVWIG+T+GM+ AD LAI G +L + LP+ +++ +LF +FG Sbjct 121 TMLATITLATDNDWIGVWIGSTVGMVAADALAIIVGSVLGKHLPDGFIKIGAAVLFFVFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRP 236 +WLL + S I + VVLA + R+ R R + DD+ P Sbjct 181 VWLLLEGIFPDSSAGI-IGGGVVLAVSVLGALARMIWKRSRATDSDTHLVDDNRTP 235 >gi|315443069|ref|YP_004075948.1| hypothetical protein Mspyr1_14400 [Mycobacterium sp. Spyr1] gi|315261372|gb|ADT98113.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=251 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 111/244 (46%), Positives = 151/244 (62%), Gaps = 6/244 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA LLS +F+AELGD++QL+ M + LRYRWWVVL+ + +A VH ++VAIGH+LG Sbjct 1 MLAALLLSFAVIFVAELGDKTQLVAMMFALRYRWWVVLSAITVATTAVHVLSVAIGHYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P ++ F+ F +W R D+ SD E S A F V S+F LAELGDK Sbjct 61 AALPTHLLGLIAGAMFIFFGLWTLRGDSLSDEEASRAEKATAPAFFVVTSAFVLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATVTLASD+ W GVWIG+TLGM+ ADGLAI G +L RRLPER++Q+ LFLLFG Sbjct 121 TMLATVTLASDNDWLGVWIGSTLGMVAADGLAIIVGAVLGRRLPERVIQIAAAALFLLFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPT----AAATPEDDSTRP 236 ++L ++ F S+ A+ + L + + A R RP A A +D + Sbjct 181 AYMLLENI--FPSLPFALVGGIALTIVAASGAAVWALPERLRPAVLRPAPAAEQDGTAST 238 Query 237 ERSS 240 + +S Sbjct 239 DTAS 242 >gi|145222604|ref|YP_001133282.1| hypothetical protein Mflv_2016 [Mycobacterium gilvum PYR-GCK] gi|145215090|gb|ABP44494.1| protein of unknown function UPF0016 [Mycobacterium gilvum PYR-GCK] Length=256 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 107/223 (48%), Positives = 143/223 (65%), Gaps = 2/223 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA LLS +F+AELGD++QL+ M + LRYRWWVVL+ + +A VH ++VAIGH+LG Sbjct 1 MLAALLLSFAVIFVAELGDKTQLVAMMFALRYRWWVVLSAITVATTAVHVLSVAIGHYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P ++ F+ F +W R D+ SD E S A F V S+F LAELGDK Sbjct 61 AALPTHLLGLIAGAMFIFFGLWTLRGDSLSDEEASRAEKATAPAFFVVTSAFVLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATVTLASD+ W GVWIG+TLGM+ ADGLAI G +L RRLPER++Q+ LFLLFG Sbjct 121 TMLATVTLASDNDWLGVWIGSTLGMVAADGLAIIVGAVLGRRLPERVIQIAAAALFLLFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRP 223 ++L ++ F S+ A+ + L + + A R RP Sbjct 181 AYMLLENI--FPSLPFALVGGIALTIVAASGAAVWALPERLRP 221 >gi|118471238|ref|YP_889575.1| hypothetical protein MSMEG_5329 [Mycobacterium smegmatis str. MC2 155] gi|118172525|gb|ABK73421.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=246 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/242 (46%), Positives = 155/242 (65%), Gaps = 7/242 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA LS G +F+AELGD+SQL+ MT+ LRYRWWVVL G+ +A VH ++VA+GH+LG Sbjct 1 MLAALALSFGVIFIAELGDKSQLMAMTFALRYRWWVVLGGITLATTAVHLISVAVGHYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P V+ +AF+ F +W R D S+ E + A F V S+F LAELGDK Sbjct 61 AALPTHLLGIVAGVAFVFFGLWTLRGDRLSEDEATRAQRTSAPAFFAVTSAFLLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+D+ W GVWIG+T+GM+ AD LAI G + + LPER++Q+ +LFL FG Sbjct 121 TMLATITLAADNDWVGVWIGSTIGMVAADALAIVVGAIAGKHLPERMIQIAAAVLFLGFG 180 Query 181 LWLLFDD-----ALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTR 235 ++L ++ AL + ++ + AA LAA A+ R+ RR +AAA E+D+ Sbjct 181 FFMLLENIWHAPALLLVAASLGIVAA--LAAMVFALPERLRPQVLRRSSAAADTEEDTGL 238 Query 236 PE 237 E Sbjct 239 RE 240 >gi|120405660|ref|YP_955489.1| hypothetical protein Mvan_4708 [Mycobacterium vanbaalenii PYR-1] gi|119958478|gb|ABM15483.1| protein of unknown function UPF0016 [Mycobacterium vanbaalenii PYR-1] Length=261 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 110/243 (46%), Positives = 149/243 (62%), Gaps = 6/243 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA LLS +F+AELGD++QL+ M + LRYRWWVVL+ + A VH ++VAIG++LG Sbjct 1 MLAALLLSFAVIFVAELGDKTQLVAMMFALRYRWWVVLSAITAATAVVHVLSVAIGYYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P ++ F+ F +W R D+ +D ETS A A F V S+F LAELGDK Sbjct 61 AALPTHLLGFIAGAMFIFFGLWTLRGDSLTDEETSRAAKATAPAFFVVTSAFVLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATVTLA+D W GVWIG+TLGM+ ADGLAI G + + LPERL+Q+ LFLLFG Sbjct 121 TMLATVTLAADRDWLGVWIGSTLGMVAADGLAILVGAVAGKHLPERLIQISAAALFLLFG 180 Query 181 LWLLFDDAL----GFRSVAIAVTAAVVLAAATTAVSVRV--AQTRRRRPTAAATPEDDST 234 +++FD+ L A+T ++L A+ R+ A R P+A E D Sbjct 181 FYMVFDNLLPTAPTAAVAGAALTLVLILGGVMRALPDRLRPAVLRPSAPSAVDIAERDEC 240 Query 235 RPE 237 P+ Sbjct 241 SPD 243 >gi|312137652|ref|YP_004004988.1| integral membrane protein [Rhodococcus equi 103S] gi|325677550|ref|ZP_08157213.1| protein of hypothetical function UPF0016 [Rhodococcus equi ATCC 33707] gi|311886991|emb|CBH46300.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325551621|gb|EGD21320.1| protein of hypothetical function UPF0016 [Rhodococcus equi ATCC 33707] Length=235 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 97/186 (53%), Positives = 128/186 (69%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 MLAA LLS G +F+AELGD+SQL+ MT+ LRYRWWVV+ G+ +A VH V+V +GHFLG Sbjct 1 MLAAMLLSFGVIFVAELGDKSQLMAMTFALRYRWWVVIAGITVATTVVHLVSVGVGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P + V IAF+IF +W R D+ SD E S A V S+F LAELGDK Sbjct 61 AALPTTAISIVGGIAFVIFGLWTLRGDSLSDDEESKAGKVTGSAFLAVASAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATVTLA+D+ W GVWIG+T+GM+ AD LAI G +L + LPE ++++ +LF FG Sbjct 121 TMLATVTLAADNDWVGVWIGSTVGMVAADALAIVVGAVLGKHLPEAVVRIGAAVLFFAFG 180 Query 181 LWLLFD 186 WL+ + Sbjct 181 AWLVLE 186 >gi|262200188|ref|YP_003271396.1| hypothetical protein Gbro_0155 [Gordonia bronchialis DSM 43247] gi|262083535|gb|ACY19503.1| protein of unknown function UPF0016 [Gordonia bronchialis DSM 43247] Length=238 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 109/238 (46%), Positives = 146/238 (62%), Gaps = 5/238 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 M+AA LLS G +F+AELGD+SQL+ MTY LRYRWWVVL + +A VH V+V GHFLG Sbjct 1 MIAALLLSFGVIFVAELGDKSQLMAMTYALRYRWWVVLGAITVATTAVHAVSVFFGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 ++PA + + +A LIF +W R D D E++ F V+S+F LAELGDK Sbjct 61 LSIPANLMSIFAGLAMLIFGLWTLRGDRLDDDESTKANRVGASVFFAVMSAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TL++ H+W GVWIG+TLGM+ AD LAI G LL + LPER + + +LF F Sbjct 121 TMLATITLSTGHNWLGVWIGSTLGMVAADALAIAIGALLGKHLPERTIAIGAAVLFFGFA 180 Query 181 LWLLFDDALG--FRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDSTRP 236 WLL + +G +V ++AAV++ T SV V + R A + D RP Sbjct 181 AWLLAEGLVGSTMPTVVATISAAVLI---TGLGSVYVWRVHRTAAEHAEHTDTDDPRP 235 >gi|111020988|ref|YP_703960.1| hypothetical protein RHA1_ro04005 [Rhodococcus jostii RHA1] gi|110820518|gb|ABG95802.1| possible membrane protein [Rhodococcus jostii RHA1] Length=234 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/231 (49%), Positives = 144/231 (63%), Gaps = 2/231 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML A LLS G +F+AELGD+SQL+ MT+ LRYRWWVV+ G+ +A VH V+VA+GH+LG Sbjct 1 MLTAALLSFGVIFVAELGDKSQLMAMTFALRYRWWVVIAGITVATTVVHLVSVAVGHYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 +P + V AFLIF W R D S+ E R A V S+F LAELGDK Sbjct 61 VALPTAAISIVGGAAFLIFGAWTLRGDDLSEDEQLKAGRATRSAFLAVTSAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+DH GVWIG+T+GM+ AD LAI G +L + LPE ++++ +LF FG Sbjct 121 TMLATITLATDHDTIGVWIGSTVGMVAADALAIVVGAVLGKHLPESVIRIGAAVLFFAFG 180 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPED 231 +WLL + L +VA + A V+ A + R RRRR AAA PE Sbjct 181 IWLLLEGLLP-GNVAGPIAGAAVVVLALAGAAGRAVWLRRRRG-AAAEPEQ 229 >gi|326384363|ref|ZP_08206044.1| hypothetical protein SCNU_15569 [Gordonia neofelifaecis NRRL B-59395] gi|326196961|gb|EGD54154.1| hypothetical protein SCNU_15569 [Gordonia neofelifaecis NRRL B-59395] Length=239 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 108/235 (46%), Positives = 144/235 (62%), Gaps = 5/235 (2%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 M AA +LSLG +F+AELGD+SQL+ MTY LRYRWWVVL+ + A VH +V GHFLG Sbjct 1 MFAALMLSLGIIFVAELGDKSQLMAMTYALRYRWWVVLSAILTATTLVHAASVFFGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 ++PA + ++ ++ L+F +W R D D E++ V+SSF LAELGDK Sbjct 61 LSIPADLMSVLAGLSMLVFGLWTLRGDELDDEESARAGRVGASVFLAVMSSFMLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA++H W GVWIG+T+GM+ AD LAI G LL + LPER + + +LF F Sbjct 121 TMLATITLATNHDWVGVWIGSTIGMVAADALAIAVGRLLGKHLPERSIAIGAAVLFFAFA 180 Query 181 LWLLFDDALGFRSVAIAVT--AAVVLAAATTAVSVRVAQTRRRRPTAAATPEDDS 233 +WLL + V +A T AV++ AA T + T RRR AA DD Sbjct 181 VWLLIEGLSDASPVLVATTVPVAVLITAAGT---FWIRATHRRRGEAALDIGDDD 232 >gi|226363293|ref|YP_002781075.1| hypothetical protein ROP_38830 [Rhodococcus opacus B4] gi|226241782|dbj|BAH52130.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=233 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 97/189 (52%), Positives = 126/189 (67%), Gaps = 0/189 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML A LLS G +F+AELGD+SQL+ MT+ LRYRWWVV+ G+ +A VH V+VA+GH+LG Sbjct 1 MLTAALLSFGVIFVAELGDKSQLMAMTFALRYRWWVVIAGITVATTVVHLVSVAVGHYLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 +P + V +AFLIF W R D S+ E R A V S+F LAELGDK Sbjct 61 VALPTAAISIVGGLAFLIFGAWTLRGDNLSEDEQLKAGRAARSAFLAVTSAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+DH GVWIG+T+GM+ AD LAI G +L + LPE +++V +LF FG Sbjct 121 TMLATITLATDHDTIGVWIGSTVGMVAADALAIVVGAVLGKHLPESVIRVGAAVLFFAFG 180 Query 181 LWLLFDDAL 189 +WLL + L Sbjct 181 VWLLLEGLL 189 >gi|54022080|ref|YP_116322.1| hypothetical protein nfa1160 [Nocardia farcinica IFM 10152] gi|54013588|dbj|BAD54958.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=238 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 98/181 (55%), Positives = 128/181 (71%), Gaps = 1/181 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 M+ LS+G VFLAELGD+SQL+ +T+ LRYRWWVVL G+A A+ VH ++VA+GHFLG Sbjct 1 MITTIALSIGIVFLAELGDKSQLMALTFALRYRWWVVLGGIATASAGVHILSVAVGHFLG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVV-SSFALAELGD 119 + +P R A V+A+ FL +W RE E +P A A F VV S+F LAELGD Sbjct 61 AALPTRAIALVAALTFLAVGLWTLREHLVGGEEDAPPAPRSSRAPFLVVLSAFLLAELGD 120 Query 120 KTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLF 179 +T AT LA+D+HW GVWIG+T+GM+ ADGLAI G+LL + LPE ++ + +GLLFLLF Sbjct 121 RTMFATAALATDNHWFGVWIGSTVGMVAADGLAIALGILLGKHLPEHIIGIASGLLFLLF 180 Query 180 G 180 G Sbjct 181 G 181 >gi|343926292|ref|ZP_08765801.1| hypothetical protein GOALK_056_01600 [Gordonia alkanivorans NBRC 16433] gi|343763921|dbj|GAA12727.1| hypothetical protein GOALK_056_01600 [Gordonia alkanivorans NBRC 16433] Length=230 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/221 (46%), Positives = 135/221 (62%), Gaps = 2/221 (0%) Query 12 VFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARPAACV 71 +F+AELGD+SQL+ MTY LRYRWWVVL + +A VH V+V GHFLG ++P + + Sbjct 2 IFVAELGDKSQLMAMTYALRYRWWVVLLAITVATTAVHAVSVFFGHFLGMSLPTDLMSVL 61 Query 72 SAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATVTLASD 131 + +A L+F +W D D E + V+S+F LAELGDKT LAT+TLA+D Sbjct 62 AGLAMLVFGLWTIYGDRLDDEEQNRATRVGASVFLAVMSAFFLAELGDKTMLATITLATD 121 Query 132 HHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFGLWLLFDDALGF 191 H W GVWIG+T+GM+ AD LAIG G+LL + LPER++ + +LF F +WL G Sbjct 122 HDWLGVWIGSTVGMVAADALAIGVGVLLGKHLPERVIAIGAAVLFFGFAVWLTVTGLTGA 181 Query 192 RS--VAIAVTAAVVLAAATTAVSVRVAQTRRRRPTAAATPE 230 + +A VTA VV+ T + R + R T AA PE Sbjct 182 STPMIAATVTAIVVIIGVGTFLIHRDRRLRADSDTEAAVPE 222 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 40/75 (54%), Gaps = 0/75 (0%) Query 9 LGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARPA 68 + A FLAELGD++ L T+T + W V G + +A+ +G LG +P R Sbjct 99 MSAFFLAELGDKTMLATITLATDHDWLGVWIGSTVGMVAADALAIGVGVLLGKHLPERVI 158 Query 69 ACVSAIAFLIFAVWV 83 A +A+ F FAVW+ Sbjct 159 AIGAAVLFFGFAVWL 173 >gi|296137875|ref|YP_003645118.1| hypothetical protein Tpau_0125 [Tsukamurella paurometabola DSM 20162] gi|296026009|gb|ADG76779.1| protein of unknown function UPF0016 [Tsukamurella paurometabola DSM 20162] Length=235 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 88/186 (48%), Positives = 124/186 (67%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML A L+S VF+AELGD+SQL+ MT+ +++WW+VL G+ ++ VH +V IG+ LG Sbjct 1 MLNALLVSFAVVFVAELGDKSQLMAMTFAAKFKWWIVLAGITVSTAVVHIASVGIGYALG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 S++P + ++ I+ L+FA W WR D SD E++ R V S+F LAELGDK Sbjct 61 SSIPTQLITAIAGISMLVFAFWTWRGDALSDDESTTADRVTRSVFLAVTSAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATVTL + ++W GVW+G+T+GM+ AD LAI G +L RLPER + + +LF FG Sbjct 121 TMLATVTLTTQYNWFGVWLGSTVGMVAADALAIAVGAVLGSRLPERAVAIGATILFFGFG 180 Query 181 LWLLFD 186 WLLF+ Sbjct 181 GWLLFE 186 >gi|291007580|ref|ZP_06565553.1| hypothetical protein SeryN2_23899 [Saccharopolyspora erythraea NRRL 2338] Length=192 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 92/186 (50%), Positives = 119/186 (64%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 ML +S A+F+AELGD+SQL+ MT+ RYR W VL G+ +A VH V+V +G +G Sbjct 1 MLTGFAVSSAAIFVAELGDKSQLMAMTFATRYRAWQVLLGITLATTVVHAVSVLLGFGMG 60 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 S +P V+ +AFL FA W R D ++ E S A+ V +F LAELGDK Sbjct 61 SALPTDWIGLVAGLAFLGFAAWTLRGDHLTEKEKSKAGRLAGSAVLAVTVAFFLAELGDK 120 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LATVTLA+ H W G WIG+T+GM+LAD LAIG GL+L + LPERL++ LF +FG Sbjct 121 TMLATVTLAAQHDWLGTWIGSTIGMVLADALAIGVGLMLGKHLPERLIRYGAATLFAVFG 180 Query 181 LWLLFD 186 LWL D Sbjct 181 LWLTVD 186 >gi|134098141|ref|YP_001103802.1| hypothetical protein SACE_1555 [Saccharopolyspora erythraea NRRL 2338] gi|133910764|emb|CAM00877.1| possible membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=186 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 90/180 (50%), Positives = 117/180 (65%), Gaps = 0/180 (0%) Query 7 LSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPAR 66 +S A+F+AELGD+SQL+ MT+ RYR W VL G+ +A VH V+V +G +GS +P Sbjct 1 MSSAAIFVAELGDKSQLMAMTFATRYRAWQVLLGITLATTVVHAVSVLLGFGMGSALPTD 60 Query 67 PAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATV 126 V+ +AFL FA W R D ++ E S A+ V +F LAELGDKT LATV Sbjct 61 WIGLVAGLAFLGFAAWTLRGDHLTEKEKSKAGRLAGSAVLAVTVAFFLAELGDKTMLATV 120 Query 127 TLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFGLWLLFD 186 TLA+ H W G WIG+T+GM+LAD LAIG GL+L + LPERL++ LF +FGLWL D Sbjct 121 TLAAQHDWLGTWIGSTIGMVLADALAIGVGLMLGKHLPERLIRYGAATLFAVFGLWLTVD 180 >gi|256376574|ref|YP_003100234.1| hypothetical protein Amir_2448 [Actinosynnema mirum DSM 43827] gi|255920877|gb|ACU36388.1| protein of unknown function UPF0016 [Actinosynnema mirum DSM 43827] Length=196 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 86/182 (48%), Positives = 119/182 (66%), Gaps = 0/182 (0%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 L +T +S G +F+AELGD+SQL+ +T+ R++ W VL G+ +A VH +VAIG LG+ Sbjct 5 LVSTAVSFGVIFVAELGDKSQLMALTFATRFKVWPVLLGITLATAIVHLASVAIGFGLGA 64 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKT 121 +P +AIAF++F W R D+ +D E S R A+ V ++F LAELGDKT Sbjct 65 ALPTGWINLAAAIAFVVFGFWTLRGDSLTDDEKSKAQNVTRSAVIAVGTAFFLAELGDKT 124 Query 122 TLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFGL 181 LAT+TLA+DH W GVW+G+TLGM+ AD LAI G L + LPE+ ++ LF LFG+ Sbjct 125 MLATITLATDHGWFGVWVGSTLGMVAADALAIVVGRALGKALPEKTIRYGASALFFLFGI 184 Query 182 WL 183 WL Sbjct 185 WL 186 >gi|331695445|ref|YP_004331684.1| hypothetical protein Psed_1594 [Pseudonocardia dioxanivorans CB1190] gi|326950134|gb|AEA23831.1| protein of unknown function UPF0016 [Pseudonocardia dioxanivorans CB1190] Length=407 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/186 (48%), Positives = 120/186 (65%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 +L A LS G +F+AELGD+SQL+ +T+ R+R VL G+ IA VH V+VA+GH LG Sbjct 4 VLVAAALSFGVIFVAELGDKSQLMALTFATRHRAVPVLVGITIATSVVHLVSVAVGHGLG 63 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P A ++A+AFL F W R D + E + R A+ ++F LAELGDK Sbjct 64 AALPTGWIALIAAVAFLGFGAWTLRGDALTAEEHAKATRVTRSAVVAASTAFFLAELGDK 123 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+ H W GVW+G+TLGM++AD +AI G L RRLPER ++ LF LFG Sbjct 124 TMLATITLATQHGWFGVWLGSTLGMVVADAIAIVIGRQLGRRLPERTIRYGAAGLFGLFG 183 Query 181 LWLLFD 186 +WL D Sbjct 184 IWLAVD 189 >gi|238059348|ref|ZP_04604057.1| hypothetical protein MCAG_00314 [Micromonospora sp. ATCC 39149] gi|237881159|gb|EEP69987.1| hypothetical protein MCAG_00314 [Micromonospora sp. ATCC 39149] Length=195 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 83/186 (45%), Positives = 119/186 (64%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 L A ++S G +F+AELGD+SQL+ +T+ R++ VL G+ +A VH +VAIGH LG Sbjct 4 FLVALVVSFGVIFVAELGDKSQLMALTFATRFKTIPVLIGITVATSVVHLASVAIGHGLG 63 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P + ++ +AFL F VW R D ++ E R A+ V +F LAELGDK Sbjct 64 AALPTGWISLIAGLAFLGFGVWTLRGDKLTEEEKRKAERSSRSAVVAVGVAFFLAELGDK 123 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+ + W G W+G+TLGM+ AD LAI G +L R LPER ++ +LF + G Sbjct 124 TMLATITLATKYGWFGTWLGSTLGMVAADALAIAVGRMLGRHLPERTIRYGAAILFAVCG 183 Query 181 LWLLFD 186 LWL+F+ Sbjct 184 LWLIFE 189 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/80 (34%), Positives = 41/80 (52%), Gaps = 0/80 (0%) Query 11 AVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARPAAC 70 A FLAELGD++ L T+T +Y W+ G + +A+A+G LG +P R Sbjct 114 AFFLAELGDKTMLATITLATKYGWFGTWLGSTLGMVAADALAIAVGRMLGRHLPERTIRY 173 Query 71 VSAIAFLIFAVWVWREDTAS 90 +AI F + +W+ E A Sbjct 174 GAAILFAVCGLWLIFEAVAE 193 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 34/90 (38%), Positives = 47/90 (53%), Gaps = 7/90 (7%) Query 105 LFTVVSSFAL---AELGDKTTLATVTLASDHHWAGVWIGTTLG--MILADGLAIGAGLLL 159 L +V SF + AELGDK+ L +T A+ V IG T+ ++ +AIG GL Sbjct 5 LVALVVSFGVIFVAELGDKSQLMALTFATRFKTIPVLIGITVATSVVHLASVAIGHGL-- 62 Query 160 HRRLPERLLQVLTGLLFLLFGLWLLFDDAL 189 LP + ++ GL FL FG+W L D L Sbjct 63 GAALPTGWISLIAGLAFLGFGVWTLRGDKL 92 >gi|325002912|ref|ZP_08124024.1| hypothetical protein PseP1_29295 [Pseudonocardia sp. P1] Length=438 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 81/184 (45%), Positives = 118/184 (65%), Gaps = 0/184 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 LAA +S G +F+AELGD+SQL+ +T+ R++ VL G+ IA H V+VA+G+ LG Sbjct 6 FLAAFAVSFGVIFVAELGDKSQLMALTFATRFKAIPVLVGITIATSVTHLVSVAVGYGLG 65 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 +++P A V+++AF+ F W R D+ +D E A+ +F LAELGDK Sbjct 66 ASIPTGWIALVASVAFVAFGAWTLRGDSLTDDEEQKAKRAGGSAVVAASVAFFLAELGDK 125 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+ + W GVW+G+TLGM+ AD LAI G L ++LPER++ V ++F +FG Sbjct 126 TMLATITLATQYSWFGVWLGSTLGMVAADALAIVVGRKLGQKLPERVISVGAAIMFFVFG 185 Query 181 LWLL 184 WL Sbjct 186 AWLF 189 >gi|271962311|ref|YP_003336507.1| hypothetical protein Sros_0745 [Streptosporangium roseum DSM 43021] gi|270505486|gb|ACZ83764.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length=189 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 79/180 (44%), Positives = 113/180 (63%), Gaps = 0/180 (0%) Query 7 LSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPAR 66 +SL +F+AELGD+SQL+ MT+ R++ W VL G+ +A VH V+V +G G +P Sbjct 6 ISLAVIFVAELGDKSQLMAMTFATRFKPWPVLAGITLATAVVHLVSVGLGRLAGDLIPTT 65 Query 67 PAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATV 126 ++ IAFL FAVW R D +D E+ R A+ V +F LAELGDKT LAT+ Sbjct 66 AITVIAGIAFLGFAVWTLRGDELTDEESQKAQRTTRSAIIAVTVAFFLAELGDKTMLATI 125 Query 127 TLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFGLWLLFD 186 TLA+ H W G W+G+T+GM+ AD LAI G +L + LPE++++ F +FG+ LL + Sbjct 126 TLATQHGWFGTWLGSTVGMVAADALAIAVGRMLGKHLPEKIIRYGAAAAFAIFGVVLLVE 185 >gi|159037857|ref|YP_001537110.1| hypothetical protein Sare_2260 [Salinispora arenicola CNS-205] gi|157916692|gb|ABV98119.1| protein of unknown function UPF0016 [Salinispora arenicola CNS-205] Length=195 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/186 (46%), Positives = 116/186 (63%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 L A ++S G +F+AELGD+SQL+ +T+ R+R VL G+ +A VH V+VA+G+ LG Sbjct 4 FLVALVVSFGVIFVAELGDKSQLMALTFATRFRPLPVLVGITVATAVVHLVSVAVGYGLG 63 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P A + AFL F W R D +D E R A+ V +F LAELGDK Sbjct 64 AALPTEWIALFAGAAFLGFGAWTLRGDRLTDEERRKADRSGRPAVLLVGVAFLLAELGDK 123 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+ + W G W+G+TLGM+ AD LAI G LL R+LPER ++ +LF G Sbjct 124 TMLATITLATQYGWFGTWVGSTLGMVAADALAILVGRLLGRKLPERTVRYGAAVLFAGCG 183 Query 181 LWLLFD 186 LWL+ D Sbjct 184 LWLILD 189 >gi|330468665|ref|YP_004406408.1| hypothetical protein VAB18032_23550 [Verrucosispora maris AB-18-032] gi|328811636|gb|AEB45808.1| hypothetical protein VAB18032_23550 [Verrucosispora maris AB-18-032] Length=195 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 118/186 (64%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 L A +S G +F+AELGD+SQL+ + + RYR +L G+ +A VH +VAIG+ LG Sbjct 4 FLVALAVSFGVIFVAELGDKSQLMALAFATRYRTMPILIGITVATAVVHLASVAIGYGLG 63 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 S +P + ++ AF+ F +W R D+ ++ + A + A+ TV +F LAELGDK Sbjct 64 SALPTGWISLLAGAAFIGFGLWTLRGDSLTEEDKRKAARGGKSAVLTVGVAFFLAELGDK 123 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+ + W G W+G+T+GM+ AD LAI G LL R+LPER ++ LF + G Sbjct 124 TMLATITLATQYGWFGTWVGSTVGMVAADALAIIVGRLLGRKLPERTIKYGAAALFAISG 183 Query 181 LWLLFD 186 +WL+ D Sbjct 184 IWLIID 189 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 25/76 (33%), Positives = 39/76 (52%), Gaps = 0/76 (0%) Query 114 LAELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTG 173 +AELGDK+ L + A+ + + IG T+ + ++ G L LP + +L G Sbjct 17 VAELGDKSQLMALAFATRYRTMPILIGITVATAVVHLASVAIGYGLGSALPTGWISLLAG 76 Query 174 LLFLLFGLWLLFDDAL 189 F+ FGLW L D+L Sbjct 77 AAFIGFGLWTLRGDSL 92 >gi|302867874|ref|YP_003836511.1| hypothetical protein Micau_3407 [Micromonospora aurantiaca ATCC 27029] gi|315505724|ref|YP_004084611.1| hypothetical protein ML5_4987 [Micromonospora sp. L5] gi|302570733|gb|ADL46935.1| protein of unknown function UPF0016 [Micromonospora aurantiaca ATCC 27029] gi|315412343|gb|ADU10460.1| protein of unknown function UPF0016 [Micromonospora sp. L5] Length=195 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/186 (44%), Positives = 117/186 (63%), Gaps = 0/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 L A ++S G +F+AELGD+SQL+ +T+ R++ VL G+ IA VH +VAIG+ L Sbjct 4 FLVALVVSFGVIFVAELGDKSQLMALTFATRFKPVPVLIGITIATAVVHLASVAIGYGLN 63 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P + ++ +AFL F W R D ++ E R A+ V +F LAELGDK Sbjct 64 AALPTDWISLIAGLAFLGFGAWTLRGDRLTEEEKRKAERGGRSAVIAVGVAFFLAELGDK 123 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+ + W G W+G+TLGM+ AD LAI G +L R LPER ++ +LF + G Sbjct 124 TMLATITLATKYGWFGTWLGSTLGMVAADALAILVGRMLGRHLPERTIRYGAAVLFAICG 183 Query 181 LWLLFD 186 LWL+F+ Sbjct 184 LWLIFE 189 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/114 (36%), Positives = 53/114 (47%), Gaps = 13/114 (11%) Query 105 LFTVVSSFAL---AELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHR 161 L +V SF + AELGDK+ L +T A+ V IG T+ + ++ G L+ Sbjct 5 LVALVVSFGVIFVAELGDKSQLMALTFATRFKPVPVLIGITIATAVVHLASVAIGYGLNA 64 Query 162 RLPERLLQVLTGLLFLLFGLWLLFDDAL----------GFRSVAIAVTAAVVLA 205 LP + ++ GL FL FG W L D L G RS IAV A LA Sbjct 65 ALPTDWISLIAGLAFLGFGAWTLRGDRLTEEEKRKAERGGRSAVIAVGVAFFLA 118 >gi|326328990|ref|ZP_08195320.1| putative membrane protein [Nocardioidaceae bacterium Broad-1] gi|325953249|gb|EGD45259.1| putative membrane protein [Nocardioidaceae bacterium Broad-1] Length=192 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/187 (44%), Positives = 112/187 (60%), Gaps = 2/187 (1%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LLS +F+AELGD+SQL+ MT+ RYR V+ G+ A VH +VAIG +G Sbjct 1 MYAFLLSTAVIFVAELGDKSQLMAMTFATRYRARDVILGITAATAIVHLASVAIGALIGD 60 Query 62 TVPARP--AACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGD 119 V+ +AFL+FA W R D ++ E +A+ V +F LAELGD Sbjct 61 AFAEHQHYITIVAGLAFLVFAAWTLRGDELTEDEAKKARNSRGMAIIAVGIAFFLAELGD 120 Query 120 KTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLF 179 KT LAT+TLA+ W G WIG+T+GM+ AD LAIG G LL R LPE++++ LF +F Sbjct 121 KTMLATITLATQEGWLGTWIGSTVGMVAADALAIGVGALLGRNLPEKVIKYGAAALFAIF 180 Query 180 GLWLLFD 186 G+ L+ D Sbjct 181 GIILVLD 187 >gi|84495150|ref|ZP_00994269.1| hypothetical protein JNB_10129 [Janibacter sp. HTCC2649] gi|84384643|gb|EAQ00523.1| hypothetical protein JNB_10129 [Janibacter sp. HTCC2649] Length=229 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 79/187 (43%), Positives = 113/187 (61%), Gaps = 2/187 (1%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LLS +F+AELGD+SQL+ MT+ RY VL G+ +A VH +V IG +G+ Sbjct 38 MYAFLLSTAVIFVAELGDKSQLMAMTFATRYTVRQVLIGITVATAIVHLASVGIGRLVGA 97 Query 62 TVPARP--AACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGD 119 V+ +AFL FA W R D +D E + A+ V +F LAELGD Sbjct 98 QFADSQWIINIVAGVAFLAFAAWTLRGDELTDDEAAKAGRSKGAAIVAVGVAFFLAELGD 157 Query 120 KTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLF 179 KT LAT+TLA+ W G W+G+TLGM+LAD LAI G +L ++LPER++++ + F++F Sbjct 158 KTMLATITLATKESWFGTWVGSTLGMVLADALAIAVGAMLGKKLPERVIKIGATVAFVVF 217 Query 180 GLWLLFD 186 G+ L+ Sbjct 218 GIVLIIQ 224 >gi|145594649|ref|YP_001158946.1| hypothetical protein Strop_2117 [Salinispora tropica CNB-440] gi|145303986|gb|ABP54568.1| protein of unknown function UPF0016 [Salinispora tropica CNB-440] Length=194 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/186 (46%), Positives = 115/186 (62%), Gaps = 1/186 (0%) Query 1 MLAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLG 60 L A +S G +F+AELGD+SQL+ +T+ R R VL G+ +A VH +VAIG+ LG Sbjct 4 FLVALGVSFGVIFVAELGDKSQLMALTFATRLRPLPVLIGITVATAVVHLASVAIGYGLG 63 Query 61 STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120 + +P A ++ +AFL F W R D ++ E R A+ V+ F LAELGDK Sbjct 64 AALPTGWIALLAGVAFLGFGAWALRGDRLTEQERRKADRSGRPAVVVGVA-FLLAELGDK 122 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T LAT+TLA+ + W G W+G+TLGM+ AD LAI G +L RRLPER ++ LLF G Sbjct 123 TMLATITLATQYGWFGTWVGSTLGMVAADALAIVVGRVLGRRLPERTVRFGAALLFAGCG 182 Query 181 LWLLFD 186 LWL+ D Sbjct 183 LWLILD 188 >gi|189346754|ref|YP_001943283.1| hypothetical protein Clim_1237 [Chlorobium limicola DSM 245] gi|189340901|gb|ACD90304.1| protein of unknown function UPF0016 [Chlorobium limicola DSM 245] Length=218 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/180 (46%), Positives = 114/180 (64%), Gaps = 4/180 (2%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LSL +FLAELGD++QL+ +T Y VL G+ A VH + AIG FLG+ Sbjct 1 MDAFWLSLVMIFLAELGDKTQLVALTLATCYNTKSVLWGIFWATLAVHIFSAAIGWFLGA 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETS-PTAAEPRLALFTVVSSFALAELGDK 120 +PA ++ IAF+IF W R D D E S T P +FT +F +AELGDK Sbjct 61 KLPADWIGFIAGIAFVIFGFWTLRGDQLDDDEKSCKTTIHPFWLVFT---TFFMAELGDK 117 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T L+T+TLA+++ + VWIG+T+GM+L+DGLAI AG +L +RLPE+ +Q ++F LFG Sbjct 118 TMLSTITLATNNAFLPVWIGSTIGMVLSDGLAIVAGKMLGKRLPEKTIQTGAAIIFFLFG 177 >gi|296268351|ref|YP_003650983.1| hypothetical protein Tbis_0360 [Thermobispora bispora DSM 43833] gi|296091138|gb|ADG87090.1| protein of unknown function UPF0016 [Thermobispora bispora DSM 43833] Length=185 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 76/162 (47%), Positives = 103/162 (64%), Gaps = 0/162 (0%) Query 8 SLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARP 67 SL +F+AELGD+SQL+ MT+ R+R VLTG+ +A VH V+V G +G +P Sbjct 7 SLAVIFVAELGDKSQLMAMTFATRFRALTVLTGITLATLLVHLVSVVFGRAVGDALPEGL 66 Query 68 AACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATVT 127 + ++ +AFL FA+W R D S+ E S A R AL V +F L+ELGDKT LAT+T Sbjct 67 ISVIAGLAFLGFALWTLRGDELSEEEKSKAATVTRNALIAVTVAFFLSELGDKTMLATIT 126 Query 128 LASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQ 169 LA+ H W G WIG+TLGM+ AD +AI G L LPE+ ++ Sbjct 127 LATQHGWFGTWIGSTLGMVAADAVAILVGRYLGTALPEKWIK 168 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 39/112 (35%), Positives = 55/112 (50%), Gaps = 10/112 (8%) Query 104 ALFTVVSSFALAELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRL 163 A +T ++ +AELGDK+ L +T A+ V G TL +L +++ G + L Sbjct 3 AFWTSLAVIFVAELGDKSQLMAMTFATRFRALTVLTGITLATLLVHLVSVVFGRAVGDAL 62 Query 164 PERLLQVLTGLLFLLFGLWLLFDDALG----------FRSVAIAVTAAVVLA 205 PE L+ V+ GL FL F LW L D L R+ IAVT A L+ Sbjct 63 PEGLISVIAGLAFLGFALWTLRGDELSEEEKSKAATVTRNALIAVTVAFFLS 114 >gi|256824874|ref|YP_003148834.1| hypothetical protein Ksed_10240 [Kytococcus sedentarius DSM 20547] gi|256688267|gb|ACV06069.1| predicted membrane protein [Kytococcus sedentarius DSM 20547] Length=192 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 84/184 (46%), Positives = 111/184 (61%), Gaps = 2/184 (1%) Query 7 LSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPAR 66 LS +F+AELGD+SQL+ MT+ RYR VL G+ +A VH +V IG ++G Sbjct 6 LSTAVIFIAELGDKSQLMAMTFAARYRARDVLIGITLATAIVHLASVGIGWWIGDAFANY 65 Query 67 PAAC--VSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLA 124 A V+ IAFL FA+W R D +D E + A+ V +F LAELGDKT LA Sbjct 66 QGAIAIVAGIAFLGFALWTLRGDELTDEEAAKARNSTGRAIVAVGVAFFLAELGDKTMLA 125 Query 125 TVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFGLWLL 184 T+TLA+ W G WIG+TLGM+ AD LAI G +L R+LPE+++ LF LFGL L+ Sbjct 126 TITLATREGWLGTWIGSTLGMVAADALAIVVGAVLGRKLPEKVITYGAAALFALFGLILI 185 Query 185 FDDA 188 + A Sbjct 186 LEGA 189 >gi|194336476|ref|YP_002018270.1| hypothetical protein Ppha_1390 [Pelodictyon phaeoclathratiforme BU-1] gi|194308953|gb|ACF43653.1| protein of unknown function UPF0016 [Pelodictyon phaeoclathratiforme BU-1] Length=216 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/203 (41%), Positives = 121/203 (60%), Gaps = 4/203 (1%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LSL +FLAELGD++QL+ +T Y VVL G+ A +H + IG F+G Sbjct 1 MDAFWLSLVMIFLAELGDKTQLVALTLATCYNTSVVLWGIFWATLAIHVFSAGIGWFIGD 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETS-PTAAEPRLALFTVVSSFALAELGDK 120 +P V+ IAF+ F W R D+ + E S T P + V S+F +AELGDK Sbjct 61 KLPTEWIKFVAGIAFIAFGFWTLRGDSLDEDEKSCKTGINP---FWLVFSTFFMAELGDK 117 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T L+T+TLAS + + VWIG+T+GM+L+DGLAI AG +L RLPE ++++ ++F LFG Sbjct 118 TMLSTITLASTNPFFPVWIGSTIGMVLSDGLAIIAGKMLGARLPENIIKIGAAVIFFLFG 177 Query 181 LWLLFDDALGFRSVAIAVTAAVV 203 ++ +++ GF V A + Sbjct 178 IFSMYEGGSGFALAIWGVAGAFI 200 >gi|119357123|ref|YP_911767.1| hypothetical protein Cpha266_1312 [Chlorobium phaeobacteroides DSM 266] gi|119354472|gb|ABL65343.1| protein of unknown function UPF0016 [Chlorobium phaeobacteroides DSM 266] Length=216 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/204 (41%), Positives = 124/204 (61%), Gaps = 4/204 (1%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LSL +FLAELGD++QL+ +T Y VV+ G+ A VH + AIG F+G Sbjct 1 MDAFWLSLVMIFLAELGDKTQLVALTLATCYNTRVVIWGIFWATLAVHVFSAAIGWFIGD 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETS-PTAAEPRLALFTVVSSFALAELGDK 120 +P + ++ IAF+ F W R DT D E S T P +FT +F +AELGDK Sbjct 61 RLPGEWISFIAGIAFIGFGFWTLRGDTLDDDEESCKTTIHPFWLVFT---TFFMAELGDK 117 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T L+T+TLA+++ + VW+G+T+GM+L+DGLAI AG +L +LPE+ +++ +F LFG Sbjct 118 TMLSTITLATNNPFLPVWLGSTIGMVLSDGLAIIAGKMLGAKLPEKTIKIGAACIFFLFG 177 Query 181 LWLLFDDALGFRSVAIAVTAAVVL 204 + +++ GF A AV+L Sbjct 178 AFSMYEGGSGFNLSIWASAVAVIL 201 >gi|110597558|ref|ZP_01385844.1| Protein of unknown function UPF0016 [Chlorobium ferrooxidans DSM 13031] gi|110340877|gb|EAT59351.1| Protein of unknown function UPF0016 [Chlorobium ferrooxidans DSM 13031] Length=216 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/203 (40%), Positives = 125/203 (62%), Gaps = 4/203 (1%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LSL +FLAELGD++QL+ +T Y+ VVL G+ A VH + IG F+G Sbjct 1 MDAFWLSLVMIFLAELGDKTQLVALTLATCYKTGVVLWGIFWATLAVHVFSAGIGWFIGG 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETS-PTAAEPRLALFTVVSSFALAELGDK 120 ++P ++ IAF++F W + DT D E S T P + V S+F +AELGDK Sbjct 61 SLPVDWIKFLAGIAFIVFGFWTLKGDTLDDDEKSCKTGINP---FWLVFSTFFMAELGDK 117 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T L+T+TLAS + + VW+G+T+GM+++DGLAI G +L RLPE ++++ ++F LFG Sbjct 118 TMLSTITLASTNPFIPVWLGSTIGMVISDGLAIIIGKMLGTRLPEHIIKIGAAVIFFLFG 177 Query 181 LWLLFDDALGFRSVAIAVTAAVV 203 + +FD F + A++A ++ Sbjct 178 IINMFDGGSRFSLIIWALSALLI 200 >gi|83589263|ref|YP_429272.1| hypothetical protein Moth_0395 [Moorella thermoacetica ATCC 39073] gi|83572177|gb|ABC18729.1| Protein of unknown function UPF0016 [Moorella thermoacetica ATCC 39073] Length=216 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 80/190 (43%), Positives = 118/190 (63%), Gaps = 4/190 (2%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LLSLG +F+AELGD++QL+ +T R+ VVL G+ A VH ++VA+G F+G Sbjct 1 MKAFLLSLGLIFIAELGDKTQLVALTLATRFNARVVLAGIFTATLLVHVISVALGEFVGV 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDS-ETSPTAAEPRLALFTVVSSFALAELGDK 120 +P ++ +AF+ F +W R D+ D + + A P L VV +F LAE GDK Sbjct 61 LIPTAWTHFLAGLAFIGFGLWTLRGDSLDDERDNAHRIASPFL---LVVVTFFLAEFGDK 117 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T L+TVTLA+ + VW+G+TLGM+L+DGLAI G + RLPER++++ +F +FG Sbjct 118 TMLSTVTLATTYSIIPVWLGSTLGMVLSDGLAIWIGQAMGSRLPERVIRLGAAFIFFVFG 177 Query 181 LWLLFDDALG 190 L+ F L Sbjct 178 LFSTFQGGLN 187 >gi|21673921|ref|NP_661986.1| hypothetical protein CT1095 [Chlorobium tepidum TLS] gi|21647061|gb|AAM72328.1| membrane protein, putative [Chlorobium tepidum TLS] Length=221 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/187 (40%), Positives = 115/187 (62%), Gaps = 5/187 (2%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LSL +FLAELGD++QL+ +T Y VVL G+ A VH + IG F+G Sbjct 1 MGAFWLSLVMIFLAELGDKTQLVALTLATCYNTRVVLWGIFWATLAVHVFSAGIGWFVGG 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSET--SPTAAEPRLALFTVVSSFALAELGD 119 +P A ++ I+F+IF W R D+ D ET T P + V S+F +AELGD Sbjct 61 LLPGDWIAFIAGISFIIFGFWTLRGDSLDDDETGECKTGVNP---FWIVFSTFFMAELGD 117 Query 120 KTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLF 179 KT L T++LA+ + + VW+G+TLGM+++DGLA+ G ++ + LPE+ +++ ++F LF Sbjct 118 KTMLTTISLATTNPFLPVWLGSTLGMVVSDGLAVIVGRMMGKNLPEKAIRIGASVVFFLF 177 Query 180 GLWLLFD 186 G W +++ Sbjct 178 GAWWMYE 184 >gi|297564019|ref|YP_003682992.1| protein of unknown function UPF0016 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848468|gb|ADH70486.1| protein of unknown function UPF0016 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=197 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/175 (42%), Positives = 106/175 (61%), Gaps = 1/175 (0%) Query 11 AVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPARPAAC 70 A+F+AE+GD++QL+ M+ RYR V+ G+ A VH +V + LG+ +P Sbjct 14 AIFIAEMGDKTQLVAMSLATRYRALTVILGITAATAVVHAGSVLLAEVLGAALPTDWLTL 73 Query 71 VSAIAFLIFAVWVWREDTASDSETSPTAAE-PRLALFTVVSSFALAELGDKTTLATVTLA 129 + +AFL F W R D SD + + A+ R A TV F +AELGDKT LAT+T+ Sbjct 74 AAGVAFLFFGAWTLRGDEMSDKDEARAASRRIRSAFATVFVVFLVAELGDKTMLATITVG 133 Query 130 SDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFGLWLL 184 + HHW VWIG+T+GM+ AD +AI G +L ++LPER +Q+ LF + G+ +L Sbjct 134 TQHHWLPVWIGSTVGMVAADAIAIALGAVLGKKLPERAIQIGAATLFFVAGVAML 188 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 35/110 (32%), Positives = 54/110 (50%), Gaps = 2/110 (1%) Query 110 SSFAL--AELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERL 167 S+FA+ AE+GDKT L ++LA+ + V +G T + ++ +L LP Sbjct 11 SAFAIFIAEMGDKTQLVAMSLATRYRALTVILGITAATAVVHAGSVLLAEVLGAALPTDW 70 Query 168 LQVLTGLLFLLFGLWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQ 217 L + G+ FL FG W L D + + A A + + A AT V VA+ Sbjct 71 LTLAAGVAFLFFGAWTLRGDEMSDKDEARAASRRIRSAFATVFVVFLVAE 120 >gi|72163062|ref|YP_290719.1| hypothetical protein Tfu_2663 [Thermobifida fusca YX] gi|71916794|gb|AAZ56696.1| conserved hypothetical protein [Thermobifida fusca YX] Length=204 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/186 (42%), Positives = 111/186 (60%), Gaps = 6/186 (3%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 L A +S V +AE+GD++QL+ M+ RYR VL G+ A VHG++V + LG Sbjct 4 LGALGMSTAVVLVAEMGDKTQLVAMSLASRYRIRTVLLGITAATVVVHGISVLLAEILGM 63 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALF-TVVSSFALAELGDK 120 +P + ++ +AFL F VW R D +D++ + A P ++F TV F LAELGDK Sbjct 64 ALPHDWLSLIAGLAFLGFGVWTLRGDELTDADEARAATRPTRSVFLTVAMIFFLAELGDK 123 Query 121 TTLATVTLASDH-----HWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLL 175 T LATVT+ +DH W VWIG+T+GM+ AD L I G LL ++LPE ++++ L Sbjct 124 TMLATVTVGADHVGIPLSWLAVWIGSTVGMVAADALGIALGALLGKKLPEHVIRIGAATL 183 Query 176 FLLFGL 181 F L GL Sbjct 184 FFLAGL 189 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/76 (37%), Positives = 43/76 (57%), Gaps = 0/76 (0%) Query 114 LAELGDKTTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTG 173 +AE+GDKT L ++LAS + V +G T ++ G+++ +L LP L ++ G Sbjct 16 VAEMGDKTQLVAMSLASRYRIRTVLLGITAATVVVHGISVLLAEILGMALPHDWLSLIAG 75 Query 174 LLFLLFGLWLLFDDAL 189 L FL FG+W L D L Sbjct 76 LAFLGFGVWTLRGDEL 91 >gi|78188765|ref|YP_379103.1| hypothetical protein Cag_0794 [Chlorobium chlorochromatii CaD3] gi|78170964|gb|ABB28060.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length=213 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 81/204 (40%), Positives = 120/204 (59%), Gaps = 4/204 (1%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LSL +FLAELGD++QL+ +T Y VVL G+ A VH + AIG F+G Sbjct 1 MDAFWLSLVMIFLAELGDKTQLVALTLATCYNTSVVLWGIFWATLAVHVFSAAIGWFIGD 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETSPT-AAEPRLALFTVVSSFALAELGDK 120 +P V+ +AF+ F W R D+ + E S P +FT +F +AELGDK Sbjct 61 QLPTEWILFVAGVAFIAFGFWTLRGDSLDEEEESCKRGINPFWLVFT---TFFMAELGDK 117 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T L+T+T+AS H + VW+G+T+GM+L+DGLAI G ++ ++LPE L++ +F LFG Sbjct 118 TMLSTITIASTHPFLPVWLGSTVGMVLSDGLAIVLGKMVGKQLPETLIKRGAAAIFFLFG 177 Query 181 LWLLFDDALGFRSVAIAVTAAVVL 204 + ++D F + A+ VVL Sbjct 178 AYSMYDGGATFSPLIWAIAGMVVL 201 >gi|328953104|ref|YP_004370438.1| protein of unknown function UPF0016 [Desulfobacca acetoxidans DSM 11109] gi|328453428|gb|AEB09257.1| protein of unknown function UPF0016 [Desulfobacca acetoxidans DSM 11109] Length=192 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/187 (41%), Positives = 113/187 (61%), Gaps = 2/187 (1%) Query 7 LSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGSTVPAR 66 LSLG +FLAELGD++QL+ + R++ WVVL G+ A VH +V +G G +P Sbjct 6 LSLGLIFLAELGDKTQLVALLLATRFKAWVVLAGILTATLLVHAFSVTLGGGAGHLLPPG 65 Query 67 PAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDKTTLATV 126 +S +AF+ F W R D+ + E + TV +F +AELGDKT L+TV Sbjct 66 WIYVLSGLAFIGFGWWTLRGDSVDEDEYQSWCYNSPFVIVTV--TFFMAELGDKTMLSTV 123 Query 127 TLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFGLWLLFD 186 TLA+ + VW+G++LGM+L+D LAI AG +L +RLPER L++ ++F+ FGL+ + Sbjct 124 TLAASQNLMPVWLGSSLGMVLSDALAIWAGQILGQRLPERALKIGAAVIFIAFGLFYIIY 183 Query 187 DALGFRS 193 A+ + Sbjct 184 GAVNLEA 190 >gi|194333906|ref|YP_002015766.1| hypothetical protein Paes_1084 [Prosthecochloris aestuarii DSM 271] gi|194311724|gb|ACF46119.1| protein of unknown function UPF0016 [Prosthecochloris aestuarii DSM 271] Length=215 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 80/217 (37%), Positives = 124/217 (58%), Gaps = 4/217 (1%) Query 2 LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWVVLTGVAIAAFTVHGVAVAIGHFLGS 61 + A LSL +F+AELGD+SQL+ ++ Y VVL G+ + VH + AIG F+G Sbjct 1 MDAFWLSLVMIFIAELGDKSQLLALSLATCYNTKVVLWGIFFSTLAVHVFSSAIGSFMGG 60 Query 62 TVPARPAACVSAIAFLIFAVWVWREDTASDSETSPT-AAEPRLALFTVVSSFALAELGDK 120 +P V+ ++F+ + W R D D + S P +FT +F +AELGDK Sbjct 61 LLPTDWIMFVAGLSFIAYGFWTLRGDALDDEDASCKRTIHPFWLVFT---TFFMAELGDK 117 Query 121 TTLATVTLASDHHWAGVWIGTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLLFG 180 T L TV+LA+ + + VWIG+TLGM+++D LAIG G +L + LPE+ ++V G++F +FG Sbjct 118 TMLGTVSLATTNPFLPVWIGSTLGMVISDALAIGVGKILGKNLPEQTVKVGAGMIFFVFG 177 Query 181 LWLLFDDALGFRSVAIAVTAAVVLAAATTAVSVRVAQ 217 +++ GF V A AV++ + R +Q Sbjct 178 GLTMYEGGKGFSPVVWASAGAVIVLMGVLFLRHRQSQ 214 Lambda K H 0.323 0.136 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 505781532318 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40