BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3855
Length=216
Score E
Sequences producing significant alignments: (Bits) Value
gi|254574836|pdb|3G1O|A Chain A, Ethr From Mycobacterium Tubercu... 439 1e-121
gi|254574834|pdb|3G1L|A Chain A, Ethr From Mycobacterium Tubercu... 439 2e-121
gi|56966246|pdb|1U9O|A Chain A, Crystal Structure Of The Transcr... 439 2e-121
gi|254574835|pdb|3G1M|A Chain A, Ethr From Mycobacterium Tubercu... 437 5e-121
gi|15610991|ref|NP_218372.1| transcriptional regulatory represso... 437 7e-121
gi|317457510|gb|ADV29776.1| transcriptional regulatory repressor... 435 2e-120
gi|317457508|gb|ADV29775.1| transcriptional regulatory repressor... 434 3e-120
gi|56966245|pdb|1U9N|A Chain A, Crystal Structure Of The Transcr... 427 6e-118
gi|240168331|ref|ZP_04746990.1| transcriptional regulatory repre... 360 8e-98
gi|183985374|ref|YP_001853665.1| TetR family transcriptional reg... 343 1e-92
gi|118620041|ref|YP_908373.1| TetR family transcriptional regula... 342 3e-92
gi|15826909|ref|NP_301172.1| transcriptional regulator [Mycobact... 308 3e-82
gi|254821452|ref|ZP_05226453.1| transcriptional regulatory repre... 280 1e-73
gi|108802021|ref|YP_642218.1| TetR family transcriptional regula... 279 2e-73
gi|119871173|ref|YP_941125.1| TetR family transcriptional regula... 278 4e-73
gi|126438000|ref|YP_001073691.1| TetR family transcriptional reg... 259 2e-67
gi|120406626|ref|YP_956455.1| TetR family transcriptional regula... 258 3e-67
gi|41406277|ref|NP_959113.1| hypothetical protein MAP0179c [Myco... 250 1e-64
gi|342860108|ref|ZP_08716760.1| TetR family transcriptional regu... 249 2e-64
gi|254773230|ref|ZP_05214746.1| hypothetical protein MaviaA2_009... 249 2e-64
gi|118462741|ref|YP_879467.1| TetR family transcriptional regula... 247 8e-64
gi|336461862|gb|EGO40717.1| transcriptional regulator [Mycobacte... 247 8e-64
gi|118468283|ref|YP_890654.1| TetR family transcriptional regula... 246 2e-63
gi|296166985|ref|ZP_06849399.1| TetR family transcriptional regu... 246 2e-63
gi|333992812|ref|YP_004525426.1| TetR family transcriptional reg... 239 2e-61
gi|315446705|ref|YP_004079584.1| TetR family transcriptional reg... 231 4e-59
gi|15827524|ref|NP_301787.1| TetR family transcriptional regulat... 229 2e-58
gi|145221557|ref|YP_001132235.1| TetR family transcriptional reg... 227 9e-58
gi|296170917|ref|ZP_06852454.1| TetR family transcriptional regu... 226 2e-57
gi|342858547|ref|ZP_08715202.1| TetR family transcriptional regu... 225 3e-57
gi|159038126|ref|YP_001537379.1| TetR family transcriptional reg... 225 3e-57
gi|169628081|ref|YP_001701730.1| TetR family transcriptional reg... 223 2e-56
gi|302867732|ref|YP_003836369.1| regulatory protein TetR [Microm... 221 4e-56
gi|111026296|ref|YP_708579.1| TetR family transcriptional regula... 96.7 2e-18
gi|333027676|ref|ZP_08455740.1| putative short chain dehydrogena... 94.7 8e-18
gi|298246923|ref|ZP_06970728.1| transcriptional regulator, TetR ... 94.4 9e-18
gi|302556436|ref|ZP_07308778.1| TetR family transcriptional regu... 90.5 2e-16
gi|21218783|ref|NP_624562.1| TetR family transcriptional regulat... 89.4 3e-16
gi|118462781|ref|YP_884182.1| TetR family transcriptional regula... 88.6 6e-16
gi|316305584|gb|ADU56258.1| putative tetR-family transcriptional... 88.2 7e-16
gi|319951456|ref|ZP_08025266.1| TetR family transcriptional regu... 88.2 8e-16
gi|325673017|ref|ZP_08152711.1| transcriptional regulator [Rhodo... 85.5 5e-15
gi|312141723|ref|YP_004009059.1| tetr family transcriptional reg... 85.5 5e-15
gi|320012916|gb|ADW07766.1| regulatory protein TetR [Streptomyce... 85.1 5e-15
gi|256397954|ref|YP_003119518.1| TetR family transcriptional reg... 84.7 8e-15
gi|320012886|gb|ADW07736.1| regulatory protein TetR [Streptomyce... 84.3 1e-14
gi|294649677|ref|ZP_06727088.1| transcriptional regulator [Acine... 84.3 1e-14
gi|50085844|ref|YP_047354.1| transcriptional regulator [Acinetob... 83.2 2e-14
gi|302546925|ref|ZP_07299267.1| TetR-family transcriptional regu... 82.4 4e-14
gi|163840689|ref|YP_001625094.1| TetR family transcriptional reg... 82.4 4e-14
>gi|254574836|pdb|3G1O|A Chain A, Ethr From Mycobacterium Tuberculosis In Complex With
Compound Bdm14500
Length=255
Score = 439 bits (1128), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 215/216 (99%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
+TTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 20 MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 79
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV
Sbjct 80 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 139
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE
Sbjct 140 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 199
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 200 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 235
>gi|254574834|pdb|3G1L|A Chain A, Ethr From Mycobacterium Tuberculosis In Complex With
Compound Bdm14744
Length=256
Score = 439 bits (1128), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 215/216 (99%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
+TTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 21 MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 80
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV
Sbjct 81 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 140
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE
Sbjct 141 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 200
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 201 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 236
>gi|56966246|pdb|1U9O|A Chain A, Crystal Structure Of The Transcriptional Regulator Ethr
In A Ligand Bound Conformation
gi|56966247|pdb|1U9O|B Chain B, Crystal Structure Of The Transcriptional Regulator Ethr
In A Ligand Bound Conformation
Length=236
Score = 439 bits (1128), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 216/216 (100%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 21 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 80
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV
Sbjct 81 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 140
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE
Sbjct 141 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 200
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 201 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 236
>gi|254574835|pdb|3G1M|A Chain A, Ethr From Mycobacterium Tuberculosis In Complex With
Compound Bdm31381
gi|305677856|pdb|3O8G|A Chain A, Ethr From Mycobacterium Tuberculosis In Complex With
Compound Bdm14801
gi|305677857|pdb|3O8H|A Chain A, Ethr From Mycobacterium Tuberculosis In Complex With
Compound Bdm14950
Length=236
Score = 437 bits (1124), Expect = 5e-121, Method: Compositional matrix adjust.
Identities = 215/216 (99%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
+TTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 21 MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 80
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV
Sbjct 81 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 140
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE
Sbjct 141 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 200
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 201 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 236
>gi|15610991|ref|NP_218372.1| transcriptional regulatory repressor protein (TETR-family) ETHR
[Mycobacterium tuberculosis H37Rv]
gi|15843486|ref|NP_338523.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31795029|ref|NP_857522.1| transcriptional regulatory repressor protein (TETR-family) ETHR
[Mycobacterium bovis AF2122/97]
83 more sequence titles
Length=216
Score = 437 bits (1123), Expect = 7e-121, Method: Compositional matrix adjust.
Identities = 215/216 (99%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
+TTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 1 MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV
Sbjct 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE
Sbjct 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
>gi|317457510|gb|ADV29776.1| transcriptional regulatory repressor protein EthR [Mycobacterium
tuberculosis]
Length=216
Score = 435 bits (1118), Expect = 2e-120, Method: Compositional matrix adjust.
Identities = 214/216 (99%), Positives = 215/216 (99%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
+TTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 1 MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENP DTDRENMWRTGINVFFETFGSHKAV
Sbjct 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPTDTDRENMWRTGINVFFETFGSHKAV 120
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE
Sbjct 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
>gi|317457508|gb|ADV29775.1| transcriptional regulatory repressor protein EthR [Mycobacterium
tuberculosis]
Length=216
Score = 434 bits (1117), Expect = 3e-120, Method: Compositional matrix adjust.
Identities = 214/216 (99%), Positives = 215/216 (99%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
+TTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 1 MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINV FETFGSHKAV
Sbjct 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVLFETFGSHKAV 120
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE
Sbjct 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
>gi|56966245|pdb|1U9N|A Chain A, Crystal Structure Of The Transcriptional Regulator Ethr
In A Ligand Bound Conformation Opens Therapeutic Perspectives
Against Tuberculosis And Leprosy
Length=236
Score = 427 bits (1098), Expect = 6e-118, Method: Compositional matrix adjust.
Identities = 212/216 (99%), Positives = 212/216 (99%), Gaps = 0/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT
Sbjct 21 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 80
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVNQAD ALQTLAENPADTDREN WRTGINVFFETFGSHKAV
Sbjct 81 FYFYFPSKEAVLLTLLDRVVNQADXALQTLAENPADTDRENXWRTGINVFFETFGSHKAV 140
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATSVEVAELWSTF QKWIAYTAAVIDAERDRGAAPRTLPAHELATALNL NE
Sbjct 141 TRAGQAARATSVEVAELWSTFXQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLXNE 200
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
Sbjct 201 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 236
>gi|240168331|ref|ZP_04746990.1| transcriptional regulatory repressor protein [Mycobacterium kansasii
ATCC 12478]
Length=215
Score = 360 bits (924), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/216 (83%), Positives = 189/216 (88%), Gaps = 1/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
+ TS QASL RGRRTARPSGDDRELAIL TAE LL+DRPLADISVDDLAKGAGISRPT
Sbjct 1 MATSPTGQASLHRGRRTARPSGDDRELAILVTAEKLLKDRPLADISVDDLAKGAGISRPT 60
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVV +AD AL+ L + P D DR+ MWRTGINVFFETFGSHKAV
Sbjct 61 FYFYFPSKEAVLLTLLDRVVTEADTALENLIQAP-DADRDTMWRTGINVFFETFGSHKAV 119
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
TRAGQAARATS EV LWSTFMQKWI+YTA VI+ ERDRGAAP T+PA ELATALNLMNE
Sbjct 120 TRAGQAARATSAEVRHLWSTFMQKWISYTAEVIETERDRGAAPVTVPALELATALNLMNE 179
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTLFASFA EQP VPEA VLDTLVHIWV+SIYGE
Sbjct 180 RTLFASFAAEQPCVPEAHVLDTLVHIWVSSIYGEGH 215
>gi|183985374|ref|YP_001853665.1| TetR family transcriptional regulator [Mycobacterium marinum
M]
gi|183178700|gb|ACC43810.1| transcriptional regulatory repressor protein (TetR-family) EthR
[Mycobacterium marinum M]
Length=216
Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/216 (79%), Positives = 184/216 (86%), Gaps = 1/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
V+TS ASQAS RGRR+ARPSGD+RELAIL TAE LLEDRP+ DISVDDLAKGAGISRPT
Sbjct 2 VSTSTASQASPSRGRRSARPSGDERELAILNTAEKLLEDRPMVDISVDDLAKGAGISRPT 61
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVN+AD AL LA+ P D D MWR GINVFFETFGSH+AV
Sbjct 62 FYFYFPSKEAVLLTLLDRVVNEADAALDNLAQAP-DVDHVTMWRNGINVFFETFGSHRAV 120
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
+ GQ R+ S EV ELWSTFMQKWIAYTA +I+AER+RGAAP TLPA ELATALNLMNE
Sbjct 121 VQGGQGVRSISAEVRELWSTFMQKWIAYTAKIIEAERERGAAPVTLPALELATALNLMNE 180
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTL ASF E+PSVPE V+DTLVHIWV+SIYGE R
Sbjct 181 RTLSASFLAEEPSVPETHVVDTLVHIWVSSIYGEAR 216
>gi|118620041|ref|YP_908373.1| TetR family transcriptional regulator [Mycobacterium ulcerans
Agy99]
gi|118572151|gb|ABL06902.1| transcriptional regulatory repressor protein (TetR-family) EthR
[Mycobacterium ulcerans Agy99]
Length=215
Score = 342 bits (876), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 167/216 (78%), Positives = 184/216 (86%), Gaps = 1/216 (0%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
++TS ASQASL RGRR+ARPSGD+RELAIL TAE LLEDRP+ DISVDDLAKGAGISRPT
Sbjct 1 MSTSTASQASLSRGRRSARPSGDERELAILNTAEKLLEDRPMVDISVDDLAKGAGISRPT 60
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYFPSKEAVLLTLLDRVVN+AD AL LA+ P D D MWR GINVFFETFGSH+AV
Sbjct 61 FYFYFPSKEAVLLTLLDRVVNEADAALDNLAQAP-DVDHVTMWRNGINVFFETFGSHRAV 119
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
+ GQ R+ S EV ELWSTFMQKWIAYTA +I+AER+RGAAP TLPA ELATALNLMNE
Sbjct 120 VQGGQGVRSISTEVRELWSTFMQKWIAYTAKIIEAERERGAAPVTLPALELATALNLMNE 179
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTL ASF E+PSVPE V+DTLVH+WV+SIYG R
Sbjct 180 RTLSASFLAEEPSVPETHVVDTLVHVWVSSIYGAAR 215
>gi|15826909|ref|NP_301172.1| transcriptional regulator [Mycobacterium leprae TN]
gi|221229387|ref|YP_002502803.1| putative transcriptional regulator [Mycobacterium leprae Br4923]
gi|13092456|emb|CAC29572.1| putative transcriptional regulator [Mycobacterium leprae]
gi|219932494|emb|CAR70157.1| putative transcriptional regulator [Mycobacterium leprae Br4923]
Length=214
Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/197 (80%), Positives = 166/197 (85%), Gaps = 2/197 (1%)
Query 20 PSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 79
PSGDDRELAILATAE LLEDRPL +ISVD LAK AGISRPTFYFYF SKEAVLLTLLDRV
Sbjct 20 PSGDDRELAILATAEQLLEDRPLTEISVDYLAKSAGISRPTFYFYFASKEAVLLTLLDRV 79
Query 80 VNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWS 139
N+A+ AL+TL +N D R N WRTGINVFFETFGSHKAVT AGQ R + EV +LWS
Sbjct 80 FNKANAALETLIKN-RDNKRGNKWRTGINVFFETFGSHKAVTCAGQVTR-DNTEVRKLWS 137
Query 140 TFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARV 199
TFMQKWI+YTAAVIDAER RG AP TLPA ELATALNLMNER LFASF EQP VPE+RV
Sbjct 138 TFMQKWISYTAAVIDAERKRGVAPDTLPATELATALNLMNERALFASFTAEQPHVPESRV 197
Query 200 LDTLVHIWVTSIYGENR 216
LDTLVHIWV+SIY E R
Sbjct 198 LDTLVHIWVSSIYNEIR 214
>gi|254821452|ref|ZP_05226453.1| transcriptional regulatory repressor protein [Mycobacterium intracellulare
ATCC 13950]
Length=212
Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/202 (67%), Positives = 166/202 (83%), Gaps = 2/202 (0%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRR+ARPSGDDRELAIL TAE LL++RPLADISVDDLAKGAG+SRPTFYFYFPSK+AVL
Sbjct 11 RGRRSARPSGDDRELAILTTAERLLQERPLADISVDDLAKGAGLSRPTFYFYFPSKDAVL 70
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
TL +RV+ +AD AL++L +P D + +WR GINVF ETFG+H+AV+ A AAR T+
Sbjct 71 FTLFERVIMEADSALESLVASPP-ADLKALWRIGINVFVETFGTHRAVSLAADAAR-TNK 128
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQP 192
+V ELWS FMQKW+ + VI+AER RGAAP TLPA L+ ALNL+NE+ + ++FAG +P
Sbjct 129 DVGELWSRFMQKWVDHITTVIEAERARGAAPVTLPARNLSAALNLLNEKVMLSAFAGGRP 188
Query 193 SVPEARVLDTLVHIWVTSIYGE 214
SVP ++LDTLVHIWV+S+YGE
Sbjct 189 SVPSEQLLDTLVHIWVSSVYGE 210
>gi|108802021|ref|YP_642218.1| TetR family transcriptional regulator [Mycobacterium sp. MCS]
gi|108772440|gb|ABG11162.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS]
Length=221
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/216 (66%), Positives = 171/216 (80%), Gaps = 7/216 (3%)
Query 1 VTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPT 60
VTT ASQA PRGRR+ARPSGDDRE AILATAE LLE RP A+ISVDDLAKGAGISRPT
Sbjct 13 VTT--ASQARAPRGRRSARPSGDDREQAILATAEQLLEARPFAEISVDDLAKGAGISRPT 70
Query 61 FYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAV 120
FYFYF SKEAVLLTL +RV+ +AD AL+ A N E++WR GI VFF+TFG+H+ V
Sbjct 71 FYFYFGSKEAVLLTLWERVIREADAALENAASNATS---EDVWRPGIKVFFDTFGAHRGV 127
Query 121 TRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNE 180
T A A+ + + EV ++++ FMQKWI +TAA I+AER RGAAP+TLPA ++ATALNLMNE
Sbjct 128 TVA--ASGSDNAEVRDVFARFMQKWIDFTAATIEAERRRGAAPQTLPARDIATALNLMNE 185
Query 181 RTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
RTL A+FA E P +P RVLD+LVH+W ++YGE R
Sbjct 186 RTLLAAFAAETPGIPPDRVLDSLVHVWTCAVYGECR 221
>gi|119871173|ref|YP_941125.1| TetR family transcriptional regulator [Mycobacterium sp. KMS]
gi|119697262|gb|ABL94335.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS]
Length=209
Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/213 (66%), Positives = 169/213 (80%), Gaps = 5/213 (2%)
Query 4 SAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYF 63
+ ASQA PRGRR+ARPSGDDRE AILATAE LLE RP A+ISVDDLAKGAGISRPTFYF
Sbjct 2 TTASQARAPRGRRSARPSGDDREQAILATAEQLLEARPFAEISVDDLAKGAGISRPTFYF 61
Query 64 YFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRA 123
YF SKEAVLLTL +RV+ +AD AL+ A N E++WR GI VFF+TFG+H+ VT A
Sbjct 62 YFGSKEAVLLTLWERVIREADAALENAASNATS---EDVWRPGIKVFFDTFGAHRGVTVA 118
Query 124 GQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTL 183
A+ + + EV ++++ FMQKWI +TAA I+AER RGAAP+TLPA ++ATALNLMNERTL
Sbjct 119 --ASGSDNAEVRDVFARFMQKWIDFTAATIEAERRRGAAPQTLPARDIATALNLMNERTL 176
Query 184 FASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
A+FA E P +P RVLD+LVH+W ++YGE R
Sbjct 177 LAAFAAETPGIPPDRVLDSLVHVWTCAVYGECR 209
>gi|126438000|ref|YP_001073691.1| TetR family transcriptional regulator [Mycobacterium sp. JLS]
gi|126237800|gb|ABO01201.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS]
Length=209
Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/213 (65%), Positives = 168/213 (79%), Gaps = 5/213 (2%)
Query 4 SAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYF 63
+ ASQA RGRR+ARPSGDDRE AILATAE LLE RP A+ISVDDLAKGAGISRPTFYF
Sbjct 2 TTASQARASRGRRSARPSGDDREQAILATAEQLLEARPFAEISVDDLAKGAGISRPTFYF 61
Query 64 YFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRA 123
YF SKEAVLLTL +RV+ +AD AL+ A N E++WR GI VFF+TFG+H+ VT A
Sbjct 62 YFGSKEAVLLTLWERVIREADAALENAASNATS---EDVWRPGIKVFFDTFGAHRGVTVA 118
Query 124 GQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTL 183
A+ + + EV ++++ FMQKWI +TAA I+AER RGAAP+TLPA ++ATALNLMNERTL
Sbjct 119 --ASGSNNAEVRDVFAKFMQKWIDFTAATIEAERRRGAAPQTLPARDIATALNLMNERTL 176
Query 184 FASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
A+FA E P +P RVLD+LVH+W ++YGE R
Sbjct 177 LAAFAAETPGIPPDRVLDSLVHVWTCAVYGECR 209
>gi|120406626|ref|YP_956455.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119959444|gb|ABM16449.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii
PYR-1]
Length=224
Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/196 (66%), Positives = 153/196 (79%), Gaps = 3/196 (1%)
Query 21 SGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVV 80
SGDDRELAIL TAE LL DR LA+ISVDDLAKGAGISRPTFYFYF SK+AVLLTLL+RV+
Sbjct 30 SGDDRELAILETAERLLADRSLAEISVDDLAKGAGISRPTFYFYFASKDAVLLTLLERVI 89
Query 81 NQADMAL-QTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWS 139
+AD AL Q +AE +DR +WR GINVFFETFG+H+AV ++T+ E ELWS
Sbjct 90 AEADAALAQLIAER--SSDRRTIWRRGINVFFETFGAHRAVCATTVGVKSTNSEARELWS 147
Query 140 TFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARV 199
MQ+WI + AAVI+AER GAAP T+PA EL+TALNLMNE + A+F G QP++P+ RV
Sbjct 148 RSMQRWIDHIAAVIEAERADGAAPVTVPARELSTALNLMNESVMTATFTGHQPAIPDDRV 207
Query 200 LDTLVHIWVTSIYGEN 215
LD LVHIW TSIYG+
Sbjct 208 LDNLVHIWTTSIYGKT 223
>gi|41406277|ref|NP_959113.1| hypothetical protein MAP0179c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394625|gb|AAS02496.1| hypothetical protein MAP_0179c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=213
Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/214 (61%), Positives = 156/214 (73%), Gaps = 9/214 (4%)
Query 6 ASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYF 65
A Q RGRR RP+GD+RE AILATAE LLE RP A ISVDDLAKGAG+SRPTFYFYF
Sbjct 4 AGQTRALRGRRAIRPTGDEREQAILATAERLLETRPFAGISVDDLAKGAGLSRPTFYFYF 63
Query 66 PSKEAVLLTLLDRVVNQADM----ALQTLAENPADTDRENMWRTGINVFFETFGSHKAVT 121
SKEAV+L+LL+ V+ +AD A+Q L +P +WR GI FF F SH+A+
Sbjct 64 KSKEAVVLSLLEPVIARADAEFDGAVQRLPTDP-----RRVWRNGIKAFFTAFSSHRALA 118
Query 122 RAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNER 181
RA A ATS E+ +WS FMQKWI TAA+I AER+RGAAP T+PA +LAT+LN MNER
Sbjct 119 RAATEALATSSELRAVWSGFMQKWIDQTAAMITAERERGAAPDTIPAADLATSLNQMNER 178
Query 182 TLFASFAGEQPSVPEARVLDTLVHIWVTSIYGEN 215
T+ A+ + E P+V E RV+DTL HIWV+SIYGE+
Sbjct 179 TMMAALSAETPAVAEDRVVDTLTHIWVSSIYGES 212
>gi|342860108|ref|ZP_08716760.1| TetR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342132486|gb|EGT85715.1| TetR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=213
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/204 (63%), Positives = 151/204 (75%), Gaps = 3/204 (1%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRR RP+GD+RE AILATAE LLE+R LADISVDDLAKGAGISRPTFYFYF SKEAVL
Sbjct 11 RGRRAIRPTGDEREQAILATAERLLEERSLADISVDDLAKGAGISRPTFYFYFKSKEAVL 70
Query 73 LTLLDRVVNQADMALQTLAEN-PADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATS 131
L+LL+ V+ +AD PAD R +WR GI FF F +H+AV R A ATS
Sbjct 71 LSLLEPVIARADSEFDGAVHRLPADPRR--VWRNGIKAFFTAFSTHRAVARTATEALATS 128
Query 132 VEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQ 191
E+ LWS +MQKWI TAA+I AER RGAAP +PA +LAT+LN MNERT+ A+ + E
Sbjct 129 TELRSLWSGYMQKWIDQTAAMITAERARGAAPDNIPAADLATSLNQMNERTMMAALSAET 188
Query 192 PSVPEARVLDTLVHIWVTSIYGEN 215
P+V ARV+DTL HIW++SIYGE+
Sbjct 189 PAVEAARVVDTLTHIWISSIYGES 212
>gi|254773230|ref|ZP_05214746.1| hypothetical protein MaviaA2_00911 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=213
Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/207 (62%), Positives = 154/207 (75%), Gaps = 9/207 (4%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRR RP+GD+RE AILATAE LLE RP A ISVDDLAKGAG+SRPTFYFYF SKEAV+
Sbjct 11 RGRRAIRPTGDEREQAILATAERLLETRPFAGISVDDLAKGAGLSRPTFYFYFKSKEAVV 70
Query 73 LTLLDRVVNQADM----ALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAAR 128
L+LL+ V+ +AD A+Q L +P +WR GI FF F SH+A+ RA A
Sbjct 71 LSLLEPVIARADAEFDGAVQRLPTDP-----RRVWRNGIKAFFTAFSSHRALARAATEAL 125
Query 129 ATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFA 188
ATS E+ +WS FMQKWI TAA+I AER+RGAAP T+PA +LAT+LN MNERT+ A+ +
Sbjct 126 ATSSELRSVWSGFMQKWIDQTAAMITAERERGAAPDTIPAADLATSLNQMNERTMMAALS 185
Query 189 GEQPSVPEARVLDTLVHIWVTSIYGEN 215
E P+V E RV+DTL HIWV+SIYGE+
Sbjct 186 AETPAVAEDRVVDTLTHIWVSSIYGES 212
>gi|118462741|ref|YP_879467.1| TetR family transcriptional regulator [Mycobacterium avium 104]
gi|118164028|gb|ABK64925.1| transcriptional regulator, TetR family protein [Mycobacterium
avium 104]
Length=213
Score = 247 bits (631), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/216 (60%), Positives = 156/216 (73%), Gaps = 9/216 (4%)
Query 4 SAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYF 63
+ A Q RGRR RP+GD+RE AILATA LLE RP A ISVDDLAKGAG+SRPTFYF
Sbjct 2 TTAGQTRALRGRRAIRPTGDEREQAILATALRLLETRPFAGISVDDLAKGAGLSRPTFYF 61
Query 64 YFPSKEAVLLTLLDRVVNQADM----ALQTLAENPADTDRENMWRTGINVFFETFGSHKA 119
YF SKEAV+L+LL+ V+ +AD A+Q L +P +WR GI FF F SH+A
Sbjct 62 YFKSKEAVVLSLLEPVIARADAEFDGAVQRLPTDP-----RRVWRNGIKAFFTAFSSHRA 116
Query 120 VTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMN 179
+ RA A ATS E+ +WS FMQKWI TAA+I AER+RGAAP T+PA +LAT+LN MN
Sbjct 117 LARAATEALATSSELRSVWSGFMQKWIDQTAAMITAERERGAAPDTIPAADLATSLNQMN 176
Query 180 ERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGEN 215
ERT+ A+ + E P+V E RV+DTL HIWV+SIYGE+
Sbjct 177 ERTMMAALSAETPAVAEDRVVDTLTHIWVSSIYGES 212
>gi|336461862|gb|EGO40717.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis
S397]
Length=213
Score = 247 bits (631), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/214 (60%), Positives = 155/214 (73%), Gaps = 9/214 (4%)
Query 6 ASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYF 65
A Q RGRR RP+GD+RE AILATA LLE RP A ISVDDLAKGAG+SRPTFYFYF
Sbjct 4 AGQTRALRGRRAIRPTGDEREQAILATAGRLLETRPFAGISVDDLAKGAGLSRPTFYFYF 63
Query 66 PSKEAVLLTLLDRVVNQADM----ALQTLAENPADTDRENMWRTGINVFFETFGSHKAVT 121
SKEAV+L+LL+ V+ +AD A+Q L +P +WR GI FF F SH+A+
Sbjct 64 KSKEAVVLSLLEPVIARADAEFDGAVQRLPTDP-----RRVWRNGIKAFFTAFSSHRALA 118
Query 122 RAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNER 181
RA A ATS E+ +WS FMQKWI TAA+I AER+RGAAP T+PA +LAT+LN MNER
Sbjct 119 RAATEALATSSELRAVWSGFMQKWIDQTAAMITAERERGAAPDTIPAADLATSLNQMNER 178
Query 182 TLFASFAGEQPSVPEARVLDTLVHIWVTSIYGEN 215
T+ A+ + E P+V E RV+DTL HIWV+SIYGE+
Sbjct 179 TMMAALSAETPAVAEDRVVDTLTHIWVSSIYGES 212
>gi|118468283|ref|YP_890654.1| TetR family transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
gi|306755740|sp|A0R666.1|ETHR_MYCS2 RecName: Full=HTH-type transcriptional regulator EthR
gi|118169570|gb|ABK70466.1| transcriptional regulator, TetR family protein [Mycobacterium
smegmatis str. MC2 155]
Length=217
Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/211 (63%), Positives = 156/211 (74%), Gaps = 3/211 (1%)
Query 4 SAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYF 63
+ ASQ PRGRR+ARPSGDDRE AILATA+ LLE + A+ISVDDLAKGAGISRPTFYF
Sbjct 2 TTASQTRTPRGRRSARPSGDDREAAILATAQRLLETKKFAEISVDDLAKGAGISRPTFYF 61
Query 64 YFPSKEAVLLTLLDRVVNQADMALQTLAEN-PADTDRENMWRTGINVFFETFGSHKAVTR 122
YFPSKEAVLL+L+D ++ +AD E+ PAD R R GI +FF +FGSH A R
Sbjct 62 YFPSKEAVLLSLIDPLIKRADSGFDNAVESMPADPQR--AIRRGIEIFFNSFGSHPATAR 119
Query 123 AGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERT 182
AG A +S E E WS MQKWIA TAA+I AER+RGAAP T+PA +LAT+LNLMNERT
Sbjct 120 AGTEALKSSPEFKEFWSGLMQKWIAATAALITAERERGAAPDTIPALDLATSLNLMNERT 179
Query 183 LFASFAGEQPSVPEARVLDTLVHIWVTSIYG 213
+ A+ A EQP V +V+ TL HIW+ SIYG
Sbjct 180 MMAALADEQPGVAPEKVVATLTHIWLNSIYG 210
>gi|296166985|ref|ZP_06849399.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897665|gb|EFG77257.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=213
Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/217 (59%), Positives = 155/217 (72%), Gaps = 9/217 (4%)
Query 4 SAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYF 63
+ A Q RGRR RPSGDDRE AILATAE LLE R ADISVDDLA+GAG+SRPTFYF
Sbjct 2 TTAGQTRALRGRRAIRPSGDDREQAILATAERLLEQRSFADISVDDLARGAGLSRPTFYF 61
Query 64 YFPSKEAVLLTLLDRVVNQADM----ALQTLAENPADTDRENMWRTGINVFFETFGSHKA 119
YF SK+AVLL+LL+ V+ +AD A+Q L +P +WR GI FF F +H+
Sbjct 62 YFKSKDAVLLSLLEPVIARADSEFDGAVQRLPTDP-----RRVWRNGIKAFFTAFSTHRR 116
Query 120 VTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMN 179
+ RA A ATS E+ +W FMQKWI TAA+I+AER RGAAP T+PA +LAT+LN MN
Sbjct 117 LARAATEALATSSELRAVWLGFMQKWIDQTAALINAERARGAAPETIPAVDLATSLNQMN 176
Query 180 ERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR 216
ERT+ A+ + E P+V E RV++TL HIWVTSIYGE R
Sbjct 177 ERTMMAALSAETPAVHEDRVVNTLAHIWVTSIYGEGR 213
>gi|333992812|ref|YP_004525426.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601]
gi|333488780|gb|AEF38172.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601]
Length=212
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/196 (63%), Positives = 146/196 (75%), Gaps = 9/196 (4%)
Query 22 GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVN 81
GDDRE AIL TAE LLE RPLA+ISVDDLAKGAGISRPTFYFYF SK+AVLL+LL+ ++
Sbjct 19 GDDRERAILTTAERLLEQRPLAEISVDDLAKGAGISRPTFYFYFKSKDAVLLSLLEPLIA 78
Query 82 QADM----ALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAEL 137
AD A+Q L +P +WR+GI FF F SH+A+ RAG A ATS E +
Sbjct 79 AADENFVGAVQRLPSDP-----RRIWRSGIKAFFIAFSSHRAIARAGTEALATSPEFKAM 133
Query 138 WSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEA 197
W+ FMQ+WI TAA+I AERDRGAAPRT+PA +LAT+LN MNERT+ A+ E+PSV
Sbjct 134 WNGFMQRWIQQTAAMITAERDRGAAPRTIPALDLATSLNQMNERTMMAALIAEEPSVAHD 193
Query 198 RVLDTLVHIWVTSIYG 213
RV+DTL HIWV+SIYG
Sbjct 194 RVVDTLTHIWVSSIYG 209
>gi|315446705|ref|YP_004079584.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1]
gi|315265008|gb|ADU01750.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1]
Length=233
Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/196 (62%), Positives = 141/196 (72%), Gaps = 3/196 (1%)
Query 20 PSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 79
PSGDDRE AIL TAE LL+ RPL DISVDDLA+GAGISRPTFYFYF SK+AVLL LLDRV
Sbjct 34 PSGDDRESAILTTAERLLDQRPLNDISVDDLARGAGISRPTFYFYFSSKDAVLLALLDRV 93
Query 80 VNQADMALQTLAENPADTDRE--NMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAEL 137
+ +A+ D E +W+ I FETF +H+AV AG A R ++ EV +
Sbjct 94 IAEANARADAALGGRDDRPVEPAGVWQ-AIKALFETFAAHRAVMLAGAAMRPSNHEVQRV 152
Query 138 WSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEA 197
WS FMQKWI YTA I AER+RGAAP TLPA +LA ALNLMNER + +SFA EQ SVP
Sbjct 153 WSLFMQKWIDYTAVSISAERERGAAPDTLPAEDLAIALNLMNERIMLSSFASEQASVPAE 212
Query 198 RVLDTLVHIWVTSIYG 213
R++ TL HIWV+SIYG
Sbjct 213 RLVGTLAHIWVSSIYG 228
>gi|15827524|ref|NP_301787.1| TetR family transcriptional regulator [Mycobacterium leprae TN]
gi|221230001|ref|YP_002503417.1| putative TetR-family transcriptional regulator [Mycobacterium
leprae Br4923]
gi|699124|gb|AAA62890.1| u1756b [Mycobacterium leprae]
gi|13093074|emb|CAC31451.1| putative TetR-family transcriptional regulator [Mycobacterium
leprae]
gi|219933108|emb|CAR71165.1| putative TetR-family transcriptional regulator [Mycobacterium
leprae Br4923]
Length=217
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/202 (61%), Positives = 150/202 (75%), Gaps = 3/202 (1%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRR+++ SGDDRE AILA AE LL +RPL D SVD+LAKGAGISRPTFYFYFPSK AVL
Sbjct 17 RGRRSSQLSGDDREQAILAVAERLLAERPLGDFSVDELAKGAGISRPTFYFYFPSKNAVL 76
Query 73 LTLLDRVVNQADMALQTLAEN-PADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATS 131
L+LLD + ++ A++ LAE PAD +WR+ I FFE G+H+AV AG AA+ATS
Sbjct 77 LSLLDDLNMKSRSAVEALAEQLPADP--AAVWRSAITAFFEVCGTHRAVAVAGAAAKATS 134
Query 132 VEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQ 191
EV LWST MQ+WI Y A I AER G AP T+PA +LA AL LM ER + A+F+ E+
Sbjct 135 PEVRRLWSTVMQQWIDYNTAAIQAERKCGVAPDTIPAEDLAVALQLMTERVMAATFSDEK 194
Query 192 PSVPEARVLDTLVHIWVTSIYG 213
P +P+ +V+DTLVHIW+ SIYG
Sbjct 195 PLIPDKKVIDTLVHIWLASIYG 216
>gi|145221557|ref|YP_001132235.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|145214043|gb|ABP43447.1| transcriptional regulator, TetR family [Mycobacterium gilvum
PYR-GCK]
Length=214
Score = 227 bits (578), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/199 (61%), Positives = 141/199 (71%), Gaps = 3/199 (1%)
Query 20 PSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 79
PSGDDRE AIL TAE LLE RPL DISVDDLA+GAGISRPTFYFYF SK+AVLL LLDRV
Sbjct 16 PSGDDRESAILTTAEQLLEQRPLNDISVDDLARGAGISRPTFYFYFSSKDAVLLALLDRV 75
Query 80 VNQADMALQTLAENPADTDRE--NMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAEL 137
+ +A+ D E +W+ I FETF +H+AV AG A R + EV +
Sbjct 76 IAEANARADAALGGRDDRPLEPAGVWQ-AIKALFETFAAHRAVMLAGAAMRPNNPEVQRV 134
Query 138 WSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEA 197
WS FMQKWI YTAA I AER+RGAAP TLPA +LA ALNLMNER + ++FA EQ +V
Sbjct 135 WSHFMQKWIDYTAASIRAERERGAAPDTLPAEDLAIALNLMNERIMLSAFASEQAAVTAD 194
Query 198 RVLDTLVHIWVTSIYGENR 216
R++ TL HIWV+SIYG R
Sbjct 195 RLVGTLAHIWVSSIYGTPR 213
>gi|296170917|ref|ZP_06852454.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894466|gb|EFG74210.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=215
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/200 (61%), Positives = 150/200 (75%), Gaps = 1/200 (0%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRR+A SGDDRE AILATAE LL++RPLAD SVDDLAKGAGISRPTFYFYF SK AVL
Sbjct 15 RGRRSAPHSGDDRERAILATAERLLQERPLADFSVDDLAKGAGISRPTFYFYFRSKNAVL 74
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
L+LLD++ ++A AL+ L + D +WR I FFE GSH AV AG AA+AT+
Sbjct 75 LSLLDQMNSKAQAALRALG-GISSGDPAELWRARIEAFFEVSGSHPAVAVAGAAAKATNP 133
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQP 192
EV +LWST MQ+WI+ T A I AER RGAAP T+PA +L+ ALN+++ER + A+F E
Sbjct 134 EVRQLWSTLMQRWISLTTAAIKAERGRGAAPDTVPAEQLSVALNMLSERVMAATFTAEDE 193
Query 193 SVPEARVLDTLVHIWVTSIY 212
++PE R +DTL+HIW+ SIY
Sbjct 194 AMPEDRAVDTLLHIWLASIY 213
>gi|342858547|ref|ZP_08715202.1| TetR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342134251|gb|EGT87431.1| TetR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=215
Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/211 (60%), Positives = 154/211 (73%), Gaps = 3/211 (1%)
Query 2 TTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTF 61
T + QAS RGRR + GDDRE AILATAE LL++RPLAD SVDDLAKGAGISRPTF
Sbjct 6 TQTKYPQAS--RGRRASHYPGDDREQAILATAERLLQERPLADFSVDDLAKGAGISRPTF 63
Query 62 YFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVT 121
YFYF SK AVLL+LLD++ ++A AL L + + D E +WR I FFE GSH+AV
Sbjct 64 YFYFRSKNAVLLSLLDQMNSKAQAALGAL-DVVSSGDPEAIWRARIESFFEVSGSHRAVA 122
Query 122 RAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNER 181
AG AA+AT+ EV +LWS M KWI+YT I AER RGAAP T+PA EL+ ALN+++ER
Sbjct 123 VAGAAAKATNPEVRQLWSALMGKWISYTTIAIKAERGRGAAPDTIPAAELSVALNMLSER 182
Query 182 TLFASFAGEQPSVPEARVLDTLVHIWVTSIY 212
+ A+F E ++PE RV+DTL+HIW+ SIY
Sbjct 183 MMAATFTAEDQAIPEDRVIDTLLHIWLASIY 213
>gi|159038126|ref|YP_001537379.1| TetR family transcriptional regulator [Salinispora arenicola
CNS-205]
gi|157916961|gb|ABV98388.1| transcriptional regulator, TetR family [Salinispora arenicola
CNS-205]
Length=223
Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/213 (55%), Positives = 146/213 (69%), Gaps = 11/213 (5%)
Query 6 ASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYF 65
++ A+ PRGRRTAR GDDRE AIL TAE LL RP ADIS+DDLA+GAGISRPTFYFYF
Sbjct 3 STAATPPRGRRTARSVGDDRESAILGTAERLLAQRPFADISIDDLARGAGISRPTFYFYF 62
Query 66 PSKEAVLLTLLDRVVNQADM------ALQTLAENPADTDRENMWRTGINVFFETFGSHKA 119
K+AVLLTLLDRV+ +A+ L LAE+P + WR I+ F ETFG+H+A
Sbjct 63 SGKDAVLLTLLDRVIEEANANAVAGGVLDRLAEDP-----QTRWRELIHRFHETFGAHRA 117
Query 120 VTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMN 179
V A R T+ EV LW++ M+ W+ T A I AER RGAAP LPA LA ALN MN
Sbjct 118 VVLACAEVRGTNAEVRRLWASVMEHWVQTTEAAIAAERRRGAAPDGLPARALAIALNSMN 177
Query 180 ERTLFASFAGEQPSVPEARVLDTLVHIWVTSIY 212
ER +A+FAG+ P++ E V+D L+ +W+ +IY
Sbjct 178 ERVWYATFAGDGPAIAEQDVVDVLLDVWLAAIY 210
>gi|169628081|ref|YP_001701730.1| TetR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169240048|emb|CAM61076.1| Putative transcriptional regulator, TetR family [Mycobacterium
abscessus]
Length=212
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/201 (54%), Positives = 147/201 (74%), Gaps = 1/201 (0%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGR+T RPSGD+R AILATAE LL RPLAD+SVDDLA+GAGISRPTFYFYF SKE+VL
Sbjct 7 RGRKTTRPSGDERIQAILATAEELLGKRPLADVSVDDLARGAGISRPTFYFYFSSKESVL 66
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
LTL +R++ +AD + ++ + A T WR I +F+ FGSH+A+T A + + TS
Sbjct 67 LTLAERIIEEADANVASI-DPAAMTSPAQYWRAVIKAYFDAFGSHRALTVALSSMQGTSP 125
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQP 192
E+ + WS + W+A T I+AER RGAAP +PA ++A ALNL+N+ + A+F G+QP
Sbjct 126 ELDQRWSEVTENWVANTTVGIEAERARGAAPSVVPARDIAIALNLINQAMMRATFTGQQP 185
Query 193 SVPEARVLDTLVHIWVTSIYG 213
+V + +V+DTL+H+W+ +IYG
Sbjct 186 AVDDGKVVDTLLHVWLNAIYG 206
>gi|302867732|ref|YP_003836369.1| regulatory protein TetR [Micromonospora aurantiaca ATCC 27029]
gi|315505866|ref|YP_004084753.1| regulatory protein TetR [Micromonospora sp. L5]
gi|302570591|gb|ADL46793.1| regulatory protein TetR [Micromonospora aurantiaca ATCC 27029]
gi|315412485|gb|ADU10602.1| regulatory protein TetR [Micromonospora sp. L5]
Length=226
Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/213 (55%), Positives = 147/213 (70%), Gaps = 2/213 (0%)
Query 1 VTTSAASQASLP-RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRP 59
+TT+ + P RGRR R +GDDRE AILATAE LL +RP ADIS+DDLA+GAGISRP
Sbjct 1 MTTARTPTGAAPTRGRRAGRSTGDDRETAILATAERLLAERPFADISIDDLARGAGISRP 60
Query 60 TFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKA 119
TFYFYFPSK+AVLLTLLDRV +AD A + E A+ R + WR I F TFG H+
Sbjct 61 TFYFYFPSKDAVLLTLLDRVTEEADAAAGGVFERLAEDPRAH-WRELIARFHATFGGHRD 119
Query 120 VTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMN 179
V A R T+ EV LW+ +++W+ A I++ER RGAAP LPA +LA ALN MN
Sbjct 120 VVLACAQVRGTNAEVRRLWAEVLERWVRAVQAAIESERARGAAPDGLPARDLAIALNSMN 179
Query 180 ERTLFASFAGEQPSVPEARVLDTLVHIWVTSIY 212
ER +A+FAG+ P+V E V+D L+ +W+T+IY
Sbjct 180 ERVWYATFAGDGPAVAERDVVDVLLDVWLTAIY 212
>gi|111026296|ref|YP_708579.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110825139|gb|ABH00421.1| transcriptional regulator, TetR family [Rhodococcus jostii RHA1]
Length=247
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/207 (33%), Positives = 98/207 (48%), Gaps = 3/207 (1%)
Query 8 QASLPR-GRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFP 66
S PR GRR + GD RE AIL A +L PL ++S+DDLAK AG+SR +FYFYF
Sbjct 33 NGSEPRTGRRNLK--GDRREQAILEGAYEILRTEPLRNVSIDDLAKRAGLSRSSFYFYFE 90
Query 67 SKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQA 126
SK VL LL V A + E P E ++ + H V R
Sbjct 91 SKWQVLSALLSSVTADVFTASAMIFERPPGISPEAAIEHAVSEVMVVWERHGHVLREVGD 150
Query 127 ARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFAS 186
A A + W + +++ AA I+ +R G A PA LA AL M ER L
Sbjct 151 AAAAEPTLGAQWDKILGRFVDAAAAAIERDRAAGVALDGPPARSLAAALIWMGERNLGLM 210
Query 187 FAGEQPSVPEARVLDTLVHIWVTSIYG 213
+ ++ +++T+ +W+ +++G
Sbjct 211 SMRSENAIRTEDMVETVTTVWLRTVFG 237
>gi|333027676|ref|ZP_08455740.1| putative short chain dehydrogenase [Streptomyces sp. Tu6071]
gi|332747528|gb|EGJ77969.1| putative short chain dehydrogenase [Streptomyces sp. Tu6071]
Length=204
Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/199 (37%), Positives = 101/199 (51%), Gaps = 8/199 (4%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
R RR A GD RE AIL T E LL D+ ++V D+A+GAGI+R YFYF SK+ V+
Sbjct 8 RSRRAAERKGDVRERAILDTCEALLADKGYDAMTVGDIAQGAGITRGALYFYFGSKQEVV 67
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
L+ R V + ++ A AD R + + E + H V R T
Sbjct 68 TALVARTVEH--LWERSRATAEADEPRRAI-AAAMGRTVELWNEHGLVMRTAIDLSLTVP 124
Query 133 EVAELWSTFMQKWIAYTAAVID-AERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQ 191
E+ ELW+ +IA AV++ A G AP PA +A+AL M ERT + + +
Sbjct 125 EIGELWNHTADLFIAAITAVLERAGIQAGTAPDQAPA--MASALCWMIERTFYHASQESR 182
Query 192 PSVPEARVLDTLVHIWVTS 210
++ EA +T HIW+TS
Sbjct 183 ENLQEAS--ETCEHIWLTS 199
>gi|298246923|ref|ZP_06970728.1| transcriptional regulator, TetR family [Ktedonobacter racemifer
DSM 44963]
gi|297549582|gb|EFH83448.1| transcriptional regulator, TetR family [Ktedonobacter racemifer
DSM 44963]
Length=220
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/202 (33%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query 15 RRTARPSGDDREL--AILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
++T R + R++ AIL E LL + ++SV D+ A +SR +FYFYF SK VL
Sbjct 11 QKTFREESEQRDVRKAILDATEQLLAHQRFDELSVADILSSAQVSRASFYFYFESKYVVL 70
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
L+ RVVNQA +A E ++ + + R G + + + H V RA +
Sbjct 71 GELVRRVVNQAQVAAGPWVEEDIESPEQTL-RQGTSQGLQLWIQHAPVLRAIVENWRSDE 129
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRT-LPAHELATALNLMNERTLFASFAGEQ 191
+A LW M+ + I+ +R G APRT + A LA+ L M+ER + + G
Sbjct 130 RLAALWMEMMEGFTQAATHRIERDRATGRAPRTSVDASTLASTLTWMSERIYYLAAIGHP 189
Query 192 PSVPEARVLDTLVHIWVTSIYG 213
E +V+D L +W++ IY
Sbjct 190 AFHDEQQVIDVLTEVWLSVIYN 211
>gi|302556436|ref|ZP_07308778.1| TetR family transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
gi|302474054|gb|EFL37147.1| TetR family transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
Length=204
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/203 (37%), Positives = 97/203 (48%), Gaps = 16/203 (7%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRRT GD RE AIL T E LL + ++V D+A+GAGI+R YFYF SK+ V+
Sbjct 8 RGRRTTERKGDVRERAILDTCEALLTHKGYDAMTVGDIAQGAGITRGALYFYFGSKQEVV 67
Query 73 LTLLDRVVNQ----ADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAAR 128
L+ R V + + QT + P M RT E + H V R
Sbjct 68 TALVARTVEHLWERSRVTAQT--DEPRQAIAAAMQRT-----VELWNEHGPVLRTAIDLS 120
Query 129 ATSVEVAELWSTFMQKWIAYTAAVID-AERDRGAAPRTLPAHELATALNLMNERTLFASF 187
T E+ ELW +IA AV++ A GAAP A +A AL M ERT + +
Sbjct 121 LTVPEIGELWMHTADLFIAAITAVLEHAGIQAGAAPDQASA--MARALCWMIERTFYHAS 178
Query 188 AGEQPSVPEARVLDTLVHIWVTS 210
+ + EA T HIW+TS
Sbjct 179 QESREKLQEASA--TCEHIWLTS 199
>gi|21218783|ref|NP_624562.1| TetR family transcriptional regulator [Streptomyces coelicolor
A3(2)]
gi|289774100|ref|ZP_06533478.1| TetR family transcriptional regulator [Streptomyces lividans
TK24]
gi|5763889|emb|CAB53270.1| putative tetR-family transcriptional regulator [Streptomyces
coelicolor A3(2)]
gi|289704299|gb|EFD71728.1| TetR family transcriptional regulator [Streptomyces lividans
TK24]
Length=204
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/204 (36%), Positives = 95/204 (47%), Gaps = 16/204 (7%)
Query 12 PRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAV 71
P GRR GD RE AIL T E LL D+ ++V D+A+GAGI+R YFYF SK V
Sbjct 7 PLGRRGIERKGDVRERAILDTCEALLADKGYDAMTVGDIAQGAGITRGALYFYFGSKHEV 66
Query 72 LLTLLDRVVNQ----ADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAA 127
+ L+ R V + + QT + P M RT E + H V R
Sbjct 67 VAALVARTVEHLWERSRVTAQT--DEPRQAIAAAMHRT-----VELWNEHGLVMRTAIDL 119
Query 128 RATSVEVAELWSTFMQKWIAYTAAVID-AERDRGAAPRTLPAHELATALNLMNERTLFAS 186
T E+ ELWS +IA AV++ A G AP A +A AL M ERT + +
Sbjct 120 SLTVPEIGELWSHTADLFIAAITAVLERAGIQSGTAPEQASA--MARALCWMIERTFYHA 177
Query 187 FAGEQPSVPEARVLDTLVHIWVTS 210
+ + EA T HIW+ S
Sbjct 178 SQESREKLQEASA--TCEHIWLVS 199
>gi|118462781|ref|YP_884182.1| TetR family transcriptional regulator [Mycobacterium avium 104]
gi|118164068|gb|ABK64965.1| transcriptional regulator, TetR family protein, putative [Mycobacterium
avium 104]
Length=192
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/187 (32%), Positives = 90/187 (49%), Gaps = 1/187 (0%)
Query 28 AILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMAL 87
++ A LLE RP DISV D+ + AG+SR TFYFYF SK +VL LL++ + +
Sbjct 6 SLFAATLTLLESRPFTDISVADILEVAGVSRATFYFYFSSKFSVLSGLLEQAMGDIFSTV 65
Query 88 QTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIA 147
Q D + + + H+AV RA + LW ++K+++
Sbjct 66 QPFLSRSDDASPQEALERSLRAVTAAWHRHRAVLRAAAHHWHVDAGLHALWLQIVEKFVS 125
Query 148 YTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVP-EARVLDTLVHI 206
A I+ +R G T A LA+AL ER L+ + G +PS+ E L L+ +
Sbjct 126 AGAEEIERQRAAGLIKSTESARTLASALFWGTERVLYIAGLGVEPSLSDEEAALGPLLAM 185
Query 207 WVTSIYG 213
W ++YG
Sbjct 186 WRGTLYG 192
>gi|316305584|gb|ADU56258.1| putative tetR-family transcriptional regulator [Streptomyces
kanamyceticus]
Length=204
Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/201 (36%), Positives = 96/201 (48%), Gaps = 12/201 (5%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
R RR+A GD RE AIL T E LL + ++V D+A+GAGI+R YFYF SK+ V+
Sbjct 8 RSRRSAERKGDLRERAILDTCEALLAHKGYNAMTVGDIAQGAGITRGALYFYFGSKQEVV 67
Query 73 LTLLDRVVNQADMALQTLAEN--PADTDRENMWRTGINVFFETFGSHKAVTRAGQAARAT 130
+ L+ R V +T A+ P E M RT E + H V R T
Sbjct 68 VALVARTVEHLWERSRTTAQTDEPRQAIAEAMQRT-----VELWNEHGLVMRTAIDLSLT 122
Query 131 SVEVAELWSTFMQKWIAYTAAVID-AERDRGAAPRTLPAHELATALNLMNERTLFASFAG 189
E+ ELWS +I AV++ A G P A +A AL M ERT + +
Sbjct 123 VPEIGELWSHTADLFITAITAVLERAGIQSGTEPEQASA--MARALCWMIERTFYHASQE 180
Query 190 EQPSVPEARVLDTLVHIWVTS 210
+ ++ A T HIW+TS
Sbjct 181 SRETLQGASA--TCEHIWLTS 199
>gi|319951456|ref|ZP_08025266.1| TetR family transcriptional regulator [Dietzia cinnamea P4]
gi|319434893|gb|EFV90203.1| TetR family transcriptional regulator [Dietzia cinnamea P4]
Length=217
Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/198 (35%), Positives = 95/198 (48%), Gaps = 12/198 (6%)
Query 20 PSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRV 79
P GD R A+LA ++ L+ L DISV DL + AGI+R FYFYF SK A + LL V
Sbjct 12 PRGDRRREALLAALDDRLKTTALDDISVADLTESAGITRSAFYFYFDSKAAAVGVLLAMV 71
Query 80 VNQADMALQTLAENPADTDRENMWRTGINVFFETFGSH---KA-VTRAGQAARATSVEVA 135
++AD A++T D +RT + E KA + RA AR+ +
Sbjct 72 QDEADAAVETAVRGEGD------FRTRVTAALERLTDRVLDKAHIYRALLTARSKHAQTR 125
Query 136 ELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVP 195
+LW + A + AER G AP + A LA L +NE T+ A + P P
Sbjct 126 DLWDDGRRALAVQIAEFLRAERAAGRAPEGVDADALAVGLIHINE-TVLEQLAYD-PGRP 183
Query 196 EARVLDTLVHIWVTSIYG 213
+L +WV ++YG
Sbjct 184 REPLLTVAADMWVRTVYG 201
>gi|325673017|ref|ZP_08152711.1| transcriptional regulator [Rhodococcus equi ATCC 33707]
gi|325556270|gb|EGD25938.1| transcriptional regulator [Rhodococcus equi ATCC 33707]
Length=229
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/205 (35%), Positives = 104/205 (51%), Gaps = 15/205 (7%)
Query 16 RTARPS-GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLT 74
RT R + G++R AIL E LLEDR L +I++ D+++ AG++R FYFYF +K +
Sbjct 30 RTRRANKGEERRAAILDAVERLLEDRTLDEINISDISRAAGVTRSGFYFYFDNKAKAVAA 89
Query 75 LLDRVVNQ-ADMALQTLAENPADTDRENMWRTGIN-VFFETFGS---HKAVTRAGQAARA 129
L V + + A LA RE R I+ + E G+ H + RA + AR
Sbjct 90 LSRTVYGEMQEGARGYLA-------REGSPREMIDGLITEVIGTWERHPNLYRALRDARD 142
Query 130 TSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFA-SFA 188
+ V E+W ++ A+VIDAER G A + LA L MN+R + + S
Sbjct 143 SDPTVREMWDHDRFSFVDPVASVIDAERTSGRAADGPDSRALAVVLLDMNDRAVESLSRG 202
Query 189 GEQPSVPEARVLDTLVHIWVTSIYG 213
G + PE + LV +W+ SIYG
Sbjct 203 GPEALTPET-AREALVAVWLNSIYG 226
>gi|312141723|ref|YP_004009059.1| tetr family transcriptional regulator [Rhodococcus equi 103S]
gi|311891062|emb|CBH50381.1| putative TetR family transcriptional regulator [Rhodococcus equi
103S]
Length=211
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/205 (35%), Positives = 104/205 (51%), Gaps = 15/205 (7%)
Query 16 RTARPS-GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLT 74
RT R + G++R AIL E LLEDR L +I++ D+++ AG++R FYFYF +K +
Sbjct 12 RTRRANKGEERRAAILDAVERLLEDRTLDEINISDISRAAGVTRSGFYFYFDNKAKAVAA 71
Query 75 LLDRVVNQ-ADMALQTLAENPADTDRENMWRTGIN-VFFETFGS---HKAVTRAGQAARA 129
L V + + A LA RE R I+ + E G+ H + RA + AR
Sbjct 72 LSRTVYGEMQEGARGYLA-------REGSPREMIDGLITEVIGTWERHPNLYRALRDARD 124
Query 130 TSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFA-SFA 188
+ V E+W ++ A+VIDAER G A + LA L MN+R + + S
Sbjct 125 SDPTVREMWDHDRFSFVDPVASVIDAERTSGRAADGPDSRALAVVLLDMNDRAVESLSRG 184
Query 189 GEQPSVPEARVLDTLVHIWVTSIYG 213
G + PE + LV +W+ SIYG
Sbjct 185 GPEALTPET-AREALVAVWLNSIYG 208
>gi|320012916|gb|ADW07766.1| regulatory protein TetR [Streptomyces flavogriseus ATCC 33331]
Length=205
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/198 (34%), Positives = 96/198 (49%), Gaps = 6/198 (3%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRRT GD RE AIL T E LL + ++V D+A+GAGI+R YFYF SK+ V+
Sbjct 9 RGRRTTGRKGDVRERAILDTCEALLAHKGYDAMTVGDVAQGAGITRGALYFYFGSKQEVV 68
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
L+ R V + ++ A D R+ + + E + H V R T
Sbjct 69 TALVARTVEH--LWERSRATAQTDEPRQAI-AAAMQRTVELWNEHGLVMRTAIDLSLTVP 125
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQP 192
E+ ELW +IA AV++ + A R A +A AL M ERT + + +
Sbjct 126 EIGELWKHTADLFIAAITAVLERAGIQ-AGTRPDQASAMARALCWMIERTFYHASQESRE 184
Query 193 SVPEARVLDTLVHIWVTS 210
++ EA +T HIW+ S
Sbjct 185 NLQEAS--ETCEHIWLIS 200
>gi|256397954|ref|YP_003119518.1| TetR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256364180|gb|ACU77677.1| transcriptional regulator, TetR family [Catenulispora acidiphila
DSM 44928]
Length=202
Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/201 (34%), Positives = 95/201 (48%), Gaps = 16/201 (7%)
Query 15 RRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLT 74
RR A+ GD RE AIL T E LL D+ ++V D+A+GAGI+R YFYF SK+ V+
Sbjct 9 RRAAQSKGDLRERAILDTCEALLTDKGYDAVTVGDIAQGAGITRGALYFYFGSKQEVVTA 68
Query 75 LLDRVVNQADMALQTLAENPADTDRENMWR----TGINVFFETFGSHKAVTRAGQAARAT 130
L+ R V L E T R ++ R T + E + H V R T
Sbjct 69 LVARTVEH-------LWERSRSTARADVPRQAIATAMRRTVELWNEHGPVMRTAIDLSLT 121
Query 131 SVEVAELWSTFMQKWIAYTAAVID-AERDRGAAPRTLPAHELATALNLMNERTLFASFAG 189
E+ LW+ +I AAV++ A + G P+ A +A AL M ER + +
Sbjct 122 VPEIGNLWNQTADLFIEAIAAVLEHAGVEPGDEPKQASA--MARALCWMIERNFYHASQE 179
Query 190 EQPSVPEARVLDTLVHIWVTS 210
+ S+ DT HIW+ S
Sbjct 180 SRESLQNTS--DTCEHIWLIS 198
>gi|320012886|gb|ADW07736.1| regulatory protein TetR [Streptomyces flavogriseus ATCC 33331]
Length=204
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/198 (34%), Positives = 96/198 (49%), Gaps = 6/198 (3%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
RGRRT GD RE AIL T E LL + ++V D+A+GAGI+R YFYF SK+ V+
Sbjct 8 RGRRTTERKGDVRERAILDTCEALLAHKGYDAMTVGDVAQGAGITRGALYFYFGSKQEVV 67
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
L+ R V + ++ A D R+ + + E + H V R T
Sbjct 68 TALVARTVEH--LWERSRATAQTDEPRQAI-AAAMQRTVELWNEHGLVMRTAIDLSLTVP 124
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQP 192
E+ ELW +IA AV++ + A R A +A AL M ERT + + +
Sbjct 125 EIGELWKHTADLFIAAITAVLERAGIQ-AGTRPDQASAMARALCWMIERTFYHASQESRE 183
Query 193 SVPEARVLDTLVHIWVTS 210
++ +A +T HIW+ S
Sbjct 184 NLQKAS--ETCEHIWLIS 199
>gi|294649677|ref|ZP_06727088.1| transcriptional regulator [Acinetobacter haemolyticus ATCC 19194]
gi|292824431|gb|EFF83223.1| transcriptional regulator [Acinetobacter haemolyticus ATCC 19194]
Length=212
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/199 (31%), Positives = 94/199 (48%), Gaps = 8/199 (4%)
Query 19 RPSGDDRE--LAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLL 76
RP D +E IL AE L +RP +++VD++ K G+ RP FY +F K + L ++
Sbjct 15 RPKHDPKESEREILNAAEKFLSERPFRELNVDEVMKLTGLKRPAFYVHFSDKYDLALCVV 74
Query 77 DRVVNQA-DMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVA 135
+ + +A + L N D +NV + H AV RA A V
Sbjct 75 QDIGQELFRLANRWLKGNNFPEDSLQALEGIVNV----YQKHGAVLRAIAEASVADARVE 130
Query 136 ELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVP 195
+++ T +Q +I T I E+ G + L E A AL + ER L +F G P
Sbjct 131 QIYRTLIQDFIDATIKHIHEEQASGRIQKKLNVEETARALIWLEERYLVEAF-GRLPHTD 189
Query 196 EARVLDTLVHIWVTSIYGE 214
V++ L +IW++++YGE
Sbjct 190 PKIVVNVLQNIWISTLYGE 208
>gi|50085844|ref|YP_047354.1| transcriptional regulator [Acinetobacter sp. ADP1]
gi|49531820|emb|CAG69532.1| putative transcriptional regulator (TetR family) [Acinetobacter
sp. ADP1]
Length=201
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (29%), Positives = 101/205 (50%), Gaps = 12/205 (5%)
Query 15 RRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLT 74
RR + + E IL A+ L +RP +++VD++ + G+ RP FY +F K + L
Sbjct 5 RRRPKHDPKESEQEILNAAKQFLNERPFRELTVDEVMRRTGLKRPAFYVHFRDKHDLALR 64
Query 75 LLDRVVNQ----ADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARAT 130
L+ + + AD L+ +NP +E++ R + + E + H V RA A +
Sbjct 65 LVQAIGQELFGIADRWLE--GDNP----QEDLRRALVGL-VEVYMKHSHVLRAFAEAASG 117
Query 131 SVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGE 190
V ++ F+Q++I+ A I E+ G + + E A AL + ER L F
Sbjct 118 DERVNSIYRAFVQEFISAAAQHIREEQATGQIQKDIDIDETARALIWLEERYLSDVFGRM 177
Query 191 QPSVPEARVLDTLVHIWVTSIYGEN 215
P+ PE V+ L +IW++++YG N
Sbjct 178 PPADPEV-VIRVLQNIWISTLYGSN 201
>gi|302546925|ref|ZP_07299267.1| TetR-family transcriptional regulator [Streptomyces hygroscopicus
ATCC 53653]
gi|302464543|gb|EFL27636.1| TetR-family transcriptional regulator [Streptomyces himastatinicus
ATCC 53653]
Length=204
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 93/200 (47%), Gaps = 10/200 (5%)
Query 13 RGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVL 72
R RRT GD RE IL T E LL + ++V D+A+GAGI+R YFYF SK+ V+
Sbjct 8 RSRRTTERKGDVRERVILDTCEALLARKGYDAMTVGDIAQGAGITRGALYFYFGSKQEVV 67
Query 73 LTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
L+ R V + ++ A AD R+ + + E + H V R +
Sbjct 68 TALVARTVEH--LWERSRATAQADEPRQAI-AAAMRRTVELWNEHGLVMRTAIDLSLSVP 124
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLP--AHELATALNLMNERTLFASFAGE 190
E+ ELWS +I AV++ G P T P A +A AL M ERT + A +
Sbjct 125 EIGELWSRTADLFITAITAVLERA---GVQPGTEPDQASAMARALCWMIERTFY--HASQ 179
Query 191 QPSVPEARVLDTLVHIWVTS 210
+ + T HIW+ S
Sbjct 180 ESREKLQKASSTCEHIWLVS 199
>gi|163840689|ref|YP_001625094.1| TetR family transcriptional regulator [Renibacterium salmoninarum
ATCC 33209]
gi|162954165|gb|ABY23680.1| transcriptional regulator, TetR family [Renibacterium salmoninarum
ATCC 33209]
Length=204
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/198 (34%), Positives = 91/198 (46%), Gaps = 16/198 (8%)
Query 15 RRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLT 74
RR A GD RE IL T E LL ++ ++V D+A+GA +SR YFYF SK+ +
Sbjct 10 RRPAERKGDIRERTILDTCEALLAEKGYEAMTVGDIAQGAELSRAAMYFYFGSKQETVTA 69
Query 75 LLDRVVNQ--ADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSV 132
L+ R V Q + + EN A+ M RT E + H V R T
Sbjct 70 LVARTVEQLWERSRVTSETENSAEAIAMAMQRT-----VELWSKHGLVMRTAIDLSHTVP 124
Query 133 EVAELWSTFMQKWIAYTAAVIDAERDRGAAP---RTLPAHELATALNLMNERTLFASFAG 189
E+ ELW+ +IA +V+ +R P +T A +A AL M ERTL+ + G
Sbjct 125 EIGELWNRTADLFIAAITSVL----ERAGVPAGGKTTQATAMAQALCWMIERTLYHASQG 180
Query 190 EQPSVPEARVLDTLVHIW 207
+ A T HIW
Sbjct 181 TLAELQSAS--STCAHIW 196
Lambda K H
0.318 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 260686263632
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40