BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3864
Length=402
Score E
Sequences producing significant alignments: (Bits) Value
gi|15611000|ref|NP_218381.1| hypothetical protein Rv3864 [Mycoba... 786 0.0
gi|148825072|ref|YP_001289826.1| hypothetical protein TBFG_13899... 786 0.0
gi|167967462|ref|ZP_02549739.1| hypothetical protein MtubH3_0526... 746 0.0
gi|31795038|ref|NP_857531.1| hypothetical protein Mb3894 [Mycoba... 719 0.0
gi|289445466|ref|ZP_06435210.1| conserved hypothetical protein [... 688 0.0
gi|308406274|ref|ZP_07669561.1| hypothetical protein TMLG_00359 ... 661 0.0
gi|240168343|ref|ZP_04747002.1| hypothetical protein MkanA1_0346... 592 5e-167
gi|183985410|ref|YP_001853701.1| hypothetical protein MMAR_5439 ... 575 6e-162
gi|294995551|ref|ZP_06801242.1| hypothetical protein Mtub2_13827... 535 6e-150
gi|339296669|gb|AEJ48780.1| hypothetical protein CCDC5079_3591 [... 504 8e-141
gi|240172060|ref|ZP_04750719.1| hypothetical protein MkanA1_2228... 439 3e-121
gi|289748397|ref|ZP_06507775.1| conserved hypothetical protein [... 355 6e-96
gi|339296670|gb|AEJ48781.1| hypothetical protein CCDC5079_3592 [... 235 1e-59
gi|240170265|ref|ZP_04748924.1| hypothetical protein MkanA1_1321... 206 7e-51
gi|240170262|ref|ZP_04748921.1| hypothetical protein MkanA1_1319... 191 2e-46
gi|240170266|ref|ZP_04748925.1| hypothetical protein MkanA1_1321... 188 1e-45
gi|240170263|ref|ZP_04748922.1| hypothetical protein MkanA1_1320... 186 5e-45
gi|240168062|ref|ZP_04746721.1| hypothetical protein MkanA1_0201... 181 2e-43
gi|240170261|ref|ZP_04748920.1| hypothetical protein MkanA1_1319... 174 3e-41
gi|240170271|ref|ZP_04748930.1| hypothetical protein MkanA1_1324... 165 1e-38
gi|240167908|ref|ZP_04746567.1| hypothetical protein MkanA1_0124... 157 4e-36
gi|183985393|ref|YP_001853684.1| hypothetical protein MMAR_5422 ... 155 9e-36
gi|183985392|ref|YP_001853683.1| hypothetical protein MMAR_5421 ... 154 3e-35
gi|240167905|ref|ZP_04746564.1| hypothetical protein MkanA1_0121... 151 2e-34
gi|183985387|ref|YP_001853678.1| hypothetical protein MMAR_5416 ... 151 2e-34
gi|240169622|ref|ZP_04748281.1| hypothetical protein MkanA1_0993... 149 6e-34
gi|240170258|ref|ZP_04748917.1| hypothetical protein MkanA1_1317... 134 4e-29
gi|183984585|ref|YP_001852876.1| hypothetical protein MMAR_4618 ... 132 9e-29
gi|183985401|ref|YP_001853692.1| hypothetical protein MMAR_5430 ... 129 7e-28
gi|183985391|ref|YP_001853682.1| hypothetical protein MMAR_5420 ... 128 2e-27
gi|183985400|ref|YP_001853691.1| hypothetical protein MMAR_5429 ... 126 5e-27
gi|183985395|ref|YP_001853686.1| hypothetical protein MMAR_5424 ... 117 4e-24
gi|183985394|ref|YP_001853685.1| hypothetical protein MMAR_5423 ... 116 7e-24
gi|308406275|ref|ZP_07669562.1| hypothetical protein TMLG_00360 ... 115 1e-23
gi|183985402|ref|YP_001853693.1| hypothetical protein MMAR_5431 ... 112 1e-22
gi|183985385|ref|YP_001853676.1| hypothetical protein MMAR_5414 ... 112 2e-22
gi|306778499|ref|ZP_07416836.1| conserved alanine and glycine ri... 111 2e-22
gi|240173316|ref|ZP_04751974.1| ESX-1 secretion-associated prote... 110 4e-22
gi|31794792|ref|NP_857285.1| hypothetical protein Mb3646c [Mycob... 110 5e-22
gi|15843226|ref|NP_338263.1| hypothetical protein MT3718 [Mycoba... 110 5e-22
gi|121639535|ref|YP_979759.1| hypothetical protein BCG_3680c [My... 110 5e-22
gi|289571853|ref|ZP_06452080.1| conserved alanine and glycine ri... 110 5e-22
gi|67975065|gb|AAY84560.1| Rv3616c [Integrating expression vecto... 108 2e-21
gi|15610752|ref|NP_218133.1| hypothetical protein Rv3616c [Mycob... 108 2e-21
gi|183985386|ref|YP_001853677.1| hypothetical protein MMAR_5415 ... 105 2e-20
gi|341603556|emb|CCC66237.1| conserved hypothetical alanine and ... 104 2e-20
gi|183985399|ref|YP_001853690.1| hypothetical protein MMAR_5428 ... 104 3e-20
gi|294995473|ref|ZP_06801164.1| hypothetical protein Mtub2_13415... 100 5e-19
gi|289441046|ref|ZP_06430790.1| conserved hypothetical protein [... 100 5e-19
gi|183985425|ref|YP_001853716.1| hypothetical protein MMAR_5454 ... 99.8 7e-19
>gi|15611000|ref|NP_218381.1| hypothetical protein Rv3864 [Mycobacterium tuberculosis H37Rv]
gi|15843496|ref|NP_338533.1| hypothetical protein MT3978 [Mycobacterium tuberculosis CDC1551]
gi|148663731|ref|YP_001285254.1| hypothetical protein MRA_3903 [Mycobacterium tuberculosis H37Ra]
37 more sequence titles
Length=402
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/402 (100%), Positives = 402/402 (100%), Gaps = 0/402 (0%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA
Sbjct 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL
Sbjct 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK
Sbjct 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
Query 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP
Sbjct 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
Query 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 300
GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA
Sbjct 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 300
Query 301 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG 360
GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG
Sbjct 301 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG 360
Query 361 GQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 402
GQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL
Sbjct 361 GQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 402
>gi|148825072|ref|YP_001289826.1| hypothetical protein TBFG_13899 [Mycobacterium tuberculosis F11]
gi|253800914|ref|YP_003033916.1| hypothetical protein TBMG_03912 [Mycobacterium tuberculosis KZN
1435]
gi|289556133|ref|ZP_06445343.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
8 more sequence titles
Length=402
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/402 (99%), Positives = 402/402 (100%), Gaps = 0/402 (0%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
MASGSGLCKTTSNFIWGQLL+LGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA
Sbjct 1 MASGSGLCKTTSNFIWGQLLVLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL
Sbjct 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK
Sbjct 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
Query 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP
Sbjct 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
Query 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 300
GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA
Sbjct 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 300
Query 301 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG 360
GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG
Sbjct 301 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG 360
Query 361 GQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 402
GQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL
Sbjct 361 GQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 402
>gi|167967462|ref|ZP_02549739.1| hypothetical protein MtubH3_05262 [Mycobacterium tuberculosis
H37Ra]
gi|254548868|ref|ZP_05139315.1| hypothetical protein Mtube_00115 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|297733544|ref|ZP_06962662.1| hypothetical protein MtubKR_20735 [Mycobacterium tuberculosis
KZN R506]
gi|313660875|ref|ZP_07817755.1| hypothetical protein MtubKV_20730 [Mycobacterium tuberculosis
KZN V2475]
Length=382
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/382 (99%), Positives = 382/382 (100%), Gaps = 0/382 (0%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
+LGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD
Sbjct 1 MLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 60
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG
Sbjct 61 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 120
Query 141 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPP 200
IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPP
Sbjct 121 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPP 180
Query 201 KLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFPEFPAIPGFPALPGLPSI 260
KLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFPEFPAIPGFPALPGLPSI
Sbjct 181 KLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFPEFPAIPGFPALPGLPSI 240
Query 261 PNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVG 320
PNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVG
Sbjct 241 PNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVG 300
Query 321 QVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAE 380
QVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAE
Sbjct 301 QVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAE 360
Query 381 AERAPIDAGTAASQRGQEGTVL 402
AERAPIDAGTAASQRGQEGTVL
Sbjct 361 AERAPIDAGTAASQRGQEGTVL 382
>gi|31795038|ref|NP_857531.1| hypothetical protein Mb3894 [Mycobacterium bovis AF2122/97]
gi|121639782|ref|YP_980006.1| hypothetical protein BCG_3927 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224992277|ref|YP_002646967.1| hypothetical protein JTY_3929 [Mycobacterium bovis BCG str. Tokyo
172]
16 more sequence titles
Length=418
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/418 (96%), Positives = 400/418 (96%), Gaps = 16/418 (3%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA
Sbjct 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL
Sbjct 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK
Sbjct 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
Query 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGF- 239
FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGF
Sbjct 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
Query 240 -----------PGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTE 288
PGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTE
Sbjct 241 GFPSLPGFPGLPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTE 300
Query 289 LAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQ 348
LAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQ
Sbjct 301 LAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQ 360
Query 349 QAQLISSQAQQGGQQHATLVSDKKED----EEGVAEAERAPIDAGTAASQRGQEGTVL 402
QAQLISSQAQQGGQQHATLVSDKKED GVAEAERAPIDAGTAASQRGQEGTVL
Sbjct 361 QAQLISSQAQQGGQQHATLVSDKKEDEEGAAAGVAEAERAPIDAGTAASQRGQEGTVL 418
>gi|289445466|ref|ZP_06435210.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289418424|gb|EFD15625.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=391
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/406 (95%), Positives = 385/406 (95%), Gaps = 19/406 (4%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA
Sbjct 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL
Sbjct 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK
Sbjct 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
Query 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFP
Sbjct 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFP--------- 231
Query 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 300
AIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA
Sbjct 232 ------AIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 285
Query 301 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG 360
GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG
Sbjct 286 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQG 345
Query 361 GQQHATLVSDKKED----EEGVAEAERAPIDAGTAASQRGQEGTVL 402
GQQHATLVSDKKED GVAEAERAPIDAGTAASQRGQEGTVL
Sbjct 346 GQQHATLVSDKKEDEEGAAAGVAEAERAPIDAGTAASQRGQEGTVL 391
>gi|308406274|ref|ZP_07669561.1| hypothetical protein TMLG_00359 [Mycobacterium tuberculosis SUMu012]
gi|308363927|gb|EFP52778.1| hypothetical protein TMLG_00359 [Mycobacterium tuberculosis SUMu012]
Length=351
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/351 (97%), Positives = 342/351 (98%), Gaps = 0/351 (0%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA
Sbjct 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL
Sbjct 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK
Sbjct 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
Query 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP
Sbjct 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
Query 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 300
GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA
Sbjct 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFA 300
Query 301 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQ 351
GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP + + +
Sbjct 301 GLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPPNWPAWAANKRN 351
>gi|240168343|ref|ZP_04747002.1| hypothetical protein MkanA1_03462 [Mycobacterium kansasii ATCC
12478]
Length=434
Score = 592 bits (1525), Expect = 5e-167, Method: Compositional matrix adjust.
Identities = 326/422 (78%), Positives = 351/422 (84%), Gaps = 28/422 (6%)
Query 3 SGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAE 62
GS LCK TSNFIWGQLLLLGEGIPDPGD+FN+G++LFKQISDK+GLAIPGTNWIGQAA+
Sbjct 2 KGSDLCKNTSNFIWGQLLLLGEGIPDPGDVFNSGATLFKQISDKIGLAIPGTNWIGQAAD 61
Query 63 AYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEK 122
AYLNQNIAQQLRA+VMGD+D LTGNMISNQAKYVS+TRDVLRAMKKMIDGVYKVCKGLEK
Sbjct 62 AYLNQNIAQQLRAKVMGDIDSLTGNMISNQAKYVSNTRDVLRAMKKMIDGVYKVCKGLEK 121
Query 123 IPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFP 182
+PLLG LWSWELA+PMSGIAMA VGGALLYLTIMTLMN TNL+G+LGRLIEMLTTLPKFP
Sbjct 122 VPLLGWLWSWELALPMSGIAMATVGGALLYLTIMTLMNVTNLKGLLGRLIEMLTTLPKFP 181
Query 183 GLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLF------------ 230
GLP LPS+PDIIDGLWPPKLPDIPIPGLP+IPGLPDFKWPP PG P F
Sbjct 182 GLP-LPSIPDIIDGLWPPKLPDIPIPGLPNIPGLPDFKWPPVPGIPDFNLPIPGLPEFEW 240
Query 231 ------PD--LPSFPGFPGFPEFPA--IPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDL 280
PD LP+ PG PG P FP IPGFP LPGLPSIPNLFPGLP LGDL+PG+G+L
Sbjct 241 PSIPGLPDFGLPNLPGLPGLPSFPGLPIPGFPNLPGLPSIPNLFPGLPSLGDLIPGIGNL 300
Query 281 GKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPS 340
GKLPTWTELAALPDFLGGFAGLPSL F +L+SFA LP V +TATMGQLQ LVAAGGGP
Sbjct 301 GKLPTWTELAALPDFLGGFAGLPSLSFSDLMSFAQLPNVSSLTATMGQLQHLVAAGGGPG 360
Query 341 QLASMGSQQAQLISS-QAQQGGQQHATLVSDKK----EDEEGVAEAERAPIDAGTAASQR 395
QL SM QQAQ+ISS Q G QQ ATLVSDK+ E A AERAPIDAG A Q+
Sbjct 361 QLGSMAGQQAQMISSQAQQGGQQQQATLVSDKREEDEEGAAAGAGAERAPIDAGAAGGQQ 420
Query 396 GQ 397
Q
Sbjct 421 RQ 422
>gi|183985410|ref|YP_001853701.1| hypothetical protein MMAR_5439 [Mycobacterium marinum M]
gi|183178736|gb|ACC43846.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=418
Score = 575 bits (1481), Expect = 6e-162, Method: Compositional matrix adjust.
Identities = 310/419 (74%), Positives = 343/419 (82%), Gaps = 23/419 (5%)
Query 3 SGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAE 62
GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGS+LFK I+DKMGLAIPGTNW+GQAA+
Sbjct 4 KGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSTLFKGIADKMGLAIPGTNWLGQAAD 63
Query 63 AYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEK 122
AYLNQNIAQ+LRA+VMGD+D LTGN+ISNQA+YVS+TRDVLRAMKKMIDGVYKVCKGLEK
Sbjct 64 AYLNQNIAQELRAKVMGDVDYLTGNLISNQAEYVSNTRDVLRAMKKMIDGVYKVCKGLEK 123
Query 123 IPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFP 182
+P+LG LWSWELA+PMSGIAMA VGGALLYLTIMTLMN TNL+G+LGRL+EML +LP
Sbjct 124 VPILGWLWSWELALPMSGIAMATVGGALLYLTIMTLMNLTNLKGLLGRLVEMLASLPSLI 183
Query 183 GLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPT----------PGSPLFPD 232
G LP++P IID LWPPKLPD+PIPGLP+IPGLPDF WPP PG P F +
Sbjct 184 G-GLLPNIPGIIDDLWPPKLPDLPIPGLPNIPGLPDFTWPPKIDIPDWNLPIPGLPGF-E 241
Query 233 LPSFPGFPG----FPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTE 288
P G PG FP P +P FP+LPGLPSIP+LFPGLPGLGDL G+G G LPTWT+
Sbjct 242 FPPTSGIPGIDFPFPNIPGLPSFPSLPGLPSIPDLFPGLPGLGDLFSGIGKWGTLPTWTD 301
Query 289 LAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQ 348
LAALPDFLGGFAGLPSL F NLL FA LP VG +TATMGQLQ LV+A GGP QL SM Q
Sbjct 302 LAALPDFLGGFAGLPSLSFSNLLGFAQLPNVGSLTATMGQLQHLVSAAGGPGQLGSMAGQ 361
Query 349 QAQLISSQAQQGGQQHATLVSDKKEDEEG-----VAEAERAPIDAGTAASQRGQEGTVL 402
QA +ISSQA QGGQQ ATLVSDKKED+E A AERAPIDAG+ Q G EGT+L
Sbjct 362 QASMISSQASQGGQQ-ATLVSDKKEDDEDGAAAGSAGAERAPIDAGSNTGQ-GNEGTLL 418
>gi|294995551|ref|ZP_06801242.1| hypothetical protein Mtub2_13827 [Mycobacterium tuberculosis
210]
Length=279
Score = 535 bits (1377), Expect = 6e-150, Method: Compositional matrix adjust.
Identities = 279/279 (100%), Positives = 279/279 (100%), Gaps = 0/279 (0%)
Query 124 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPG 183
PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPG
Sbjct 1 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPG 60
Query 184 LPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFP 243
LPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFP
Sbjct 61 LPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFP 120
Query 244 EFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLP 303
EFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLP
Sbjct 121 EFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLP 180
Query 304 SLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQ 363
SLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQ
Sbjct 181 SLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQ 240
Query 364 HATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 402
HATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL
Sbjct 241 HATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 279
>gi|339296669|gb|AEJ48780.1| hypothetical protein CCDC5079_3591 [Mycobacterium tuberculosis
CCDC5079]
Length=287
Score = 504 bits (1299), Expect = 8e-141, Method: Compositional matrix adjust.
Identities = 255/271 (95%), Positives = 256/271 (95%), Gaps = 0/271 (0%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA
Sbjct 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL
Sbjct 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK
Sbjct 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
Query 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP
Sbjct 181 FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP 240
Query 241 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLG 271
GFPEFPAIP P + L P L G G
Sbjct 241 GFPEFPAIPRVPRTARVAQHSQLVPRLAGSG 271
>gi|240172060|ref|ZP_04750719.1| hypothetical protein MkanA1_22280 [Mycobacterium kansasii ATCC
12478]
Length=394
Score = 439 bits (1130), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 233/389 (60%), Positives = 280/389 (72%), Gaps = 17/389 (4%)
Query 22 LGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGDL 81
+G G+PDPGDIF TGSSL +Q+SDKM LAIPG NWIG +A AY +QN+AQQLR + M D+
Sbjct 1 MGSGVPDPGDIFTTGSSLLRQVSDKMELAIPGANWIGASAAAYSSQNLAQQLRTKAMSDI 60
Query 82 DKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSGI 141
DKL GN++SNQA+++ D R VL AM M++GV K CK LEK+PL+G S LA+P G
Sbjct 61 DKLAGNLVSNQARHIRDARKVLSAMITMVNGVRKACKKLEKVPLVGKGLSLALAVPPCGT 120
Query 142 AMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPPK 201
AM+VVGGALLYLT+ T+ N NL+G+LGRLIEMLT LPKF GLP LP +P + + WPPK
Sbjct 121 AMSVVGGALLYLTLTTMNNVMNLKGLLGRLIEMLTALPKFAGLPKLP-IPGLPEIAWPPK 179
Query 202 LPDIPIPGLPDIPGLPDFKWPPTPGSPLF----PDLPSF--PGFPGFPEFP------AIP 249
LP+IPIPGLP IPGLP+F WPPTPG+P F P LP F P PGFP+F IP
Sbjct 180 LPEIPIPGLPSIPGLPEFNWPPTPGAPDFTLPIPGLPEFQWPSMPGFPQFNWPRPGFPIP 239
Query 250 GFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGN 309
GFP LPGLP+IP++FPGLPGL DLL GVG LG+LPTW E+A+LP+FL GFAGLPSL FG
Sbjct 240 GFPGLPGLPTIPDVFPGLPGLDDLLSGVGILGRLPTWVEVASLPEFLAGFAGLPSLDFGE 299
Query 310 LLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVS 369
LLSFA LP VGQ+T TM QL QL +AGG S + +M QQ +ISS A+Q G L
Sbjct 300 LLSFAQLPAVGQLTETMNQLAQLASAGGHSSNIVNMAGQQTPMISSLARQSGPPQGILGV 359
Query 370 DK----KEDEEGVAEAERAPIDAGTAASQ 394
D + D A ERAPID + +Q
Sbjct 360 DTDNEVRTDAAAGATVERAPIDTASDGTQ 388
>gi|289748397|ref|ZP_06507775.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289688984|gb|EFD56413.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=174
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA
Sbjct 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL
Sbjct 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEM 174
EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEM
Sbjct 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEM 174
>gi|339296670|gb|AEJ48781.1| hypothetical protein CCDC5079_3592 [Mycobacterium tuberculosis
CCDC5079]
Length=123
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/123 (99%), Positives = 123/123 (100%), Gaps = 0/123 (0%)
Query 280 LGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP 339
+GKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP
Sbjct 1 MGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP 60
Query 340 SQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEG 399
SQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEG
Sbjct 61 SQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEG 120
Query 400 TVL 402
TVL
Sbjct 121 TVL 123
>gi|240170265|ref|ZP_04748924.1| hypothetical protein MkanA1_13213 [Mycobacterium kansasii ATCC
12478]
Length=460
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 163/415 (40%), Positives = 213/415 (52%), Gaps = 54/415 (13%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + G L LG+G PD GD S+F +S ++ IP W G AA+A
Sbjct 77 GSVVCYVTWCALGGMLGWLGDGSPDAGDRLVASGSVFDDVSAQIAALIPDGGWQGLAAQA 136
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y+ QN+AQ RA++MGDLD+L G ++S QA VSDTR L + V C LE+
Sbjct 137 YVGQNLAQSQRAKMMGDLDRLAGGLVSAQAPAVSDTRRWLLYEMITVAAVGVGCLALEEF 196
Query 124 -PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK-- 180
G S +A+ + A+ V ++ L T NATNL+G+ RL M TT P
Sbjct 197 GGPAGQQASLAVAVVVCAAALGVAIDKMVSLKNTTSQNATNLQGLTQRLTAMATTSPTPS 256
Query 181 --FPGLPGLPSLPD------IIDGLWP-PKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFP 231
PGLP +PS P + D P P+ PD+ + L D+PG P P
Sbjct 257 TPIPGLPDVPSSPTSSPTAGLPDDTGPRPETPDVGV-VLADLPGSPGVD---------VP 306
Query 232 DLPSFPGFPGFPEFPA--IPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTEL 289
DLPS PGFP+F A +P P L G+P++PN PGLP +PT E
Sbjct 307 DLPS----PGFPDFGARHLP-IPTLTGMPNLPNALPGLP-------------TVPTADEF 348
Query 290 AALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQ 349
AALPD G A +P LS A+LPT+ Q+ +GQL L A G QLA+M QQ
Sbjct 349 AALPDLSGALAAVPG------LSLANLPTMAQLATPLGQLSGLSGAASGLGQLATMAGQQ 402
Query 350 AQLISSQAQQGGQQHATLVSDKKEDEE------GVAEAERAPIDAGTAASQRGQE 398
AQ+IS+ AQQ QQH TL D++ G A +RAPID T+ SQ GQ+
Sbjct 403 AQMISALAQQSTQQHTTLTHQVTPDDDTPGADAGTANGQRAPIDTATSPSQPGQQ 457
>gi|240170262|ref|ZP_04748921.1| hypothetical protein MkanA1_13198 [Mycobacterium kansasii ATCC
12478]
Length=434
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/410 (38%), Positives = 199/410 (49%), Gaps = 36/410 (8%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + G L LG+G PD GD F ++F ++S ++ +P W G AA+A
Sbjct 43 GSVICLVTELVLGGVLPWLGDGSPDGGDRFAGSRAMFDRVSGQIAALVPDGGWQGSAAQA 102
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLE-K 122
Y +N+AQ ++M DLD G ++SNQA+ V R V+ I + C E
Sbjct 103 YSTRNLAQSQHTKMMRDLDYQIGQLVSNQAEAVERVRSVVITEMVAIGCTFAFCIYCEAT 162
Query 123 IPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF- 181
+ G + S A + A+AVV G L+ L I T NA+ R + +L EMLT LP
Sbjct 163 MGPAGKILSRRTATVICAFALAVVVGFLIDLAIRTSRNASKARAMTQKLTEMLTRLPALS 222
Query 182 ---PGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWP---PTPGSPLFPDLPS 235
G P + LP P + +P P I GL D P T S +F DLP
Sbjct 223 RPMSGSPDMAFLP----SYSPSEYHTLP----PTIAGLLDVNAPLPQTTDVSLVFADLPG 274
Query 236 FPGFPGFPEFPAIPGFPAL--PGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
P F G P PA PGFP P +P IP+L G+P L D+ P L +PT +L ALP
Sbjct 275 APEF-GVPNLPA-PGFPDFGAPHMP-IPHLT-GMPTLPDVSP--DGLPMVPTNNDLVALP 328
Query 294 DFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLI 353
F A PS G A LP + Q TA QL L A G QLA+ QQAQ+I
Sbjct 329 GFADALATPPSRG------LAKLPAMAQATAPPSQLTGLSGAASGLGQLANTAGQQAQMI 382
Query 354 SSQAQQGGQQHATLVSDKKEDEEGVAEAE------RAPIDAGTAASQRGQ 397
SS AQQG QQHAT +D++ V A R P+D T +SQ Q
Sbjct 383 SSLAQQGAQQHATRTGHATQDDDTVGAAADTTTAGRVPVDTATGSSQARQ 432
>gi|240170266|ref|ZP_04748925.1| hypothetical protein MkanA1_13218 [Mycobacterium kansasii ATCC
12478]
Length=427
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/418 (37%), Positives = 209/418 (50%), Gaps = 61/418 (14%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + G LLG+G PDPGD +F +S ++ IP W G AA++
Sbjct 45 GSSVCGWTIRGLSGLQPLLGDGSPDPGDRLAASGPMFADVSARIAALIPDDGWQGLAAQS 104
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y QN+AQ RA++MGDLD+ TG ++S QA+ + V+ A + + G + C E
Sbjct 105 YSAQNLAQSQRAKMMGDLDRRTGELVSAQAEAIQRVYYVVVAERLAVAGTFAFCIYYEVT 164
Query 124 --PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF 181
P G + S+++A+ + +A+ V+ G L+ L I T NA +L+ +L +MLT LP
Sbjct 165 GGP-AGQILSFQVAVAVCTVAIIVLSGFLIDLWITTSQNAIDLQAATQKLTDMLTMLPTL 223
Query 182 PG-LPGLPSLPDIIDGLWPP----------KLPDI--PIPGLPDIPGLPDFKWPPTPGSP 228
+PGLP DG PP +L D P+P PDI + PGS
Sbjct 224 SDTIPGLP------DGALPPSHTRPEFDAARLLDFTGPLPETPDI----SLAFADLPGSL 273
Query 229 LFPDLPSFPGFPGFPEF--PAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTW 286
F +LP+ P PGFP+F P +P P L G+P++P+ F G G L ++PT
Sbjct 274 EF-NLPTLPS-PGFPDFGAPHLP-IPQLTGMPTLPDPFCGADG----------LPRVPTA 320
Query 287 TELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMG 346
ELAA PDF G AG LP + Q+TA +L L A GG SQL +
Sbjct 321 NELAASPDFSGALAG--------------LPIMAQLTAPFSRLTGLPGAAGGLSQLTNTA 366
Query 347 SQQAQLISSQAQQGGQQHA------TLVSDKKEDEEGVAEAERAPIDAGTAASQRGQE 398
QQAQ+ISS QQG + A T D G A R P+DA T SQ+GQ+
Sbjct 367 GQQAQMISSLTQQGARPQAPPADQVTRDGDTAGAAAGTPGARRVPVDAATDPSQQGQQ 424
>gi|240170263|ref|ZP_04748922.1| hypothetical protein MkanA1_13203 [Mycobacterium kansasii ATCC
12478]
Length=379
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/389 (36%), Positives = 199/389 (52%), Gaps = 45/389 (11%)
Query 38 SLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVS 97
S F ++ D++ +P W G AA+AYL+QN+AQ RA+V+ DLD TG+++S QA+ V
Sbjct 5 SKFDEVGDRIAALVPDGGWQGLAAQAYLSQNLAQSQRAKVIRDLDHQTGDLVSAQAQAVV 64
Query 98 DTRDVLR---AMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLT 154
+ R+ + + GV C+ P G + S+++A+ M A+A+V L+ L
Sbjct 65 NAREAANIGMVIAGIALGVCATCEATMGPP--GQILSFQIALFMCSPAVALVVVFLIELA 122
Query 155 IMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGL---- 210
+ NA+ L+ + RL +++T+LP G +P + D +PP P G
Sbjct 123 VAASQNASKLQAMTQRLTDLVTSLPTRSG-----PIPGLTDSTFPPAHPRSEFDGADPVV 177
Query 211 -PDIPGLPDFKWP------------PTPGSPLF--PDLPSFPGFPGFPEF--PAIPGFPA 253
P I GLPD P PGS F P+LPS PGFP+F P +P P
Sbjct 178 PPTIAGLPDDTAPRPETPDICLALADLPGSLEFSVPNLPS----PGFPDFGAPHLP-IPQ 232
Query 254 LPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSF 313
L G+PS+PN G P L D+ G + +PT EL ALP A +PSL NL +
Sbjct 233 LAGMPSLPNSSTGRPNLADVF--AGGMSNVPTADELPALPGLAEALAAMPSLNLANLATM 290
Query 314 ASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKE 373
S P + Q+ A++ QL L A GG QLA+ ++QAQ+ISS QQG QQ L +
Sbjct 291 TSQPAMAQLAASLSQLTGLSGAAGGLGQLANTAARQAQMISSVTQQGVQQ---LTTPADH 347
Query 374 DEEGVAEAE----RAPIDAGTAASQRGQE 398
D G A R P+DA T SQR Q+
Sbjct 348 DIAGAATGTPTELRVPVDAATGTSQRRQQ 376
>gi|240168062|ref|ZP_04746721.1| hypothetical protein MkanA1_02012 [Mycobacterium kansasii ATCC
12478]
Length=432
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/411 (37%), Positives = 201/411 (49%), Gaps = 66/411 (16%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + + G L LG PDPGD S+F +S + P W G AA+A
Sbjct 70 GSVVCFGTFSALAGMLGWLGHASPDPGDRLVASGSMFDDVSAHIAALGPDGGWQGSAAQA 129
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
YL Q +AQ RA++M DLD+ T ++S QA+ V+DTR L ++ V C LE+
Sbjct 130 YLAQILAQSQRAKLMRDLDRRTRGLVSTQAQAVADTRAWLIHEMIIVAAVGISCLALEES 189
Query 124 PLL-GHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF- 181
L G S +A+ + A+ V L++L T NA NL+G+ RL + TT P
Sbjct 190 GLPGGQQVSLAVAVVVCTAALGVAIYKLVWLKHTTSQNAHNLQGLTQRLTAIATTSPTLP 249
Query 182 ---PGLPGLPSLPDII----DGLWP-PKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDL 233
PGLP +P+ P I D P PK PDI + L D+ G P+F DL
Sbjct 250 DAIPGLPDVPAAPSPITGPPDDTGPLPKTPDISL-ALADLTGSPEFS---------VSDL 299
Query 234 PSFPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
P PGFP+F G PGL +P V L T +ELAALP
Sbjct 300 PR----PGFPDF--------------------GAPGLA--IPEVAGLPHPATASELAALP 333
Query 294 DFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLI 353
DF G + A++PT+ Q+TA +GQL L A GG SQL +M QQAQ+I
Sbjct 334 DFSG--------------ALAAVPTMAQLTAALGQLTGLSGAAGGLSQLTTMAGQQAQMI 379
Query 354 SSQAQQGGQQHATLVSDKKEDEEG------VAEAERAPIDAGTAASQRGQE 398
S+ AQQG QQHA+L +D++ AE AP+D + + QR Q
Sbjct 380 SALAQQGTQQHASLADQVTKDDDNAGAAAGATTAEHAPVDDASRSLQRRQR 430
>gi|240170261|ref|ZP_04748920.1| hypothetical protein MkanA1_13193 [Mycobacterium kansasii ATCC
12478]
Length=408
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/406 (35%), Positives = 201/406 (50%), Gaps = 43/406 (10%)
Query 3 SGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAE 62
+GSGLC T + LL LG PD GD F ++F +S ++ +P W G AA+
Sbjct 25 AGSGLCVGTELLLGTVLLGLGVKTPDTGDRFVASRAIFDDVSAQIAALVPDGGWQGSAAQ 84
Query 63 AYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLE- 121
AYL QN+AQ RA++MGDLD L+G+++S QA+ + + R V+ + + + +C E
Sbjct 85 AYLAQNLAQSQRAKLMGDLDHLSGDLVSAQAETIQNARTVVFLIMVFVGFLLVICVTAEL 144
Query 122 KIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF 181
G + S++LA+ +A++ V L++L I T N NL+ + L + +T LP
Sbjct 145 NGGPAGQILSYQLALKGCTLALSAVDACLVWLMITTSRNTRNLQILAQELTDTMTRLPTL 204
Query 182 ----PGLPGLPSLPDIIDGLWPPKLP--DIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPS 235
PG P + P G P + D +P IPG PD P + PD+ S
Sbjct 205 SDPVPGSPDVSFHP----GHSPSDVETADHTVPAT--IPGPPDDNAP----TAETPDVAS 254
Query 236 -FPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPD 294
F PG PEF ++P LP+ PG P LG V L +P+ +L PD
Sbjct 255 AFAHLPGSPEF-------SMPDLPT-----PGFPDLGTPYLRVPQLAGMPSLGDLFCSPD 302
Query 295 FLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLIS 354
G+ L N + S PT+ +TA + QL L A G S+LA+ QQAQ+IS
Sbjct 303 ------GMHGLDLANPTT-TSQPTMAPLTARLSQLTGLSGAASGLSRLANTAGQQAQMIS 355
Query 355 SQAQQGGQQHATLVSDKKEDEEGVAEAE------RAPIDAGTAASQ 394
S A QG QQHATL D++ V A RAP+D T +SQ
Sbjct 356 SLAGQGAQQHATLAGHATRDDDTVVAAADTTTAGRAPVDTATGSSQ 401
>gi|240170271|ref|ZP_04748930.1| hypothetical protein MkanA1_13243 [Mycobacterium kansasii ATCC
12478]
Length=360
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/392 (34%), Positives = 194/392 (50%), Gaps = 72/392 (18%)
Query 39 LFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSD 98
+ +S ++ +P + W G AA+AY+ N AQ A+ M LD+LTG++I+ QA+ V
Sbjct 1 MLDDVSAQIAALVPDSGWQGSAAQAYVAHNHAQSQHAKTMAALDRLTGDLIAAQARTVLT 60
Query 99 TRDVLRAMKKMIDGVYKVCKGLEKI--PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIM 156
R ++ ++ C LE + P G S LA + GIA+AV+ GA++ L +
Sbjct 61 ARRIVIVAAGVVAATGLCCLALETLGGPA-GQGQSLILAKVVCGIALAVLAGAVVNLIVT 119
Query 157 TLMNATNLRGILGRLIEMLTTLPKF----PGLPGLPS-------------------LPDI 193
T NA ++ + L +++T LP+ PG PG S L +
Sbjct 120 TFQNAGKVQALTSELADIVTRLPELSDPIPGSPGAFSPRSGSASGFNATDHSGSLTLARV 179
Query 194 IDGLWP-PKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFPEFPAIPGF- 251
+D P+ PD+ + L D+PG P+F P G PGFP+F A P
Sbjct 180 LDDTVTLPETPDVCL-ALADLPGSPEFSVPDLAG-------------PGFPDFGA-PDLT 224
Query 252 -PALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNL 310
P L G+PS+P++FPG L +PT E AALPD G AGL
Sbjct 225 TPTLTGMPSVPDVFPG------------GLPAIPTADESAALPDVSGARAGL-------- 264
Query 311 LSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVSD 370
A+LPT+ Q+ A + L L A GG SQL+++ +QQAQ+ISS AQQ QQ ATL
Sbjct 265 -GPANLPTIAQLAAPLSALSGLSGATGGLSQLSNLAAQQAQMISSLAQQSAQQPATLADQ 323
Query 371 KKEDEE------GVAEAERAPIDAGTA-ASQR 395
++++ G A+RAP+DA T+ A QR
Sbjct 324 VTQNDDTVGAAAGTPTAQRAPVDAATSPAPQR 355
>gi|240167908|ref|ZP_04746567.1| hypothetical protein MkanA1_01240 [Mycobacterium kansasii ATCC
12478]
Length=450
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 147/404 (37%), Positives = 197/404 (49%), Gaps = 41/404 (10%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + L LLG+G PDPGD S+F ++S ++ +PG W G AA+A
Sbjct 66 GSVICAETEVLLGVVLALLGQGRPDPGDRLVASRSMFNEVSAQIEALVPGGGWQGSAAQA 125
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y+ N+AQ RA++M DLD L +++S Q V R + A+ + + C LE+
Sbjct 126 YVAHNLAQSQRAKLMRDLDHLAADLVSAQGDLVEKIRYFVIALLGGVGLLGAYCFYLEQF 185
Query 124 P-LLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF- 181
G L S ++A M + + L + I T NA+NL+ RL M+TTLP
Sbjct 186 EGAPGRLLSLQIASLMFLFVITSLLSVLGFFAIATYRNASNLQAATQRLTHMVTTLPSLS 245
Query 182 ---PGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWP--PTPGSPL-FPDLPS 235
P LP P P + + P + GLPD K P TP L F DLP
Sbjct 246 DTNPRLPDAPFPPADPRSEFDAAEHSLVSP----VAGLPDDKAPTAETPDVSLAFADLPG 301
Query 236 FPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDF 295
P F P P+ PGFP G P +P +P + L LPT ELAALPD
Sbjct 302 SPEF-SMPTLPS-PGFPDF-GAPHLP------------IPTLAGLAILPTADELAALPDL 346
Query 296 LGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISS 355
G AG P L A+L T+ Q+ A + QL L A GG SQL ++ QQAQ+ISS
Sbjct 347 SGALAGEPGL--------ANLSTMAQLAAPLSQLSGLSGAAGGLSQLTNIAGQQAQMISS 398
Query 356 QAQQGGQQHATLVSDKKEDEE------GVAEAERAPIDAGTAAS 393
AQQG QQHA L ++D+ G E AP+DA T ++
Sbjct 399 LAQQGAQQHAALADQVRKDDHNDGAAAGTTTTEPAPVDAATGSA 442
>gi|183985393|ref|YP_001853684.1| hypothetical protein MMAR_5422 [Mycobacterium marinum M]
gi|183178719|gb|ACC43829.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=414
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 139/425 (33%), Positives = 184/425 (44%), Gaps = 98/425 (23%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
G+ +C T + G L LG G+PD GD ++F + ++ P W G AA A
Sbjct 53 GTLVCGVTLGALGGALAWLGNGLPDVGDALARSGAMFDRAGAQISALGPDAGWQGTAAAA 112
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y+ QN AQ A +M DLD+L ++S+QA V RDV+ ++ ++ C E
Sbjct 113 YVAQNQAQSQHAGLMADLDRLAAELVSSQAHGVETARDVVILEILVVMILFGACVVFELE 172
Query 124 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF-- 181
G L S+++AIP+ G A+AV G L+ L + T A++L+ + RL M+ LP++
Sbjct 173 GPAGQLLSFKIAIPICGAALAVAAGFLIDLAVRTSGKASSLQAVTQRLTAMVAALPRWCD 232
Query 182 --PGLPGL----PSLP---DIIDGLWP-PKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFP 231
PG P + P P D+ D P PD P L D+PG P+F P
Sbjct 233 IIPGAPEVALPQPHCPAGFDVADETARGPHTPD-PRAALADLPGSPEFNAPSVAA----- 286
Query 232 DLPSFPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAA 291
PGFP+F G P LP IP L G+P A
Sbjct 287 --------PGFPDF----GAPHLP----IPQL-AGMP----------------------A 307
Query 292 LPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQ 351
LPD G A LP T+ QL L SQLA+ +Q AQ
Sbjct 308 LPDLSGVLANLP---------------------TLRQLSSLTGPTSAISQLANTATQHAQ 346
Query 352 LISSQAQQGGQQHATLV-------SDKKEDEEGVAE-----------AERAPIDAGTAAS 393
+ISS AQQG QQHATL D D EG ERAPIDA T +
Sbjct 347 MISSLAQQGAQQHATLADRLTTGHDDDTPDTEGATADTEGATADTTVGERAPIDAETRPN 406
Query 394 --QRG 396
QRG
Sbjct 407 DQQRG 411
>gi|183985392|ref|YP_001853683.1| hypothetical protein MMAR_5421 [Mycobacterium marinum M]
gi|183178718|gb|ACC43828.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=411
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/417 (32%), Positives = 188/417 (46%), Gaps = 80/417 (19%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
+ GS LC T + + G L LG G PD GD +S+F + ++ IPG +W G A
Sbjct 53 LRRGSVLCVVTESLLGGALAWLGNGFPDRGDGLVCSASMFDGVGAQIATLIPGGSWRGSA 112
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
A+AYL QN+AQ A +M DLD+L +++S+QA V R VL A ++ ++ VC
Sbjct 113 AQAYLVQNLAQSRHATLMADLDRLAADLVSSQADAVKTARGVLIAELSLVAVLFTVCVYY 172
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
E G LWS+++A+ G A+AV G L+ + T N +L+ RL +ML LP+
Sbjct 173 EMQGPAGQLWSFKIALAACGAALAVAAGYLVDVAETTWRNGCDLQMATQRLTDMLADLPR 232
Query 181 FPG-----------LPGLPSLPDIIDGLWP-PKLPDIPIPGLPDIPGLPDFKWPPTPGSP 228
G L PS I + P P+ PD P L + G P+F P
Sbjct 233 QAGAVSSSTEVTLPLAHSPSGSAIAEEAAPTPRTPD-PRSALAGLAGSPEFSVPSVAA-- 289
Query 229 LFPDLPSFPGFPGFPEF--PAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTW 286
PGFP+F P +P P L G+P++P+L + L
Sbjct 290 -----------PGFPDFGAPYLP-IPQLAGMPTVPDLSAIVASL---------------- 321
Query 287 TELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMG 346
PT+ Q++ + QL L QLA+
Sbjct 322 ------------------------------PTMAQLSTALRQLNNLTGPTSAIGQLANTA 351
Query 347 SQQAQLISSQAQQGGQQHATLVSD-----KKEDEEGVAEAERAPIDAGTAASQRGQE 398
+Q AQ+IS+ AQQG QQHATL D +G A ERAPIDA T +Q+ +E
Sbjct 352 TQHAQMISTLAQQGAQQHATLADHLTTDQDTPDTDGTATGERAPIDAQTLPNQQQRE 408
>gi|240167905|ref|ZP_04746564.1| hypothetical protein MkanA1_01215 [Mycobacterium kansasii ATCC
12478]
Length=453
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 143/415 (35%), Positives = 192/415 (47%), Gaps = 51/415 (12%)
Query 3 SGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAE 62
SG +C T + G L LG+G PDPG G S+F + ++ +P W G AA+
Sbjct 62 SGHRVCDWTGCGLGGVLAGLGDGSPDPGVELVDGGSMFCDVGAQIAALVPDGGWQGLAAQ 121
Query 63 AYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEK 122
AY+ QN+AQ RA++M DLD T ++S QA+ V + L + V + C LE
Sbjct 122 AYVAQNLAQSHRAKMMADLDHHTAGLVSAQAQTVFNAFAWLIGEIITVATVGRGCYALEM 181
Query 123 I--PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPK 180
P+ G S +A+ + A+ V ++ L T +A L + RL +MLT LP
Sbjct 182 WGGPV-GQEVSLAVALVVCTAAIEVTIYLIVSLLKTTHSHANKLHALTQRLTDMLTRLPA 240
Query 181 F----PGLPGLPSLPDIIDGLW--PPKLPDIPIPGLPDIPGLPDFKWPPTPGSPL-FPDL 233
PGLP P P + + + + GLPD G P T PL F DL
Sbjct 241 LSDPIPGLPDTPLPPSHSESEFDAAEHIFSRTLAGLPDDTGFT----PRTLDVPLVFADL 296
Query 234 PSFPGF-------PGFPEF--PAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLP 284
P P F PGFP+F P +P P L G+PS P LP
Sbjct 297 PGSPEFSVPDVPRPGFPDFGAPDLP-VPRLAGMPSRP--------------------PLP 335
Query 285 TWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLAS 344
E AALPD +G A LPSLG NL PTV Q A++ +L L A GG SQL +
Sbjct 336 AADEFAALPDLVGALAALPSLGVTNL------PTVAQPAASLSRLAGLWGAAGGFSQLTT 389
Query 345 MGSQQAQLISSQAQQGG-QQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQE 398
+ QQA +I+S AQ+ H T G A+R P+DA T SQ+ Q+
Sbjct 390 VAGQQAHMIASLAQRVTPADHVTQDDHTTGAAAGTPTAQRVPVDAETGTSQQRQQ 444
>gi|183985387|ref|YP_001853678.1| hypothetical protein MMAR_5416 [Mycobacterium marinum M]
gi|183178713|gb|ACC43823.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=361
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/272 (36%), Positives = 142/272 (53%), Gaps = 21/272 (7%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T G LLG+G+PDPGD + S+F ++S ++ +PG W G AA+A
Sbjct 41 GSVICDATEYVCVGVRFLLGDGLPDPGDRYAGSGSMFDEVSAQVAALVPGGGWRGCAAQA 100
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y Q++AQ RA++MGDLD+ T ++++ Q+ V+ R V+ + + + C LE
Sbjct 101 YAAQSLAQSARAKMMGDLDRHTRDLVAAQSDAVTRVRSVVITAEVFVACLGVCCLALETQ 160
Query 124 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF-P 182
G S+ LA+ + +A+A + G L+ L + T NA+ ++ L M+T+LP P
Sbjct 161 GPTGQAVSFFLALDLCSVALAALIGGLISLAVTTSRNASGMQDTTQCLTTMMTSLPTLAP 220
Query 183 GLPGLPSLPDIIDGLWPPKLPDIPIPGLPD-------IPGLPDFKWPPTPGSPLFPDLPS 235
+ GLP P + D L PIP +PD +PGLP+F P P SP FPD
Sbjct 221 AVAGLPDEP-LADALADLPNDRQPIPQIPDAAVIFAQLPGLPEFSLPTAP-SPGFPDF-- 276
Query 236 FPGFPGFPEFPAIPGFPALPGLPSIPNLFPGL 267
G P P P L GLP P++F GL
Sbjct 277 -----GAPHLP----IPTLVGLPRQPDVFRGL 299
>gi|240169622|ref|ZP_04748281.1| hypothetical protein MkanA1_09932 [Mycobacterium kansasii ATCC
12478]
Length=379
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 140/409 (35%), Positives = 189/409 (47%), Gaps = 69/409 (16%)
Query 22 LGEGIPDPGDIFNTGSSLFKQISDKMG-LAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LG G PD GD +G+S+F ++ D++ L P W G AA AY QN+AQ R QVM +
Sbjct 5 LGAGFPDRGDGLASGASMFSEVGDRIAALHAPDGGWQGSAARAYSVQNLAQSRRVQVMAE 64
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHL----------- 129
LD+L +M+S QA+ V + R V + + C LE+ +G
Sbjct 65 LDRLAADMVSAQAQVVGNNRLVTGVAQGAVGATALYCLHLEQAAYVGLAAGNIAAALAGL 124
Query 130 -WSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLP 188
S +A+ + G+A+A VGG L+ L + T NAT L + R ++L LP
Sbjct 125 RLSRTVALGVCGLALATVGGFLIDLAVRTSRNATELLVVTRRATDVLAALP--------- 175
Query 189 SLPDIIDGLWPPKLPDIPIPGLPDIPGL---------PDFKWPPTPGSP----LFPDLPS 235
SL D + G+ +P P D+P L PD P PG+P +F DLP
Sbjct 176 SLSDPVPGVADVDIPRSDSPAGFDVPALTLPPSVASSPDVTAP-LPGTPDAVGVFADLPG 234
Query 236 FPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDF 295
P F G P P IPGFP G P +P +P LA LPD
Sbjct 235 SPEFSG-PTSP-IPGFPDF-GAPDMP---------------------IPV---LAGLPDL 267
Query 296 LGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISS 355
GG AGL LG N + P + Q+ A + +L L A GGPSQLA + Q+AQ+IS
Sbjct 268 SGGVAGLAGLGLANPPAVTKPPAMDQLRAALSRLTGLSGAAGGPSQLAGVDDQRAQMISL 327
Query 356 QAQQGGQQHATLVSDKKEDEEGVAEAE------RAPIDAGTAASQRGQE 398
AQQG Q A+ D+ A RAP+DA T Q+ Q+
Sbjct 328 LAQQGVQPGASPADHVTNDDASAGAASGPTGAWRAPVDAATGPPQQPQQ 376
>gi|240170258|ref|ZP_04748917.1| hypothetical protein MkanA1_13178 [Mycobacterium kansasii ATCC
12478]
Length=334
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/379 (35%), Positives = 176/379 (47%), Gaps = 60/379 (15%)
Query 39 LFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSD 98
+F ++ P W G AA AY+ QN+AQ A+++GDL+ L G+++S QA V
Sbjct 1 MFDDAGTQIAALAPDGGWQGSAAHAYVTQNLAQSQHAKLIGDLEHLAGDLVSAQADAVQR 60
Query 99 TRDVLRAMKKMIDGVYKVCKGLEK-IPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMT 157
R V+ + C E + G + S ++A + G+A+AV+ G L+ L I T
Sbjct 61 VRYVVYTEMAAVAAALAFCIYAETTMGPAGQILSSQVAPAVCGVALAVLVGFLIDLWITT 120
Query 158 LMNATNLRGILGRLIEMLTTLPK----FPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDI 213
NA+ + RL +ML TLP PG LP P + LP P I
Sbjct 121 SQNASTAQAATHRLTDMLATLPTPSDPIPGKSHLPCPPADSRSEFEHTLP-------PAI 173
Query 214 PGLPDFKWPPTPGSP----LFPDLPSFPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPG 269
GL D P TP +P +F DLP P F P P+ PGFP G P +P
Sbjct 174 AGLLDNTGP-TPNTPDVSLVFADLPGSPEF-SMPTLPS-PGFPDF-GAPDLP-------- 221
Query 270 LGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQL 329
+P +LAALPD A L A L TV Q+ + QL
Sbjct 222 -------------IP---QLAALPDVSSALA---------CLGLADLSTVAQLAVRLSQL 256
Query 330 QQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEE------GVAEAER 383
+L A G SQL+++ QQAQ+ISS AQQ QQ ATL K+D++ G AE
Sbjct 257 TELSGAASGLSQLSNVAGQQAQMISSLAQQSAQQQATLADHVKKDDDNDGAAGGTTTAEP 316
Query 384 APIDAGTAASQRGQEGTVL 402
AP+DA T S+ +EG VL
Sbjct 317 APVDAATGPSEH-REGRVL 334
>gi|183984585|ref|YP_001852876.1| hypothetical protein MMAR_4618 [Mycobacterium marinum M]
gi|183177911|gb|ACC43021.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=417
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 128/396 (33%), Positives = 173/396 (44%), Gaps = 77/396 (19%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + L LG+G PD GD + F ++S ++ P W G AA+A
Sbjct 75 GSSVCGWTMRLMTALELSLGDGTPDNGDRLAASGAKFDELSAQIAALGPDDGWQGLAAQA 134
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
YL QN+AQ R ++MGDLD T ++S QAK + RDVL + + G + +C E +
Sbjct 135 YLAQNLAQSQRVKLMGDLDHETSQLVSAQAKAIERVRDVLIVERIALIGTFALCLWYELM 194
Query 124 P-LLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKF- 181
G S E+AI +A+ V+ G L+ L T + + L +L +ML TLP
Sbjct 195 DGPEGQALSMEVAIAACAVALIVLSGFLVDLCNTTSQDHSELHSATQKLTDMLATLPTLS 254
Query 182 ---PGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPG-LPD-----FKWPPTPGSPLFPD 232
PGL G P P D P+ + GL D G LP+ PGS F
Sbjct 255 DPGPGLAGAPLPPSQSD-------PEFNVAGLFDRTGQLPEAAEISVALADLPGSVEF-S 306
Query 233 LPSFPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAAL 292
+ + PG PGFP+F G P LP PGL GL PT E AAL
Sbjct 307 VRTLPG-PGFPDF----GAPDLP--------VPGLAGL-------------PTLPEPAAL 340
Query 293 PDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQL 352
A+ P + Q+ A + +L L G ++L + SQQAQL
Sbjct 341 ---------------------ATPPAMAQLAAPLRRLTGLSGKTGALAKLTNTASQQAQL 379
Query 353 ISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDA 388
I A L DK EG +A RAP+ A
Sbjct 380 I-----------AALTHDKPGTAEGPTDAPRAPVGA 404
>gi|183985401|ref|YP_001853692.1| hypothetical protein MMAR_5430 [Mycobacterium marinum M]
gi|183178727|gb|ACC43837.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=397
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/422 (29%), Positives = 179/422 (43%), Gaps = 74/422 (17%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
+ GS +C T + G+L LG PD G G+++F + ++ +P + W G A
Sbjct 29 LRRGSVVCLVTDCILGGELAWLGHASPDQGGCLVKGAAMFDDLGAQIAALVPDSGWQGSA 88
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGL 120
A +Y +AQ + +M DLD+L ++S+QA V R L A + +C G+
Sbjct 89 ARSYGAHTLAQSRHSTLMADLDRLAAELVSSQADDVKQARTALWAAIGFVSVYLLICLGI 148
Query 121 EKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLP- 179
E G L S+ A+ + G + + L L T A++L+ RL +M+ L
Sbjct 149 ELQGPEGQLLSFNFAVVVCGAVLGISALVLHDLAKKTSRRASSLQTTTQRLSDMVAGLAT 208
Query 180 KFPGLPGLP--SLP--------DIID--GLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGS 227
+ +PG P SLP + D PP LPD+ D+PG P+F P G+
Sbjct 209 RSDMIPGSPEMSLPPAHSLSEFHLTDSSAASPPHLPDLD-SAFADLPGAPEFHLPTAAGA 267
Query 228 PLFPDLPSFPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWT 287
LP F G P+ P PAL GLP++P+ P P T
Sbjct 268 ----GLPDF----GAPQLP----IPALSGLPTLPD--PTDP------------------T 295
Query 288 ELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGS 347
+L+++ A LPT+ Q+ A + QL L SQLA+ +
Sbjct 296 DLSSM--------------------LAGLPTITQLPAILSQLNNLAGPTSAVSQLANTAT 335
Query 348 QQAQLISSQAQQGGQQHATLVS--------DKKEDEEGVAEAERAPIDAGTAASQRGQEG 399
Q AQ+IS+ AQQG H TL D + ERAP+D T +Q +
Sbjct 336 QHAQMISTLAQQGAHPHTTLTDHHTTDETPDTDAATAATSSGERAPLDTTTHPTQHRLDH 395
Query 400 TV 401
V
Sbjct 396 IV 397
>gi|183985391|ref|YP_001853682.1| hypothetical protein MMAR_5420 [Mycobacterium marinum M]
gi|183178717|gb|ACC43827.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=338
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/387 (31%), Positives = 161/387 (42%), Gaps = 70/387 (18%)
Query 1 MASGSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA 60
+A GS LC + L LLG PD GD +G S+F +I + +P W G A
Sbjct 16 VAYGSVLCAAAEGVLGVSLALLGVAFPDAGDRLVSGGSMFDEIGTLIAALVPEAGWQGAA 75
Query 61 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTR--DVLRAMKKMIDGVYKVCK 118
+ AY+ Q +AQ RA++MG+LD+L +++S+QA V R + I G Y C
Sbjct 76 SRAYIAQALAQSQRAKLMGELDRLVADLVSSQADAVKAVRYAVAAEMVAVAITGAY--CV 133
Query 119 GLEKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTL 178
E + G L S +A+ + +AM V+ G L+YL T N +L RL +ML L
Sbjct 134 YQEGLGPTGLLLSARVALVVCTLAMLVLVGCLIYLLATTARNTRDLHAAGQRLTDMLALL 193
Query 179 PKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPD--FKWPPTPGSPLFPDLPSF 236
PK L ++P D PP IP +PD + PGSP+F LP
Sbjct 194 PK-----SLDAIPAPADMALPPPPSRCEANATAPIPHIPDATVVFARLPGSPMF-SLPPV 247
Query 237 PGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFL 296
PGFP+F G P LP IP L PT PD
Sbjct 248 -ASPGFPDF----GAPRLP----IPQLV-----------------STPTQ------PDLS 275
Query 297 GGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQ 356
A LP TM QL L +LA+ +Q AQ++S+
Sbjct 276 SVLAKLP---------------------TMTQLNNLTGPTSTVRRLANTVAQPAQMVSAL 314
Query 357 AQQGGQQHATLVSDKKEDEEGVAEAER 383
AQQGG+ ED + ER
Sbjct 315 AQQGGRAPV-----DAEDRSALQHQER 336
>gi|183985400|ref|YP_001853691.1| hypothetical protein MMAR_5429 [Mycobacterium marinum M]
gi|183178726|gb|ACC43836.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=385
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/302 (34%), Positives = 143/302 (48%), Gaps = 25/302 (8%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + G L LG PD GD ++ S+F + ++ P W G AA A
Sbjct 36 GSVVCLGTDGILGGLLAWLGHEFPDQGDRLDSSGSMFDGVIAQIAALGPDGGWQGSAARA 95
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y +N+AQ +M DLD+L ++S QA V R L A+ ++ + VC GLE
Sbjct 96 YGARNLAQSQHTGLMADLDRLAAELVSAQADDVHKVRSTLWALVAIVSVLLVVCIGLELQ 155
Query 124 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFP- 182
G L S+ A+P+ G A+ V AL +L + T NA+ ++ RL M+ L P
Sbjct 156 GPEGQLVSFYSALPICGTALFVAAVALTFLAVTTSRNASAVQAATQRLTAMVAALTTGPD 215
Query 183 GLPGLPSLP----------DIID--GLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLF 230
+PG P +P D+ + G PP+LPD+ D+PG P+F G+
Sbjct 216 AVPGSPEMPTPPKYCLSEFDLAEDTGPTPPQLPDLG-SAFTDLPGAPEFHLATGTGA--- 271
Query 231 PDLPSFPGFPGFPEFPAIPGFPALPG---LPSIPNLFPGLPGLGDLLPGVGDLGKL--PT 285
LP F G P P PA+ G P LPG L + ++ GLP + L + L L PT
Sbjct 272 -GLPDF-GAPQLP-IPALTGLPTLPGPTNLTDLTSVLAGLPTIAQLSTTLSQLTNLAGPT 328
Query 286 WT 287
T
Sbjct 329 ST 330
>gi|183985395|ref|YP_001853686.1| hypothetical protein MMAR_5424 [Mycobacterium marinum M]
gi|183178721|gb|ACC43831.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=346
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (33%), Positives = 131/271 (49%), Gaps = 26/271 (9%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS LC + G L LG G PD G S+F ++S ++ +P W G AA+A
Sbjct 25 GSILCLVNEFSLTGIWLALGLGSPDRGAALVHSGSIFDEVSGRIAALVPEDRWQGLAAQA 84
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEK- 122
Y +QN AQ R Q++ DLD+L ++++ QA ++ R++L ++I Y +C E
Sbjct 85 YTSQNRAQSQRTQLVADLDRLAADLVAAQADAIAAIREILLDEIRIIACTYVICLNCELF 144
Query 123 IPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFP 182
+ G LWS+ +A + +AM VV + YL + + NA +L+ L ML LP
Sbjct 145 MGPQGQLWSFRIATIVCDLAMIVVACCITYLVVTSYQNARSLQAATQSLTGMLAALPMLS 204
Query 183 GLPGLPSLPDIIDGLWPPKLP--DIPIPGL-PDIPGLPDFKWPPTPGSPLFPDLPSFPGF 239
P PD+ +PP + P L P P +PD + +F DLP P F
Sbjct 205 DPPA--GRPDVA---FPPLSSPLEFDAPELTPQTPQMPD-------AASIFADLPGAPEF 252
Query 240 -------PGFPEF--PAIPGFPALPGLPSIP 261
PGFP+F P +P P L G PS+P
Sbjct 253 VLSALPTPGFPDFGAPHLP-IPRLSGTPSMP 282
>gi|183985394|ref|YP_001853685.1| hypothetical protein MMAR_5423 [Mycobacterium marinum M]
gi|183178720|gb|ACC43830.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=401
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/277 (31%), Positives = 124/277 (45%), Gaps = 19/277 (6%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + G L LG G P+ + S F +S ++ P W G AA A
Sbjct 65 GSYVCVATEGILGGALAWLGYGFPERAEGLAGTGSRFGAVSAQIAGLGPEAGWQGSAARA 124
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y QN AQ RA +M +LD+ ++++ QA+ V R V+ + G+ +C E +
Sbjct 125 YGAQNRAQSERATLMSNLDRHIADLVTAQAEDVQAVRSVVTGEMVAVAGLCALCLYCESL 184
Query 124 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPG 183
LGH S +A+ G+ +A+ G L+ L + T NA +LR +L ML LP++P
Sbjct 185 GPLGHEVSLAIALTACGVLLAITIGFLIDLAVTTSRNAGDLRAAEQKLTAMLAALPQWPE 244
Query 184 LPG-------LPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSF 236
G LP P P G +PG P F+ PT SP FPD
Sbjct 245 AIGSSNMAFPLPYSPREAPAATPVARTVDAALGFAQLPGAPGFRL-PTVASPGFPDF--- 300
Query 237 PGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDL 273
G P P P L G+P++P+ P + +L
Sbjct 301 ----GAPHLP----IPRLTGMPTLPDALPTMLSTNEL 329
>gi|308406275|ref|ZP_07669562.1| hypothetical protein TMLG_00360 [Mycobacterium tuberculosis SUMu012]
gi|308363928|gb|EFP52779.1| hypothetical protein TMLG_00360 [Mycobacterium tuberculosis SUMu012]
Length=58
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 345 MGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 402
MGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL
Sbjct 1 MGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQRGQEGTVL 58
>gi|183985402|ref|YP_001853693.1| hypothetical protein MMAR_5431 [Mycobacterium marinum M]
gi|183178728|gb|ACC43838.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=401
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/400 (30%), Positives = 173/400 (44%), Gaps = 73/400 (18%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + L LLGE +P G+ + S+F +S ++ P W G AA A
Sbjct 53 GSVVCGVTEGILGLLLALLGEAVPSRGESLDRSGSMFDGVSTQIATLDPDGGWRGNAARA 112
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y +N+AQ ++ DLD+LTG ++S+QA V RD+L A ++ + VC GLE
Sbjct 113 YGAKNLAQSQHTTLIADLDRLTGELVSSQADAVKRARDLLSAEIWIVLVLLVVCIGLELH 172
Query 124 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLT------- 176
G + S+ +AIP+ +A+ AL L T NA+ ++ RL M
Sbjct 173 GPEGQILSFHIAIPICTMAVFTAATALGVLAATTSQNASAVQAATQRLTAMAAALTTGAD 232
Query 177 TLPKFPGL--PGLPSLPDI----IDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLF 230
T+P P + P + SL + G PP+LPD+ L ++PG P+F G+
Sbjct 233 TVPSSPKMTFPPIHSLSEFDLTEATGPTPPQLPDLQ-STLAELPGAPEFHLATRAGA--- 288
Query 231 PDLPSFPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELA 290
GFP+F G P LP + +L LPT
Sbjct 289 ----------GFPDF----GAPQLP---------------------ITELTGLPT----- 308
Query 291 ALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQA 350
LPD P+ A LPT+ Q++ T+ QL L GP+ S +Q A
Sbjct 309 -LPD--------PTNLTDPTSMLADLPTIAQLSTTLSQLTNL----AGPT---SATTQPA 352
Query 351 QLISSQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGT 390
Q ++ A Q AT D + +ERAP+D T
Sbjct 353 QQHTTPADHRTQDDATNTPDTATATAATSSSERAPLDTQT 392
>gi|183985385|ref|YP_001853676.1| hypothetical protein MMAR_5414 [Mycobacterium marinum M]
gi|183178711|gb|ACC43821.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=381
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/401 (29%), Positives = 169/401 (43%), Gaps = 74/401 (18%)
Query 4 GSGLCKTTSN--FIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAA 61
GS LC T F W L P+ GD +F Q+S ++ +P W G AA
Sbjct 30 GSVLCACTEAVLFAWLIHALAHPTPPEKGDSVVRSGVMFDQLSGQIAALVPEEGWQGIAA 89
Query 62 EAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLE 121
+AY Q +AQ RA++MGDLD+L+ ++++QA+ V R + A+ ++ G VC +E
Sbjct 90 QAYAAQTLAQSQRARLMGDLDRLSAGLVASQAEIVKTVRTGVIALMVIVAGAGAVCLYIE 149
Query 122 KIPLLGHLWSWELAIPMSGI----AMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTT 177
LG W L+ ++G+ A+ G L Y I + N +L+ + RL +M+T
Sbjct 150 GA--LGPA-GWRLSQNIAGVVCIGALTSWFGLLAYGGIASDRNRRSLQVLTQRLTDMMTN 206
Query 178 LPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLP-DIPGLPDFKWPPTPGSPLFPDLPSF 236
LP + G +P + D PP D LP GL + + L
Sbjct 207 LPNWSG-----QVPALADAAVPPSASDGAAQNLPWRTAGLAEDLGAVLQTTDAAMILTGL 261
Query 237 PGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLG--KLPTWTELAALPD 294
PG PG PEF PS P+ PG D G LP T
Sbjct 262 PGLPGSPEF----------SQPSAPS------------PGFADFGAPHLPIPT------- 292
Query 295 FLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLIS 354
AG+P++ G L+ + +VTA +GQL A QQAQ++S
Sbjct 293 ----LAGMPTMPTGGELA-----AMNRVTAALGQLNTAAA-------------QQAQMVS 330
Query 355 SQAQQGGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
S AQQ + +D + ERAP+ T A+Q
Sbjct 331 SLAQQ------RIGADGTGAAASTSTDERAPVTTATGATQH 365
>gi|306778499|ref|ZP_07416836.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
SUMu002]
gi|306786520|ref|ZP_07424842.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
SUMu003]
gi|306790887|ref|ZP_07429209.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
SUMu004]
13 more sequence titles
Length=392
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/419 (30%), Positives = 169/419 (41%), Gaps = 97/419 (23%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH+ S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHVLSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++GILG + E
Sbjct 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGILGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ---------------GGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
L+S+Q Q G + T + G +AERAP++A Q+
Sbjct 327 LVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
>gi|240173316|ref|ZP_04751974.1| ESX-1 secretion-associated protein A, EspA [Mycobacterium kansasii
ATCC 12478]
Length=390
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 85/150 (57%), Gaps = 0/150 (0%)
Query 11 TSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIA 70
T FI G +LLG G+PD G I N+ S F + D +G A PG +W G AAE Y +N
Sbjct 10 TIGFIDGMYVLLGIGVPDDGGIINSALSFFAKALDDLGSAFPGDSWQGSAAENYAGKNKD 69
Query 71 QQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLW 130
Q Q + +LD+ +I++QA V TRDVL ++K ++ V V L IPL+G
Sbjct 70 QLNFFQQLAELDRELQQLIADQANAVEKTRDVLAGVRKGLEFVRPVAVDLTYIPLVGWAM 129
Query 131 SWELAIPMSGIAMAVVGGALLYLTIMTLMN 160
S P+ MAVVGGAL YLT+ TL++
Sbjct 130 SASFQAPICAAGMAVVGGALAYLTVETLIH 159
>gi|31794792|ref|NP_857285.1| hypothetical protein Mb3646c [Mycobacterium bovis AF2122/97]
gi|31620389|emb|CAD95832.1| CONSERVED HYPOTHETICAL ALANINE AND GLYCINE RICH PROTEIN [Mycobacterium
bovis AF2122/97]
Length=392
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/419 (30%), Positives = 168/419 (41%), Gaps = 97/419 (23%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++GILG + E
Sbjct 140 GAMAVVGGALAYLAVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGILGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ---------------GGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
L+S+Q Q G + T + G +AERAP++A Q+
Sbjct 327 LVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
>gi|15843226|ref|NP_338263.1| hypothetical protein MT3718 [Mycobacterium tuberculosis CDC1551]
gi|148824820|ref|YP_001289574.1| hypothetical protein TBFG_13647 [Mycobacterium tuberculosis F11]
gi|253800654|ref|YP_003033655.1| hypothetical protein TBMG_03653 [Mycobacterium tuberculosis KZN
1435]
39 more sequence titles
Length=392
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/419 (30%), Positives = 168/419 (41%), Gaps = 97/419 (23%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++GILG + E
Sbjct 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGILGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ---------------GGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
L+S+Q Q G + T + G +AERAP++A Q+
Sbjct 327 LVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
>gi|121639535|ref|YP_979759.1| hypothetical protein BCG_3680c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224992032|ref|YP_002646721.1| hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Tokyo 172]
gi|121495183|emb|CAL73669.1| Conserved hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224775147|dbj|BAH27953.1| hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Tokyo 172]
Length=392
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/419 (30%), Positives = 168/419 (41%), Gaps = 97/419 (23%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++GILG + E
Sbjct 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGILGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ---------------GGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
L+S+Q Q G + T + G +AERAP++A Q+
Sbjct 327 LVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
>gi|289571853|ref|ZP_06452080.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
T17]
gi|289545607|gb|EFD49255.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
T17]
Length=392
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/419 (30%), Positives = 168/419 (41%), Gaps = 97/419 (23%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFGA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++GILG + E
Sbjct 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGILGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ---------------GGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
L+S+Q Q G + T + G +AERAP++A Q+
Sbjct 327 LVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
>gi|67975065|gb|AAY84560.1| Rv3616c [Integrating expression vector pALE4]
gi|68160255|gb|AAY86710.1| Rv3616c-hismyc [Integrating expression vector pALE2]
Length=412
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/419 (29%), Positives = 167/419 (40%), Gaps = 97/419 (23%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++G LG + E
Sbjct 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGTLGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ---------------GGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
L+S+Q Q G + T + G +AERAP++A Q+
Sbjct 327 LVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
>gi|15610752|ref|NP_218133.1| hypothetical protein Rv3616c [Mycobacterium tuberculosis H37Rv]
gi|148663479|ref|YP_001285002.1| hypothetical protein MRA_3652 [Mycobacterium tuberculosis H37Ra]
gi|167968215|ref|ZP_02550492.1| conserved hypothetical alanine and glycine rich protein [Mycobacterium
tuberculosis H37Ra]
12 more sequence titles
Length=392
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/419 (29%), Positives = 167/419 (40%), Gaps = 97/419 (23%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++G LG + E
Sbjct 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGTLGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ---------------GGQQHATLVSDKKEDEEGVAEAERAPIDAGTAASQR 395
L+S+Q Q G + T + G +AERAP++A Q+
Sbjct 327 LVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
>gi|183985386|ref|YP_001853677.1| hypothetical protein MMAR_5415 [Mycobacterium marinum M]
gi|183178712|gb|ACC43822.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=417
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/401 (29%), Positives = 165/401 (42%), Gaps = 81/401 (20%)
Query 4 GSGLCKTTSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEA 63
GS +C T + L LG G PD GD + +S+F ++ +PG W G AA+A
Sbjct 75 GSLICLGTETLLGSVLTYLGLGFPDSGDDLLSSASMFDGARSQIADLVPGGGWRGAAAQA 134
Query 64 YLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI 123
Y N+AQ RA+++GDLD+LT ++S QA V R ++ A ++ G C E +
Sbjct 135 YAANNLAQSQRAKLIGDLDRLTAGLVSAQADAVKTARWIVGAEMAVVGGTGACCLYWETL 194
Query 124 PLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTL----P 179
G + S ++A+ + IA+A G L L T NA+ L + L E +T L
Sbjct 195 GPAGQVLSLQVALTVCAIALATALGFLFALLSTTSRNASGLHLLTKALAETVTGLLHCSD 254
Query 180 KFPGLPGLPSLPDIIDGLWP----PKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPS 235
+ G+ G P D P+ PD ++ G P+ P P SP F D
Sbjct 255 EIAGVSGAARPPSEFDATHHTASRPETPDT-TDVFANLAGTPELSLPTAP-SPGFADF-- 310
Query 236 FPGFPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDF 295
G P P + L G+PS+P+ FP LP P+ T
Sbjct 311 -----GAPHLPIL----GLAGMPSLPDSFPDLPN--------------PSGT-------- 339
Query 296 LGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISS 355
L G AG + +L Q LA+ +Q+ Q+ISS
Sbjct 340 LAGLAG-----------------------RVARLNQ----------LANTAAQRVQMISS 366
Query 356 QAQQGGQQHATLVSDKKEDEE-----GVAEAERAPIDAGTA 391
AQ G Q T ++ G A ERAP+DA A
Sbjct 367 LAQHGVSQPTTPAKRHPHGQDNAVAAGTAADERAPVDAAAA 407
>gi|341603556|emb|CCC66237.1| conserved hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=401
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/368 (31%), Positives = 152/368 (42%), Gaps = 82/368 (22%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNATN--------------------------LRGILGRLIEM 174
AMAVVGGAL YL + TL+NAT ++GILG + E
Sbjct 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGILGEVWEF 199
Query 175 LTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLP 234
+T L GL L D + G W + GL W +L
Sbjct 200 ITN-----ALNGLKELWDKLTG-W--------------VTGLFSRGW---------SNLE 230
Query 235 SFPGFPGFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALP 293
SF F +PG A GL + LF G GL + + A
Sbjct 231 SF--------FAGVPGLTGATSGLSQVTGLF-GAAGL--------------SASSGLAHA 267
Query 294 DFLGGFAGLPSLG-FGNLLSFASLPTVGQVTATMGQLQQLVAAGGGP-SQLASMGSQQAQ 351
D L A LP+L G F LP++ QV A + Q L GP A Q+Q
Sbjct 268 DSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTR-QALRPRADGPVGAAAEQVGGQSQ 326
Query 352 LISSQAQQ 359
L+S+Q Q
Sbjct 327 LVSAQGSQ 334
>gi|183985399|ref|YP_001853690.1| hypothetical protein MMAR_5428 [Mycobacterium marinum M]
gi|183178725|gb|ACC43835.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=329
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/375 (29%), Positives = 160/375 (43%), Gaps = 69/375 (18%)
Query 27 PDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGDLDKLTG 86
P GD+ ++ S+F +S ++ P W G AA AY +N+AQ +M DLD+L
Sbjct 18 PFRGDVLDSSGSMFDGVSTQIAALGPDGGWQGSAARAYGARNLAQSQHTILMADLDRLAA 77
Query 87 NMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSGIAMAVV 146
++S QA++V RD +R ++ V VC GLE G S+ +A ++ I + +
Sbjct 78 ELVSAQAEHVKFARDFMRIEIGIVSVVLVVCIGLESRGPDGQEVSFYIASFVAAIVLLIA 137
Query 147 GGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPPKLPDIP 206
G + L T ++A++++ + RL M+ GLPS D + G PPK+
Sbjct 138 GVVMYDLAEKTWLSASDMQAVAQRLTAMVA---------GLPSGLDAVAG--PPKI---- 182
Query 207 IPGLPDIPGLPDFKWPPTPGS-PLFPDLPS-FPGFPGFPEFPAIPGFPALPGLPSIPNLF 264
LP +F + + PL PDL S F PG PEF
Sbjct 183 --ALPPTHSRSEFDLADSSAAFPLIPDLGSAFTDLPGAPEF------------------- 221
Query 265 PGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTA 324
L G G A LPDF G P L L +LPT+ Q++
Sbjct 222 -------HLATGAG-----------AGLPDF-----GAPQLPITALTGLPALPTLAQLST 258
Query 325 TMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGVAEA-ER 383
T+ QL L GP+ S +Q AQ ++ A + T D G + ER
Sbjct 259 TLSQLTNL----AGPT---SATTQPAQQHTTPADHRTRDDDTNTPDTDAATAGTTSSGER 311
Query 384 APIDAGTAASQRGQE 398
AP+ + T +Q+ Q+
Sbjct 312 APLGSTTQPTQQHQK 326
>gi|294995473|ref|ZP_06801164.1| hypothetical protein Mtub2_13415 [Mycobacterium tuberculosis
210]
Length=181
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/142 (41%), Positives = 79/142 (56%), Gaps = 0/142 (0%)
Query 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
Query 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
Query 141 IAMAVVGGALLYLTIMTLMNAT 162
AMAVVGGAL YL + TL+NAT
Sbjct 140 GAMAVVGGALAYLVVKTLINAT 161
>gi|289441046|ref|ZP_06430790.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289413965|gb|EFD11205.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=218
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/152 (40%), Positives = 83/152 (55%), Gaps = 0/152 (0%)
Query 11 TSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIA 70
T + I G LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N
Sbjct 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
Query 71 QQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLW 130
Q + DLD+ ++I +QA V TRD+L KK ++ V V L IP++GH
Sbjct 70 HVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHAL 129
Query 131 SWELAIPMSGIAMAVVGGALLYLTIMTLMNAT 162
S P AMAVVGGAL YL + TL+NAT
Sbjct 130 SAAFQAPFGAGAMAVVGGALAYLVVKTLINAT 161
>gi|183985425|ref|YP_001853716.1| hypothetical protein MMAR_5454 [Mycobacterium marinum M]
gi|183178751|gb|ACC43861.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=298
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/200 (33%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query 1 MASGSGLCKTTSNFI---WGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWI 57
+ G+ +C +T + WG LG+ P+ GD + SLF + ++ P W
Sbjct 66 LCRGTVVCASTLTILGVMWG---WLGDSPPEQGDRLASSGSLFDDVGAQVAALDPDGGWR 122
Query 58 GQAAEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVC 117
G AA+AY QN+AQ A +M +LD+LT ++S+QA V R+ L + ++ GV VC
Sbjct 123 GNAAQAYWVQNLAQSRHATLMAELDRLTAGLVSSQADAVKQARERLSVLIAVVLGVLMVC 182
Query 118 KGLEKIPLLGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTT 177
GLE G L S+ +A+ G+ L+ L T NA++LR R EML
Sbjct 183 AGLELGGPEGQLPSFHIAVAACGVVQVAAAATLIGLANKTSSNASSLRAATQRATEMLAA 242
Query 178 ----LPKFPGLPGLPSLPDI 193
L PG G+ + PD+
Sbjct 243 RSARLDAIPGPAGM-TAPDV 261
Lambda K H
0.318 0.140 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 794889220320
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40