BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3869
Length=480
Score E
Sequences producing significant alignments: (Bits) Value
gi|15611005|ref|NP_218386.1| hypothetical protein Rv3869 [Mycoba... 963 0.0
gi|289441311|ref|ZP_06431055.1| conserved membrane protein [Myco... 961 0.0
gi|306795539|ref|ZP_07433841.1| conserved membrane protein [Myco... 961 0.0
gi|340628841|ref|YP_004747293.1| hypothetical protein MCAN_38911... 960 0.0
gi|183985415|ref|YP_001853706.1| hypothetical protein MMAR_5444 ... 798 0.0
gi|240168348|ref|ZP_04747007.1| hypothetical protein MkanA1_0348... 772 0.0
gi|15826904|ref|NP_301167.1| hypothetical protein ML0054 [Mycoba... 753 0.0
gi|183980218|ref|YP_001848509.1| hypothetical protein MMAR_0184 ... 692 0.0
gi|118470512|ref|YP_884478.1| hypothetical protein MSMEG_0060 [M... 657 0.0
gi|108797046|ref|YP_637243.1| hypothetical protein Mmcs_0065 [My... 648 0.0
gi|126432668|ref|YP_001068359.1| hypothetical protein Mjls_0055 ... 648 0.0
gi|315441749|ref|YP_004074628.1| hypothetical protein Mspyr1_005... 634 1e-179
gi|145221367|ref|YP_001132045.1| hypothetical protein Mflv_0772 ... 629 4e-178
gi|120401101|ref|YP_950930.1| hypothetical protein Mvan_0073 [My... 619 3e-175
gi|339296675|gb|AEJ48786.1| hypothetical protein CCDC5079_3597 [... 387 2e-105
gi|339296677|gb|AEJ48788.1| hypothetical protein CCDC5079_3599 [... 296 4e-78
gi|342859233|ref|ZP_08715887.1| hypothetical protein MCOL_10153 ... 282 7e-74
gi|226365629|ref|YP_002783412.1| hypothetical protein ROP_62200 ... 278 1e-72
gi|120401437|ref|YP_951266.1| hypothetical protein Mvan_0412 [My... 275 9e-72
gi|340625321|ref|YP_004743773.1| hypothetical protein MCAN_02921... 275 1e-71
gi|254818904|ref|ZP_05223905.1| hypothetical protein MintA_03211... 275 1e-71
gi|325675480|ref|ZP_08155164.1| MPSS family PPE41 protein secret... 272 1e-70
gi|15607424|ref|NP_214797.1| hypothetical protein Rv0283 [Mycoba... 271 1e-70
gi|289572868|ref|ZP_06453095.1| conserved membrane protein [Myco... 271 1e-70
gi|298523754|ref|ZP_07011163.1| conserved hypothetical protein [... 271 1e-70
gi|145220932|ref|YP_001131610.1| hypothetical protein Mflv_0328 ... 270 4e-70
gi|54022814|ref|YP_117056.1| hypothetical protein nfa8470 [Nocar... 269 9e-70
gi|240173108|ref|ZP_04751766.1| hypothetical protein MkanA1_2759... 268 2e-69
gi|296167586|ref|ZP_06849911.1| MPSS family PPE41 protein secret... 267 3e-69
gi|336460188|gb|EGO39092.1| type VII secretion protein EccB, Act... 267 3e-69
gi|41409877|ref|NP_962713.1| hypothetical protein MAP3779 [Mycob... 266 6e-69
gi|108802516|ref|YP_642712.1| hypothetical protein Mmcs_5556 [My... 265 9e-69
gi|118463197|ref|YP_883992.1| hypothetical protein MAV_4870 [Myc... 263 4e-68
gi|145226057|ref|YP_001136711.1| hypothetical protein Mflv_5462 ... 262 1e-67
gi|254777311|ref|ZP_05218827.1| hypothetical protein MaviaA2_219... 260 4e-67
gi|169630838|ref|YP_001704487.1| hypothetical protein MAB_3759c ... 259 7e-67
gi|333988931|ref|YP_004521545.1| hypothetical protein JDM601_029... 259 9e-67
gi|118473477|ref|YP_885027.1| hypothetical protein MSMEG_0616 [M... 258 2e-66
gi|119855163|ref|YP_935768.1| hypothetical protein Mkms_5778 [My... 257 4e-66
gi|226305377|ref|YP_002765335.1| hypothetical protein RER_18880 ... 254 3e-65
gi|183980570|ref|YP_001848861.1| hypothetical protein MMAR_0542 ... 253 6e-65
gi|118616919|ref|YP_905251.1| hypothetical protein MUL_1205 [Myc... 253 7e-65
gi|340626794|ref|YP_004745246.1| hypothetical protein MCAN_18001... 251 2e-64
gi|229489476|ref|ZP_04383339.1| conserved hypothetical protein [... 251 2e-64
gi|15611031|ref|NP_218412.1| hypothetical protein Rv3895c [Mycob... 251 2e-64
gi|308371541|ref|ZP_07667197.1| LOW QUALITY PROTEIN: conserved m... 251 3e-64
gi|296164774|ref|ZP_06847336.1| MPSS family PPE41 protein secret... 251 3e-64
gi|333988698|ref|YP_004521312.1| hypothetical protein JDM601_005... 251 3e-64
gi|31792971|ref|NP_855464.1| hypothetical protein Mb1811 [Mycoba... 251 3e-64
gi|15608920|ref|NP_216298.1| hypothetical protein Rv1782 [Mycoba... 250 3e-64
>gi|15611005|ref|NP_218386.1| hypothetical protein Rv3869 [Mycobacterium tuberculosis H37Rv]
gi|15843499|ref|NP_338536.1| hypothetical protein MT3982 [Mycobacterium tuberculosis CDC1551]
gi|31795043|ref|NP_857536.1| hypothetical protein Mb3899 [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=480
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/480 (100%), Positives = 480/480 (100%), Gaps = 0/480 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL
Sbjct 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS
Sbjct 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP
Sbjct 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG
Sbjct 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT
Sbjct 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
Query 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST
Sbjct 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV
Sbjct 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
Query 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP
Sbjct 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
>gi|289441311|ref|ZP_06431055.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289572127|ref|ZP_06452354.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289414230|gb|EFD11470.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289545882|gb|EFD49529.1| conserved membrane protein [Mycobacterium tuberculosis T17]
Length=480
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/480 (99%), Positives = 479/480 (99%), Gaps = 0/480 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL
Sbjct 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS
Sbjct 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP
Sbjct 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALT SMGIPVTARPTPISEGMFNALPDMG
Sbjct 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTLSMGIPVTARPTPISEGMFNALPDMG 240
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT
Sbjct 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
Query 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST
Sbjct 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV
Sbjct 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
Query 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP
Sbjct 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
>gi|306795539|ref|ZP_07433841.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308343982|gb|EFP32833.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
Length=480
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/480 (99%), Positives = 479/480 (99%), Gaps = 0/480 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL
Sbjct 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS
Sbjct 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQ AVIAMPLEIDASIDP
Sbjct 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQIAVIAMPLEIDASIDP 180
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG
Sbjct 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT
Sbjct 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
Query 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST
Sbjct 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV
Sbjct 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
Query 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP
Sbjct 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
>gi|340628841|ref|YP_004747293.1| hypothetical protein MCAN_38911 [Mycobacterium canettii CIPT
140010059]
gi|340007031|emb|CCC46222.1| putative conserved membrane protein [Mycobacterium canettii CIPT
140010059]
Length=480
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/480 (99%), Positives = 479/480 (99%), Gaps = 0/480 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL
Sbjct 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS
Sbjct 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
KLPMGQTVGIPGAPYATPV AGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP
Sbjct 121 KLPMGQTVGIPGAPYATPVLAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
LQSHEAVLVSYQG+TWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG
Sbjct 181 LQSHEAVLVSYQGQTWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT
Sbjct 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
Query 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST
Sbjct 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV
Sbjct 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
Query 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP
Sbjct 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
>gi|183985415|ref|YP_001853706.1| hypothetical protein MMAR_5444 [Mycobacterium marinum M]
gi|183178741|gb|ACC43851.1| conserved membrane protein [Mycobacterium marinum M]
Length=481
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/480 (81%), Positives = 432/480 (90%), Gaps = 0/480 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGA L
Sbjct 1 MGLRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAGL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LAYFKP GKLGG++L TDRATNQLYVLLSGQLHPVYNLTSARLVLG PA P TVKSSELS
Sbjct 61 LAYFKPAGKLGGSNLLTDRATNQLYVLLSGQLHPVYNLTSARLVLGTPAAPVTVKSSELS 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
+LP+GQT+GIPGAPYATPVS +TS WTLCDTV+RA + S V+T+++ MPL IDA+IDP
Sbjct 121 QLPLGQTIGIPGAPYATPVSGDTTSTWTLCDTVSRAGTASASVETSLLVMPLRIDAAIDP 180
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
++ +EA+L Y G+TWIVT+KGRH+IDL DRALTS++GIP+TA+ PISEGMFNALP G
Sbjct 181 IEPNEAMLADYHGQTWIVTSKGRHSIDLNDRALTSAVGIPITAQTVPISEGMFNALPARG 240
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
PWQLPPIPAAG PN+LGLP+DLVIGSVFQIHTDKGPQYYVVL DGIA VN TTAAALRAT
Sbjct 241 PWQLPPIPAAGEPNTLGLPEDLVIGSVFQIHTDKGPQYYVVLTDGIAAVNGTTAAALRAT 300
Query 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
Q+HGLVAPPA+VPSLVVRI ERVY SPLPDE L ++SRP DP LCW W+RSAGDQ+P +T
Sbjct 301 QSHGLVAPPAVVPSLVVRIPERVYSSPLPDETLNLMSRPDDPVLCWEWERSAGDQAPNTT 360
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
VL+GRHLPI PSAM G+KQI G +TVY+DGGKFV LQSPDPRY ESMYYIDP+GVRYGV
Sbjct 361 VLTGRHLPIPPSAMKTGLKQIQGRSTVYIDGGKFVQLQSPDPRYGESMYYIDPEGVRYGV 420
Query 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
P+A++AK+LGL P+ APWEIVRLLVDGPVLSKDAALLEH+TLP+DP+PRKVPAG GAP
Sbjct 421 PDADSAKALGLGMPKTAPWEIVRLLVDGPVLSKDAALLEHETLPSDPNPRKVPAGTPGAP 480
>gi|240168348|ref|ZP_04747007.1| hypothetical protein MkanA1_03487 [Mycobacterium kansasii ATCC
12478]
Length=480
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/480 (82%), Positives = 437/480 (92%), Gaps = 0/480 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRS+ LGIV+AVLIL GA L
Sbjct 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSVGLGIVIAVLILLGAGL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LA+FKPQGKLG +SL TDRATNQLYV++SGQLHPVYNLTSARLVLGNPA+PATVKSSELS
Sbjct 61 LAFFKPQGKLGASSLLTDRATNQLYVIVSGQLHPVYNLTSARLVLGNPASPATVKSSELS 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
++P+GQT+GIPGAPYATPVS +TS WTLCDTV R + S VQT+V+ MPL ID+SI+P
Sbjct 121 RMPLGQTIGIPGAPYATPVSGDTTSTWTLCDTVVRPGAASAAVQTSVLVMPLLIDSSINP 180
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
++++EA L +YQG+TWIVT KGRH+IDL+DRALTS+MGIPVTA+P P+SEGMFNALP MG
Sbjct 181 IEANEATLATYQGQTWIVTAKGRHSIDLSDRALTSAMGIPVTAQPVPMSEGMFNALPAMG 240
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
WQLPPIP AG PN+LGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIA VNATTAAALRAT
Sbjct 241 AWQLPPIPGAGTPNTLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAAVNATTAAALRAT 300
Query 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
Q+HGLVAPPA+VPSLVVRI ERVY SPLP E LKI+SRP +P LCW W+R AGDQSP++T
Sbjct 301 QSHGLVAPPAVVPSLVVRIPERVYDSPLPAEQLKIMSRPDEPTLCWMWERRAGDQSPKTT 360
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
VLSGRHLPI P AMN GIKQI GTATVY+DGGKFV LQSPDPRY ESMYYIDP+GVRYGV
Sbjct 361 VLSGRHLPIPPPAMNSGIKQIQGTATVYIDGGKFVQLQSPDPRYGESMYYIDPEGVRYGV 420
Query 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGAP 480
PNA++AK+LGL SP+ APWE+VRLLVDGPVLSKDAALLEH+TLPADPSPRKVPAG GAP
Sbjct 421 PNADSAKALGLGSPKTAPWEVVRLLVDGPVLSKDAALLEHETLPADPSPRKVPAGTPGAP 480
>gi|15826904|ref|NP_301167.1| hypothetical protein ML0054 [Mycobacterium leprae TN]
gi|221229382|ref|YP_002502798.1| hypothetical protein MLBr_00054 [Mycobacterium leprae Br4923]
gi|2370284|emb|CAA75204.1| hypothetical protein [Mycobacterium leprae]
gi|13092451|emb|CAC29562.1| putative membrane protein [Mycobacterium leprae]
gi|219932489|emb|CAR70147.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=481
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/478 (76%), Positives = 421/478 (89%), Gaps = 0/478 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSRSIALGIVVAV +L GA L
Sbjct 1 MGLRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVALLIGAVL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LAYFKPQGKLG ++L TDRATNQLYVLLSG L+PVYNLTSARL LG PANPA VKSSEL+
Sbjct 61 LAYFKPQGKLGASTLLTDRATNQLYVLLSGHLYPVYNLTSARLALGKPANPAAVKSSELT 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
KLP+GQT+GIPGAPYATPVS S+S WTLCDTVA+ +S SP VQT+VIA L+ID +I+P
Sbjct 121 KLPIGQTIGIPGAPYATPVSGDSSSTWTLCDTVAKIESESPAVQTSVIARSLQIDPAINP 180
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
LQ +EA+L SY+ +TW+V +KGRH+IDL DRALTS++GI V +PTP+SEG+FNALPD+G
Sbjct 181 LQPNEALLASYRDKTWLVNSKGRHSIDLADRALTSAIGISVNVKPTPLSEGLFNALPDVG 240
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT 300
W+LP IP GAPNSLGL DLVIGSVFQI +K PQYYVVL DGIAQVNATTA ALRAT
Sbjct 241 RWELPTIPDTGAPNSLGLSPDLVIGSVFQIQMEKSPQYYVVLSDGIAQVNATTADALRAT 300
Query 301 QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
Q+HGLVAPP++VP++VV+I ERVY SPLPDEPLK+V+R P LCW+W+R A DQ+P+ T
Sbjct 301 QSHGLVAPPSLVPNVVVQIPERVYDSPLPDEPLKMVARDDYPTLCWAWERKASDQAPKRT 360
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGV 420
+L G+HLP+ PSAM+ GIKQI GTATVY+DGG++VALQSPDPRY+ES+YY+DP+GVRYG+
Sbjct 361 MLIGQHLPLQPSAMSTGIKQIRGTATVYIDGGRYVALQSPDPRYSESLYYVDPEGVRYGL 420
Query 421 PNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASG 478
N+E K+LGL+SPQ APW IVRLLV+GPVLS+DAALLEHDTL ADPSPRKVPAG SG
Sbjct 421 ANSEAVKALGLASPQTAPWVIVRLLVEGPVLSRDAALLEHDTLIADPSPRKVPAGYSG 478
>gi|183980218|ref|YP_001848509.1| hypothetical protein MMAR_0184 [Mycobacterium marinum M]
gi|183173544|gb|ACC38654.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=481
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/470 (73%), Positives = 406/470 (87%), Gaps = 0/470 (0%)
Query 3 LRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLA 62
LRLTTKVQVSG RFL+RRLEHAIVRRDT+MFDDPLQFYSRS +LGIVVAVLILAGA +LA
Sbjct 4 LRLTTKVQVSGRRFLVRRLEHAIVRRDTQMFDDPLQFYSRSASLGIVVAVLILAGAVMLA 63
Query 63 YFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKL 122
Y KPQG+LG T+L DRA++QLYV +SGQLHPVYNLTSARLVLGNPA P +++SSEL+KL
Sbjct 64 YVKPQGQLGDTNLVADRASDQLYVTVSGQLHPVYNLTSARLVLGNPAAPTSMRSSELNKL 123
Query 123 PMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQ 182
P GQT+GIPGAPYATPVSA S S W+LCDTVA A + +PV +TA+IAMPL+IDA+I PL+
Sbjct 124 PKGQTIGIPGAPYATPVSADSASTWSLCDTVAYAGTANPVTRTALIAMPLQIDAAIAPLR 183
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMGPW 242
++EA+LVSY+ TWIVT +GRHAIDL+DRALT++MGI TA PTPISEGMFNALPD GPW
Sbjct 184 ANEALLVSYRHSTWIVTAQGRHAIDLSDRALTTAMGIGETATPTPISEGMFNALPDSGPW 243
Query 243 QLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRATQA 302
+LP I AAGAPN+LGLP LVIGSVF++ T G +++VVL DG+A VN TA ALR ++
Sbjct 244 RLPSIDAAGAPNTLGLPAALVIGSVFRVETTAGTKHFVVLRDGVAPVNDDTAGALRDMES 303
Query 303 HGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQSTVL 362
+GL+ PP + P LVV + +RVY SPLPDEPLKI+SR QDP LCWSWQRSAGDQ+P ++VL
Sbjct 304 YGLIDPPPVPPDLVVDLPQRVYQSPLPDEPLKIISRVQDPTLCWSWQRSAGDQAPTTSVL 363
Query 363 SGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYGVPN 422
SGRHLP+ PS ++ GI QI GTAT+Y+DGGKF+ LQSPDPRY ESMYY+DPQGVRYGVP+
Sbjct 364 SGRHLPLPPSVVSAGISQIRGTATIYIDGGKFLVLQSPDPRYAESMYYVDPQGVRYGVPD 423
Query 423 AETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKV 472
A A +LGL SPQ+APW++VRLLVDGPVLSKDAALLEH+TLP DP+P K+
Sbjct 424 AAVANALGLGSPQDAPWQVVRLLVDGPVLSKDAALLEHETLPPDPNPAKI 473
>gi|118470512|ref|YP_884478.1| hypothetical protein MSMEG_0060 [Mycobacterium smegmatis str.
MC2 155]
gi|118171799|gb|ABK72695.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=479
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/476 (66%), Positives = 392/476 (83%), Gaps = 3/476 (0%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
G RLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSR++ G+VV+VLI GAAL+
Sbjct 3 GFRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRAVFAGVVVSVLICLGAALM 62
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLLSG--QLHPVYNLTSARLVLGNPANPATVKSSEL 119
AYFKP GK G L DR TNQLYV+L G QL PVYNLTSARLVLGN +NP VKS EL
Sbjct 63 AYFKPLGKQGSDQLLVDRTTNQLYVMLPGSNQLRPVYNLTSARLVLGNASNPVAVKSEEL 122
Query 120 SKLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
+++ GQ++GIPGAPYATP + S WTLCDTVA+ DS++P V+T+++ L ID+ +
Sbjct 123 NRISKGQSIGIPGAPYATP-TGTPASQWTLCDTVAKPDSSAPKVETSILIRTLAIDSGVG 181
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDM 239
P+++ + +LVSY+G W++T GRH+IDL DRA+TS++GIPVTA+PTPIS+G+FNALP+
Sbjct 182 PIRADQGMLVSYEGANWLITEGGRHSIDLADRAVTSAVGIPVTAKPTPISQGLFNALPNR 241
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRA 299
GPWQLP IPAAGAPNS+GLP++LVIGSVF+ T+ PQ+YVVLPDG+A+VN TTAAALRA
Sbjct 242 GPWQLPQIPAAGAPNSVGLPENLVIGSVFRTATESDPQHYVVLPDGVARVNNTTAAALRA 301
Query 300 TQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQS 359
T ++GL+ PPA+ S+V +I E+VY SPLPD+PL ++ R P LCWSWQR GDQ+P++
Sbjct 302 TNSYGLMQPPAVEASVVAKIPEQVYVSPLPDQPLDVLLRQDSPVLCWSWQREPGDQAPKT 361
Query 360 TVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYG 419
TV++GR LP+ +A+ GI QI G +TVY++GG+FV LQSPDPR ESMYYIDPQGVRYG
Sbjct 362 TVIAGRRLPLPANAIGTGIDQIGGDSTVYIEGGQFVRLQSPDPRVGESMYYIDPQGVRYG 421
Query 420 VPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAG 475
+ N + AK+LGL+ P NAPW++V LLVDGPVLSK+AAL+EHDTLPADP+PRKV +G
Sbjct 422 IANDDAAKNLGLAGPVNAPWQVVGLLVDGPVLSKEAALIEHDTLPADPNPRKVASG 477
>gi|108797046|ref|YP_637243.1| hypothetical protein Mmcs_0065 [Mycobacterium sp. MCS]
gi|119866131|ref|YP_936083.1| hypothetical protein Mkms_0074 [Mycobacterium sp. KMS]
gi|108767465|gb|ABG06187.1| protein of unknown function DUF690 [Mycobacterium sp. MCS]
gi|119692220|gb|ABL89293.1| protein of unknown function DUF690 [Mycobacterium sp. KMS]
Length=491
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/473 (66%), Positives = 384/473 (82%), Gaps = 3/473 (0%)
Query 3 LRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLA 62
RLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSR++ GI++AVLI GAAL+A
Sbjct 4 FRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRAVGAGIIIAVLICLGAALMA 63
Query 63 YFKPQGKLGGTSLFTDRATNQLYVLL--SGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
YFKP GK GG L DR+TNQLYV++ G+L PVYNLTSARLVLGNP P VKS EL+
Sbjct 64 YFKPLGKRGGDQLLVDRSTNQLYVVMPGGGELRPVYNLTSARLVLGNPGTPVAVKSEELN 123
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
++ GQ +GIPGAPYATPVS + S+WTLCDTV + +S P V+T+V+ PL +D+++ P
Sbjct 124 RMSKGQPIGIPGAPYATPVSGAAESMWTLCDTVTKPESVVPRVETSVLVRPLVVDSTVGP 183
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
L+ + +LVS++G W+VT GRH+IDL DRA+TS++GIPVTAR TPISEG+FNALP+ G
Sbjct 184 LRPDQGMLVSFKGANWLVTEGGRHSIDLADRAVTSAVGIPVTARATPISEGLFNALPNAG 243
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQ-YYVVLPDGIAQVNATTAAALRA 299
PWQLP + AG PN++GLP +LVIGSVF+ T+ Q +YVVL DG+A+VN TAAALRA
Sbjct 244 PWQLPQVARAGEPNTVGLPANLVIGSVFETVTESDDQQHYVVLADGVARVNDPTAAALRA 303
Query 300 TQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQS 359
T ++GL+ PP + S+V RI E+VY SPLPD+ L I+ R DP LCWSWQR AGDQ+P++
Sbjct 304 TNSYGLIEPPMVEASVVARIPEQVYVSPLPDKALDILLRQDDPTLCWSWQRVAGDQAPRT 363
Query 360 TVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYG 419
TV++GR LPI+ SA+N GI+QI G +TVY+DGG+F+ LQSPDPRY ES+YYIDPQGVRYG
Sbjct 364 TVIAGRRLPIAASALNTGIRQITGDSTVYIDGGQFIRLQSPDPRYGESLYYIDPQGVRYG 423
Query 420 VPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKV 472
V + ETAK+LGL P APW++V LLVDGPVLSK AALLEHDTLPA+P+PRKV
Sbjct 424 VSDEETAKNLGLVGPLTAPWQVVSLLVDGPVLSKQAALLEHDTLPANPNPRKV 476
>gi|126432668|ref|YP_001068359.1| hypothetical protein Mjls_0055 [Mycobacterium sp. JLS]
gi|126232468|gb|ABN95868.1| protein of unknown function DUF690 [Mycobacterium sp. JLS]
Length=491
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/473 (66%), Positives = 384/473 (82%), Gaps = 3/473 (0%)
Query 3 LRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLA 62
RLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSR++ GI++AVLI GAAL+A
Sbjct 4 FRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRAVGAGIIIAVLICLGAALMA 63
Query 63 YFKPQGKLGGTSLFTDRATNQLYVLL--SGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
YFKP GK GG L DR+TNQLYV++ G+L PVYNLTSARLVLGNP P VKS EL+
Sbjct 64 YFKPLGKRGGDQLLVDRSTNQLYVVMPGGGELRPVYNLTSARLVLGNPGTPVAVKSEELN 123
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
++ GQ +GIPGAPYATPVS + S+WTLCDTV + +S P V+T+V+ PL +D+++ P
Sbjct 124 RMSKGQPIGIPGAPYATPVSGAAESMWTLCDTVTKPESVVPRVETSVLVRPLVVDSTVGP 183
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMG 240
L+ + +LVS++G W+VT GRH+IDL DRA+TS++GIPVTAR TPISEG+FNALP+ G
Sbjct 184 LRPDQGMLVSFKGANWLVTEGGRHSIDLADRAVTSAVGIPVTARATPISEGLFNALPNAG 243
Query 241 PWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQ-YYVVLPDGIAQVNATTAAALRA 299
PWQLP + AG PN++GLP +LVIGSVF+ T+ Q +YVVL DG+A+VN TAAALRA
Sbjct 244 PWQLPQVARAGEPNTVGLPANLVIGSVFETVTESDDQQHYVVLADGVARVNDPTAAALRA 303
Query 300 TQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQS 359
T ++GL+ PP + S+V RI E+VY SPLPD+ L I+ R DP LCWSWQR AGDQ+P++
Sbjct 304 TNSYGLIEPPMVEASVVARIPEQVYVSPLPDKALDILLRQDDPTLCWSWQRVAGDQAPRT 363
Query 360 TVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQGVRYG 419
TV++GR LPI+ SA+N GI+QI G +TVY+DGG+F+ LQSPDPRY ES+YYIDPQGVRYG
Sbjct 364 TVIAGRRLPIAASALNTGIRQITGDSTVYIDGGQFIRLQSPDPRYGESLYYIDPQGVRYG 423
Query 420 VPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKV 472
V + ETAK+LGL P APW++V LLVDGPVLSK AALLEHDTLPA+P+PRKV
Sbjct 424 VTDEETAKNLGLVGPLTAPWQVVSLLVDGPVLSKQAALLEHDTLPANPNPRKV 476
>gi|315441749|ref|YP_004074628.1| hypothetical protein Mspyr1_00590 [Mycobacterium sp. Spyr1]
gi|315260052|gb|ADT96793.1| Protein of unknown function (DUF690) [Mycobacterium sp. Spyr1]
Length=493
Score = 634 bits (1634), Expect = 1e-179, Method: Compositional matrix adjust.
Identities = 307/482 (64%), Positives = 381/482 (80%), Gaps = 6/482 (1%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
G RLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSR+++ GIV+AVLI GA LL
Sbjct 3 GFRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRAVSAGIVIAVLICLGAVLL 62
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLL--SGQLHPVYNLTSARLVLGNPANPATVKSSEL 119
AYFKP GK G +L DR TNQLY++L S QL PVYNLTSARL+LG P VKS EL
Sbjct 63 AYFKPLGKRGDDTLLVDRTTNQLYLVLPDSSQLRPVYNLTSARLILGEGKTPVAVKSDEL 122
Query 120 SKLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
++P G VGIPGAPYAT VSA S S W+LCDTV + DS +P V+++V+ PL +DAS+
Sbjct 123 DRMPKGLPVGIPGAPYATAVSASSESQWSLCDTVVKPDSVAPTVESSVLVTPLTLDASVG 182
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDM 239
+ + +LV+Y+ TW+VT +GRH ID+ DRA+TS++GIPVTAR TPISEG+FNALPD
Sbjct 183 AMGPEQGMLVTYKDRTWLVTPQGRHLIDMADRAVTSAVGIPVTARATPISEGLFNALPDE 242
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQY----YVVLPDGIAQVNATTAA 295
GPW+LP IP AG PN++GLP LVIGSVF TD G Q YVVLP G+A+VN+TTAA
Sbjct 243 GPWRLPDIPGAGTPNAVGLPPALVIGSVFVTVTDMGEQTDEQGYVVLPSGVAKVNSTTAA 302
Query 296 ALRATQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQ 355
ALRAT ++GL+ PP+M S+V RI E+VY SPLPD P+ ++ R + P LCWSWQR AGDQ
Sbjct 303 ALRATNSYGLIEPPSMESSVVARIPEQVYTSPLPDRPMDVLGRQEVPTLCWSWQRVAGDQ 362
Query 356 SPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQG 415
+P+ TV++GR LP+ PSA+ GI QI G ATVY+DGG+++ LQSP+PRY E++YYIDPQG
Sbjct 363 APKMTVIAGRRLPLPPSALATGIDQISGDATVYVDGGQYIHLQSPEPRYGENLYYIDPQG 422
Query 416 VRYGVPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAG 475
VRYG+P+ ETA LGLS+P+ APW++V LLVDGPVLS+ AAL+EHDTLP +P+PR+ G
Sbjct 423 VRYGLPDQETAARLGLSAPRTAPWQVVSLLVDGPVLSQQAALIEHDTLPPNPNPRRAGGG 482
Query 476 AS 477
++
Sbjct 483 ST 484
>gi|145221367|ref|YP_001132045.1| hypothetical protein Mflv_0772 [Mycobacterium gilvum PYR-GCK]
gi|145213853|gb|ABP43257.1| protein of unknown function DUF690 [Mycobacterium gilvum PYR-GCK]
Length=493
Score = 629 bits (1622), Expect = 4e-178, Method: Compositional matrix adjust.
Identities = 305/482 (64%), Positives = 379/482 (79%), Gaps = 6/482 (1%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
G RLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSR+++ GIV+AVLI GA LL
Sbjct 3 GFRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRAVSAGIVIAVLICLGAVLL 62
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLL--SGQLHPVYNLTSARLVLGNPANPATVKSSEL 119
AYFKP GK G +L DR TNQLY++L S QL PVYNLTSARL+LG P VKS EL
Sbjct 63 AYFKPLGKRGDDTLLVDRTTNQLYLVLPDSSQLRPVYNLTSARLILGEGKTPVAVKSDEL 122
Query 120 SKLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
+ P G VGIPGAPYAT VSA S S W+LCDTV + D +P V+++V+ PL +DAS+
Sbjct 123 DRTPKGLPVGIPGAPYATAVSAPSESQWSLCDTVVKPDRVAPAVESSVLVTPLALDASVG 182
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDM 239
++ + +LV+Y+ TW+VT +GRH ID+ DRA+TS++GIPVTAR PISEG+FNALPD
Sbjct 183 AMRPEQGMLVTYKDRTWLVTPQGRHLIDMADRAVTSAVGIPVTARAAPISEGLFNALPDE 242
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQY----YVVLPDGIAQVNATTAA 295
GPW+LP IP AG PN++GLP LVIGSVF TD G Q YVVLP G+A+VN+TTAA
Sbjct 243 GPWRLPDIPGAGTPNTVGLPPALVIGSVFVTVTDMGEQTDEQGYVVLPSGVAKVNSTTAA 302
Query 296 ALRATQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQ 355
ALRAT ++GL+ PP+M S+V RI E+VY SPLPD P+ ++ R + P LCWSWQR AGDQ
Sbjct 303 ALRATNSYGLIEPPSMESSVVARIPEQVYTSPLPDRPMDVLGRQEVPTLCWSWQRVAGDQ 362
Query 356 SPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQG 415
+P+ TV++GR LP+ PSA+ GI QI G ATVY+DGG+++ LQSP+PRY E++YYIDPQG
Sbjct 363 APKMTVIAGRRLPLPPSALATGIDQISGDATVYVDGGQYIQLQSPEPRYGENLYYIDPQG 422
Query 416 VRYGVPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAG 475
VRYG+P+ ETA LGLS+P+ APW++V LLVDGPVLS+ AAL+EHDTLP +P+PR+ G
Sbjct 423 VRYGLPDQETAARLGLSAPRTAPWQVVSLLVDGPVLSQQAALIEHDTLPPNPNPRRAGGG 482
Query 476 AS 477
++
Sbjct 483 ST 484
>gi|120401101|ref|YP_950930.1| hypothetical protein Mvan_0073 [Mycobacterium vanbaalenii PYR-1]
gi|119953919|gb|ABM10924.1| protein of unknown function DUF690 [Mycobacterium vanbaalenii
PYR-1]
Length=495
Score = 619 bits (1596), Expect = 3e-175, Method: Compositional matrix adjust.
Identities = 307/482 (64%), Positives = 385/482 (80%), Gaps = 6/482 (1%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
G RLTTKVQVSGWRFLLRR+EHAIVRRDTRMFDDPLQFYSR++ GIV+AVLI GA LL
Sbjct 3 GFRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRAVTTGIVIAVLICLGAVLL 62
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLL--SGQLHPVYNLTSARLVLGNPANPATVKSSEL 119
AYFKP GK GG +L DR TNQL+++L SGQL PVYNLTSARL+LG+ P VKS EL
Sbjct 63 AYFKPLGKRGGDTLLVDRTTNQLFIVLPDSGQLRPVYNLTSARLILGDGKTPVAVKSQEL 122
Query 120 SKLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
K+P GQ VGIPGAPYATPV++ + S WTLCDTV + DS +P V+++V+ PL +DAS+
Sbjct 123 DKMPKGQPVGIPGAPYATPVASSAESQWTLCDTVIKPDSVAPAVESSVLITPLALDASVG 182
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDM 239
++ + +LVS++ + W+VT GRH IDL DRA+TS++GIPVTAR PISEG+FNALP+
Sbjct 183 AMRPEQGMLVSFRDQNWLVTEAGRHLIDLADRAVTSAVGIPVTARSAPISEGLFNALPNA 242
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQ----YYVVLPDGIAQVNATTAA 295
GPW+LP IPA G+PNS+GLP +LV+GSVF TD G Q YVVLP+G+A+VN TTAA
Sbjct 243 GPWRLPDIPAGGSPNSVGLPPELVVGSVFVTVTDAGEQAGEQNYVVLPNGVAKVNTTTAA 302
Query 296 ALRATQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQ 355
ALRAT + GL+ PP++ S V RI E+VY SPLP P+ +++R + P LCW+WQR AGDQ
Sbjct 303 ALRATNSFGLIEPPSLESSAVARIPEQVYDSPLPGVPMDVLARQELPTLCWAWQRVAGDQ 362
Query 356 SPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTESMYYIDPQG 415
+P+ TV++GR LP+ PSA++ GI QI G ATVY+DGG+++ LQSPDPR+ E++YYIDPQG
Sbjct 363 APKMTVIAGRRLPLPPSALSTGIDQITGDATVYIDGGQYIRLQSPDPRFGENLYYIDPQG 422
Query 416 VRYGVPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAG 475
VRYG+P+ ETA LGLSSP+ APW++V LLVDGPVLS+ AAL+EHDTLP +P+PR V A
Sbjct 423 VRYGLPDEETAAKLGLSSPRTAPWQVVSLLVDGPVLSQQAALVEHDTLPPNPNPRSVGAD 482
Query 476 AS 477
A+
Sbjct 483 AA 484
>gi|339296675|gb|AEJ48786.1| hypothetical protein CCDC5079_3597 [Mycobacterium tuberculosis
CCDC5079]
Length=200
Score = 387 bits (995), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 193/195 (99%), Positives = 193/195 (99%), Gaps = 0/195 (0%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL
Sbjct 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS
Sbjct 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP
Sbjct 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
Query 181 LQSHEAVLVSYQGET 195
LQSHEAVLVSYQG
Sbjct 181 LQSHEAVLVSYQGRN 195
>gi|339296677|gb|AEJ48788.1| hypothetical protein CCDC5079_3599 [Mycobacterium tuberculosis
CCDC5079]
Length=145
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%)
Query 336 VSRPQDPALCWSWQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFV 395
+SRPQDPALCWSWQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFV
Sbjct 1 MSRPQDPALCWSWQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFV 60
Query 396 ALQSPDPRYTESMYYIDPQGVRYGVPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDA 455
ALQSPDPRYTESMYYIDPQGVRYGVPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDA
Sbjct 61 ALQSPDPRYTESMYYIDPQGVRYGVPNAETAKSLGLSSPQNAPWEIVRLLVDGPVLSKDA 120
Query 456 ALLEHDTLPADPSPRKVPAGASGAP 480
ALLEHDTLPADPSPRKVPAGASGAP
Sbjct 121 ALLEHDTLPADPSPRKVPAGASGAP 145
>gi|342859233|ref|ZP_08715887.1| hypothetical protein MCOL_10153 [Mycobacterium colombiense CECT
3035]
gi|342133474|gb|EGT86677.1| hypothetical protein MCOL_10153 [Mycobacterium colombiense CECT
3035]
Length=542
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 179/512 (35%), Positives = 268/512 (53%), Gaps = 38/512 (7%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SR++A+G V+ V LAG + +
Sbjct 32 FVTRHQVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLI 91
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G +G ++ DR+T LYV + LHPV NLTSARL+ G+ +P VKSSEL + P
Sbjct 92 RPSGTVGTNAVLADRSTAALYVRVGDDLHPVLNLTSARLITGHAVDPTMVKSSELDRFPR 151
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVAR----ADSTSPVVQTAVIAMPLEIDASIDP 180
G +GIPGAP + + WT+CD V+ + T + P A
Sbjct 152 GNLIGIPGAPERMVQNPSHDANWTVCDAVSEPAQGGHAAHSTGVTVIAGRPDSSGARAAT 211
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTAR----PTPISEGMFNAL 236
+ S +A+LV G TW++ R I+LTD A+T+++G+ P PI+ G+FNA+
Sbjct 212 IASQQAILVDRDGSTWLLWDGKRSQINLTDHAITNALGLGQNNSEVPAPRPIALGLFNAI 271
Query 237 PDMGPWQLPPIPAAGAPNSLGLP---DDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATT 293
P+ P P IP+AGAP +P +V+ + + P+YY V+PDG+ Q++
Sbjct 272 PEAPPLTAPGIPSAGAPAPFSVPAPIGAVVVSYALEQSSSGTPRYYAVMPDGLQQISPVL 331
Query 294 AAALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRS 351
AA LR T ++GL PP + V + ++ + + PD+ + +V + P C W +
Sbjct 332 AAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVSVVDAAKSPVTCAYWSKP 391
Query 352 AGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT-------VYLDGGKFVALQS----P 400
AG + ++SG LPI S + + + G AT V L G Q+ P
Sbjct 392 AGAATSSLRLMSGSALPIPESIRTVDL--VGGAATNGLVATRVALAPGTGYFTQTVGGGP 449
Query 401 DPRYTESMYYIDPQGVRYGVPN---------AETAKSLGLS-SPQNAPWEIVRLLVDGPV 450
D T S++++ GVRYG+ N +T ++LGL+ SP PW ++ L +GP
Sbjct 450 DSPGTGSLFWVSDTGVRYGIDNESEHSAAGHGKTVEALGLNGSPVPVPWSVLSLFANGPT 509
Query 451 LSKDAALLEHDTLPADPSPRKVPAG--ASGAP 480
LS+ ALL HD L D P +V A A GAP
Sbjct 510 LSRADALLAHDGLTPDQKPGRVAAAREAEGAP 541
>gi|226365629|ref|YP_002783412.1| hypothetical protein ROP_62200 [Rhodococcus opacus B4]
gi|226244119|dbj|BAH54467.1| hypothetical protein [Rhodococcus opacus B4]
Length=496
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/499 (37%), Positives = 272/499 (55%), Gaps = 27/499 (5%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
M + TT+ QV+G+RFL+RR+EHA+VRRD RM DP++ SR++A+G+V+A L LAG A
Sbjct 1 MAVTPTTRWQVNGYRFLVRRMEHALVRRDVRMLHDPMRSQSRALAVGVVIASLGLAGCAA 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LA F+PQ K+G S+ + + ++V+ L PV NL SARL++G P NP VK SEL
Sbjct 61 LALFRPQDKIGDASIVVGKDSGAMFVVTGDTLRPVLNLASARLIVGKPENPVIVKESELD 120
Query 121 KLPMGQTVGIPGAPYATPVSA-GSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
P G VGIPGAP A P + + WT+CD++A + S V T+VI E
Sbjct 121 TRPRGALVGIPGAPSALPAGDPAAKTPWTVCDSIAADGNLS--VTTSVIVGETEGSDGGA 178
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDM 239
L +A+L S ++++ R +DL D A+T ++G+ ARP P+S+G+ NA+P++
Sbjct 179 TLTGDQALLASTSDASYLIYGGKRARVDLDDPAVTRALGLE-GARPRPVSKGLVNAVPEV 237
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRA 299
P P IP AG+ L D V+GSVF +YVVL DGI ++++ A +
Sbjct 238 PPLAAPVIPDAGSSPRYPL-QDKVVGSVFTALIGSETAHYVVLRDGIQKISSAVANLIFL 296
Query 300 TQAHGLVAPPAMVPSLVVRI--AERVYPSPLPDEPLKIVSRPQDPALCWSW-------QR 350
+ +HG ++ P RI E++ P+ IV P C +W +
Sbjct 297 SDSHGDTEMSSVPPDATKRIPSVEQLAVDSFPESAPAIVDASDSPVSCLTWKPLRAPDET 356
Query 351 SAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTA----TVYLDGGKFVALQS----PDP 402
A + + ++++GR LPI A + + Q G TVY+ G +QS P
Sbjct 357 GASGPAAELSLVAGRALPIPGDARAVELAQSDGAGDNADTVYVQPGTSGFVQSTGIEPTS 416
Query 403 RYTESMYYIDPQGVRYGVP----NAETAKSLGLSSPQN-APWEIVRLLVDGPVLSKDAAL 457
+S +++ GVR+G+P + ++A +LGL Q APW+I+ LL GP L K +AL
Sbjct 417 TRRDSKFFVADTGVRFGIPDKDADKDSAAALGLDGAQPLAPWQILGLLAQGPSLGKSSAL 476
Query 458 LEHDTLPADPSPRKVPAGA 476
+ HD + D P V +G+
Sbjct 477 VAHDGVAPDLDPAAVASGS 495
>gi|120401437|ref|YP_951266.1| hypothetical protein Mvan_0412 [Mycobacterium vanbaalenii PYR-1]
gi|119954255|gb|ABM11260.1| protein of unknown function DUF690 [Mycobacterium vanbaalenii
PYR-1]
Length=510
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 181/480 (38%), Positives = 258/480 (54%), Gaps = 20/480 (4%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ + DTRM DPL+ SRS+ +G ++ V L G L +
Sbjct 30 FVTRHQVTGWRFVMRRIASGVALHDTRMLVDPLRTQSRSVLVGALILVTGLIGCFLFSLI 89
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G ++ DR T LYV L QLHPV NLTSARL+ G P NPA VKSSEL + P
Sbjct 90 RPSGAAGTDAVLADRDTAALYVRLGEQLHPVLNLTSARLIAGRPDNPAMVKSSELDQFPR 149
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSH 184
G +GIPGAP + + WT+CD A ST+ V T + P + L +
Sbjct 150 GNLIGIPGAPERMVANTTRDAYWTVCD--AATGSTAGV--TVIAGRPADGGERAAALPAG 205
Query 185 EAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPV-TARPTPISEGMFNALPDMGPWQ 243
AVL G TW++ R IDL DRA+T +GI V +A P PIS G+FNA+P+ P
Sbjct 206 HAVLAENGGRTWLLWDGKRSPIDLADRAVTGGLGIGVDSAAPQPISVGLFNAIPEGPPLV 265
Query 244 LPPIPAAGAPNSLGLPDDLVIGSVFQIH-TDKGPQYYVVLPDGIAQVNATTAAALRATQA 302
P IP AG+P++ LP+ L IG+V + D ++YVVL DG+ V+ AA LR + +
Sbjct 266 TPAIPGAGSPSAAPLPEPLPIGAVVVAYDADNAIRHYVVLADGLQAVSPVVAAILRNSNS 325
Query 303 HGLVAPPAMVPSLVVRIAER--VYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
+GL PP + +V RI E V + P + + +V DP C W + G Q T
Sbjct 326 YGLAQPPRLDADVVARIPEAAGVDNAAYPSDRVTLVDVAADPVTCAQWAKPEGAQDASLT 385
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTE---SMYYIDPQGVR 417
+ +G LP++ A + + GT D VAL + + S+++I GVR
Sbjct 386 LRTGAVLPVADGARTVELVS-SGTPGGPAD---RVALPPGTGYFVDSAGSLFWISDTGVR 441
Query 418 YGVPNA----ETAKSLGLSS-PQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKV 472
YG+ +T +LGL++ P P ++ GP LS+ ALL HD+L +P+P ++
Sbjct 442 YGIDTGSDGVDTVAALGLTTAPLPIPSSVLSQFAVGPTLSRTDALLAHDSLAPNPAPARL 501
>gi|340625321|ref|YP_004743773.1| hypothetical protein MCAN_02921 [Mycobacterium canettii CIPT
140010059]
gi|340003511|emb|CCC42632.1| putative conserved membrane protein [Mycobacterium canettii CIPT
140010059]
Length=538
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 186/509 (37%), Positives = 267/509 (53%), Gaps = 42/509 (8%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SR++ +G+++ + L G+ + +
Sbjct 36 FVTRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLI 95
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G+ G ++ DR+T LYV + QLHPV NLTSARL++G P +P TVKS+EL + P
Sbjct 96 RPNGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPR 155
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTV-ARADSTSPVVQTAVIAMPLE-IDASIDPLQ 182
G +GIPGAP + + + WT+CD + A + + V VIA PLE A L
Sbjct 156 GNLIGIPGAPERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALG 215
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPDMGP 241
+AVLV TW++ R IDL D A+TS +G+ P I+ G+FNA+P+ P
Sbjct 216 PGQAVLVDSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRVIASGLFNAIPEAPP 275
Query 242 WQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT--DKGP------QYYVVLPDGIAQVNATT 293
P IP AG P S G+P IG+V + D G QYY VLPDG+ Q++
Sbjct 276 LTAPIIPDAGNPASFGVPAP--IGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVL 333
Query 294 AAALRATQAHGLVAPPAMVPSLVVR------IAERVYPSPLPDEPLKIVSRPQDPALCWS 347
AA LR ++GL PP + V + + R YPS EP+ +V +DP C
Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPS----EPVSLVDVTRDPVTCAY 389
Query 348 WQRSAGDQSPQSTVLSGRHLPISPSAMN----MGIKQIHGTATVYLDGGKFVALQS---- 399
W + G + T+L+G LP+ P A++ +G V L G Q+
Sbjct 390 WSKPVGAATSSLTLLAGSALPV-PDAVHTVELVGAGNGGVATRVALAAGTGYFTQTVGGG 448
Query 400 PDPRYTESMYYIDPQGVRYGVPN--------AETAKSLGLSSPQN-APWEIVRLLVDGPV 450
PD S++++ GVRYG+ N + ++LGL+ P PW ++ L V GP
Sbjct 449 PDAPAAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPT 508
Query 451 LSKDAALLEHDTLPADPSPRKVPAGASGA 479
LS+ ALL HDTL D P + P A G
Sbjct 509 LSRADALLAHDTLVPDSRPAR-PVSAEGG 536
>gi|254818904|ref|ZP_05223905.1| hypothetical protein MintA_03211 [Mycobacterium intracellulare
ATCC 13950]
Length=539
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/510 (36%), Positives = 262/510 (52%), Gaps = 37/510 (7%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QVSGWRF++RR+ I DTRM DPL+ SR++A+G V+ V LAG + +
Sbjct 32 FVTRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLI 91
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G ++ DR+T LYV + LHPV NLTSARL+ G P +P VKSSEL + P
Sbjct 92 RPNGTAGTNAVLADRSTAALYVRVGEDLHPVLNLTSARLITGRPVDPTMVKSSELDRFPR 151
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVAR--ADSTSPVVQTAVIAMPLEIDASIDPLQ 182
G +GIPGAP + + + WT+CD V+ + T + P A L
Sbjct 152 GNLIGIPGAPERMVQNPSTDANWTVCDAVSEPGGHAAHSTGVTVIAGRPDSSGARAATLP 211
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMG-------IPVTARPTPISEGMFNA 235
+A+L G TW++ R I+LTD A+T+++G IP P PI+ G+FNA
Sbjct 212 PRQAMLADRDGTTWLLWDGKRSQINLTDHAITNALGLGQGNSEIPA---PRPIALGLFNA 268
Query 236 LPDMGPWQLPPIPAAGAPNSLGLP---DDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNAT 292
+P+ P P IP AGAP +P +V+ + P+YY VLPDG+ Q++
Sbjct 269 IPEAPPLTAPGIPNAGAPAPFTVPAPIGGVVVSYTLDQSSSGAPRYYAVLPDGLQQISPV 328
Query 293 TAAALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQR 350
AA LR T ++GL PP + V + ++ + + PD+ + +V + P +C W +
Sbjct 329 LAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVGVVDAAKSPVMCAYWSK 388
Query 351 SAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT---VYLDGGKFVALQS----PDPR 403
A S +L+G LP++ S + + AT V L G Q+ P+
Sbjct 389 PAKAASSSVNLLTGSALPVAESIRTVDLVGGGSPATAARVALAPGTGYFTQTVGGGPNSP 448
Query 404 YTESMYYIDPQGVRYGVPNA---------ETAKSLGLS-SPQNAPWEIVRLLVDGPVLSK 453
S++++ GVRYG+ N +T ++LGL+ SP PW ++ L GP LS+
Sbjct 449 GAGSLFWVSDTGVRYGIDNEAEHSAAGQNKTVEALGLTGSPVPIPWSVLSLFASGPTLSR 508
Query 454 DAALLEHDTLPADPSPRKVPAG---ASGAP 480
ALL HD L D P +V A A GAP
Sbjct 509 ADALLAHDGLTPDQKPGRVTAAAREAEGAP 538
>gi|325675480|ref|ZP_08155164.1| MPSS family PPE41 protein secretion system protein [Rhodococcus
equi ATCC 33707]
gi|325553451|gb|EGD23129.1| MPSS family PPE41 protein secretion system protein [Rhodococcus
equi ATCC 33707]
Length=470
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/474 (38%), Positives = 257/474 (55%), Gaps = 24/474 (5%)
Query 21 LEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYFKPQGKLGGTSLFTDRA 80
+EHA+VR+D RM DP++ SR++ +GIVVA L+LAG A LA F+PQ K+G ++ +
Sbjct 1 MEHALVRKDVRMLSDPMRSQSRALGVGIVVACLVLAGCAALALFRPQDKIGNATIVVGKD 60
Query 81 TNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPMGQTVGIPGAPYATPVS 140
+ ++V ++ LHPV NL SARL++G A P TV SE+ P G VGIPGAP A P
Sbjct 61 SGAMFVAVNDALHPVLNLASARLIVGEAAKPVTVSESEIESRPRGALVGIPGAPSALPAG 120
Query 141 AGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSHEAVLVSYQGETWIVTT 200
+ WT+CDTV AD T V T V+ P D + PL S A+LVS+ +T++V
Sbjct 121 SPDGQPWTVCDTVT-ADGTGSVTTTVVVGEPSWSD-RVGPLGSDRALLVSHGADTYLVYD 178
Query 201 KGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMGPWQLPPIPAAGAPNSLGLPD 260
R IDL DRA+T ++G+ +A+P PI G+ NA+P+ P P I + G+ + +
Sbjct 179 GRRAPIDLRDRAVTRALGLE-SAQPRPIGRGLLNAIPETLPITPPQIESRGSAPNYQIA- 236
Query 261 DLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRATQAHGLVAPPAMVPSLVVR-- 318
+GSV ++ +YYVVL DG+ +++A TA ++ + G + P + R
Sbjct 237 GRTVGSVVKLMRGDDVRYYVVLRDGVQEISAATALLIQFADSQGQSEMATISPDALARAP 296
Query 319 IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQS-------TVLSGRHLPISP 371
+A+ + S P P ++ DP C +W Q S T+ +GR LPI
Sbjct 297 LADVLDVSTFPAVPPRLADPAADPVGCLTWTPQGAAQGDDSGRVEAALTLAAGRSLPIPD 356
Query 372 SAMNMGIKQIHGTAT----VYL--DGGKFV---ALQSPDPRYTESMYYIDPQGVRYGVPN 422
A + + Q G+ YL G FV L+S R ++++ GVRYGV N
Sbjct 357 DARTVRLAQADGSGDHADFAYLRSGAGGFVQTTGLESGSARKG-GLFFVADTGVRYGVEN 415
Query 423 AETAKSLGLSSPQN-APWEIVRLLVDGPVLSKDAALLEHDTLPADPSPRKVPAG 475
A+ AK+LG P APW IV LL GP L K AAL+ HD + AD P V AG
Sbjct 416 ADAAKALGFEVPGAPAPWRIVELLAPGPTLGKSAALVAHDGVSADTDPAPVAAG 469
>gi|15607424|ref|NP_214797.1| hypothetical protein Rv0283 [Mycobacterium tuberculosis H37Rv]
gi|15839669|ref|NP_334706.1| hypothetical protein MT0296 [Mycobacterium tuberculosis CDC1551]
gi|31791462|ref|NP_853955.1| hypothetical protein Mb0291 [Mycobacterium bovis AF2122/97]
68 more sequence titles
Length=538
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/516 (37%), Positives = 267/516 (52%), Gaps = 56/516 (10%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SR++ +G+++ + L G+ + +
Sbjct 36 FVTRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLI 95
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G+ G ++ DR+T LYV + QLHPV NLTSARL++G P +P TVKS+EL + P
Sbjct 96 RPNGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPR 155
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTV-ARADSTSPVVQTAVIAMPLE-IDASIDPLQ 182
G +GIPGAP + + + WT+CD + A + + V VIA PLE A L
Sbjct 156 GNLIGIPGAPERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALG 215
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPDMGP 241
+AVLV TW++ R IDL D A+TS +G+ P I+ G+FNA+P+ P
Sbjct 216 PGQAVLVDSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAPP 275
Query 242 WQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT--DKGP------QYYVVLPDGIAQVNATT 293
P IP AG P S G+P IG+V + D G QYY VLPDG+ Q++
Sbjct 276 LTAPIIPDAGNPASFGVPAP--IGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVL 333
Query 294 AAALRATQAHGLVAPPAMVPSLVVR------IAERVYPSPLPDEPLKIVSRPQDPALCWS 347
AA LR ++GL PP + V + + R YPS EP+ +V +DP C
Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPS----EPVSLVDVTRDPVTCAY 389
Query 348 WQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKF---VALQSPDPRY 404
W + G + T+L+G LP+ P A +H V G VAL + +
Sbjct 390 WSKPVGAATSSLTLLAGSALPV-PDA-------VHTVELVGAGNGGVATRVALAAGTGYF 441
Query 405 TE------------SMYYIDPQGVRYGVPN--------AETAKSLGLSSPQN-APWEIVR 443
T+ S++++ GVRYG+ N + ++LGL+ P PW ++
Sbjct 442 TQTVGGGPDAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLS 501
Query 444 LLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGA 479
L V GP LS+ ALL HDTL D P + P A G
Sbjct 502 LFVPGPTLSRADALLAHDTLVPDSRPAR-PVSAEGG 536
>gi|289572868|ref|ZP_06453095.1| conserved membrane protein [Mycobacterium tuberculosis K85]
gi|339630358|ref|YP_004722000.1| hypothetical protein MAF_02850 [Mycobacterium africanum GM041182]
gi|289537299|gb|EFD41877.1| conserved membrane protein [Mycobacterium tuberculosis K85]
gi|339329714|emb|CCC25357.1| putative conserved membrane protein [Mycobacterium africanum
GM041182]
Length=538
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/516 (37%), Positives = 267/516 (52%), Gaps = 56/516 (10%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SR++ +G+++ + L G+ + +
Sbjct 36 FVTRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLI 95
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G+ G ++ DR+T LYV + QLHPV NLTSARL++G P +P TVKS+EL + P
Sbjct 96 RPNGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPR 155
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTV-ARADSTSPVVQTAVIAMPLE-IDASIDPLQ 182
G +GIPGAP + + + WT+CD + A + + V VIA PLE A L
Sbjct 156 GNLIGIPGAPERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALG 215
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPDMGP 241
+AVLV TW++ R IDL D A+TS +G+ P I+ G+FNA+P+ P
Sbjct 216 PGQAVLVDSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAPP 275
Query 242 WQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT--DKGP------QYYVVLPDGIAQVNATT 293
P IP AG P S G+P IG+V + D G QYY VLPDG+ Q++
Sbjct 276 LTAPIIPDAGNPASFGVPAP--IGAVVSSYALKDSGKTMSDTVQYYAVLPDGLQQISPVL 333
Query 294 AAALRATQAHGLVAPPAMVPSLVVR------IAERVYPSPLPDEPLKIVSRPQDPALCWS 347
AA LR ++GL PP + V + + R YPS EP+ +V +DP C
Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPS----EPVSLVDVTRDPVTCAY 389
Query 348 WQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKF---VALQSPDPRY 404
W + G + T+L+G LP+ P A +H V G VAL + +
Sbjct 390 WSKPVGAATSSLTLLAGSALPV-PDA-------VHTVELVGAGNGGVATRVALAAGTGYF 441
Query 405 TE------------SMYYIDPQGVRYGVPN--------AETAKSLGLSSPQN-APWEIVR 443
T+ S++++ GVRYG+ N + ++LGL+ P PW ++
Sbjct 442 TQTVGGGPDAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLS 501
Query 444 LLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGA 479
L V GP LS+ ALL HDTL D P + P A G
Sbjct 502 LFVPGPTLSRADALLAHDTLVPDSRPAR-PVSAEGG 536
>gi|298523754|ref|ZP_07011163.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493548|gb|EFI28842.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=538
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/516 (37%), Positives = 267/516 (52%), Gaps = 56/516 (10%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SR++ +G+++ + L G+ + +
Sbjct 36 FVTRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLI 95
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G+ G ++ DR+T LYV + QLHPV NLTSARL++G P +P TVKS+EL + P
Sbjct 96 RPNGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPR 155
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTV-ARADSTSPVVQTAVIAMPLE-IDASIDPLQ 182
G +GIPGAP + + + WT+CD + A + + V VIA PLE A L
Sbjct 156 GNLIGIPGAPERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALG 215
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPDMGP 241
+AVLV TW++ R IDL D A+TS +G+ P I+ G+FNA+P+ P
Sbjct 216 PGQAVLVDSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAPP 275
Query 242 WQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT--DKGP------QYYVVLPDGIAQVNATT 293
P IP AG P S G+P IG+V + D G QYY VLPDG+ Q++
Sbjct 276 LTAPIIPDAGNPASFGVPAP--IGAVVSSYALKDSGKAISDTVQYYAVLPDGLQQISPVL 333
Query 294 AAALRATQAHGLVAPPAMVPSLVVR------IAERVYPSPLPDEPLKIVSRPQDPALCWS 347
AA LR ++GL PP + V + + R YPS EP+ +V +DP C
Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPS----EPVSLVDVTRDPVTCAY 389
Query 348 WQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKF---VALQSPDPRY 404
W + G + T+L+G LP+ P A +H V G VAL + +
Sbjct 390 WSKPVGAATSSLTLLAGSALPV-PDA-------VHTVELVGAGNGGVATRVALAAGTGYF 441
Query 405 TE------------SMYYIDPQGVRYGVPN--------AETAKSLGLSSPQN-APWEIVR 443
T+ S++++ GVRYG+ N + ++LGL+ P PW ++
Sbjct 442 TQTVGGGPDAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLS 501
Query 444 LLVDGPVLSKDAALLEHDTLPADPSPRKVPAGASGA 479
L V GP LS+ ALL HDTL D P + P A G
Sbjct 502 LFVPGPTLSRADALLAHDTLVPDSRPAR-PVSAEGG 536
>gi|145220932|ref|YP_001131610.1| hypothetical protein Mflv_0328 [Mycobacterium gilvum PYR-GCK]
gi|315442098|ref|YP_004074977.1| hypothetical protein Mspyr1_04300 [Mycobacterium sp. Spyr1]
gi|145213418|gb|ABP42822.1| protein of unknown function DUF690 [Mycobacterium gilvum PYR-GCK]
gi|315260401|gb|ADT97142.1| Protein of unknown function (DUF690) [Mycobacterium sp. Spyr1]
Length=512
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 183/491 (38%), Positives = 251/491 (52%), Gaps = 36/491 (7%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QVSGWRF++RR+ + DTRM DPL+ SRS+ +G ++ V L G L +
Sbjct 30 FVTRHQVSGWRFMVRRMASGVALHDTRMLVDPLRTQSRSVLVGALILVTGLIGCFLFSLI 89
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G +G S+ +R T LYV L Q+HPV NL SARL+ G P NPA VKSSEL +LP
Sbjct 90 RPAGDVGTDSILAERDTAALYVRLGDQVHPVLNLASARLITGRPDNPAMVKSSELDELPR 149
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSH 184
G +GIPGAP V+ + WT+CD A A + V+ A P + L
Sbjct 150 GNMLGIPGAPGRMAVNTTRDAYWTVCDAAAGAVTGVTVIAGA----PDDTGERATVLPDG 205
Query 185 EAVLVSYQGETWIVTTKGRHAIDLTDR-ALTSSMGIPVTARPTPISEGMFNALPDMGPWQ 243
AVL G TW++ R AIDL DR A P PI+ G+FNA+P+
Sbjct 206 HAVLAENNGRTWLLWDGRRSAIDLADRAVAGGVGIGVGVAAPQPIATGLFNAIPEAPALI 265
Query 244 LPPIPAAGAPNSLGLPDDLVIGS-VFQIHTDKGPQYYVVLPDGIAQVNATTAAALRATQA 302
P IP AG P+ LGLP+ +GS V D ++YVVL DG+ ++ AA LR + +
Sbjct 266 TPVIPNAGLPSDLGLPEPFPVGSVVVSYDEDNTLRHYVVLTDGLQPISPVVAAILRNSNS 325
Query 303 HGLVAPPAMVPSLVVRI--AERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQST 360
GL +PP + LV R AE V P E + +V +P +C +W G Q
Sbjct 326 WGLASPPRLDADLVARTPQAEVVDVDAYPAERVTLVDTAAEPVICAAWSEHEGAQESSME 385
Query 361 VLSGRHLPISPSAMNMGIKQIHGTATVYL-----DGG--KFVALQSPDPRYTE---SMYY 410
+ SG LP++ G +TV L GG VAL + + S+++
Sbjct 386 LRSGAALPVA-----------DGVSTVALVSAGAPGGPANQVALPQGTGYFVDNAGSLFW 434
Query 411 IDPQGVRYGVPN------AETAKSLGL-SSPQNAPWEIVRLLVDGPVLSKDAALLEHDTL 463
+ GVRYG+ A+T +LGL ++P P ++ L GP LS+ ALL HDTL
Sbjct 435 LSDTGVRYGIDTGADADGADTVAALGLTTTPLPIPSSVLSLFAAGPTLSRGDALLAHDTL 494
Query 464 PADPSPRKVPA 474
+PSP +V A
Sbjct 495 APNPSPARVEA 505
>gi|54022814|ref|YP_117056.1| hypothetical protein nfa8470 [Nocardia farcinica IFM 10152]
gi|54014322|dbj|BAD55692.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=495
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 183/502 (37%), Positives = 267/502 (54%), Gaps = 47/502 (9%)
Query 6 TTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYFK 65
TT+ QVSG+RFL+RR+EHA+VRRD RM DP++ SR+ A+G+V+ ++LAG +LA +
Sbjct 6 TTRWQVSGYRFLVRRMEHALVRRDVRMLHDPMRSQSRAYAVGLVLGCVVLAGCGILALLR 65
Query 66 PQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPMG 125
PQ K+G L + + +YV++ G +HP NL SARL G+ VK SEL K P G
Sbjct 66 PQDKIGDNVLLIGKESGGVYVVIDGVVHPALNLASARLASGDSGKAVIVKESELGKKPRG 125
Query 126 QTVGIPGAPYATPVSA-GSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSH 184
Q +GIPGAP A G W++CD V + D + + T+V+A LE+ L +
Sbjct 126 QLIGIPGAPAALRYDKDGKGRPWSVCD-VLKVDGSKDLT-TSVLAGDLELGEKASVLGAD 183
Query 185 EAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMGPWQL 244
+A+LV + + ++V R +D++DR +T ++GI P P+ EG+ NA+P++ P
Sbjct 184 QALLVKVKEQAYLVYDNSRARVDMSDRKVTDALGI-TGMTPRPVGEGLLNAIPEVLPIIP 242
Query 245 PPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRAT---- 300
P I GA S + V G V Q+ T+ + YVVL DG+ V TA +R T
Sbjct 243 PKINDPGASVSYQIGGHRV-GDVVQVATEPD-KDYVVLQDGLQPVTKLTADIIRNTYRSS 300
Query 301 -------QAHGLVAPPAMVPSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQ---- 349
Q + AP A SL V YP P IV P C SW+
Sbjct 301 ATSTHIDQTDRVSAPVAA--SLPV----DTYPERQP----SIVEVKDRPISCLSWKPIPA 350
Query 350 ---RSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTA----TVYLDGGKFVALQS--- 399
S G + + +V++G LPI +A + + Q G+ +VY+ G +Q+
Sbjct 351 AADNSDGGRRAELSVITGVALPIPDNAKLVPLAQADGSGANADSVYVPPGTGAFVQTTGI 410
Query 400 -PDPRYTESMYYIDPQGVRYGVPNAETAKSLGLSS-----PQNAPWEIVRLLVDGPVLSK 453
PD +S++Y+ GVRYG+ NA+ K+LGL S P+ APW IV LL GP L +
Sbjct 411 EPDSSRKDSLFYVADTGVRYGIKNADAQKALGLDSESGVKPEPAPWPIVGLLAGGPTLGR 470
Query 454 DAALLEHDTLPADPSPRKVPAG 475
+ A++ HD + DPSP K G
Sbjct 471 EEAMVAHDGVAPDPSPAKQQVG 492
>gi|240173108|ref|ZP_04751766.1| hypothetical protein MkanA1_27596 [Mycobacterium kansasii ATCC
12478]
Length=526
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/498 (36%), Positives = 256/498 (52%), Gaps = 26/498 (5%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SR++ +G +V + L G + +
Sbjct 30 FVTRHQVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVLMGALVLITGLVGCFVFSLI 89
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G+ G + + DR+T LYV + +HPV NLTSARL+ G P NP TVKSSEL + P
Sbjct 90 RPNGQAGSSPVLADRSTAALYVRVGDAVHPVLNLTSARLIAGKPVNPTTVKSSELDRFPR 149
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVA--RADSTSPVVQTAVIAMPLEIDASIDPLQ 182
G +GIPGAP + + WT+CD+V S T + P A L
Sbjct 150 GNLIGIPGAPERMVQNTTRDANWTVCDSVGGQGGRSAHSTAVTVIAGRPDSGGARAAALG 209
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPDMGP 241
S +AVLV +W++ R +DL D A+TS++G+ A P PI+ G+FNA+P+ P
Sbjct 210 SAQAVLVDNGTGSWLLWDGKRSLLDLNDHAVTSALGLGTDALAPRPIALGLFNAIPEAPP 269
Query 242 WQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKG------PQYYVVLPDGIAQVNATTAA 295
P IP AG P +P IG+V + T G QYY VLPDG+ ++ AA
Sbjct 270 LTAPVIPNAGGPPGFAVPAP--IGAVVEALTLNGTGNAETSQYYAVLPDGLQPISPVLAA 327
Query 296 ALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAG 353
LR T ++GL PP + V + ++ + + P + L +V + P C W + AG
Sbjct 328 LLRNTNSYGLQQPPHLGADEVAKLPVSRMLDITRYPVQSLSLVDVARSPVTCAYWSKPAG 387
Query 354 DQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT--VYLDGGKFVALQSPDPRYTE----S 407
+ ++LSG LP++ + + + GT V L G QS T S
Sbjct 388 ATTSSLSLLSGAGLPVADAVHTVDLVGGGGTTATQVALAPGTGYFTQSVGGGATAPATGS 447
Query 408 MYYIDPQGVRYGVPNA-----ETAKSLGLSS-PQNAPWEIVRLLVDGPVLSKDAALLEHD 461
++++ GVRYG+ +T ++LGL + P PW ++ L GP LS+ ALL HD
Sbjct 448 LFWVSDTGVRYGIDTEGEGGRKTVEALGLQTPPLTIPWSVLSLFAAGPTLSRADALLAHD 507
Query 462 TLPADPSPRKVPAGASGA 479
LP D P + P A G
Sbjct 508 ALPPDTKPGR-PVSADGG 524
>gi|296167586|ref|ZP_06849911.1| MPSS family PPE41 protein secretion system protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897129|gb|EFG76740.1| MPSS family PPE41 protein secretion system protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=536
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 182/508 (36%), Positives = 265/508 (53%), Gaps = 35/508 (6%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SR++ +G+V+ V +AG + +
Sbjct 31 FVTRHQVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVLMGVVLLVTAVAGCFVFSLI 90
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G +G S+ DRAT LYV + QLHPV NLTSARL++G P NPATVKSSEL + P
Sbjct 91 RPNGTVGTNSVLADRATAALYVRVGDQLHPVLNLTSARLIVGKPVNPATVKSSELDRFPR 150
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTV---ARADSTSPVVQTAVIAMPLEIDASIDPL 181
G +GIPGAP + + WT+CD V ARA ++ V T + P A L
Sbjct 151 GNLIGIPGAPERMVQNTTRDANWTVCDGVGGTARAVHSTGV--TVIAGRPDSTGARAAKL 208
Query 182 QSHEAVLVSYQGE----TWIVTTKGRHAIDLTDRALTSSMGIPVTAR----PTPISEGMF 233
+ A+LV + TW++ R IDL D A+T+++G+ + P P++ G+F
Sbjct 209 DAGRAILVDSPSDKGITTWLLWDGKRSQIDLADHAVTNALGLGLNNSDIPAPRPVAPGLF 268
Query 234 NALPDMGPWQLPPIPAAGAPNSLGLP---DDLVIGSVFQIHTDKGPQYYVVLPDGIAQVN 290
NA+P P P IP AGAP +P +V+ + ++ +YY VLPDG+ ++
Sbjct 269 NAIPQAPPLAAPGIPNAGAPAGFAVPAPIGAVVVSYALEPNSPGAARYYAVLPDGLQPIS 328
Query 291 ATTAAALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSW 348
AA LR T ++GL PP + V + ++ + + PD + +V +DP C W
Sbjct 329 PVLAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDRQVTLVDAAKDPVTCAYW 388
Query 349 QRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIH--GTATVYLDGGKFVALQS----PDP 402
+ AG + ++LSG LP+ S + + A V L G Q+
Sbjct 389 SKPAGAATSSLSLLSGSALPVPESIRTVDLVGASPATAARVALAPGTGYFAQTVTGGAGA 448
Query 403 RYTESMYYIDPQGVRYGVPN---------AETAKSLGLSSPQN-APWEIVRLLVDGPVLS 452
T S++++ GVRYG+ N +T +LGLS P PW ++ L GP LS
Sbjct 449 PGTGSLFWVSDTGVRYGIDNEAESSAAGRGKTVAALGLSEPAVPVPWSVLALFAGGPTLS 508
Query 453 KDAALLEHDTLPADPSPRKVPAGASGAP 480
+ ALL HD L D P +V A A GAP
Sbjct 509 RADALLAHDGLAPDSRPGRV-ASAEGAP 535
>gi|336460188|gb|EGO39092.1| type VII secretion protein EccB, Actinobacterial [Mycobacterium
avium subsp. paratuberculosis S397]
Length=539
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/515 (35%), Positives = 262/515 (51%), Gaps = 47/515 (9%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QVSGWRF++RR+ I DTRM DPL+ SR++A+G V+ V LAG + +
Sbjct 32 FVTRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLI 91
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G ++ DR+T LYV + +LHPV NLTSARL+ G P +P VKSSEL + P
Sbjct 92 RPNGTAGTNAVLADRSTAALYVRVGEELHPVLNLTSARLITGRPVDPTMVKSSELDRFPR 151
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVAR--ADSTSPVVQTAVIAMPLEIDASIDPLQ 182
G +GIPGAP + + + WT+CD V+ + T + P A L
Sbjct 152 GNLIGIPGAPERMVQNPSTDANWTVCDAVSEPGGHAAHSAGVTVIAGRPDSSGARAATLP 211
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMG-------IPVTARPTPISEGMFNA 235
S +A+L G TW++ R I+LTD A+T+++G IP P PI+ G+FNA
Sbjct 212 SRQALLADRDGTTWLLWDGKRSQINLTDHAITNALGLGQGNSEIPA---PRPIALGLFNA 268
Query 236 LPDMGPWQLPPIPAAGAPNSLGLP--------DDLVIGSVFQIHTDKGPQYYVVLPDGIA 287
+P+ PP+ A G PN+ +V+ + P+YY VLPDG+
Sbjct 269 IPEA-----PPLTAPGIPNAGAPAPFTAPAPIGGVVVSYTLDQSSSGAPRYYAVLPDGLQ 323
Query 288 QVNATTAAALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALC 345
Q++ AA LR T ++GL PP + V + ++ + + PD+ + +V + P +C
Sbjct 324 QISPVLAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVGVVDAAKSPVMC 383
Query 346 WSWQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT---VYLDGGKFVALQS--- 399
W + A S +L+G LP++ S + + AT V L G Q+
Sbjct 384 AYWSKPAKAASSSVNLLTGSALPVAESIRTVDLVGGGSPATAARVALAPGTGYFTQTVGG 443
Query 400 -PDPRYTESMYYIDPQGVRYGVPNA---------ETAKSLGLS-SPQNAPWEIVRLLVDG 448
P+ S++++ GVRYG+ N +T ++LGL+ SP PW ++ L G
Sbjct 444 GPNSPGAGSLFWVSDTGVRYGIDNEAEHSAAGQNKTVEALGLTGSPVPIPWSVLSLFASG 503
Query 449 PVLSKDAALLEHDTLPADPSPRKVPAG---ASGAP 480
P LS+ ALL HD L D P +V A A GAP
Sbjct 504 PTLSRADALLAHDGLAPDQKPGRVTAAAREAEGAP 538
>gi|41409877|ref|NP_962713.1| hypothetical protein MAP3779 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398709|gb|AAS06329.1| hypothetical protein MAP_3779 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=539
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 177/515 (35%), Positives = 261/515 (51%), Gaps = 47/515 (9%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QVSGWRF++RR+ I DTRM DPL+ SR++A+G V+ V LAG + +
Sbjct 32 FVTRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLI 91
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G ++ DR+T LYV + LHPV NLTSARL+ G P +P VKSSEL + P
Sbjct 92 RPNGTAGTNAVLADRSTAALYVRVGEDLHPVLNLTSARLITGRPVDPTMVKSSELDRFPR 151
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVAR--ADSTSPVVQTAVIAMPLEIDASIDPLQ 182
G +GIPGAP + + + WT+CD V+ + T + P A L
Sbjct 152 GNLIGIPGAPERMVQNPSTDANWTVCDAVSEPGGHAAHSAGVTVIAGRPDSSGARAATLP 211
Query 183 SHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMG-------IPVTARPTPISEGMFNA 235
S +A+L G TW++ R I+LTD A+T+++G IP P PI+ G+FNA
Sbjct 212 SRQALLADRDGTTWLLWDGKRSQINLTDHAITNALGLGQGNSEIPA---PRPIALGLFNA 268
Query 236 LPDMGPWQLPPIPAAGAPNSLGLP--------DDLVIGSVFQIHTDKGPQYYVVLPDGIA 287
+P+ PP+ A G PN+ +V+ + P+YY VLPDG+
Sbjct 269 IPEA-----PPLTAPGIPNAGAPAPFTAPAPIGGVVVSYTLDQSSSGAPRYYAVLPDGLQ 323
Query 288 QVNATTAAALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALC 345
Q++ AA LR T ++GL PP + V + ++ + + PD+ + +V + P +C
Sbjct 324 QISPVLAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVGVVDAAKSPVMC 383
Query 346 WSWQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT---VYLDGGKFVALQS--- 399
W + A S +L+G LP++ S + + AT V L G Q+
Sbjct 384 AYWSKPAKAASSSVNLLTGSALPVAESIRTVDLVGGGSPATAARVALAPGTGYFTQTVGG 443
Query 400 -PDPRYTESMYYIDPQGVRYGVPNA---------ETAKSLGLS-SPQNAPWEIVRLLVDG 448
P+ S++++ GVRYG+ N +T ++LGL+ SP PW ++ L G
Sbjct 444 GPNSPGAGSLFWVSDTGVRYGIDNEAEHSAAGQNKTVEALGLTGSPVPIPWSVLSLFASG 503
Query 449 PVLSKDAALLEHDTLPADPSPRKVPAG---ASGAP 480
P LS+ ALL HD L D P +V A A GAP
Sbjct 504 PTLSRADALLAHDGLAPDQKPGRVTAAAREAEGAP 538
>gi|108802516|ref|YP_642712.1| hypothetical protein Mmcs_5556 [Mycobacterium sp. MCS]
gi|119855345|ref|YP_935948.1| hypothetical protein Mkms_5959 [Mycobacterium sp. KMS]
gi|108772935|gb|ABG11656.1| protein of unknown function DUF690 [Mycobacterium sp. MCS]
gi|119698062|gb|ABL95133.1| protein of unknown function DUF690 [Mycobacterium sp. KMS]
Length=504
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 167/479 (35%), Positives = 255/479 (54%), Gaps = 27/479 (5%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
TK QVSGWRFL+RR+ + + RDTRM DPL+ R++++G+++ V++L GA +L+
Sbjct 30 FVTKHQVSGWRFLIRRISNGVALRDTRMLTDPLRRQGRALSIGVMLGVVLLGGAFILSIL 89
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G + DR+TN LYV+++ QLHPV NL SARL++G P P+ VKS E+ KLP+
Sbjct 90 RPAGLAGNRPVLADRSTNALYVMVNDQLHPVLNLASARLIVGKPEEPSLVKSDEIDKLPL 149
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSH 184
G T+GIP AP + + W +CD V D+ + T + P+ PL +
Sbjct 150 GNTLGIPNAPSRMVQNPTRDAKWMVCDAVGGPDAGT----TVIAGDPVGGSGHATPLPAS 205
Query 185 EAVLVSYQG--ETWIVTTKGRHAIDLTDRALTSSMGIPV-TARPTPISEGMFNALPDMGP 241
A+L + G W++ R IDL + A+T+++GI V T P I + N +P+ P
Sbjct 206 SAILATSDGGETNWLIWGNKRSEIDLENAAVTAAVGINVDTPAPRSIDRSLLNLIPESPP 265
Query 242 WQLPPIPAAGAPNSLGLP----DDLVIGS-VFQIHTDKGPQYYVVLPDGIAQVNATTAAA 296
+P + AG P P IG+ V D +YY V DG+ ++ A
Sbjct 266 LVVPFLANAGDPPRFVWPVRGEQPPAIGAVVVDRDQDNALRYYAVTADGLQPISPVIAGI 325
Query 297 LRATQAHGLVAPPAMVPSLVVRI--AERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGD 354
LRA A+GLV PPA+ P V + +E + P++PL ++ +P C W + G
Sbjct 326 LRANDAYGLVEPPALTPDQVAKAPKSEAIPVDNYPEQPLDVLDPSTEPVSCGQWTKLDGA 385
Query 355 QSPQSTVLSGRHLPISPSAMNMGIKQIHGT----ATVYLDGGKFVAL--QSPDPRYTESM 408
+ Q T+L+G+ LP++ A + + T A + G FV + Q PD ES+
Sbjct 386 PTSQLTLLAGQSLPVADDATPVSLLGAGATTAQRAILPRGSGYFVQVTGQQPDSATKESV 445
Query 409 YYIDPQGVRYGVP------NAETAKSLGLSS-PQNAPWEIVRLLVDGPVLSKDAALLEH 460
+++ GVRYG+ A A+SLG+++ P PW ++ L GP LSK AL+ H
Sbjct 446 FWVSDLGVRYGMEAQGEGQTASPAESLGMTAEPLPIPWSVLSLFAPGPTLSKADALVAH 504
>gi|118463197|ref|YP_883992.1| hypothetical protein MAV_4870 [Mycobacterium avium 104]
gi|118164484|gb|ABK65381.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=544
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 173/511 (34%), Positives = 260/511 (51%), Gaps = 53/511 (10%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QVSGWRF++RR+ I DTRM DPL+ SR++A+G V+ V LAG + +
Sbjct 32 FVTRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLI 91
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G ++ DR+T LYV + LHPV NLTSARL++G P NP TVKS+EL + P
Sbjct 92 RPNGTAGTNAVLADRSTAALYVRVGDDLHPVLNLTSARLIVGKPVNPTTVKSAELDRFPR 151
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVAR-------ADSTSPVVQTAVIAMPLEIDAS 177
G +GIPGAP + + + WT+CD+V+ A ST T + P A
Sbjct 152 GNLLGIPGAPERMVQNPSTDANWTVCDSVSEPAPGGHGAHSTG---VTVIAGRPDSSGAR 208
Query 178 IDPLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTAR----PTPISEGMF 233
L S +A+L G TW++ R I+L D A+T+++G+ P PI+ G+F
Sbjct 209 AAALPSQQAILAERDGGTWLLWNGRRSQINLADHAVTNALGLTENNSELPAPRPIALGLF 268
Query 234 NALPDMGPWQLPPIPAAGAPNSLGLPDD--------LVIGSVFQIHTDKGPQYYVVLPDG 285
NA+P+ P + A G PN+ +V+ + P+YY VLPDG
Sbjct 269 NAIPEA-----PSLSAPGIPNAGAPAPFAVPAPIGAVVVSYTLDQSSSGAPRYYAVLPDG 323
Query 286 IAQVNATTAAALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPA 343
+ Q++ AA LR T ++GL PP + V + ++ + + PD+ + +V + P
Sbjct 324 LQQISPVLAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQHVSLVDTAKSPV 383
Query 344 LCWSWQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPR 403
C W + AG + +LSG LPI+ S + + + G + VAL
Sbjct 384 TCAYWSKPAGAATSSLNLLSGSALPIAESIRPVDL--VGGGSPQNGPVATRVALPPGTGY 441
Query 404 YTES------------MYYIDPQGVRYGVPN---------AETAKSLGLS-SPQNAPWEI 441
+T++ ++++ GVRYG+ N +T ++LGLS SP PW +
Sbjct 442 FTQTASGGAGSPGAGSLFWVSDTGVRYGIDNEAEHSAAGHGKTVEALGLSGSPLPIPWSV 501
Query 442 VRLLVDGPVLSKDAALLEHDTLPADPSPRKV 472
+ L GP LS+ ALL HD LP D +P +V
Sbjct 502 LSLFAKGPTLSRADALLAHDGLPPDQAPGRV 532
>gi|145226057|ref|YP_001136711.1| hypothetical protein Mflv_5462 [Mycobacterium gilvum PYR-GCK]
gi|145218520|gb|ABP47923.1| protein of unknown function DUF690 [Mycobacterium gilvum PYR-GCK]
Length=486
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/474 (37%), Positives = 258/474 (55%), Gaps = 17/474 (3%)
Query 6 TTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYFK 65
+TK+QV+G++FL+ RL HA+ R DT M DP + + + G +VA L+ GA LAYFK
Sbjct 6 STKLQVTGYKFLVNRLTHALTRHDTSMRHDPNRSATMAAMAGFLVAALVAVGAVALAYFK 65
Query 66 PQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPMG 125
PQG + + R T++L+V + +LHPV NL SA+L++G P PA VK+SE+ + G
Sbjct 66 PQGLRDNSPIVQARETSELFVTIDSKLHPVLNLVSAQLIVGKPDTPALVKTSEVQNMARG 125
Query 126 QTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSHE 185
VGI GAP A S+WT CD + R + P V TAVIA + S DP S
Sbjct 126 SLVGIAGAPSRVFQPAQKDSVWTACDVIDRPGTARPAVTTAVIASDQQQLLSADP--SAA 183
Query 186 AVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMGPWQLP 245
++ TW++T R ID+ D AL +G+ ISE +FNA+P P P
Sbjct 184 RIVQGPDEATWLLTGDQRRRIDINDTALVLGLGLQRFPTIDVISEELFNAIPAGRPISSP 243
Query 246 PIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRATQAHGL 305
IP G+ + +V+GSV ++ + + +YVVL DG+ +++ AA +R T A+G
Sbjct 244 VIPQGGSVPGYAVSPGIVVGSVIRVPSGEDADWYVVLADGVQKISEVMAAVIRNTNAYGA 303
Query 306 VAPPAMVPSLVVRIAER---VYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQSPQSTVL 362
P + +V R+ + S P+ PL ++P CW W ++AG+Q + TVL
Sbjct 304 DVAPTVSQDVVARLPAANPGLDTSMFPESPLHSSPSMEEPVTCWQWVKAAGEQQSR-TVL 362
Query 363 SGR-HLPISPSAMNMGIKQIHGTATVYL----DGGKFVALQSPDPRY--TESMYYIDPQG 415
+ R LP+ + ++ TV + G FV DPR E+++++ G
Sbjct 363 TFRPGLPLDAEQQMLWQHELVSRPTVSMYAPPGSGFFVQTTGSDPRSPARETLWWVSDAG 422
Query 416 VRYGVPNAE----TAKSLGLSSPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPA 465
VRYG+ ++ T K+LGLSSP APW ++ +L DGP LSK+AAL+ DT+ A
Sbjct 423 VRYGLMSSREGTSTEKALGLSSPIPAPWAVLAILADGPGLSKEAALISQDTIAA 476
>gi|254777311|ref|ZP_05218827.1| hypothetical protein MaviaA2_21941 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=544
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/511 (34%), Positives = 259/511 (51%), Gaps = 53/511 (10%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QVSGWRF++RR+ I DTRM DPL+ SR++A+G V+ V LAG + +
Sbjct 32 FVTRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLI 91
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G ++ DR+T LYV + LHPV NLTSARL++G NP TVKS+EL + P
Sbjct 92 RPNGTAGTNAVLADRSTAALYVRVGDDLHPVLNLTSARLIVGKAVNPTTVKSAELDRFPR 151
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVAR-------ADSTSPVVQTAVIAMPLEIDAS 177
G +GIPGAP + + + WT+CD+V+ A ST T + P A
Sbjct 152 GNLLGIPGAPERMVQNPSTDANWTVCDSVSEPAPGGHGAHSTG---VTVIAGRPDSSGAR 208
Query 178 IDPLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTAR----PTPISEGMF 233
L S +A+L G TW++ R I+L D A+T+++G+ P PI+ G+F
Sbjct 209 AAALPSQQAILAERDGGTWLLWNGRRSQINLADHAVTNALGLTENNSELPAPRPIALGLF 268
Query 234 NALPDMGPWQLPPIPAAGAPNSLGLPDD--------LVIGSVFQIHTDKGPQYYVVLPDG 285
NA+P+ P + A G PN+ +V+ + P+YY VLPDG
Sbjct 269 NAIPEA-----PSLSAPGIPNAGAPAPFAVPAPIGAVVVSYTLDQSSSGAPRYYAVLPDG 323
Query 286 IAQVNATTAAALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPA 343
+ Q++ AA LR T ++GL PP + V + ++ + + PD+ + +V + P
Sbjct 324 LQQISPVLAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQHVSLVDTAKSPV 383
Query 344 LCWSWQRSAGDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPR 403
C W + AG + +LSG LPI+ S + + + G + VAL
Sbjct 384 TCAYWTKPAGAATSSLNLLSGSALPIAESIRPVDL--VGGGSPQNGPVATRVALPPGTGY 441
Query 404 YTES------------MYYIDPQGVRYGVPN---------AETAKSLGLS-SPQNAPWEI 441
+T++ ++++ GVRYG+ N +T ++LGLS SP PW +
Sbjct 442 FTQTAGGGAGSPGAGSLFWVSDTGVRYGIDNEAEHSAAGHGKTVEALGLSGSPLPIPWSV 501
Query 442 VRLLVDGPVLSKDAALLEHDTLPADPSPRKV 472
+ L GP LS+ ALL HD LP D +P +V
Sbjct 502 LSLFAKGPTLSRADALLAHDGLPPDQAPGRV 532
>gi|169630838|ref|YP_001704487.1| hypothetical protein MAB_3759c [Mycobacterium abscessus ATCC
19977]
gi|169242805|emb|CAM63833.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=493
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 178/485 (37%), Positives = 264/485 (55%), Gaps = 28/485 (5%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
M + TT++QVSG+RFL+RR+EHA+VRRD RM DP++ S S+ +GIV+A +++AG A+
Sbjct 1 MARQPTTRLQVSGYRFLVRRMEHALVRRDVRMIHDPMRSQSSSLMVGIVLATVVVAGCAI 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
LA+F+P LG + + T +YV + LHP NL SARL+ GN NP VK SEL+
Sbjct 61 LAFFRPNMPLGDQPIVMGKDTGAVYVRIQDTLHPALNLASARLISGNNENPKPVKDSELA 120
Query 121 KLPMGQTVGIPGAPYATPVS-AGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
K G VGIPGAP + P + G +IWT+CD S++ V T VIA + ++
Sbjct 121 KARRGPLVGIPGAPASIPGALTGDDTIWTVCDVATPPPSST--VTTTVIAGKVTLENGNQ 178
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDM 239
+ LV+ + +++ R A+DLT+ A+T ++ + P PIS + NA+P++
Sbjct 179 EMPKDRYALVTVNSQMYLLYDGKRAAVDLTNPAVTRALRLE-GVTPRPISMNVLNAIPEV 237
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRA 299
PPIP AGA + + + +GSV ++ +YYVVL G+ ++N TA +R
Sbjct 238 PAIAPPPIPDAGAASPITTA-GVRVGSVIKMSRADSAEYYVVLAGGVQRINEVTADLIRF 296
Query 300 TQAHG-----LVAPPAMV--PSLVVRIAERVYPSPLPDEPLKIVSRPQDPALCWSWQ--R 350
+ + G VAP + PSL + + PD KIV P+ LC SW+ +
Sbjct 297 SDSQGAQEIVTVAPDVIAGHPSLNLLAVQT-----FPDRAGKIVDVPEKSVLCSSWKPGQ 351
Query 351 SAGDQSPQSTVLSGRHLPIS----PSAMNMGIKQIHGTATVYLDGGKFVALQSP----DP 402
+ + +L G LP+ P + K+ T Y+ + ++S D
Sbjct 352 EKTQEHASTKLLMGSSLPLKTDQVPVVLAQADKEGPNLDTAYIPPARSAFVRSTGLGGDT 411
Query 403 RYTESMYYIDPQGVRYGVPNAETAKSLGLS-SPQNAPWEIVRLLVDGPVLSKDAALLEHD 461
ES+Y I GVR+G+ N E AK+LGL+ P APW IV LL GP LSK+ AL+ HD
Sbjct 412 GRAESLYLILDTGVRFGIGNLEAAKALGLNVEPVPAPWPIVGLLPPGPRLSKEDALVVHD 471
Query 462 TLPAD 466
+P D
Sbjct 472 GMPPD 476
>gi|333988931|ref|YP_004521545.1| hypothetical protein JDM601_0291 [Mycobacterium sp. JDM601]
gi|333484899|gb|AEF34291.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=540
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 172/494 (35%), Positives = 244/494 (50%), Gaps = 34/494 (6%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
TK QVSGWRF++RR+ + DTRM +PL+ +R++ +G++V + G +
Sbjct 35 FVTKHQVSGWRFVMRRIASGVALHDTRMLVEPLRSQARAVLMGLLVLATVAGGCFVFTLI 94
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
P + D++T+ LYV + QLHPV NLTSARL+ G P NP VKS+ L K+P
Sbjct 95 WPNSAAANDPVLADKSTSALYVRVGDQLHPVLNLTSARLIAGRPVNPTAVKSAGLDKIPR 154
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDAS-IDPLQS 183
G +GIPGAP + + WT+CD+VA +++ VI PL S L +
Sbjct 155 GNLIGIPGAPERMVQNTSRDADWTVCDSVAGSEA-----GVTVIGGPLGDGGSRAGALDA 209
Query 184 HEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI--PVTARPTP--ISEGMFNALPDM 239
H+ VL W++ R IDL DRA+T ++G+ TA PTP IS G+FN +P+
Sbjct 210 HQVVLADNGSGAWLLWDGKRSRIDLADRAITGALGLGEKGTAVPTPRSISTGLFNVIPEA 269
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQ-----YYVVLPDGIAQVNATTA 294
P P IP AG S LP D +G+V H +G + YY VLPDG+ ++ A
Sbjct 270 PPLTAPVIPGAGDKPSFDLPADAPVGAVMAAHALEGNEQGTLRYYAVLPDGLQPISGVVA 329
Query 295 AALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSA 352
A LR T +HGL PP + V R ++ + S P++P+ ++ DP C W R A
Sbjct 330 AVLRNTDSHGLDRPPLLGADDVARLPVSHALDVSRFPEQPVSVIDSVADPLTCAHWSRPA 389
Query 353 G-----DQSPQSTVLSGRHLPISPSAMNMGIKQIHGTATVYLDGGKFVALQSPDPRYTES 407
G + L R + + G+ + G FV S DP S
Sbjct 390 GASTSSLTLLSGSSLPLRDGVRTLDLVGAGVGGTAARVALAPGTGYFVQSVSADPTADHS 449
Query 408 ---MYYIDPQGVRYGV--------PNAETAKSLGLSSPQN-APWEIVRLLVDGPVLSKDA 455
+++I GVRYGV + +T +LGLS P PW ++ GP LS+
Sbjct 450 AGPLFWIADTGVRYGVNTESGTAGSDGDTVAALGLSRPAVPIPWSVLSQFALGPTLSRAD 509
Query 456 ALLEHDTLPADPSP 469
ALL HD L D P
Sbjct 510 ALLAHDGLAPDQRP 523
>gi|118473477|ref|YP_885027.1| hypothetical protein MSMEG_0616 [Mycobacterium smegmatis str.
MC2 155]
gi|118174764|gb|ABK75660.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=518
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/490 (36%), Positives = 246/490 (51%), Gaps = 25/490 (5%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QVSGWRF++RR+ + DTRM DPL+ SR++ G ++ V L G + + F
Sbjct 32 FVTRHQVSGWRFVMRRIASGVALHDTRMLVDPLRTQSRAVLTGALILVTGLVGCFIFSLF 91
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G G ++ DR+T+ LYV + QLHPV NLTSARL+ G+P NP VK+SE+ K P
Sbjct 92 RPGGVPGNNAILADRSTSALYVRVGEQLHPVLNLTSARLISGSPDNPTMVKTSEIDKFPR 151
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDAS-IDPLQS 183
G +GIPGAP +A + + WT+CD V A+ VIA PL D PL
Sbjct 152 GNLLGIPGAPERMVQNAATDAEWTVCDAVGGANP-----GVTVIAGPLGADGERAAPLPP 206
Query 184 HEAVLVSYQGE----TWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPD 238
AVLV E W++ R IDL DRA+T ++G+ A P PI+ G+FNA+P
Sbjct 207 DHAVLVHSDAEPNPGDWLLWDGKRSPIDLADRAVTDALGLGGQALAPRPIAAGLFNAVPA 266
Query 239 MGPWQLPPIPAAGAPNSLGLP-DDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAAL 297
P IP AGA L V V D +YY VL DG+ ++ AA L
Sbjct 267 APALTAPVIPDAGAAPQFELSLPVPVGAVVVAYDADNTARYYAVLSDGLQPISPVLAAIL 326
Query 298 RATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQ 355
R T +HG PP + P V R ++ + S PD P+ +V P C W + +
Sbjct 327 RNTDSHGFAQPPRLGPDEVARTPMSRGLDTSAYPDNPVTLVEASAHPVTCAHWTKPSDAA 386
Query 356 SPQSTVLSGRHLPISPSAMNMGI-----KQIHGTATVYLDGGKFVALQSPDPR--YTESM 408
+VLSG LP++ + + + G FV +P SM
Sbjct 387 ESSLSVLSGAVLPLAEGLHTVDLVGAGAGGAANRVALTPGTGYFVQTVGAEPGSPTAGSM 446
Query 409 YYIDPQGVRYGVPNAETAK---SLGLS-SPQNAPWEIVRLLVDGPVLSKDAALLEHDTLP 464
+++ GVRYG+ AE K +LGLS SP PW ++ GP LS+ AL+ HD +
Sbjct 447 FWVSDTGVRYGIDTAEDDKVVAALGLSTSPLPVPWSVLSQFAAGPALSRGDALVAHDAVS 506
Query 465 ADPSPRKVPA 474
+P+ ++ A
Sbjct 507 TNPNSARMEA 516
>gi|119855163|ref|YP_935768.1| hypothetical protein Mkms_5778 [Mycobacterium sp. KMS]
gi|119697881|gb|ABL94953.1| protein of unknown function DUF690 [Mycobacterium sp. KMS]
Length=505
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/491 (36%), Positives = 266/491 (55%), Gaps = 30/491 (6%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
M L LT+++QV+ F RR A+ R+ DP Q S ++ LG++ +L +A +
Sbjct 1 MALNLTSRLQVTAHYFWNRRNAAALSHHGVRLEYDPEQRRSAALILGVMFTLLAMALMFV 60
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
L++FKP G++G +++ DR T +YV++ G+LHP NL SARL+ G P NP VK++EL
Sbjct 61 LSWFKPAGQVGQSAILADRDTGAVYVMVDGRLHPALNLMSARLIAGQPNNPTFVKAAELE 120
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCD-----TVARADSTSPVVQTAVIAMPLEID 175
K P G VGI GAP A P+ S+S WT+CD T + ++ PVV IA L +
Sbjct 121 KYPQGPLVGIVGAPAAMPIRTASSSDWTVCDTAPTPTSTTSAASEPVVTA--IAGQLTLG 178
Query 176 ASIDPLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFN 234
PLQ +A+L Y T+++ R IDL+++A+ ++G+ TA P P+S +F+
Sbjct 179 QRSAPLQMPDAILGRYGDRTYVIWEGHRSEIDLSNKAVALALGVDSTAPEPIPLSRPLFD 238
Query 235 ALPDMGPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQ----YYVVLPDGIAQVN 290
ALP P P IP AG P+ + D VIGSV + P YV+L DG+ +V+
Sbjct 239 ALPATDPLVSPAIPGAGEPSRWSVADGAVIGSVLTVRDLGQPNAAESLYVLLRDGVQRVS 298
Query 291 ATTAAALRATQAHGLVAPPAMVPSLV--VRIAERVYPSPLPDEPLKIVSRPQDPALCWSW 348
A+ LR+ + G VAP + P + + + +++ S P L++V + C +W
Sbjct 299 PFVASLLRSANSFGDVAPIQVAPDKLAPIPVVDKLPVSFYPATRLRLVDTAVNATTCLAW 358
Query 349 QRSAGDQSPQSTVLSGRHLPIS-PSAMNMGIKQIHGTA--------TVYLDGGK----FV 395
+ A D++ + T+LSG+ LPI SA N +K G VY+ G
Sbjct 359 SKGATDRAAEVTILSGQGLPIPLGSADNRLVKLPKGVRDPESVEADQVYIGPGATNLVMT 418
Query 396 ALQSPDPRYTESMYYIDPQGVRYGVPNAETA-KSLGLS--SPQNAPWEIVRLLVDGPVLS 452
+P E+M++I QGVRYG+ ++ A +LG+S Q APW ++R GP L+
Sbjct 419 TSAAPAASSREAMWWISDQGVRYGIELSDDAFTALGVSPDRSQQAPWPLIRAFAPGPALT 478
Query 453 KDAALLEHDTL 463
+ AL++HD+L
Sbjct 479 RADALVQHDSL 489
>gi|226305377|ref|YP_002765335.1| hypothetical protein RER_18880 [Rhodococcus erythropolis PR4]
gi|226184492|dbj|BAH32596.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=488
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/482 (36%), Positives = 264/482 (55%), Gaps = 23/482 (4%)
Query 6 TTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYFK 65
TT+ QV+G+RFL+RR+EHA+VRRD RM DP++ SR+ +GIV+A L LAG A+LA F+
Sbjct 7 TTRWQVNGYRFLVRRMEHALVRRDVRMLHDPMRSQSRAFTVGIVLAALGLAGCAVLALFR 66
Query 66 PQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPMG 125
PQ K+G + + + ++V + G PV NL SARL+LG+P PA VK+SE+ P G
Sbjct 67 PQDKIGDAEIVVAKESGAMFVAMEGTFRPVLNLASARLILGSPGKPAIVKASEVEAKPRG 126
Query 126 QTVGIPGAPYATPVSAG-STSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSH 184
VGIPGAP A P SA S ++WT+CD+V S + T+V+ + + L
Sbjct 127 ALVGIPGAPSALPESADPSNALWTVCDSVGSDGRKS--LTTSVLVGSSNVGENTTYLTRD 184
Query 185 EAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMGPWQL 244
A LV + ++V R ID+ + A+ ++G+ A+ PIS G N++P++ +
Sbjct 185 RAFLVKSGSDHFLVYDGKRAEIDVDNPAIMRALGLE-GAQARPISAGFLNSIPEVPRIEA 243
Query 245 PPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRATQAHG 304
P I G+ L + +GSV Q+ QYYVVL +GI +V A A + + + G
Sbjct 244 PRIRELGSAPRFPLQNK-TVGSVVQVSVGADLQYYVVLENGIQKVGAALAQLIYFSDSQG 302
Query 305 LVAPPAMVPSLVVRI--AERVYPSPLPDEPLKIVSRPQDPALCWSWQRSA---GDQSPQS 359
++ P + RI + LP +IV P C W S G +S +
Sbjct 303 ATGIASVTPDAISRIPSVRELAVDSLPQVVPEIVDDHDAPVGCLEWAPSRAVDGGESSSA 362
Query 360 T--VLSGRHLPISPSAMNMGIKQIHGTA----TVYLDG--GKFV---ALQSPDPRYTESM 408
T +++G +PI + + Q G+ +V+++ G FV +++ R+ + +
Sbjct 363 TLKLVAGLQVPIPEGGKLVALAQADGSGDNLDSVHVEQGFGGFVQATGIETNSTRH-DGV 421
Query 409 YYIDPQGVRYGVPNAETAKSLGLS-SPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADP 467
+Y+ GV+YGVP+ +A++LGL+ +P APW+I+ LL GP L K AL+ HD + D
Sbjct 422 FYVADTGVKYGVPDETSARALGLTRTPDRAPWQILDLLASGPALEKSNALIAHDGVAPDA 481
Query 468 SP 469
+P
Sbjct 482 TP 483
>gi|183980570|ref|YP_001848861.1| hypothetical protein MMAR_0542 [Mycobacterium marinum M]
gi|183173896|gb|ACC39006.1| conserved membrane protein [Mycobacterium marinum M]
Length=533
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 176/501 (36%), Positives = 260/501 (52%), Gaps = 29/501 (5%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SRS+ +G+++ + L G + +
Sbjct 36 FVTRHQVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRSVLMGVLIFITGLVGCFVFSLI 95
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G++G ++ DR+T LYV + LHPV NLTSARL++G+P NP TVKS+EL + P
Sbjct 96 RPNGQVGSNAVLADRSTAALYVRVGDTLHPVLNLTSARLIVGHPVNPTTVKSTELDRFPR 155
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQ----TAVIAMPLEIDASIDP 180
G +GIPGAP S S WT+CD ++ T + P
Sbjct 156 GNLIGIPGAPERMVQSEARDSDWTVCDAISSGSQGGSAAHSTGVTVIAGSPEPSGHRATA 215
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPDM 239
L + + +LV+ +W++ R +DL D A+T+++G P PI+ G+FNA+P+
Sbjct 216 LGAGQVILVNDGTSSWLLWDGKRSRMDLADHAVTNALGFGTDLPAPRPIAPGLFNAIPEA 275
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT--DKGPQYYVVLPDGIAQVNATTAAAL 297
P P IP AG P + +P IGSV Q +T D QYY VLPDG+ ++ AA L
Sbjct 276 APLAAPAIPDAGNPAAFAVPGP--IGSVVQAYTLGDNSIQYYAVLPDGLQPISPVLAAIL 333
Query 298 RATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQ 355
R T ++GL PP + V + ++ + + P P+ +V +P C W + G
Sbjct 334 RNTNSYGLQQPPRIGADDVAKLPVSRMLDTTRYPATPMHLVDTESNPITCAYWSKPVGAT 393
Query 356 SPQSTVLSGRHLPISPSAMNM-----GIKQIHGTAT-VYLDGGKFVALQS----PDPRYT 405
+ T+LSG LP+ P A++ G Q AT V L G Q+ P T
Sbjct 394 TSSLTLLSGAALPV-PDAVHTVDLVGGGSQNGAVATRVALAPGTGYFTQTAGGGPAAPPT 452
Query 406 ESMYYIDPQGVRYGVPNA-----ETAKSLGLSSPQN-APWEIVRLLVDGPVLSKDAALLE 459
S++++ GVRYG+ +T ++LGL P PW ++ L GP LS+ AL+
Sbjct 453 GSLFWVSDTGVRYGIDTEGEGGRKTVEALGLQDPPVLIPWSVLSLFAPGPTLSRADALMA 512
Query 460 HDTLPADPSPRKVPAGASGAP 480
HD L D P + PA A G P
Sbjct 513 HDGLAPDSKPGR-PASAEGEP 532
>gi|118616919|ref|YP_905251.1| hypothetical protein MUL_1205 [Mycobacterium ulcerans Agy99]
gi|118569029|gb|ABL03780.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=533
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/501 (35%), Positives = 260/501 (52%), Gaps = 29/501 (5%)
Query 5 LTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYF 64
T+ QV+GWRF++RR+ I DTRM DPL+ SRS+ +G+++ + L G + +
Sbjct 36 FVTRHQVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRSVLMGVLIFITGLVGCFVFSLI 95
Query 65 KPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPM 124
+P G++G ++ DR+T LYV + LHPV NLTSARL++G+P NP TVKS+EL + P
Sbjct 96 RPNGQVGSNAVLADRSTAALYVRVGDTLHPVLNLTSARLIVGHPVNPTTVKSTELDRFPR 155
Query 125 GQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQ----TAVIAMPLEIDASIDP 180
G +GIPGAP S S WT+CD ++ T + P
Sbjct 156 GNLIGIPGAPERMVQSEARDSDWTVCDAISSGSQGGSAAHSTGVTVIAGSPEPSGHRATA 215
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTA-RPTPISEGMFNALPDM 239
L + + +LV+ +W++ R +DL D A+T+++G P PI+ G+FNA+P+
Sbjct 216 LGAGQVILVNDGTSSWLLWDGKRSRMDLADHAVTNALGFATDLPAPRPIAPGLFNAIPEA 275
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT--DKGPQYYVVLPDGIAQVNATTAAAL 297
P P IP AG P + +P IGSV Q +T D QYY VLPDG+ ++ AA +
Sbjct 276 APLAAPAIPDAGNPAAFAVPGP--IGSVVQAYTLGDNSIQYYAVLPDGLQPISPVLAAIV 333
Query 298 RATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAGDQ 355
R T ++GL PP + V + ++ + + P P+ +V +P C W + G
Sbjct 334 RNTNSYGLQQPPRIGADDVAKLPVSRMLDTTRYPATPMHLVDTESNPITCAYWSKPVGAT 393
Query 356 SPQSTVLSGRHLPISPSAMNM-----GIKQIHGTAT-VYLDGGKFVALQS----PDPRYT 405
+ T+LSG LP+ P A++ G Q AT V L G Q+ P T
Sbjct 394 TSSLTLLSGAALPV-PGAVHTVDLVGGGSQNGAVATRVALAPGTGYFTQTAGGGPAAPPT 452
Query 406 ESMYYIDPQGVRYGVPNA-----ETAKSLGLSSPQN-APWEIVRLLVDGPVLSKDAALLE 459
S++++ GVRYG+ +T ++LGL P PW ++ L GP LS+ AL+
Sbjct 453 GSLFWVSDTGVRYGIDTEGEGGRKTVEALGLQDPPVLIPWSVLSLFAPGPTLSRADALMA 512
Query 460 HDTLPADPSPRKVPAGASGAP 480
HD L D P + PA A G P
Sbjct 513 HDGLAPDSKPGR-PASAEGGP 532
>gi|340626794|ref|YP_004745246.1| hypothetical protein MCAN_18001 [Mycobacterium canettii CIPT
140010059]
gi|340004984|emb|CCC44132.1| putative conserved membrane protein [Mycobacterium canettii CIPT
140010059]
Length=506
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/492 (34%), Positives = 271/492 (56%), Gaps = 24/492 (4%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
GL L+T+ QV+G++FL RR A+ R RM +P + + ++ + A++I GA L
Sbjct 14 GLGLSTRTQVTGYQFLARRTAMALTRWRVRMEIEPGRRQTLAVVASVSAALVICLGALLW 73
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSK 121
++ P G+L + + DR + LYV + +L+P NL SARL+ G P NP V+SS+++
Sbjct 74 SFISPSGQLNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRPDNPHLVRSSQIAT 133
Query 122 LPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPV--VQTAVIAMPLEIDASID 179
+P G VGIPGAP + + S W +CDTVA + S + V VI ++
Sbjct 134 MPRGPLVGIPGAPSSFSPKSPPASSWLVCDTVATSSSIGSLQGVTVTVIDGTPDLTGHRQ 193
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI--PVTARPTPISEGMFNALP 237
L +AV++ Y G+ W++ R I+ T+RA+ +G+ ++ P+S +F+ALP
Sbjct 194 ILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQARPMSRALFDALP 253
Query 238 DMGPWQL-PPIPAAGAPNSL-GLPDDLVIGSVFQIHTDKGPQYY-VVLPDGIAQVNATTA 294
+GP L P +P AG P + G P IG+V GPQ Y +VL DG+ + A
Sbjct 254 -VGPELLVPEVPNAGGPATFPGAPGP--IGTVIVTPQISGPQQYSLVLGDGVQTLPPLVA 310
Query 295 AALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSA 352
L+ + G P + PS + + + R+ S PD PL++V + P+ CW W+R+A
Sbjct 311 QILQNADSAGNTKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHPSTCWWWERTA 370
Query 353 GDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT------VYL--DGGKFVAL--QSPDP 402
G+ + V+SG +P++ + MN + + + VY D FVA+ +P
Sbjct 371 GENRARVRVVSGPTIPVAATEMNKVVSLVKADTSGRQADQVYFGPDHANFVAVTGNNPGA 430
Query 403 RYTESMYYIDPQGVRYGVPNAETAK-SLGLS-SPQNAPWEIVRLLVDGPVLSKDAALLEH 460
+ +ES++++ G R+GV +++ A+ +LGL+ +P APW +RLL GP LS+ AL+EH
Sbjct 431 QTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPTLSRADALVEH 490
Query 461 DTLPADPSPRKV 472
DTLP D +P ++
Sbjct 491 DTLPMDMTPAEL 502
>gi|229489476|ref|ZP_04383339.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229323573|gb|EEN89331.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=488
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/482 (35%), Positives = 264/482 (55%), Gaps = 23/482 (4%)
Query 6 TTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALLAYFK 65
TT+ QV+G+RFL+RR+EHA+VRRD RM DP++ SR+ +GIV+A L LAG A+LA F+
Sbjct 7 TTRWQVNGYRFLVRRMEHALVRRDVRMLHDPMRSQSRAFTVGIVLAALGLAGCAVLALFR 66
Query 66 PQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSKLPMG 125
PQ ++G + + + ++V + G PV NL SARL+LG+P PA VK+SE+ P G
Sbjct 67 PQDRIGDAEIVVAKESGAMFVAMEGTFRPVLNLASARLILGSPGKPAVVKASEVEAKPRG 126
Query 126 QTVGIPGAPYATPVSAGSTS-IWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDPLQSH 184
VGIPGAP A P SA T+ WT+CD+V S + T+V+ + + L +
Sbjct 127 ALVGIPGAPSALPESADPTNAAWTVCDSVGSDGRKS--LTTSVLVGSSNVGENSTYLTND 184
Query 185 EAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGIPVTARPTPISEGMFNALPDMGPWQL 244
A LV + ++V R ID+ D A+ ++G+ A+ PIS G N++P++ +
Sbjct 185 RAFLVKSGSDHFLVYDGKRAEIDVDDPAIMRALGLE-GAQARPISIGFLNSIPEVPRIEA 243
Query 245 PPIPAAGAPNSLGLPDDLVIGSVFQIHTDKGPQYYVVLPDGIAQVNATTAAALRATQAHG 304
P I G+ L + +GSV Q+ PQYYVVL +GI ++ A A + + + G
Sbjct 244 PRIRQLGSAPRFPLQNK-TVGSVVQVSVGADPQYYVVLENGIQKIGAAVAQLIYFSDSQG 302
Query 305 LVAPPAMVPSLVVRI--AERVYPSPLPDEPLKIVSRPQDPALCWSWQRS---AGDQSPQS 359
++ P + RI + LP +IV P C W S G +S +
Sbjct 303 ATGIASVTPDAISRIPSVSELAVDLLPRVVPEIVDDHGAPVGCLEWAPSPAVEGAESSSA 362
Query 360 T--VLSGRHLPISPSAMNMGIKQIHGTA----TVYLDG--GKFV---ALQSPDPRYTESM 408
T +++G +PI + + Q G+ V+++ G FV +++ R+ + +
Sbjct 363 TLKLVAGLRVPIPEGGKLVSLAQADGSGDNLDNVHVEQGFGGFVQATGIETNSTRH-DGV 421
Query 409 YYIDPQGVRYGVPNAETAKSLGLS-SPQNAPWEIVRLLVDGPVLSKDAALLEHDTLPADP 467
+Y+ GV+YGVP+ +A++LGL+ +P APW+++ LL GP L K AL+ HD + D
Sbjct 422 FYVADTGVKYGVPDEISARALGLTRTPDRAPWQMLDLLASGPALEKSNALIAHDGIAPDT 481
Query 468 SP 469
+P
Sbjct 482 AP 483
>gi|15611031|ref|NP_218412.1| hypothetical protein Rv3895c [Mycobacterium tuberculosis H37Rv]
gi|15843526|ref|NP_338563.1| hypothetical protein MT4011 [Mycobacterium tuberculosis CDC1551]
gi|148663762|ref|YP_001285285.1| hypothetical protein MRA_3934 [Mycobacterium tuberculosis H37Ra]
61 more sequence titles
Length=495
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/485 (36%), Positives = 256/485 (53%), Gaps = 27/485 (5%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRM-FDDPLQFYSRSIALGIVVAVLILAGAA 59
M L L+ + Q SG F RRL A R RM DD Q + ++AL +V+ +
Sbjct 1 MPLSLSNRDQNSGHLFYNRRLRAATTRFSVRMKHDDRKQ--TAALALSMVLVAIAAGWMM 58
Query 60 LLAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSEL 119
LL KP G +G +++ DR + LY + G+L+P NLTSARL G P VK +E+
Sbjct 59 LLNVLKPTGIVGDSAIIGDRDSGALYARIDGRLYPALNLTSARLATGTAGQPTWVKPAEI 118
Query 120 SKLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
+K P G VGIPGAP A PV+ G+ S W +CDT R S V T+ IA P+
Sbjct 119 AKYPTGPLVGIPGAPAAMPVNRGAVSAWAVCDTAGRPRSADKPVVTS-IAGPITGGGRAT 177
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI-PVTARPTPISEGMFNALPD 238
L+ +LV++ G T+++ R ID T+RA+T S+G+ P P IS +F+ LP
Sbjct 178 HLRDDAGLLVTFDGSTYVIWGGKRSQIDPTNRAVTLSLGLDPGVTSPIQISRALFDGLPA 237
Query 239 MGPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT-DKGPQYYVVLPDGIAQVNATTAAAL 297
P ++P +P AG P++ +P V GSV Q T G Q+YV+LPDG+ ++++ A L
Sbjct 238 TEPLRVPAVPEAGTPSTW-VPGARV-GSVLQAQTAGGGSQFYVLLPDGVQKISSFVADLL 295
Query 298 RATQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEP---LKIVSRPQDPALCWSWQRSAGD 354
R+ ++G AP + P ++V + V P+ P L V DP C SW++++ D
Sbjct 296 RSANSYGAAAPRVVTPDVLVHTPQ-VTSLPVEYYPAGRLNFVDTAADPTTCVSWEKASTD 354
Query 355 QSPQSTVLSGRHLPISPSAMNMGIKQIH---------GTATVYLDG-GKFVALQSP--DP 402
+ V +GR LP+ PS + ++ + T + L G FV S
Sbjct 355 PQARVAVYNGRGLPVPPSMDSRIVRLVRDDRAPASVVATQVLVLPGAANFVTSTSGVITA 414
Query 403 RYTESMYYIDPQGVRYGVPNAE-TAKSLGL--SSPQNAPWEIVRLLVDGPVLSKDAALLE 459
ES++++ GVR+G+ N E T ++LGL + APW ++R GP LS+DAALL
Sbjct 415 ESRESLFWVSGNGVRFGIANDEATLRALGLDPGAAVQAPWPLLRTFAAGPALSRDAALLA 474
Query 460 HDTLP 464
DT+P
Sbjct 475 RDTVP 479
>gi|308371541|ref|ZP_07667197.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium
tuberculosis SUMu004]
gi|308336349|gb|EFP25200.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium
tuberculosis SUMu004]
Length=496
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/485 (36%), Positives = 256/485 (53%), Gaps = 27/485 (5%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRM-FDDPLQFYSRSIALGIVVAVLILAGAA 59
M L L+ + Q SG F RRL A R RM DD Q + ++AL +V+ +
Sbjct 1 MPLSLSNRDQNSGHLFYNRRLRAATTRFSVRMKHDDRKQ--TAALALSMVLVAIAAGWMM 58
Query 60 LLAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSEL 119
LL KP G +G +++ DR + LY + G+L+P NLTSARL G P VK +E+
Sbjct 59 LLNVLKPTGIVGDSAIIGDRDSGALYARIDGRLYPALNLTSARLATGTAGQPTWVKPAEI 118
Query 120 SKLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASID 179
+K P G VGIPGAP A PV+ G+ S W +CDT R S V T+ IA P+
Sbjct 119 AKYPTGPLVGIPGAPAAMPVNRGAVSAWAVCDTAGRPRSADKPVVTS-IAGPITGGGRAT 177
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI-PVTARPTPISEGMFNALPD 238
L+ +LV++ G T+++ R ID T+RA+T S+G+ P P IS +F+ LP
Sbjct 178 HLRDDAGLLVTFDGSTYVIWGGKRSQIDPTNRAVTLSLGLDPGVTSPIQISRALFDGLPA 237
Query 239 MGPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT-DKGPQYYVVLPDGIAQVNATTAAAL 297
P ++P +P AG P++ +P V GSV Q T G Q+YV+LPDG+ ++++ A L
Sbjct 238 TEPLRVPAVPEAGTPSTW-VPGARV-GSVLQAQTAGGGSQFYVLLPDGVQKISSFVADLL 295
Query 298 RATQAHGLVAPPAMVPSLVVRIAERVYPSPLPDEP---LKIVSRPQDPALCWSWQRSAGD 354
R+ ++G AP + P ++V + V P+ P L V DP C SW++++ D
Sbjct 296 RSANSYGAAAPRVVTPDVLVHTPQ-VTSLPVEYYPAGRLNFVDTAADPTTCVSWEKASTD 354
Query 355 QSPQSTVLSGRHLPISPSAMNMGIKQIH---------GTATVYLDG-GKFVALQSP--DP 402
+ V +GR LP+ PS + ++ + T + L G FV S
Sbjct 355 PQARVAVYNGRGLPVPPSMDSRIVRLVRDDRAPASVVATQVLVLPGAANFVTSTSGVITA 414
Query 403 RYTESMYYIDPQGVRYGVPNAE-TAKSLGL--SSPQNAPWEIVRLLVDGPVLSKDAALLE 459
ES++++ GVR+G+ N E T ++LGL + APW ++R GP LS+DAALL
Sbjct 415 ESRESLFWVSGNGVRFGIANDEATLRALGLDPGAAVQAPWPLLRTFAAGPALSRDAALLA 474
Query 460 HDTLP 464
DT+P
Sbjct 475 RDTVP 479
>gi|296164774|ref|ZP_06847336.1| MPSS family PPE41 protein secretion system protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295899875|gb|EFG79319.1| MPSS family PPE41 protein secretion system protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=505
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/488 (35%), Positives = 261/488 (54%), Gaps = 23/488 (4%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
GL L+T+ QV+G++FL RR A+ R RM +P + + ++ + A++I GA L
Sbjct 14 GLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGRRQTLAVVASVSAALVICLGALLY 73
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSK 121
++ P G++G + + DR + LYV + +L+P NL SARL+ G P NP VKS++++
Sbjct 74 SFLSPAGQVGDSPIIADRDSGALYVRVGDRLYPALNLASARLITGRPDNPHLVKSNQIAS 133
Query 122 LPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTS--PVVQTAVIAMPLEIDASID 179
LP G VGIPGAP ++ STS W +CDTVA + S V VI ++
Sbjct 134 LPRGPLVGIPGAPSNFHTTSPSTSSWLVCDTVATSTGVSAPSGVTVTVIDGNPDLSNHRH 193
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI--PVTARPTPISEGMFNALP 237
L +AV++SY G+ W++ R ID T+R++ +G+ + P+S +F+ALP
Sbjct 194 VLNGTDAVVLSYGGDAWVIREGRRSRIDATNRSVLLPLGLTPEQVGQAKPMSRALFDALP 253
Query 238 DMGPWQLPPIPAAGAPNSL-GLPDDLVIGSVFQIHTDKGPQYY-VVLPDGIAQVNATTAA 295
+P I AG+ S G P IG+V GPQ Y +VL DG+ + A
Sbjct 254 VGPELTVPQIQNAGSAASFPGAPGP--IGTVIVTPQISGPQQYSLVLADGLQTLPPLVAQ 311
Query 296 ALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSAG 353
L+ G P + PS + + + ++ S PD PL + ++PA CW WQ+++G
Sbjct 312 ILQ-NAGPGNTKPVTVEPSALAKMPVVNKLDLSSYPDAPLNVADIRENPATCWWWQKTSG 370
Query 354 DQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT------VYL--DGGKFVALQSPDP--R 403
+ + V+SG +P++ N + + T V+ D G FVA+ DP +
Sbjct 371 ENRARIQVISGATIPVAAKDENKVVSLVKADTTGREADQVFFGPDYGNFVAVTGNDPGAK 430
Query 404 YTESMYYIDPQGVRYGVPNA-ETAKSLGL-SSPQNAPWEIVRLLVDGPVLSKDAALLEHD 461
TES++++ G R+GV + E ++LGL + P APW +RLL GP LS+ AL+EHD
Sbjct 431 TTESLWWLTDAGARFGVDDTREVREALGLKTKPSLAPWVALRLLPQGPTLSRADALVEHD 490
Query 462 TLPADPSP 469
TLP D SP
Sbjct 491 TLPMDTSP 498
>gi|333988698|ref|YP_004521312.1| hypothetical protein JDM601_0058 [Mycobacterium sp. JDM601]
gi|333484666|gb|AEF34058.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=499
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/487 (36%), Positives = 258/487 (53%), Gaps = 29/487 (5%)
Query 1 MGLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAAL 60
M L L+ + Q SG F RRL A + RM D + + +I L +V+ + + L
Sbjct 1 MPLSLSNRDQNSGHLFYNRRLRAATTKFSVRMKHDDRK-QTAAIVLSVVLIFIGMGWMLL 59
Query 61 LAYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELS 120
L +P G + +++ DR + +Y ++G+L+P N+TSARL +GN P VK E++
Sbjct 60 LNVLRPAGIVRTSAIVGDRDSGAIYARINGRLYPALNMTSARLAVGNAELPTWVKPPEIA 119
Query 121 KLPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPVVQTAVIAMPLEIDASIDP 180
K P G +GIPGAP + + G+ S W +CDT P V TA IA L P
Sbjct 120 KYPTGPMIGIPGAPASLIANTGAPSAWAVCDTAGSPRRVEPPVVTA-IAGTLSPAGRAAP 178
Query 181 LQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI-PVTARPTPISEGMFNALPDM 239
L S AVL +Q T+++ R +D DRA+T S+GI P T P +S +F+ALP
Sbjct 179 LASDAAVLTRFQDATYVIWGGKRSQVDPADRAITLSLGIDPGTTVPVEMSRALFDALPST 238
Query 240 GPWQLPPIPAAGAPNSLGLPDDLVIGSVFQIHT-DKGPQYYVVLPDGIAQVNATTAAALR 298
P ++P IP AG P S +P V G+V + T G Q+YV+LPDG+ ++ + A +R
Sbjct 239 EPLRVPAIPLAGTP-SQWVPGSQV-GTVLETRTAGGGSQFYVLLPDGVQKITSFVADLIR 296
Query 299 ATQAHGLVAPPAMVPSLVVRIAERVYPSPL---PDEPLKIVSRPQDPALCWSWQRSAGDQ 355
+ + G VAP + P +V I E V P+ P+ LK V DP C SW+++ D+
Sbjct 297 SANSFGSVAPLVISPDKLVNIPE-VGTLPVEYYPNSRLKFVDTAADPTTCVSWEKAPTDR 355
Query 356 SPQSTVLSGRHLPISPSAMNMGIKQIHGTAT---------VYLDGGKFV-----ALQSPD 401
+ TV +GR LP+SP+ N ++ + T + L G + AL D
Sbjct 356 QARITVFNGRGLPVSPAMDNRIVRLVRDDRTPGSVVANQVLVLPGATNLVTSTSALLESD 415
Query 402 PRYTESMYYIDPQGVRYGV-PNAETAKSLGL--SSPQNAPWEIVRLLVDGPVLSKDAALL 458
R E+++++ P GVR+G+ ET + LGL +S Q APW ++R GP LS+ AALL
Sbjct 416 SR--ETLFWVSPNGVRFGIAAEDETLRGLGLDPASAQQAPWPLLRTFAAGPELSRHAALL 473
Query 459 EHDTLPA 465
DTLP+
Sbjct 474 ARDTLPS 480
>gi|31792971|ref|NP_855464.1| hypothetical protein Mb1811 [Mycobacterium bovis AF2122/97]
gi|121637684|ref|YP_977907.1| hypothetical protein BCG_1815 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990168|ref|YP_002644855.1| hypothetical protein JTY_1799 [Mycobacterium bovis BCG str. Tokyo
172]
8 more sequence titles
Length=506
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 167/492 (34%), Positives = 271/492 (56%), Gaps = 24/492 (4%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
GL L+T+ QV+G++FL RR A+ R RM +P + + ++ + A++I GA L
Sbjct 14 GLGLSTRTQVTGYQFLARRTAMALTRWHVRMEIEPGRRQTLAVVASVSAALVICLGALLW 73
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSK 121
++ P G+L + + DR + LYV + +L+P NL SARL+ G P NP V+SS+++
Sbjct 74 SFISPSGQLNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRPDNPHLVRSSQIAT 133
Query 122 LPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPV--VQTAVIAMPLEIDASID 179
+P G VGIPGAP + + S W +CDTVA + S + V VI ++
Sbjct 134 MPRGPLVGIPGAPSSFSPKSPPASSWLVCDTVATSSSIGSLQGVTVTVIDGTPDLTGHRQ 193
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI--PVTARPTPISEGMFNALP 237
L +AV++ Y G+ W++ R I+ T+RA+ +G+ ++ P+S +F+ALP
Sbjct 194 ILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQARPMSRALFDALP 253
Query 238 DMGPWQL-PPIPAAGAPNSL-GLPDDLVIGSVFQIHTDKGPQYY-VVLPDGIAQVNATTA 294
+GP L P +P AG P + G P IG+V GPQ Y +VL DG+ + A
Sbjct 254 -VGPELLVPEVPNAGGPATFPGAPGP--IGTVIVTPQISGPQQYSLVLGDGVQTLPPLVA 310
Query 295 AALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSA 352
L+ + G P + PS + + + R+ S PD PL++V + P+ CW W+R+A
Sbjct 311 QILQNAGSAGNTKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHPSTCWWWERTA 370
Query 353 GDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT------VYL--DGGKFVAL--QSPDP 402
G+ + V+SG +P++ + MN + + + VY D FVA+ +P
Sbjct 371 GENRARVRVVSGPTIPVAATEMNKVVSLVKADTSGRQADQVYFGPDHANFVAVTGNNPGA 430
Query 403 RYTESMYYIDPQGVRYGVPNAETAK-SLGLS-SPQNAPWEIVRLLVDGPVLSKDAALLEH 460
+ +ES++++ G R+GV +++ A+ +LGL+ +P APW +RLL GP LS+ AL+EH
Sbjct 431 QTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPTLSRADALVEH 490
Query 461 DTLPADPSPRKV 472
DTLP D +P ++
Sbjct 491 DTLPMDMTPAEL 502
>gi|15608920|ref|NP_216298.1| hypothetical protein Rv1782 [Mycobacterium tuberculosis H37Rv]
gi|15841251|ref|NP_336288.1| hypothetical protein MT1832 [Mycobacterium tuberculosis CDC1551]
gi|148661590|ref|YP_001283113.1| hypothetical protein MRA_1797 [Mycobacterium tuberculosis H37Ra]
64 more sequence titles
Length=506
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 167/492 (34%), Positives = 271/492 (56%), Gaps = 24/492 (4%)
Query 2 GLRLTTKVQVSGWRFLLRRLEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVLILAGAALL 61
GL L+T+ QV+G++FL RR A+ R RM +P + + ++ + A++I GA L
Sbjct 14 GLGLSTRTQVTGYQFLARRTAMALTRWRVRMEIEPGRRQTLAVVASVSAALVICLGALLW 73
Query 62 AYFKPQGKLGGTSLFTDRATNQLYVLLSGQLHPVYNLTSARLVLGNPANPATVKSSELSK 121
++ P G+L + + DR + LYV + +L+P NL SARL+ G P NP V+SS+++
Sbjct 74 SFISPSGQLNESPIIADRDSGALYVRVGDRLYPALNLASARLITGRPDNPHLVRSSQIAT 133
Query 122 LPMGQTVGIPGAPYATPVSAGSTSIWTLCDTVARADSTSPV--VQTAVIAMPLEIDASID 179
+P G VGIPGAP + + S W +CDTVA + S + V VI ++
Sbjct 134 MPRGPLVGIPGAPSSFSPKSPPASSWLVCDTVATSSSIGSLQGVTVTVIDGTPDLTGHRQ 193
Query 180 PLQSHEAVLVSYQGETWIVTTKGRHAIDLTDRALTSSMGI--PVTARPTPISEGMFNALP 237
L +AV++ Y G+ W++ R I+ T+RA+ +G+ ++ P+S +F+ALP
Sbjct 194 ILSGSDAVVLRYGGDAWVIREGRRSRIEPTNRAVLLPLGLTPEQVSQARPMSRALFDALP 253
Query 238 DMGPWQL-PPIPAAGAPNSL-GLPDDLVIGSVFQIHTDKGPQYY-VVLPDGIAQVNATTA 294
+GP L P +P AG P + G P IG+V GPQ Y +VL DG+ + A
Sbjct 254 -VGPELLVPEVPNAGGPATFPGAPGP--IGTVIVTPQISGPQQYSLVLGDGVQTLPPLVA 310
Query 295 AALRATQAHGLVAPPAMVPSLVVR--IAERVYPSPLPDEPLKIVSRPQDPALCWSWQRSA 352
L+ + G P + PS + + + R+ S PD PL++V + P+ CW W+R+A
Sbjct 311 QILQNAGSAGNTKPLTVEPSTLAKMPVVNRLDLSAYPDNPLEVVDIREHPSTCWWWERTA 370
Query 353 GDQSPQSTVLSGRHLPISPSAMNMGIKQIHGTAT------VYL--DGGKFVAL--QSPDP 402
G+ + V+SG +P++ + MN + + + VY D FVA+ +P
Sbjct 371 GENRARVRVVSGPTIPVAATEMNKVVSLVKADTSGRQADQVYFGPDHANFVAVTGNNPGA 430
Query 403 RYTESMYYIDPQGVRYGVPNAETAK-SLGLS-SPQNAPWEIVRLLVDGPVLSKDAALLEH 460
+ +ES++++ G R+GV +++ A+ +LGL+ +P APW +RLL GP LS+ AL+EH
Sbjct 431 QTSESLWWVTDAGARFGVEDSKEARDALGLTLTPSLAPWVALRLLPQGPTLSRADALVEH 490
Query 461 DTLPADPSPRKV 472
DTLP D +P ++
Sbjct 491 DTLPMDMTPAEL 502
Lambda K H
0.317 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1017007352256
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40