BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3872

Length=99
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57117163|ref|YP_178021.1|  PE family-related protein [Mycobact...   194    3e-48
gi|15843503|ref|NP_338540.1|  hypothetical protein MT3986 [Mycoba...   192    1e-47
gi|31795046|ref|NP_857539.1|  PE family-like protein [Mycobacteri...   192    1e-47
gi|340628844|ref|YP_004747296.1|  PE family-like protein [Mycobac...   190    6e-47
gi|308406276|ref|ZP_07495784.2|  PE family protein [Mycobacterium...   187    5e-46
gi|289445474|ref|ZP_06435218.1|  PE family protein [Mycobacterium...   185    2e-45
gi|323717455|gb|EGB26659.1|  PE family protein [Mycobacterium tub...   157    6e-37
gi|240168351|ref|ZP_04747010.1|  PPE family protein [Mycobacteriu...   125    2e-27
gi|240170200|ref|ZP_04748859.1|  PE family protein, PE34 [Mycobac...   100    1e-19
gi|240168503|ref|ZP_04747162.1|  PE family protein, PE34 [Mycobac...  99.8    1e-19
gi|118619500|ref|YP_907832.1|  PE family protein [Mycobacterium u...  99.8    1e-19
gi|289443461|ref|ZP_06433205.1|  PE family protein [Mycobacterium...  97.1    7e-19
gi|289447594|ref|ZP_06437338.1|  PE family protein [Mycobacterium...  97.1    8e-19
gi|289750551|ref|ZP_06509929.1|  predicted protein [Mycobacterium...  97.1    9e-19
gi|289754074|ref|ZP_06513452.1|  predicted protein [Mycobacterium...  97.1    9e-19
gi|183982898|ref|YP_001851189.1|  PE family protein [Mycobacteriu...  96.7    1e-18
gi|289746084|ref|ZP_06505462.1|  PE family protein [Mycobacterium...  96.7    1e-18
gi|240170199|ref|ZP_04748858.1|  PE family protein [Mycobacterium...  95.9    2e-18
gi|289763927|ref|ZP_06523305.1|  PE family protein [Mycobacterium...  95.9    2e-18
gi|118467647|ref|YP_884481.1|  PE family protein [Mycobacterium s...  91.7    3e-17
gi|183985418|ref|YP_001853709.1|  PE family protein [Mycobacteriu...  88.2    3e-16
gi|31794916|ref|NP_857409.1|  PE family protein [Mycobacterium bo...  84.0    7e-15
gi|15843367|ref|NP_338404.1|  PE family protein [Mycobacterium tu...  83.2    1e-14
gi|308372643|ref|ZP_07429349.2|  PE family protein [Mycobacterium...  80.9    6e-14
gi|145221364|ref|YP_001132042.1|  PE-like protein [Mycobacterium ...  77.8    6e-13
gi|296164967|ref|ZP_06847522.1|  PE family protein [Mycobacterium...  75.1    3e-12
gi|120401104|ref|YP_950933.1|  PE-like protein [Mycobacterium van...  72.8    2e-11
gi|183980219|ref|YP_001848510.1|  PE family protein, PE35 [Mycoba...  67.4    7e-10
gi|108797049|ref|YP_637246.1|  PE-like protein [Mycobacterium sp....  52.4    2e-05
gi|145226055|ref|YP_001136709.1|  PE domain-containing protein [M...  42.4    0.026
gi|118617769|ref|YP_906101.1|  PE family protein [Mycobacterium u...  37.4    0.80 
gi|317506395|ref|ZP_07964203.1|  PE family protein [Segniliparus ...  37.4    0.82 
gi|320161456|ref|YP_004174680.1|  thiol-disulfide oxidoreductase ...  36.2    1.5  
gi|169627151|ref|YP_001700800.1|  PE family protein [Mycobacteriu...  35.4    2.9  
gi|15839671|ref|NP_334708.1|  PE family protein [Mycobacterium tu...  35.4    2.9  
gi|118616921|ref|YP_905253.1|  PE family protein [Mycobacterium u...  35.0    3.6  
gi|240168499|ref|ZP_04747158.1|  PE family protein, PE5 [Mycobact...  34.7    4.5  
gi|118616216|ref|YP_904548.1|  PE-PGRS family protein family prot...  34.3    5.6  
gi|183984754|ref|YP_001853045.1|  PE-PGRS family protein [Mycobac...  33.9    8.8  


>gi|57117163|ref|YP_178021.1| PE family-related protein [Mycobacterium tuberculosis H37Rv]
 gi|148663739|ref|YP_001285262.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|167967454|ref|ZP_02549731.1| hypothetical protein MtubH3_05222 [Mycobacterium tuberculosis 
H37Ra]
 9 more sequence titles
 Length=99

 Score =  194 bits (494),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ
Sbjct  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  99
           LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE
Sbjct  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  99


>gi|15843503|ref|NP_338540.1| hypothetical protein MT3986 [Mycobacterium tuberculosis CDC1551]
 gi|289572130|ref|ZP_06452357.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289764062|ref|ZP_06523440.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|13883877|gb|AAK48354.1| hypothetical protein MT3986 [Mycobacterium tuberculosis CDC1551]
 gi|289545885|gb|EFD49532.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289711568|gb|EFD75584.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=112

 Score =  192 bits (489),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1    MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
            MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ
Sbjct  15   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  74

Query  61   LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  98
            LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA
Sbjct  75   LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  112


>gi|31795046|ref|NP_857539.1| PE family-like protein [Mycobacterium bovis AF2122/97]
 gi|148825080|ref|YP_001289834.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|253800922|ref|YP_003033924.1| hypothetical protein TBMG_03920 [Mycobacterium tuberculosis KZN 
1435]
 47 more sequence titles
 Length=98

 Score =  192 bits (489),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ
Sbjct  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  98
           LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA
Sbjct  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  98


>gi|340628844|ref|YP_004747296.1| PE family-like protein [Mycobacterium canettii CIPT 140010059]
 gi|340007034|emb|CCC46225.1| PE family-related protein [Mycobacterium canettii CIPT 140010059]
Length=98

 Score =  190 bits (483),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 96/98 (98%), Positives = 97/98 (99%), Gaps = 0/98 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ
Sbjct  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  98
           LLASN SAQDQLHRAGEAVQDVARTYSQ+DDGAAGVFA
Sbjct  61  LLASNVSAQDQLHRAGEAVQDVARTYSQVDDGAAGVFA  98


>gi|308406276|ref|ZP_07495784.2| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|308363936|gb|EFP52787.1| PE family protein [Mycobacterium tuberculosis SUMu012]
Length=96

 Score =  187 bits (475),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)

Query  4   MSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLA  63
           MSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLA
Sbjct  1   MSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLA  60

Query  64  SNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  99
           SNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE
Sbjct  61  SNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  96


>gi|289445474|ref|ZP_06435218.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|298527345|ref|ZP_07014754.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289418432|gb|EFD15633.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|298497139|gb|EFI32433.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
Length=95

 Score =  185 bits (469),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)

Query  4   MSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLA  63
           MSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLA
Sbjct  1   MSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLA  60

Query  64  SNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  98
           SNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA
Sbjct  61  SNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  95


>gi|323717455|gb|EGB26659.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=82

 Score =  157 bits (396),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 81/82 (99%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  17  VSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAG  76
           +SDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAG
Sbjct  1   MSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAG  60

Query  77  EAVQDVARTYSQIDDGAAGVFA  98
           EAVQDVARTYSQIDDGAAGVFA
Sbjct  61  EAVQDVARTYSQIDDGAAGVFA  82


>gi|240168351|ref|ZP_04747010.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=98

 Score =  125 bits (313),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 76/98 (78%), Positives = 85/98 (87%), Gaps = 0/98 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           ME+MSH   AADIG QVSDNAL GV AG+TA+TSVTGLVPAGADEVSAQAA AF S G Q
Sbjct  1   MEEMSHAAAAADIGGQVSDNALGGVAAGATAVTSVTGLVPAGADEVSAQAAAAFASAGAQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFA  98
           +LASN+SAQ +L RAG+AVQD+ARTYSQ+DDGAAGV A
Sbjct  61  MLASNSSAQAELQRAGDAVQDIARTYSQVDDGAAGVVA  98


>gi|240170200|ref|ZP_04748859.1| PE family protein, PE34 [Mycobacterium kansasii ATCC 12478]
Length=111

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 50/94 (54%), Positives = 70/94 (75%), Gaps = 0/94 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ MS DP+ ADIG+QV+D     + AG+TA++SVTGL PAGADEVSAQA TAF ++   
Sbjct  1   MQPMSFDPVVADIGSQVADLGTRSLQAGATAVSSVTGLAPAGADEVSAQAVTAFHTQAAS  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAA  94
           +LA N +AQ++L R G A + VA++Y+ +D+ AA
Sbjct  61  MLALNQAAQEELVRTGAAFRQVAQSYTDVDEAAA  94


>gi|240168503|ref|ZP_04747162.1| PE family protein, PE34 [Mycobacterium kansasii ATCC 12478]
Length=111

 Score = 99.8 bits (247),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 58/94 (62%), Positives = 71/94 (76%), Gaps = 0/94 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ MS DP AADIG QV+DNA  G+ AG+TA T +T L+PAGADEVSAQA  AFT+E  Q
Sbjct  1   MQSMSIDPAAADIGAQVADNASQGLQAGATASTPLTSLLPAGADEVSAQAVAAFTAEAAQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAA  94
           LLA N +AQ++L RAGEA  D+AR Y+ +D  AA
Sbjct  61  LLALNQAAQEELRRAGEAFADIARMYTDVDTTAA  94


>gi|118619500|ref|YP_907832.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183985254|ref|YP_001853545.1| PE family protein, PE34 [Mycobacterium marinum M]
 gi|118571610|gb|ABL06361.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183178580|gb|ACC43690.1| PE family protein, PE34 [Mycobacterium marinum M]
Length=111

 Score = 99.8 bits (247),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 50/90 (56%), Positives = 65/90 (73%), Gaps = 0/90 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ MS DP+AADIG Q+++ A  G+ AG+TA TS+T + PAGADEVS QA  AFT    Q
Sbjct  1   MQSMSIDPVAADIGAQLAEGAFRGLQAGATAATSITSVRPAGADEVSTQAMLAFTKHAGQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQID  90
           +LA N +AQ++L RAGEAV  +AR Y+  D
Sbjct  61  MLALNQAAQEELRRAGEAVNAIARMYADTD  90


>gi|289443461|ref|ZP_06433205.1| PE family protein [Mycobacterium tuberculosis T46]
 gi|289416380|gb|EFD13620.1| PE family protein [Mycobacterium tuberculosis T46]
Length=215

 Score = 97.1 bits (240),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (70%), Gaps = 1/98 (1%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTA-LTSVTGLVPAGADEVSAQAATAFTSEGI  59
           M+ +SHDP A DIG+Q+ +    G+ AG+ A + ++TGLVPAG +EVSAQA  AF +E  
Sbjct  1   MDSLSHDPAAGDIGSQLVEIGSRGLAAGNAATMPTMTGLVPAGGEEVSAQAVMAFATEAA  60

Query  60  QLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
            ++ASN +AQ++L RAG A+ D+AR Y   DD AAG  
Sbjct  61  SMIASNTAAQEELMRAGTALTDIARMYGDTDDNAAGAL  98


>gi|289447594|ref|ZP_06437338.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|340626986|ref|YP_004745438.1| pe family protein [Mycobacterium canettii CIPT 140010059]
 gi|289420552|gb|EFD17753.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|340005176|emb|CCC44325.1| pe family protein [Mycobacterium canettii CIPT 140010059]
Length=215

 Score = 97.1 bits (240),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (70%), Gaps = 1/98 (1%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTA-LTSVTGLVPAGADEVSAQAATAFTSEGI  59
           M+ +SHDP A DIG+Q+ +    G+ AG+ A + ++TGLVPAG +EVSAQA  AF +E  
Sbjct  1   MDSLSHDPAAGDIGSQLVEIGSRGLAAGNAATMPTMTGLVPAGGEEVSAQAVMAFATEAA  60

Query  60  QLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
            ++ASN +AQ++L RAG A+ D+AR Y   DD AAG  
Sbjct  61  SMIASNTAAQEELMRAGTALTDIARMYGDTDDNAAGAL  98


>gi|289750551|ref|ZP_06509929.1| predicted protein [Mycobacterium tuberculosis T92]
 gi|289691138|gb|EFD58567.1| predicted protein [Mycobacterium tuberculosis T92]
Length=255

 Score = 97.1 bits (240),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (70%), Gaps = 1/98 (1%)

Query  1    MEKMSHDPIAADIGTQVSDNALHGVTAGSTA-LTSVTGLVPAGADEVSAQAATAFTSEGI  59
            M+ +SHDP A DIG+Q+ +    G+ AG+ A + ++TGLVPAG +EVSAQA  AF +E  
Sbjct  41   MDSLSHDPAAGDIGSQLVEIGSRGLAAGNAATMPTMTGLVPAGGEEVSAQAVMAFATEAA  100

Query  60   QLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
             ++ASN +AQ++L RAG A+ D+AR Y   DD AAG  
Sbjct  101  SMIASNTAAQEELMRAGTALTDIARMYGDTDDNAAGAL  138


>gi|289754074|ref|ZP_06513452.1| predicted protein [Mycobacterium tuberculosis EAS054]
 gi|289694661|gb|EFD62090.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length=255

 Score = 97.1 bits (240),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (70%), Gaps = 1/98 (1%)

Query  1    MEKMSHDPIAADIGTQVSDNALHGVTAGSTA-LTSVTGLVPAGADEVSAQAATAFTSEGI  59
            M+ +SHDP A DIG+Q+ +    G+ AG+ A + ++TGLVPAG +EVSAQA  AF +E  
Sbjct  41   MDSLSHDPAAGDIGSQLVEIGSRGLAAGNAATMPTMTGLVPAGGEEVSAQAVMAFATEAA  100

Query  60   QLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
             ++ASN +AQ++L RAG A+ D+AR Y   DD AAG  
Sbjct  101  SMIASNTAAQEELMRAGTALTDIARMYGDTDDNAAGAL  138


>gi|183982898|ref|YP_001851189.1| PE family protein [Mycobacterium marinum M]
 gi|183176224|gb|ACC41334.1| PE family protein [Mycobacterium marinum M]
Length=230

 Score = 96.7 bits (239),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 48/87 (56%), Positives = 64/87 (74%), Gaps = 1/87 (1%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTA-LTSVTGLVPAGADEVSAQAATAFTSEGI  59
           M+ MSHDP A DIG+Q+ D    G++AG+TA +T +TGL+PAGA+EVSAQA  AF  E  
Sbjct  1   MDPMSHDPAAGDIGSQLVDIGTQGISAGTTAAMTVLTGLIPAGAEEVSAQAVLAFAQEAA  60

Query  60  QLLASNASAQDQLHRAGEAVQDVARTY  86
            +LASN +AQ++L R G A+ D+AR Y
Sbjct  61  TMLASNVAAQEELMRTGTALSDIARMY  87


>gi|289746084|ref|ZP_06505462.1| PE family protein [Mycobacterium tuberculosis 02_1987]
 gi|294996901|ref|ZP_06802592.1| PE family protein [Mycobacterium tuberculosis 210]
 gi|289686612|gb|EFD54100.1| PE family protein [Mycobacterium tuberculosis 02_1987]
 gi|326903584|gb|EGE50517.1| hypothetical protein TBPG_01460 [Mycobacterium tuberculosis W-148]
 gi|339294902|gb|AEJ47013.1| PE family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298525|gb|AEJ50635.1| PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=163

 Score = 96.7 bits (239),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (70%), Gaps = 1/98 (1%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTA-LTSVTGLVPAGADEVSAQAATAFTSEGI  59
           M+ +SHDP A DIG+Q+ +    G+ AG+ A + ++TGLVPAG +EVSAQA  AF +E  
Sbjct  1   MDSLSHDPAAGDIGSQLVEIGSRGLAAGNAATMPTMTGLVPAGGEEVSAQAVMAFATEAA  60

Query  60  QLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
            ++ASN +AQ++L RAG A+ D+AR Y   DD AAG  
Sbjct  61  SMIASNTAAQEELMRAGTALTDIARMYGDTDDNAAGAL  98


>gi|240170199|ref|ZP_04748858.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=214

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/87 (56%), Positives = 64/87 (74%), Gaps = 1/87 (1%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTA-LTSVTGLVPAGADEVSAQAATAFTSEGI  59
           M+ MSHDP A DIG+Q+ D    G++AGSTA +T +TGL+PAGA+EVSAQA  AF  E  
Sbjct  1   MDTMSHDPSAGDIGSQLVDIGSQGISAGSTAAMTVLTGLIPAGAEEVSAQAVMAFAQEAA  60

Query  60  QLLASNASAQDQLHRAGEAVQDVARTY  86
            +LASN +AQ++L R G A+ ++AR Y
Sbjct  61  SMLASNVAAQEELMRTGSALTNIARMY  87


>gi|289763927|ref|ZP_06523305.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289711433|gb|EFD75449.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=111

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 49/99 (50%), Positives = 64/99 (65%), Gaps = 0/99 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ MS DP  ADIG+QV +NA  G+ AG+ A  S++ L+PAGA+EVSA A  AFT+    
Sbjct  1   MQSMSFDPAVADIGSQVVNNAFQGLQAGAVAWVSLSSLLPAGAEEVSAWAVMAFTTAATG  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  99
           LLA N +AQ++L +AGE    +AR YS  D  AA    E
Sbjct  61  LLALNQAAQEELRKAGEVFTAIARMYSDADVRAAACLLE  99


>gi|118467647|ref|YP_884481.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
 gi|118168934|gb|ABK69830.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
Length=97

 Score = 91.7 bits (226),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 47/90 (53%), Positives = 63/90 (70%), Gaps = 0/90 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ M+H+P A  +  QV  NA  G+  G+TA  +VT LVPAGADEVSA AA AF SEG++
Sbjct  1   MQPMTHNPGAEAVAAQVIANAARGLAGGTTASAAVTALVPAGADEVSALAAVAFASEGVE  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQID  90
            LA+NA AQ++L RAG A  ++A  Y+ +D
Sbjct  61  ALAANAFAQEELTRAGAAFAEIAGIYNAVD  90


>gi|183985418|ref|YP_001853709.1| PE family protein [Mycobacterium marinum M]
 gi|183178744|gb|ACC43854.1| PE family protein [Mycobacterium marinum M]
Length=98

 Score = 88.2 bits (217),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 56/97 (58%), Positives = 72/97 (75%), Gaps = 0/97 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           ME+ SH    ADIGT +S NA  GVT+ + AL SVTG+VPAGADEVS QAATAF +EG Q
Sbjct  1   MEQKSHGAAIADIGTLLSGNARIGVTSDAAALASVTGVVPAGADEVSTQAATAFAAEGAQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
           LLAS+++AQ ++HRAGE+   +A   +++ DGAA V 
Sbjct  61  LLASSSAAQREIHRAGESPHRIAPNPAEVSDGAASVI  97


>gi|31794916|ref|NP_857409.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57117152|ref|YP_178011.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121639660|ref|YP_979884.1| putative PE family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 65 more sequence titles
 Length=111

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 50/99 (51%), Positives = 65/99 (66%), Gaps = 0/99 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ MS DP  ADIG+QV +NA  G+ AG+ A  S++ L+PAGA+EVSA A TAFT+    
Sbjct  1   MQSMSFDPAVADIGSQVVNNAFQGLQAGAVAWVSLSSLLPAGAEEVSAWAVTAFTTAATG  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  99
           LLA N +AQ++L +AGE    +AR YS  D  AA    E
Sbjct  61  LLALNQAAQEELRKAGEVFTAIARMYSDADVRAAACLLE  99


>gi|15843367|ref|NP_338404.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|13883731|gb|AAK48218.1| PE family protein [Mycobacterium tuberculosis CDC1551]
Length=123

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/99 (51%), Positives = 65/99 (66%), Gaps = 0/99 (0%)

Query  1    MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
            M+ MS DP  ADIG+QV +NA  G+ AG+ A  S++ L+PAGA+EVSA A TAFT+    
Sbjct  13   MQSMSFDPAVADIGSQVVNNAFQGLQAGAVAWVSLSSLLPAGAEEVSAWAVTAFTTAATG  72

Query  61   LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  99
            LLA N +AQ++L +AGE    +AR YS  D  AA    E
Sbjct  73   LLALNQAAQEELRKAGEVFTAIARMYSDADVRAAACLLE  111


>gi|308372643|ref|ZP_07429349.2| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308373806|ref|ZP_07433713.2| PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308376214|ref|ZP_07438050.2| PE family protein [Mycobacterium tuberculosis SUMu008]
 9 more sequence titles
 Length=108

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 49/96 (52%), Positives = 63/96 (66%), Gaps = 0/96 (0%)

Query  4   MSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQLLA  63
           MS DP  ADIG+QV +NA  G+ AG+ A  S++ L+PAGA+EVSA A TAFT+    LLA
Sbjct  1   MSFDPAVADIGSQVVNNAFQGLQAGAVAWVSLSSLLPAGAEEVSAWAVTAFTTAATGLLA  60

Query  64  SNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVFAE  99
            N +AQ++L +AGE    +AR YS  D  AA    E
Sbjct  61  LNQAAQEELRKAGEVFTAIARMYSDADVRAAACLLE  96


>gi|145221364|ref|YP_001132042.1| PE-like protein [Mycobacterium gilvum PYR-GCK]
 gi|315441752|ref|YP_004074631.1| hypothetical protein Mspyr1_00620 [Mycobacterium sp. Spyr1]
 gi|145213850|gb|ABP43254.1| PE-like protein [Mycobacterium gilvum PYR-GCK]
 gi|315260055|gb|ADT96796.1| hypothetical protein Mspyr1_00620 [Mycobacterium sp. Spyr1]
Length=98

 Score = 77.8 bits (190),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 41/90 (46%), Positives = 55/90 (62%), Gaps = 0/90 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ ++H+P AA IG QV+ N   G+  G+ A   V+ L PAG DE+SA AA +F SEGIQ
Sbjct  1   MQPLNHNPAAAGIGGQVTANGARGLGVGTAATAEVSALAPAGVDEISAVAALSFASEGIQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQID  90
            L  NA AQ ++ RAG  V + +  Y   D
Sbjct  61  TLGINAMAQQEIARAGATVIEASVAYEATD  90


>gi|296164967|ref|ZP_06847522.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899615|gb|EFG79066.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=237

 Score = 75.1 bits (183),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 48/97 (50%), Positives = 64/97 (66%), Gaps = 0/97 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           ME M+HDP A  IG QV + A  G+ +G+ A  +VT L PAGADEVS QA  AF +EG  
Sbjct  1   MEPMTHDPAAGAIGLQVVEIATQGLASGAAASVAVTALAPAGADEVSIQAVAAFAAEGAA  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
           +LA N +AQ+++ R G A+ D+AR Y+Q+D   AG  
Sbjct  61  MLALNTAAQEEMARTGVALTDIARMYAQVDGETAGTL  97


>gi|120401104|ref|YP_950933.1| PE-like protein [Mycobacterium vanbaalenii PYR-1]
 gi|119953922|gb|ABM10927.1| PE-like protein [Mycobacterium vanbaalenii PYR-1]
Length=98

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 41/90 (46%), Positives = 59/90 (66%), Gaps = 0/90 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ +SH+P A  +G QV+ N   G+  G+ A ++V+ L PAGADEVSA AA  F +EGIQ
Sbjct  1   MQPLSHNPGAIGVGGQVTANGARGLATGTAATSAVSALAPAGADEVSAAAAVTFAAEGIQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQID  90
            L  NA AQ+++ RAG ++ + A  Y  +D
Sbjct  61  TLGINALAQEEIARAGASIIEAAGAYQAVD  90


>gi|183980219|ref|YP_001848510.1| PE family protein, PE35 [Mycobacterium marinum M]
 gi|183173545|gb|ACC38655.1| PE family protein, PE35 [Mycobacterium marinum M]
Length=98

 Score = 67.4 bits (163),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 48/91 (53%), Positives = 65/91 (72%), Gaps = 0/91 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M  MS DP AA +   +S +A  G+ AG+ A +SVTGL PAGADE+SAQ A AF +EG Q
Sbjct  1   MRSMSFDPAAASVAAAISAHASRGLDAGTAAASSVTGLAPAGADEISAQFAAAFAAEGAQ  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDD  91
           +LA N +AQD+L RAG+A++ +A  YS +D+
Sbjct  61  VLALNTAAQDELARAGQALRQIAGMYSAVDN  91


>gi|108797049|ref|YP_637246.1| PE-like protein [Mycobacterium sp. MCS]
 gi|119866134|ref|YP_936086.1| PE domain-containing protein [Mycobacterium sp. KMS]
 gi|126432671|ref|YP_001068362.1| PE domain-containing protein [Mycobacterium sp. JLS]
 gi|108767468|gb|ABG06190.1| PE-like protein [Mycobacterium sp. MCS]
 gi|119692223|gb|ABL89296.1| PE domain protein [Mycobacterium sp. KMS]
 gi|126232471|gb|ABN95871.1| PE domain protein [Mycobacterium sp. JLS]
Length=97

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 45/97 (47%), Positives = 60/97 (62%), Gaps = 0/97 (0%)

Query  1   MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQAATAFTSEGIQ  60
           M+ + H+P AA IG QV  N   G+  G+ A  +VT LVPAGADEVSA AA  F +EG +
Sbjct  1   MQPLEHNPGAAGIGGQVVANGARGLAGGTAATAAVTALVPAGADEVSAMAAATFAAEGAE  60

Query  61  LLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
            LA N  AQ++L RAG A  +++  Y+ +D   A  F
Sbjct  61  TLALNTFAQEELSRAGAAFTEISGIYAAVDAANASTF  97


>gi|145226055|ref|YP_001136709.1| PE domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|145218518|gb|ABP47921.1| PE domain protein [Mycobacterium gilvum PYR-GCK]
Length=97

 Score = 42.4 bits (98),  Expect = 0.026, Method: Compositional matrix adjust.
 Identities = 23/52 (45%), Positives = 30/52 (58%), Gaps = 0/52 (0%)

Query  35  VTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTY  86
           V+ LVP+G DEVS  AA AF ++GI+  A +A     L  AGE +  V   Y
Sbjct  34  VSALVPSGVDEVSVMAAAAFGAQGIEFSAMSAEGAAMLTLAGEGLTAVGAAY  85


>gi|118617769|ref|YP_906101.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183983006|ref|YP_001851297.1| PE family protein [Mycobacterium marinum M]
 gi|118569879|gb|ABL04630.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183176332|gb|ACC41442.1| PE family protein [Mycobacterium marinum M]
Length=101

 Score = 37.4 bits (85),  Expect = 0.80, Method: Compositional matrix adjust.
 Identities = 22/66 (34%), Positives = 37/66 (57%), Gaps = 3/66 (4%)

Query  35  VTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAA  94
           +T +VP  AD VS +AA  F++ G++ +A      ++L R+G  V +   +Y+  D  AA
Sbjct  35  ITAVVPPAADPVSLEAAIGFSAHGVEHVAVTTEGIEELGRSGVGVGESGLSYASGDAAAA  94

Query  95  ---GVF  97
              G+F
Sbjct  95  LTYGLF  100


>gi|317506395|ref|ZP_07964203.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
 gi|316255311|gb|EFV14573.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
Length=102

 Score = 37.4 bits (85),  Expect = 0.82, Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 0/60 (0%)

Query  38  LVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
           +VP  AD VS QAA  F++ G    A  A A ++L R+G  V + A +Y+  D   A VF
Sbjct  38  VVPPAADPVSLQAAAGFSARGSSHTAVAAEAVEELGRSGLGVAETAESYAVGDLQGAAVF  97


>gi|320161456|ref|YP_004174680.1| thiol-disulfide oxidoreductase [Anaerolinea thermophila UNI-1]
 gi|319995309|dbj|BAJ64080.1| thiol-disulfide oxidoreductase [Anaerolinea thermophila UNI-1]
Length=200

 Score = 36.2 bits (82),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 27/95 (29%), Positives = 44/95 (47%), Gaps = 12/95 (12%)

Query  14   GTQVSDNALHGVTAGSTALTSVTGLV----------PAGADEVSA--QAATAFTSEGIQL  61
            G    D  L  +  G+  L+ + G V          P   +E+ A  +   A+ S+G+++
Sbjct  58   GFLAPDFELRSIDGGTIRLSDLRGKVVILNFWASWCPPCREEMPALQRVYQAYQSQGVEV  117

Query  62   LASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGV  96
            +A NA++QD L      VQD   T+S + D   GV
Sbjct  118  IAVNATSQDTLSDVLNFVQDNGLTFSVLLDEQGGV  152


>gi|169627151|ref|YP_001700800.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169629317|ref|YP_001702966.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169239118|emb|CAM60146.1| Probable PE family protein [Mycobacterium abscessus]
 gi|169241284|emb|CAM62312.1| Hypothetical PE family protein [Mycobacterium abscessus]
Length=102

 Score = 35.4 bits (80),  Expect = 2.9, Method: Compositional matrix adjust.
 Identities = 22/60 (37%), Positives = 33/60 (55%), Gaps = 0/60 (0%)

Query  38  LVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAGVF  97
           +VP  AD VS + A  F++ GI+     A A ++L RAG  V + A +Y+  D  AA  +
Sbjct  38  VVPPAADPVSLETAAGFSARGIEHSGVAAQAVEELGRAGLGVSESAASYTTGDMQAAAAY  97


>gi|15839671|ref|NP_334708.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31791464|ref|NP_853957.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116715|ref|YP_177710.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 81 more sequence titles
 Length=102

 Score = 35.4 bits (80),  Expect = 2.9, Method: Compositional matrix adjust.
 Identities = 18/52 (35%), Positives = 29/52 (56%), Gaps = 0/52 (0%)

Query  35  VTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTY  86
           +T +VP  AD VS Q A  F+++G++     A   ++L RAG  V +   +Y
Sbjct  35  ITAVVPPAADPVSLQTAAGFSAQGVEHAVVTAEGVEELGRAGVGVGESGASY  86


>gi|118616921|ref|YP_905253.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183980572|ref|YP_001848863.1| PE family protein, PE5 [Mycobacterium marinum M]
 gi|118569031|gb|ABL03782.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183173898|gb|ACC39008.1| PE family protein, PE5 [Mycobacterium marinum M]
Length=102

 Score = 35.0 bits (79),  Expect = 3.6, Method: Compositional matrix adjust.
 Identities = 19/52 (37%), Positives = 30/52 (58%), Gaps = 0/52 (0%)

Query  35  VTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTY  86
           ++ +VPA  D VS Q A  F+++GI+  A  A   ++L RAG  V +   +Y
Sbjct  35  ISAVVPAAVDPVSLQTAAGFSAQGIEHAAVAAEGVEELGRAGLGVGESGVSY  86


>gi|240168499|ref|ZP_04747158.1| PE family protein, PE5 [Mycobacterium kansasii ATCC 12478]
Length=104

 Score = 34.7 bits (78),  Expect = 4.5, Method: Compositional matrix adjust.
 Identities = 18/53 (34%), Positives = 30/53 (57%), Gaps = 0/53 (0%)

Query  35  VTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTYS  87
           +T +VP  AD VS Q A  F+ +G++  A  A   ++L R+G  V +   +Y+
Sbjct  35  ITAVVPPAADPVSLQTAAGFSGQGVEHAAIVAEGVEELGRSGVGVGEAGVSYA  87


>gi|118616216|ref|YP_904548.1| PE-PGRS family protein family protein [Mycobacterium ulcerans 
Agy99]
 gi|118568326|gb|ABL03077.1| PE-PGRS family protein family protein [Mycobacterium ulcerans 
Agy99]
Length=99

 Score = 34.3 bits (77),  Expect = 5.6, Method: Compositional matrix adjust.
 Identities = 25/74 (34%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query  22  LHGVTAGSTA-----LTSVTGLVPAGADEVSAQAATAFTSEGIQLLASNASAQDQLHRAG  76
           LH V AG++A     +  +TG+VPA ADEVSA  A  F + G      +A AQ       
Sbjct  18  LHSVGAGTSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGAMCQTLSAQAQAIYEMFV  77

Query  77  EAVQDVARTYSQID  90
             +Q    +Y++ +
Sbjct  78  TTLQACGGSYAETE  91


>gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178080|gb|ACC43190.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=99

 Score = 33.9 bits (76),  Expect = 8.8, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 33/58 (57%), Gaps = 7/58 (12%)

Query  22  LHGVTAG-----STALTSVTGLVPAGADEVSAQAATAFTSEG--IQLLASNASAQDQL  72
           LH V AG     + A+  +TG+VPA ADEVSA  A  F + G   Q L++ A A  ++
Sbjct  18  LHSVGAGMSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGAMYQTLSAQAQAIHEM  75



Lambda     K      H
   0.309    0.121    0.321 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 129711308684


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40