BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3877 Length=511 Score E Sequences producing significant alignments: (Bits) Value gi|15611013|ref|NP_218394.1| transmembrane protein [Mycobacteriu... 997 0.0 gi|340628849|ref|YP_004747301.1| hypothetical protein MCAN_38991... 996 0.0 gi|289748110|ref|ZP_06507488.1| transmembrane protein [Mycobacte... 993 0.0 gi|289441319|ref|ZP_06431063.1| conserved membrane protein [Myco... 991 0.0 gi|308232599|ref|ZP_07416579.2| conserved membrane protein [Myco... 955 0.0 gi|15843508|ref|NP_338545.1| hypothetical protein MT3991 [Mycoba... 941 0.0 gi|254548882|ref|ZP_05139329.1| hypothetical protein Mtube_00185... 939 0.0 gi|289747720|ref|ZP_06507098.1| transmembrane protein [Mycobacte... 899 0.0 gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_0353... 780 0.0 gi|183985423|ref|YP_001853714.1| hypothetical protein MMAR_5452 ... 734 0.0 gi|15826897|ref|NP_301160.1| hypothetical protein ML0047 [Mycoba... 721 0.0 gi|2370277|emb|CAA75198.1| hypothetical protein [Mycobacterium l... 678 0.0 gi|120401109|ref|YP_950938.1| hypothetical protein Mvan_0081 [My... 671 0.0 gi|118473897|ref|YP_884486.1| transmembrane protein [Mycobacteri... 658 0.0 gi|126432676|ref|YP_001068367.1| hypothetical protein Mjls_0063 ... 645 0.0 gi|108797054|ref|YP_637251.1| hypothetical protein Mmcs_0073 [My... 644 0.0 gi|119866139|ref|YP_936091.1| hypothetical protein Mkms_0082 [My... 630 2e-178 gi|315441757|ref|YP_004074636.1| secretion protein snm4 [Mycobac... 597 2e-168 gi|289572135|ref|ZP_06452362.1| conserved membrane protein [Myco... 587 2e-165 gi|145221359|ref|YP_001132037.1| hypothetical protein Mflv_0764 ... 583 3e-164 gi|289760046|ref|ZP_06519424.1| LOW QUALITY PROTEIN: transmembra... 511 1e-142 gi|289748411|ref|ZP_06507789.1| conserved membrane protein [Myco... 462 5e-128 gi|289760045|ref|ZP_06519423.1| transmembrane protein [Mycobacte... 394 2e-107 gi|296393782|ref|YP_003658666.1| secretion protein snm4 [Segnili... 139 2e-30 gi|296138071|ref|YP_003645314.1| secretion protein snm4 [Tsukamu... 130 4e-28 gi|262201637|ref|YP_003272845.1| secretion protein snm4 [Gordoni... 120 8e-25 gi|317506955|ref|ZP_07964724.1| secretion protein snm4 [Segnilip... 118 3e-24 gi|343925122|ref|ZP_08764654.1| hypothetical protein GOALK_033_0... 105 1e-20 gi|145226050|ref|YP_001136704.1| Fis family transcriptional regu... 105 2e-20 gi|169630836|ref|YP_001704485.1| hypothetical protein MAB_3757 [... 101 4e-19 gi|54022794|ref|YP_117036.1| hypothetical protein nfa8270 [Nocar... 94.4 4e-17 gi|54022817|ref|YP_117059.1| hypothetical protein nfa8500 [Nocar... 91.3 4e-16 gi|226365631|ref|YP_002783414.1| hypothetical protein ROP_62220 ... 85.5 2e-14 gi|118616926|ref|YP_905258.1| transmembrane protein [Mycobacteri... 82.4 2e-13 gi|183980577|ref|YP_001848868.1| transmembrane protein [Mycobact... 72.4 2e-10 gi|118471932|ref|YP_885034.1| secretion protein Snm4 [Mycobacter... 72.4 2e-10 gi|289574472|ref|ZP_06454699.1| conserved membrane protein [Myco... 67.0 8e-09 gi|240172732|ref|ZP_04751391.1| transmembrane protein [Mycobacte... 66.6 1e-08 gi|296164030|ref|ZP_06846653.1| conserved hypothetical protein [... 65.9 2e-08 gi|226305379|ref|YP_002765337.1| hypothetical protein RER_18900 ... 64.7 3e-08 gi|302524033|ref|ZP_07276375.1| predicted protein [Streptomyces ... 64.3 4e-08 gi|118465427|ref|YP_883986.1| hypothetical protein MAV_4863 [Myc... 63.5 9e-08 gi|119855165|ref|YP_935770.1| hypothetical protein Mkms_5780 [My... 63.2 1e-07 gi|229489514|ref|ZP_04383377.1| secretion protein Snm4 [Rhodococ... 62.0 2e-07 gi|296138595|ref|YP_003645838.1| secretion protein snm4 [Tsukamu... 60.5 6e-07 gi|296165447|ref|ZP_06847983.1| conserved hypothetical protein [... 60.1 9e-07 gi|325675482|ref|ZP_08155166.1| hypothetical protein HMPREF0724_... 60.1 9e-07 gi|41409884|ref|NP_962720.1| hypothetical protein MAP3786 [Mycob... 60.1 1e-06 gi|312140880|ref|YP_004008216.1| esx cluster integral membrane p... 59.7 1e-06 gi|308369358|ref|ZP_07417469.2| conserved membrane protein [Myco... 59.3 1e-06 >gi|15611013|ref|NP_218394.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|31795051|ref|NP_857544.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|148663744|ref|YP_001285267.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] 30 more sequence titles Length=511 Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/511 (99%), Positives = 511/511 (100%), Gaps = 0/511 (0%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +SAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE Sbjct 1 MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV Sbjct 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 Query 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL Sbjct 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 Query 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA Sbjct 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 Query 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA Sbjct 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 Query 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER Sbjct 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 Query 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA Sbjct 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 Query 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT Sbjct 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 Query 481 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF Sbjct 481 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 >gi|340628849|ref|YP_004747301.1| hypothetical protein MCAN_38991 [Mycobacterium canettii CIPT 140010059] gi|340007039|emb|CCC46230.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=511 Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/511 (99%), Positives = 511/511 (100%), Gaps = 0/511 (0%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +SAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE Sbjct 1 MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 DTPADVLGGFDFTAQG+WAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV Sbjct 61 DTPADVLGGFDFTAQGLWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 Query 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL Sbjct 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 Query 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA Sbjct 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 Query 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA Sbjct 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 Query 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER Sbjct 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 Query 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA Sbjct 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 Query 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT Sbjct 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 Query 481 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF Sbjct 481 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 >gi|289748110|ref|ZP_06507488.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289688638|gb|EFD56126.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] Length=511 Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/511 (99%), Positives = 510/511 (99%), Gaps = 0/511 (0%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +SAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE Sbjct 1 MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV Sbjct 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 Query 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL Sbjct 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 Query 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA Sbjct 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 Query 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA Sbjct 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 Query 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER Sbjct 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 Query 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA Sbjct 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 Query 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT Sbjct 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 Query 481 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 LELIDGAMIAAIIPMLLWITGVY+ VRNIRF Sbjct 481 LELIDGAMIAAIIPMLLWITGVYEKVRNIRF 511 >gi|289441319|ref|ZP_06431063.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289414238|gb|EFD11478.1| conserved membrane protein [Mycobacterium tuberculosis T46] Length=511 Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/511 (99%), Positives = 510/511 (99%), Gaps = 0/511 (0%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +SAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE Sbjct 1 MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV Sbjct 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 Query 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL Sbjct 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 Query 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 GIAVLVGSFVANRFYQSGHLAE LLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA Sbjct 181 GIAVLVGSFVANRFYQSGHLAEYLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 Query 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA Sbjct 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 Query 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 KLTV+VARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER Sbjct 301 KLTVSVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 Query 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA Sbjct 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCA 420 Query 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT Sbjct 421 WALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 Query 481 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF Sbjct 481 LELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 >gi|308232599|ref|ZP_07416579.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308369264|ref|ZP_07417108.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308371534|ref|ZP_07425249.2| secretion protein Snm4 [Mycobacterium tuberculosis SUMu004] 17 more sequence titles Length=487 Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 25 VTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPG 84 +TILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPG Sbjct 1 MTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPG 60 Query 85 SPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRF 144 SPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRF Sbjct 61 SPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRF 120 Query 145 VGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECL 204 VGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECL Sbjct 121 VGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECL 180 Query 205 LVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVI 264 LVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVI Sbjct 181 LVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVI 240 Query 265 TAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNE 324 TAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNE Sbjct 241 TAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNE 300 Query 325 ELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI 384 ELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI Sbjct 301 ELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI 360 Query 385 AVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPH 444 AVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPH Sbjct 361 AVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPH 420 Query 445 YAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYD 504 YAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYD Sbjct 421 YAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYD 480 Query 505 TVRNIRF 511 TVRNIRF Sbjct 481 TVRNIRF 487 >gi|15843508|ref|NP_338545.1| hypothetical protein MT3991 [Mycobacterium tuberculosis CDC1551] gi|148825085|ref|YP_001289839.1| transmembrane protein [Mycobacterium tuberculosis F11] gi|254233365|ref|ZP_04926691.1| hypothetical protein TBCG_03804 [Mycobacterium tuberculosis C] 9 more sequence titles Length=479 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/479 (100%), Positives = 479/479 (100%), Gaps = 0/479 (0%) Query 33 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 92 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ Sbjct 1 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 60 Query 93 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 152 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL Sbjct 61 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 120 Query 153 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 212 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI Sbjct 121 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 180 Query 213 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA 272 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA Sbjct 181 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA 240 Query 273 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT 332 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT Sbjct 241 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT 300 Query 333 PEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHF 392 PEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHF Sbjct 301 PEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHF 360 Query 393 FVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSV 452 FVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSV Sbjct 361 FVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSV 420 Query 453 YLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 YLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF Sbjct 421 YLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 479 >gi|254548882|ref|ZP_05139329.1| hypothetical protein Mtube_00185 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=479 Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/479 (99%), Positives = 478/479 (99%), Gaps = 0/479 (0%) Query 33 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 92 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ Sbjct 1 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 60 Query 93 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 152 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL Sbjct 61 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 120 Query 153 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 212 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI Sbjct 121 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 180 Query 213 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA 272 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA Sbjct 181 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA 240 Query 273 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT 332 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT Sbjct 241 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT 300 Query 333 PEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHF 392 PEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHF Sbjct 301 PEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHF 360 Query 393 FVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSV 452 FVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSV Sbjct 361 FVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSV 420 Query 453 YLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 YLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIR Sbjct 421 YLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRL 479 >gi|289747720|ref|ZP_06507098.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289688248|gb|EFD55736.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] Length=458 Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/458 (99%), Positives = 458/458 (100%), Gaps = 0/458 (0%) Query 54 VLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRT 113 +LSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRT Sbjct 1 MLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRT 60 Query 114 ERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWW 173 ERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWW Sbjct 61 ERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWW 120 Query 174 PLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQ 233 PLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQ Sbjct 121 PLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQ 180 Query 234 VAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGL 293 VAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGL Sbjct 181 VAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGL 240 Query 294 FIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPAS 353 FIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPAS Sbjct 241 FIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPAS 300 Query 354 AVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRL 413 AVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRL Sbjct 301 AVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRL 360 Query 414 YAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRV 473 YAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRV Sbjct 361 YAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRV 420 Query 474 SPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 SPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF Sbjct 421 SPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 458 >gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_03532 [Mycobacterium kansasii ATCC 12478] Length=511 Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/493 (81%), Positives = 444/493 (91%), Gaps = 0/493 (0%) Query 19 RPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVW 78 +PATTRVTILTG+RMTDLVLPAA PMETYIDDTVAVL+++LEDTP DVL GFDF+AQGVW Sbjct 19 KPATTRVTILTGKRMTDLVLPAAAPMETYIDDTVAVLADLLEDTPPDVLAGFDFSAQGVW 78 Query 79 AFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDR 138 AFARPG PPL+LDQSLD+AGVVDGSLLTLV+VSRTERYRPLVEDVIDAIAVLDESPEFDR Sbjct 79 AFARPGFPPLRLDQSLDEAGVVDGSLLTLVTVSRTERYRPLVEDVIDAIAVLDESPEFDR 138 Query 139 TALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSG 198 +AL+RFV AIP++T P+ +A+RAWW TGRS +WPLAIGI+G+ VLVG FVA RFYQ Sbjct 139 SALDRFVHVAIPVMTLPITVVAVRAWWATGRSPFWPLAIGIIGVVVLVGCFVAKRFYQKL 198 Query 199 HLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHEL 258 LAE LL+T Y + AAA+AVPLPRGVNSLGAPQ+A AATAVLFLTLMTRGGPR+RHEL Sbjct 199 DLAESLLLTAYQPLTAAAAIAVPLPRGVNSLGAPQIAAAATAVLFLTLMTRGGPRRRHEL 258 Query 259 ASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPG 318 ASF IT+IA IAAA AFGYGYQ WVPAG IAFGLFIVTNAAKLTVAVARIALPPIPVPG Sbjct 259 ASFVAITSIATIAAAVAFGYGYQHWVPAGAIAFGLFIVTNAAKLTVAVARIALPPIPVPG 318 Query 319 ETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLI 378 ETVDNEELLDPV +AT+EETPTWQAIIAS PASA RLTERSKLAKQLLIGYVT+GTL+ Sbjct 319 ETVDNEELLDPVTAQDATNEETPTWQAIIASAPASAARLTERSKLAKQLLIGYVTAGTLV 378 Query 379 LAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKL 438 LAAG+IAVVV GHFFVHSLVVAGLIT +CGFRSRLYA+RWCAWA+LAA V IPTGL +L Sbjct 379 LAAGSIAVVVHGHFFVHSLVVAGLITVICGFRSRLYADRWCAWAMLAAAVVIPTGLAVRL 438 Query 439 IIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLW 498 +WYPHYAWL+L++YL A+VAL+VVG+ A VRRVSPV+KR LELIDGAM+A+I+P+LLW Sbjct 439 SLWYPHYAWLMLTIYLATAVVALIVVGATAQVRRVSPVMKRILELIDGAMVASIVPLLLW 498 Query 499 ITGVYDTVRNIRF 511 IT V+D VRNIRF Sbjct 499 ITSVFDMVRNIRF 511 >gi|183985423|ref|YP_001853714.1| hypothetical protein MMAR_5452 [Mycobacterium marinum M] gi|183178749|gb|ACC43859.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length=479 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/479 (79%), Positives = 426/479 (89%), Gaps = 0/479 (0%) Query 33 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 92 MTDLVLPAA PME+Y+D+TVA+L+++LEDTPA+VL GFDF AQGVW FARPG PPLKLDQ Sbjct 1 MTDLVLPAAAPMESYVDETVAILADLLEDTPAEVLAGFDFEAQGVWTFARPGFPPLKLDQ 60 Query 93 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 152 SLD+AGVVDGSLLTLV SRTERYRPLVEDVIDAIAVLDESPEF+RTAL RF+ AIPL Sbjct 61 SLDEAGVVDGSLLTLVLASRTERYRPLVEDVIDAIAVLDESPEFNRTALERFLAVAIPLF 120 Query 153 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 212 P+ +AMRAWW+TGRS++WPLAIG++G+A L GSFVA RFYQ+ LAE LLVT+Y +I Sbjct 121 ALPITAVAMRAWWQTGRSVFWPLAIGLIGLAALAGSFVAKRFYQNSRLAESLLVTSYGVI 180 Query 213 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA 272 A AAA+AVPLPRG +SLGAPQ+A AATAVLF+TLM RGGP KRH++A+F VIT+IAVI+A Sbjct 181 AAAAAIAVPLPRGFHSLGAPQLAAAATAVLFITLMMRGGPYKRHDIAAFVVITSIAVISA 240 Query 273 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT 332 A AFGYGYQ WVPAG IAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDP+ Sbjct 241 AVAFGYGYQQWVPAGAIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPITA 300 Query 333 PEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHF 392 +AT+EETPTWQAIIAS PASA RLTERSKLAKQLL+GYVT+GTLILA G+IAVVV GHF Sbjct 301 QDATNEETPTWQAIIASAPASAARLTERSKLAKQLLVGYVTAGTLILAVGSIAVVVHGHF 360 Query 393 FVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSV 452 F+HS++VAGLIT +C FRSRLYA+ WCAWALLAATVAIPTGL KL +WYPHYAWLLL++ Sbjct 361 FIHSMIVAGLITVICSFRSRLYADPWCAWALLAATVAIPTGLAVKLSLWYPHYAWLLLTI 420 Query 453 YLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 YL ALV L+ VG+M VRRVSPV+KR LEL DGAM+A+I+P+LLWITGVYD VRNIRF Sbjct 421 YLAAALVTLISVGAMNQVRRVSPVMKRALELFDGAMVASIVPLLLWITGVYDLVRNIRF 479 >gi|15826897|ref|NP_301160.1| hypothetical protein ML0047 [Mycobacterium leprae TN] gi|221229375|ref|YP_002502791.1| hypothetical protein MLBr_00047 [Mycobacterium leprae Br4923] gi|13092444|emb|CAC29555.1| putative membrane protein [Mycobacterium leprae] gi|219932482|emb|CAR70140.1| putative membrane protein [Mycobacterium leprae Br4923] Length=512 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/512 (75%), Positives = 430/512 (84%), Gaps = 1/512 (0%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +SAPAV AGP AG T ARP+ TRVTILTG+RMTDLVLP+ V +E YID+TVAVLS++LE Sbjct 1 MSAPAVTAGPATAGITPARPSATRVTILTGKRMTDLVLPSTVSIEAYIDETVAVLSDLLE 60 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 D PADVL GFDF+AQGVW FARPGSPP+KLDQSLDDAGVVDGSLLTLVS SRTERYRPLV Sbjct 61 DAPADVLAGFDFSAQGVWTFARPGSPPMKLDQSLDDAGVVDGSLLTLVSTSRTERYRPLV 120 Query 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 EDVIDAIAVL+ESPEF+R A++RF+G AIP+L+ P+ +A+ AWW TGRS +W LAIGIL Sbjct 121 EDVIDAIAVLNESPEFNRKAVDRFIGVAIPVLSLPITAVAVWAWWVTGRSPFWSLAIGIL 180 Query 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 I L GS VA +FY++ L+E LL+T+Y LIA+AAAL PLP GV+SLG PQVA AA A Sbjct 181 SIVALTGSIVAEKFYKNLDLSESLLLTSYPLIASAAALVTPLPNGVDSLGPPQVAAAAAA 240 Query 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 VLFLTL+TRGG R+ ASF IT IA++ A A+G+GYQ WVP G +AFGLFIVTNAA Sbjct 241 VLFLTLLTRGGARRHSGYASFTAITTIAIVVIAIAYGFGYQHWVPTGAVAFGLFIVTNAA 300 Query 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATP-EATSEETPTWQAIIASVPASAVRLTE 359 KLTVAVARIALPPIPVPGETVDNEELLDPV TP EAT EETPTWQAIIASVP SAVRLTE Sbjct 301 KLTVAVARIALPPIPVPGETVDNEELLDPVVTPHEATHEETPTWQAIIASVPDSAVRLTE 360 Query 360 RSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWC 419 RS LAK+LLIGYV SGTLIL +GAIAV+VRGHFF HSLVVA L+T VC FRSRLYAERWC Sbjct 361 RSSLAKRLLIGYVISGTLILCSGAIAVIVRGHFFAHSLVVAFLLTVVCTFRSRLYAERWC 420 Query 420 AWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKR 479 AWALLAA V IPTGLT KL IWY AWLLL+ YL A++AL+V G+ VRRVSPV KR Sbjct 421 AWALLAAAVVIPTGLTVKLCIWYTQIAWLLLTSYLVAAIIALMVFGATVRVRRVSPVTKR 480 Query 480 TLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 +ELIDGA++A+IIP+LLWI GVYD VRN+ F Sbjct 481 IMELIDGAVVASIIPLLLWIAGVYDMVRNLSF 512 >gi|2370277|emb|CAA75198.1| hypothetical protein [Mycobacterium leprae] Length=480 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/480 (75%), Positives = 404/480 (85%), Gaps = 1/480 (0%) Query 33 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 92 MTDLVLP+ V +E YID+TVAVLS++LED PADVL GFDF+AQGVW FARPGSPP+KLDQ Sbjct 1 MTDLVLPSTVSIEAYIDETVAVLSDLLEDAPADVLAGFDFSAQGVWTFARPGSPPMKLDQ 60 Query 93 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 152 SLDDAGVVDGSLLTLVS SRTERYRPLVEDVIDAIAVL+ESPEF+R A++RF+G AIP+L Sbjct 61 SLDDAGVVDGSLLTLVSTSRTERYRPLVEDVIDAIAVLNESPEFNRKAVDRFIGVAIPVL 120 Query 153 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 212 + P+ +A+ AWW TGRS +W LAIGIL I L GS VA +FY++ L+E LL+T+Y LI Sbjct 121 SLPITAVAVWAWWVTGRSPFWSLAIGILSIVALTGSIVAEKFYKNLDLSESLLLTSYPLI 180 Query 213 ATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAA 272 A+AAAL PLP GV+SLG PQVA AA AVLFLTL+TRGG R+ ASF IT IA++ Sbjct 181 ASAAALVTPLPNGVDSLGPPQVAAAAAAVLFLTLLTRGGARRHSGYASFTAITTIAIVVI 240 Query 273 AAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVAT 332 A A+G+GYQ WVP G +AFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPV T Sbjct 241 AIAYGFGYQHWVPTGAVAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVVT 300 Query 333 P-EATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGH 391 P EAT EETPTWQAIIASVP SAVRLTERS LAK+LLIGYV SGTLIL +GAIAV+VRGH Sbjct 301 PHEATHEETPTWQAIIASVPDSAVRLTERSSLAKRLLIGYVISGTLILCSGAIAVIVRGH 360 Query 392 FFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLS 451 FF HSLVVA L+T VC FRSRLYAERWCAWALLAA V IPTGLT KL IWY AWLLL+ Sbjct 361 FFAHSLVVAFLLTVVCTFRSRLYAERWCAWALLAAAVVIPTGLTVKLCIWYTQIAWLLLT 420 Query 452 VYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 YL A++AL+V G+ VRRVSPV KR +ELIDGA++A+IIP+LLWI GVYD VRN+ F Sbjct 421 SYLVAAIIALMVFGATVRVRRVSPVTKRIMELIDGAVVASIIPLLLWIAGVYDMVRNLSF 480 >gi|120401109|ref|YP_950938.1| hypothetical protein Mvan_0081 [Mycobacterium vanbaalenii PYR-1] gi|119953927|gb|ABM10932.1| protein of unknown function DUF571 [Mycobacterium vanbaalenii PYR-1] Length=508 Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/507 (67%), Positives = 418/507 (83%), Gaps = 1/507 (0%) Query 5 AVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPA 64 A A PT++ T RP TTRVTILTGRRMTDLVLP+A P+ETY+D+TV+VL+++L DTP Sbjct 3 ATVAPPTSSNVTPGRPTTTRVTILTGRRMTDLVLPSAAPIETYVDETVSVLADILADTPE 62 Query 65 DVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVI 124 +VL FDF AQGVW+FARPG+PP+KL +SLDDAGVVDGSLLT+VSVSRTERYRPLVEDVI Sbjct 63 NVLADFDFKAQGVWSFARPGAPPIKLTESLDDAGVVDGSLLTVVSVSRTERYRPLVEDVI 122 Query 125 DAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAV 184 DAIAVLDE+PEFDR+AL RFVG +PL V +A+ +W TGR WW +A+G+LG + Sbjct 123 DAIAVLDETPEFDRSALYRFVGLILPLAAFMVACVAILSWSSTGRDWWWAVALGVLGAGL 182 Query 185 LVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFL 244 + GS +A Y+ +AE LLV++ + + A LAVPLP GV+SLGAPQVAGA VL + Sbjct 183 MGGSVLAQNRYRHLDMAESLLVSSLVTLVGAVVLAVPLPEGVDSLGAPQVAGAGALVLLM 242 Query 245 TLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTV 304 L TRGGPR+R E+A+F + A+A+ AA AFGYG+ DWVPAG IAFGL +VTNAAKLTV Sbjct 243 VLATRGGPRRRAEVAAFLAVIALALTIAAVAFGYGWNDWVPAGAIAFGLIVVTNAAKLTV 302 Query 305 AVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLA 364 AVARIALPPIP PGETV N+ELLDPV T +A SEE+ TWQAIIASVP+SA RLTERS+LA Sbjct 303 AVARIALPPIPAPGETVTNDELLDPVTTTDA-SEESETWQAIIASVPSSAARLTERSRLA 361 Query 365 KQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALL 424 K+LLIG++++G LILAAG+IAVVV+GHFF+HS++VAGL+T +CGFRSRLYAERWCAWAL+ Sbjct 362 KRLLIGFLSAGALILAAGSIAVVVQGHFFLHSMIVAGLVTMLCGFRSRLYAERWCAWALM 421 Query 425 AATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELI 484 AA VA+PTG+ +L +WYP AWLLL++Y +AL+A++V+G+ VRR+SPV KR LEL+ Sbjct 422 AAAVAVPTGVVVRLCLWYPERAWLLLAIYTALALLAVIVIGASEGVRRISPVTKRILELL 481 Query 485 DGAMIAAIIPMLLWITGVYDTVRNIRF 511 DGA IAA+IPMLLWI GVYD +RN+RF Sbjct 482 DGATIAAVIPMLLWIAGVYDVLRNLRF 508 >gi|118473897|ref|YP_884486.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118175184|gb|ABK76080.1| probable conserved transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=510 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/507 (67%), Positives = 405/507 (80%), Gaps = 0/507 (0%) Query 5 AVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPA 64 + AA + T RP+TTRVTILTG+RMTDLVLPA P+ETYID+TV+ L+E+LED P Sbjct 3 STAAAADTSSVTPGRPSTTRVTILTGKRMTDLVLPATAPIETYIDETVSFLAELLEDAPK 62 Query 65 DVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVI 124 DVL GF+F QGVWAFARPG+PPLK D+SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVI Sbjct 63 DVLAGFNFGEQGVWAFARPGAPPLKADESLDDAGVVDGSLLTLVSVSRTERYRPLVEDVI 122 Query 125 DAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAV 184 DAIAVLDESP FDRTAL FV A+P++ + + AW +G WW +A+G+LG+ + Sbjct 123 DAIAVLDESPVFDRTALKHFVAIALPIVATIITVATLIAWTRSGHGWWWAVALGVLGLGL 182 Query 185 LVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFL 244 L GS A Y S ++E LL+ +A A LAVPLPRGV+ LGAPQ+AGAA VL L Sbjct 183 LGGSMAAKSRYNSLDMSESLLLAATPALAGAVGLAVPLPRGVDGLGAPQLAGAAAVVLLL 242 Query 245 TLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTV 304 TL TRGGPRKR E+ASF +T+IAV AAA AFGYG+Q+WVPAG IAFGL +VTNAAKLTV Sbjct 243 TLATRGGPRKRAEVASFVAVTSIAVTAAAIAFGYGWQEWVPAGAIAFGLIVVTNAAKLTV 302 Query 305 AVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLA 364 AVARIALPPIP PGE V N+ELLDPV TP++ + +PTWQAIIASVP SA RL ERS+L Sbjct 303 AVARIALPPIPAPGEHVSNDELLDPVVTPDSIDDASPTWQAIIASVPESAARLQERSQLT 362 Query 365 KQLLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALL 424 +QLLIG++++G LIL GAIAVVV+GHFFVHS++VA L+T +CGFRSRLYAERWCAWALL Sbjct 363 RQLLIGFLSAGALILTVGAIAVVVQGHFFVHSMIVASLVTVICGFRSRLYAERWCAWALL 422 Query 425 AATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELI 484 AATVA+PTGL KL +W+P AW+++ +Y +AL+AL+VVG+ VRRVSPV KR LEL Sbjct 423 AATVAVPTGLMIKLSMWWPDSAWIVMGIYTMLALIALIVVGATDGVRRVSPVTKRILELF 482 Query 485 DGAMIAAIIPMLLWITGVYDTVRNIRF 511 DGA IAA+IP+LLWI GVYD +RN+R Sbjct 483 DGAAIAAVIPLLLWIAGVYDLLRNLRL 509 >gi|126432676|ref|YP_001068367.1| hypothetical protein Mjls_0063 [Mycobacterium sp. JLS] gi|126232476|gb|ABN95876.1| protein of unknown function DUF571 [Mycobacterium sp. JLS] Length=487 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/487 (71%), Positives = 402/487 (83%), Gaps = 0/487 (0%) Query 25 VTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPG 84 +TILTGRRMTDLVLPAA P+ETYID+TVAVL+E+LEDTP DVL GFDFTAQGVWAFARPG Sbjct 1 MTILTGRRMTDLVLPAAAPVETYIDETVAVLAEILEDTPKDVLAGFDFTAQGVWAFARPG 60 Query 85 SPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRF 144 +PPLK D+SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDR ALNRF Sbjct 61 APPLKADESLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRAALNRF 120 Query 145 VGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECL 204 VG +IPL++ + M++ +W TG+SLWW LA+ +LG+ +L GS +A Y + ++AE L Sbjct 121 VGVSIPLVSVAITLMSLVSWDRTGQSLWWALALAVLGLGLLGGSLLAQNRYANLNMAESL 180 Query 205 LVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVI 264 L+ + +A AALAVPLP GV SLGAPQ+AGA VL LTL TRGGPRKR E+A+F I Sbjct 181 LIASIPALAGGAALAVPLPNGVGSLGAPQLAGAGAVVLLLTLATRGGPRKRAEVAAFLAI 240 Query 265 TAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNE 324 A+ AAA +GYG+Q WVPAG +AFGL ++TNAAKLTVAVARIALPPIP PGETV N+ Sbjct 241 ATAALTAAAVGYGYGWQYWVPAGAVAFGLIVLTNAAKLTVAVARIALPPIPAPGETVTND 300 Query 325 ELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI 384 ELLDPV + E EE+PTWQAIIASVP SA RL ERS LAK+LLIG++T+G LILA GAI Sbjct 301 ELLDPVTSREGVDEESPTWQAIIASVPESAARLQERSVLAKKLLIGFLTAGALILAVGAI 360 Query 385 AVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPH 444 AVVV+GHFFVHSL+VAGL+ +CGFRSRLYAERWCAWALLA TV +PTG+ +L WYP Sbjct 361 AVVVQGHFFVHSLIVAGLVAAICGFRSRLYAERWCAWALLAVTVIVPTGVMVRLCQWYPD 420 Query 445 YAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYD 504 AWL+L++Y + VALVV+G+ VRRVSPV KR LEL+DGA IAA+IP+LLWI VYD Sbjct 421 DAWLVLAIYTALGAVALVVIGATDGVRRVSPVTKRILELVDGAAIAAVIPLLLWIASVYD 480 Query 505 TVRNIRF 511 +RN+RF Sbjct 481 VLRNLRF 487 >gi|108797054|ref|YP_637251.1| hypothetical protein Mmcs_0073 [Mycobacterium sp. MCS] gi|108767473|gb|ABG06195.1| protein of unknown function DUF571 [Mycobacterium sp. MCS] Length=509 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/496 (71%), Positives = 409/496 (83%), Gaps = 0/496 (0%) Query 16 TAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQ 75 T RP+TTRVTILTGRRMTDLVLPAA P+ETYID+TVAVL+E+LEDTP DVL GFDFTAQ Sbjct 14 TPGRPSTTRVTILTGRRMTDLVLPAAAPVETYIDETVAVLAEILEDTPKDVLAGFDFTAQ 73 Query 76 GVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPE 135 GVWAFARPG+PPLK D+SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPE Sbjct 74 GVWAFARPGAPPLKADESLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPE 133 Query 136 FDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFY 195 FDR ALNRFVG +IPL++ + M++ +W TG+SLWW LA+ +LG+ +L GS +A Y Sbjct 134 FDRAALNRFVGVSIPLVSVAITLMSLVSWDRTGQSLWWALALAVLGLGLLGGSLLAQNRY 193 Query 196 QSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKR 255 + ++AE LL+ + +A AALAVPLP GV SLGAPQ+AGA VL LTL TRGGPRKR Sbjct 194 ANLNMAESLLIASIPALAGGAALAVPLPNGVGSLGAPQLAGAGAVVLLLTLATRGGPRKR 253 Query 256 HELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIP 315 E+A+F I A+ AAA +GYG+Q WVPAG +AFGL ++TNAAKLTVAVARIALPPIP Sbjct 254 AEVAAFLAIATAALTAAAVGYGYGWQYWVPAGAVAFGLIVLTNAAKLTVAVARIALPPIP 313 Query 316 VPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSG 375 PGETV N+ELLDPV + E EE+PTWQAIIASVP SA RL ERS LAK+LLIG++T+G Sbjct 314 APGETVTNDELLDPVTSREGVDEESPTWQAIIASVPESAARLQERSVLAKKLLIGFLTAG 373 Query 376 TLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLT 435 LILA GA+AVVV+GHFFVHSL+VAGL+ +CGFRSRLYAERWCAWALLA TV +PTG+ Sbjct 374 ALILAVGAVAVVVQGHFFVHSLIVAGLVAAICGFRSRLYAERWCAWALLAVTVIVPTGVM 433 Query 436 AKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPM 495 +L WYP AWL+L++Y + VALVV+G+ VRRVSPV KR LEL+DGA IAA+IP+ Sbjct 434 VRLCQWYPDDAWLVLAIYTALGAVALVVIGATDGVRRVSPVTKRILELVDGAAIAAVIPL 493 Query 496 LLWITGVYDTVRNIRF 511 LLWI VYD +RN+RF Sbjct 494 LLWIASVYDVLRNLRF 509 >gi|119866139|ref|YP_936091.1| hypothetical protein Mkms_0082 [Mycobacterium sp. KMS] gi|119692228|gb|ABL89301.1| protein of unknown function DUF571 [Mycobacterium sp. KMS] Length=487 Score = 630 bits (1624), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 341/487 (71%), Positives = 402/487 (83%), Gaps = 0/487 (0%) Query 25 VTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPG 84 +TILTGRRMTDLVLPAA P+ETYID+TVAVL+E+LEDTP DVL GFDFTAQGVWAFARPG Sbjct 1 MTILTGRRMTDLVLPAAAPVETYIDETVAVLAEILEDTPKDVLAGFDFTAQGVWAFARPG 60 Query 85 SPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRF 144 +PPLK D+SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDR ALNRF Sbjct 61 APPLKADESLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRAALNRF 120 Query 145 VGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECL 204 VG +IPL++ + M++ +W TG+SLWW LA+ +LG+ +L GS +A Y + ++AE L Sbjct 121 VGVSIPLVSVAITLMSLVSWDRTGQSLWWALALAVLGLGLLGGSLLAQNRYANLNMAESL 180 Query 205 LVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVI 264 L+ + +A AALAVPLP GV SLGAPQ+AGA VL LTL TRGGPRKR E+A+F I Sbjct 181 LIASIPALAGGAALAVPLPNGVGSLGAPQLAGAGAVVLLLTLATRGGPRKRAEVAAFLAI 240 Query 265 TAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNE 324 A+ AAA +GYG+Q WVPAG +AFGL ++TNAAKLTVAVARIALPPIP PGETV N+ Sbjct 241 ATAALTAAAVGYGYGWQYWVPAGAVAFGLIVLTNAAKLTVAVARIALPPIPAPGETVTND 300 Query 325 ELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI 384 ELLDPV + E EE+PTWQAIIASVP SA RL ERS LAK+LLIG++T+G LILA GA+ Sbjct 301 ELLDPVTSREGVDEESPTWQAIIASVPESAARLQERSVLAKKLLIGFLTAGALILAVGAV 360 Query 385 AVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPH 444 AVVV+GHFFVHSL+VAGL+ +CGFRSRLYAERWCAWALLA TV +PTG+ +L WYP Sbjct 361 AVVVQGHFFVHSLIVAGLVAAICGFRSRLYAERWCAWALLAVTVIVPTGVMVRLCQWYPD 420 Query 445 YAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYD 504 AWL+L++Y + VALVV+G+ VRRVSPV KR LEL+DGA IAA+IP+LLWI VYD Sbjct 421 DAWLVLAIYTALGAVALVVIGATDGVRRVSPVTKRILELVDGAAIAAVIPLLLWIASVYD 480 Query 505 TVRNIRF 511 +RN+RF Sbjct 481 VLRNLRF 487 >gi|315441757|ref|YP_004074636.1| secretion protein snm4 [Mycobacterium sp. Spyr1] gi|315260060|gb|ADT96801.1| secretion protein snm4 [Mycobacterium sp. Spyr1] Length=486 Score = 597 bits (1538), Expect = 2e-168, Method: Compositional matrix adjust. Identities = 319/487 (66%), Positives = 394/487 (81%), Gaps = 1/487 (0%) Query 25 VTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPG 84 +TILTGRRMTDLVLP+A P+ETY+D+TVAVL ++L DTP DVL GFDFTAQGVW+FARPG Sbjct 1 MTILTGRRMTDLVLPSAAPIETYVDETVAVLGDILSDTPPDVLAGFDFTAQGVWSFARPG 60 Query 85 SPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRF 144 +PP+KL SLDDAGVVDGSLLT+VSVSRTERYRPLVEDVIDAIAVLDE+PEFDR AL RF Sbjct 61 APPIKLTDSLDDAGVVDGSLLTVVSVSRTERYRPLVEDVIDAIAVLDETPEFDRRALYRF 120 Query 145 VGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECL 204 VG +PL+ MA+ +W TGR WW A+G+LG +L GS ++ R Y + +AE L Sbjct 121 VGLVLPLVALLTTVMAVLSWSSTGRDWWWAAALGVLGTGLLGGSALSQRRYGNLDMAESL 180 Query 205 LVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVI 264 LV+ +++ A LAVPLP GV SLGAPQVAG+ +L + L TRGGP +R E+A+F + Sbjct 181 LVSALVMLTGAVVLAVPLPDGVESLGAPQVAGSGALILLMVLATRGGPHRRAEVAAFLAV 240 Query 265 TAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNE 324 A+A+ AA A+GYG+ WVPAG IAFGL +VTNAAK+TVAVARIALPPIP PGE+V N+ Sbjct 241 VALALTFAAVAYGYGWNAWVPAGAIAFGLIVVTNAAKMTVAVARIALPPIPAPGESVTND 300 Query 325 ELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI 384 ELLDPVAT +A SEE+ TWQAIIASVP SA RLTERS+LAK+LLIG++++G LIL G++ Sbjct 301 ELLDPVATTDA-SEESETWQAIIASVPDSAARLTERSRLAKRLLIGFLSAGALILVLGSV 359 Query 385 AVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPH 444 VVV+GHFFVHS++VAGL+T + GFRSRLY ERWCAWAL+AA VAIP+G+ ++ +WYP Sbjct 360 FVVVQGHFFVHSMIVAGLVTMLAGFRSRLYVERWCAWALMAAAVAIPSGIAVRMSLWYPD 419 Query 445 YAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYD 504 AW +L +Y A VAL+V+G+ VRR+SPV KR LEL+DGA IAA+IP+LLWI+GVYD Sbjct 420 RAWWVLGIYTVAAAVALIVMGATDGVRRISPVTKRILELLDGATIAAVIPLLLWISGVYD 479 Query 505 TVRNIRF 511 +RN+RF Sbjct 480 VLRNLRF 486 >gi|289572135|ref|ZP_06452362.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289545890|gb|EFD49537.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=301 Score = 587 bits (1513), Expect = 2e-165, Method: Compositional matrix adjust. Identities = 299/301 (99%), Positives = 300/301 (99%), Gaps = 0/301 (0%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +SAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE Sbjct 1 MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV Sbjct 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 Query 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL Sbjct 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 Query 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA Sbjct 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 Query 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA Sbjct 241 VLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA 300 Query 301 K 301 Sbjct 301 S 301 >gi|145221359|ref|YP_001132037.1| hypothetical protein Mflv_0764 [Mycobacterium gilvum PYR-GCK] gi|145213845|gb|ABP43249.1| protein of unknown function DUF571 [Mycobacterium gilvum PYR-GCK] Length=486 Score = 583 bits (1502), Expect = 3e-164, Method: Compositional matrix adjust. Identities = 321/487 (66%), Positives = 393/487 (81%), Gaps = 1/487 (0%) Query 25 VTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPG 84 +TILTGRRMTDLVLP+A P+ETY+D+TVAVL ++L DTP DVL GFDFTAQGVW+FARPG Sbjct 1 MTILTGRRMTDLVLPSAAPIETYVDETVAVLGDILSDTPPDVLAGFDFTAQGVWSFARPG 60 Query 85 SPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRF 144 +PP+KL SLDDAGVVDGSLLT+VSVSRTERYRPLVEDVIDAIAVLDE+PEFDR AL RF Sbjct 61 APPIKLTDSLDDAGVVDGSLLTVVSVSRTERYRPLVEDVIDAIAVLDETPEFDRRALYRF 120 Query 145 VGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECL 204 VG +PL+ MA+ +W TGR WW A+G+LG +L GS ++ R Y + +AE L Sbjct 121 VGLVLPLVALLTTVMAVLSWSSTGRDWWWAAALGVLGTGLLGGSALSQRRYGNFDMAESL 180 Query 205 LVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVI 264 LV+ + + A LAVPLP GV SLGAPQVAGA +L + L TRGGP +R E+A+F + Sbjct 181 LVSALVTLTGAVVLAVPLPDGVESLGAPQVAGAGALILLMVLATRGGPHRRAEVAAFLAV 240 Query 265 TAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNE 324 A+A+ AA A+GYG+ WVPAG IAFGL +VTNAAK+TVAVARIALPPIP PGE+V N+ Sbjct 241 VALALTFAAVAYGYGWNAWVPAGAIAFGLIVVTNAAKMTVAVARIALPPIPAPGESVTND 300 Query 325 ELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI 384 ELLDPVAT +A SEE+ TWQAIIASVP SA RLTERS+LAK+LLIG++++G LIL G++ Sbjct 301 ELLDPVATTDA-SEESETWQAIIASVPDSAARLTERSRLAKRLLIGFLSAGALILVLGSV 359 Query 385 AVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPH 444 VVV+GHFFVHS++VAGL+T + GFRSRLY ERWCAWAL+AA VAIP+G+ ++ +WYP Sbjct 360 FVVVQGHFFVHSMIVAGLVTMLAGFRSRLYVERWCAWALMAAAVAIPSGIAVRMSLWYPD 419 Query 445 YAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYD 504 AW +L +Y A VAL+VVG+ VRR+SPV KR LEL+DGA IAA+IP+LLWI+GVYD Sbjct 420 RAWWVLGIYTVAAAVALIVVGATDGVRRISPVTKRILELLDGATIAAVIPLLLWISGVYD 479 Query 505 TVRNIRF 511 +RN+RF Sbjct 480 VLRNLRF 486 >gi|289760046|ref|ZP_06519424.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T85] gi|289715610|gb|EFD79622.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T85] Length=266 Score = 511 bits (1316), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 261/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%) Query 250 GGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARI 309 G PRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARI Sbjct 5 GRPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARI 64 Query 310 ALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLI 369 ALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLI Sbjct 65 ALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLI 124 Query 370 GYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVA 429 GYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVA Sbjct 125 GYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAATVA 184 Query 430 IPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMI 489 IPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMI Sbjct 185 IPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMI 244 Query 490 AAIIPMLLWITGVYDTVRNIRF 511 AAIIPMLLWITGVYDTVRNIRF Sbjct 245 AAIIPMLLWITGVYDTVRNIRF 266 >gi|289748411|ref|ZP_06507789.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289688998|gb|EFD56427.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=256 Score = 462 bits (1189), Expect = 5e-128, Method: Compositional matrix adjust. Identities = 238/254 (94%), Positives = 240/254 (95%), Gaps = 0/254 (0%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +SAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE Sbjct 1 MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV Sbjct 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 Query 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL Sbjct 121 EDVIDAIAVLDESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL 180 Query 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATA 240 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAG Sbjct 181 GIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGRRYG 240 Query 241 VLFLTLMTRGGPRK 254 L G P + Sbjct 241 RAVFDLDDAGRPSE 254 >gi|289760045|ref|ZP_06519423.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|289715609|gb|EFD79621.1| transmembrane protein [Mycobacterium tuberculosis T85] Length=198 Score = 394 bits (1013), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%) Query 33 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 92 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ Sbjct 1 MTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQ 60 Query 93 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 152 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL Sbjct 61 SLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAIPLL 120 Query 153 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 212 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI Sbjct 121 TAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLI 180 Query 213 ATAAALAVPLPRGVNSLG 230 ATAAALAVPLPRGVNSLG Sbjct 181 ATAAALAVPLPRGVNSLG 198 >gi|296393782|ref|YP_003658666.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] gi|296180929|gb|ADG97835.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] Length=502 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 147/540 (28%), Positives = 245/540 (46%), Gaps = 67/540 (12%) Query 1 LSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE 60 +S+PA+ T ++ PA RV +L G D+ LP+ VP+ I D VA++ + Sbjct 1 MSSPAL----TKDSGSSIEPALCRVAVLGGNAQFDVGLPSEVPVAVLIPDLVALIQTRVP 56 Query 61 DTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 + + G A+ W R G P+ L ++L +AGV DG LL L +V+ E PL+ Sbjct 57 NLGGE---GSQNEARNQWTLGRVGQAPIPLTKTLAEAGVHDGDLLILRAVAAEES--PLL 111 Query 121 -EDVIDAIAVLDESPEFDRTALN--RFVGAAIPLLTAPVI---------GMAMRAWWETG 168 +DVIDA+A +++ F N R++G A L+ A +A + +E Sbjct 112 FDDVIDAVARVNQH-AFRHWGPNAARYLGMAT-LVVASFFAARLLFLYGSVAHESRFEDF 169 Query 169 RSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNS 228 S P+ + + G+ + +V R Y +A L I + VP P G++S Sbjct 170 LS---PVLLIVWGLFFHIAGWVIGRRYHQHTIANVLCWCGLPFIFFGVMVCVPGPIGLSS 226 Query 229 LGAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDW----- 283 + A A++ R L+ TA+A +A Y D+ Sbjct 227 IWAACAVAFVFAII----------SSRVSLSGMVQHTAVATLALLVGLAYADMDYFGHST 276 Query 284 --VPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETP 341 V A + +FI+++A+K T+A+A++ LPP+P G+ VD EE+ D + E Sbjct 277 QVVGAALVCMAIFIISSASKFTIALAKLPLPPVPTAGQAVDAEEI-DLHPSVEGIG---- 331 Query 342 TWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVV-RGHFFVHSLVVA 400 AI A +A L +R+K A L G V + +L+ GA+A + ++ Sbjct 332 ---AIGAMALPNAKDLEQRAKAANNYLTGLVIASSLVAIGGALAAARPTAEYPWQGPLLG 388 Query 401 GLITTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWY-------PHYAW--LLLS 451 ++ V R R + + L+ A+V I +G + + Y H W L L Sbjct 389 VIVAIVLVLRGRSFTD------LVQASVMIVSGFLLFVALLYAGGRGTLEHQPWIALALG 442 Query 452 VYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 V L + +A +++G + + SPV++R E+ + +IA I P++ WI G+Y VRNI Sbjct 443 VALVLFSIAFLIIGVIVPNQTYSPVMRRAGEVFEYTLIALIFPLVFWIMGLYSAVRNIEL 502 >gi|296138071|ref|YP_003645314.1| secretion protein snm4 [Tsukamurella paurometabola DSM 20162] gi|296026205|gb|ADG76975.1| secretion protein snm4 [Tsukamurella paurometabola DSM 20162] Length=528 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 130/453 (29%), Positives = 196/453 (44%), Gaps = 36/453 (7%) Query 3 APAVAAGPTAAGATAARP---ATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVL 59 AP A P AGA +P RV + G + L A + +D + L ++ Sbjct 9 APGGAPSPHQAGAAPGKPVVPEQVRVLVEVGESSVERSLLARRRLSVVMDSVIPGLEQIF 68 Query 60 EDTPADVLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPL 119 D DF+ G W FAR G PL D+SL DAGV+DG L L + +RPL Sbjct 69 PD--------HDFSTAGAWTFAREGGTPLSRDKSLADAGVLDGDRLILAETFSNQTFRPL 120 Query 120 VEDVIDAIAVLDESPEFDRTALNRFV-GAAIPL-LTAPVIGMA------MRAWWETGRSL 171 +E DAI EF R RF G A L L A V+G A + AW L Sbjct 121 IESTADAI------QEFCRQRFRRFTSGTARTLGLIALVLGAAVFAALVLLAWMADSSVL 174 Query 172 WWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNS--L 229 WW I IAV+ + A+R Y S +A L + ++ + + +P G + Sbjct 175 WWFPVAAIGSIAVITAAVSADRQYHSQQVAYALQLAAAPVLFSTGFVLIPPDGGADGAFT 234 Query 230 GAPQVAGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYG--YQDWVPAG 287 A + GA ++ + ++ R LA +++A A + A+A F Y + +PA Sbjct 235 AANVLTGAVFTLIGVVILGRSSGLGAAVLAGLGLVSA-ATVVASALFAYTPLGRPAIPAI 293 Query 288 GIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAII 347 G+ GL + + +AR+ +P PGE +D E LD + +E+ T A Sbjct 294 GVIGGLLLANWVQGWALMLARVRPDTLPPPGEDIDRSE-LDVAYHVDTFDDESTTELARG 352 Query 348 ASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVV-RGHFFVHSLVVAGLITTV 406 A L +S+ A +LL G+ + IL A+ ++V H+F +V+A L++ + Sbjct 353 DENTA----LERKSRTAAKLLTGFYVAVAAILVVSALTILVPDTHYFWGEVVIAALVSVI 408 Query 407 CGFRSRLYAERWCAWALLAATVAIPTGLTAKLI 439 C R R +R A A I GL L+ Sbjct 409 CVLRGRTLDDRVHATVFFIAGFLIAAGLAIVLV 441 >gi|262201637|ref|YP_003272845.1| secretion protein snm4 [Gordonia bronchialis DSM 43247] gi|262084984|gb|ACY20952.1| secretion protein snm4 [Gordonia bronchialis DSM 43247] Length=515 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 145/521 (28%), Positives = 226/521 (44%), Gaps = 39/521 (7%) Query 7 AAGPTAAGATAA-RPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPAD 65 A PT G PA RV++L G D+ LPAA+P+ + D VA ++ P+ Sbjct 16 AGTPTQTGREPTIEPALVRVSVLGGNTQLDVALPAAIPLAGLMGDLVA---QIESRNPSH 72 Query 66 ----------VLGGFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTER 115 Q WA A G PL L++SL ++G+ DG LL L S +RT Sbjct 73 HDADDPDADPAGPERRHDRQNRWALALVGREPLPLNRSLSESGIRDGDLLLLTS-TRTGE 131 Query 116 YRPLVEDVIDAIAVLDESPEFDRTALN-RFVGAAIPLLTAPVIGMAMRAWWETGRSLWWP 174 L +DV+DA+A L+ES + +A + R+VG + LL + + A+ T +LW Sbjct 132 SPVLFDDVVDAVAKLNESQFVNWSATSARYVGYGLALLASVAASAGVAAFRRTDETLWVA 191 Query 175 LAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQV 234 G+L +A++ S + +R+Y+ A + + + A L P GAP V Sbjct 192 GLAGLLALALITASTIVSRYYRDPLSATIVSLCAMPAVFVAGMLITP-----GGFGAPHV 246 Query 235 AGAATAVLFLTL----MTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIA 290 L + +T GP L S A+ + A V A A Sbjct 247 TLGFALTLLAAIVSYRLTGVGPITHSALTSAAIGGVLG--CGALILVDAAVSDVAAVVTA 304 Query 291 FGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASV 350 GL ++ A + T+ +A++ LPP+P G +D E++ P T E AI A Sbjct 305 AGLLVIALAPRATIVLAKLPLPPVPTAGAAIDIEDV-----APRPTIEGI---GAIGAMA 356 Query 351 PASAVRLTERSKLAKQLLIGYVTSGTLI-LAAGAIAVVVRGHFFVHSLVVAGLITTVCGF 409 A L RS +A L G V T + + A + G F + A ++ V Sbjct 357 LPKANALERRSFVANSYLTGIVVGFTCVTVVAAVLTAAPLGGFDAKTTAYAAIVGAVLCL 416 Query 410 RSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTV-ALVALVVVGSMA 468 R R +++ + A L+ L L H W L+ L V L +V G +A Sbjct 417 RGRSHSDLFQAATLIIGGALTLITLITGLAFGDDH--WPLIGFGLAVLVLCGALVFGVIA 474 Query 469 HVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 + SPV++R +E+++ ++ I+P+LLWI +Y VR I Sbjct 475 PTQEFSPVIRRAVEILEYLLVTTIVPLLLWILDLYRIVREI 515 >gi|317506955|ref|ZP_07964724.1| secretion protein snm4 [Segniliparus rugosus ATCC BAA-974] gi|316254713|gb|EFV14014.1| secretion protein snm4 [Segniliparus rugosus ATCC BAA-974] Length=503 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 139/522 (27%), Positives = 235/522 (46%), Gaps = 51/522 (9%) Query 15 ATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTA 74 ++ PA RV +L G D+ LPA VP+ I D VA++ + + + G A Sbjct 6 GSSIEPALCRVAVLGGNAQFDVGLPAEVPVAVLIPDLVALIQTRVPNLGGE---GSQNEA 62 Query 75 QGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV-EDVIDAIAVLDES 133 + W R G P+ L ++L +AGV DG LL L +V+ E PL+ +DVIDA++ +++ Sbjct 63 RNQWTLGRVGQAPIPLTKTLAEAGVYDGDLLILRAVAAEES--PLLFDDVIDAVSRVNQH 120 Query 134 PEFDRTALN--RFVGAAIPLLTAPVIGMAMRAWWETG--------RSLWWPLAIGILGIA 183 F N R++G A ++ + A R + G P+ + G+ Sbjct 121 -AFRHWGPNAARYLGMATLVVAS---FFAARLLFLYGSVPHESRFEDFLAPVLCIVWGVF 176 Query 184 VLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLP-RGVNSLGAPQVAGAATAVL 242 V ++ R Y ++ L I ++VP N G V A T Sbjct 177 FHVSGWIIGRRYHQHAISNVLCWCGVPFIFFGVMVSVPGDTSKANVWGLSSVWAACTVTF 236 Query 243 FLTLMTR----GGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTN 298 + +++ G +A+F ++ +A A F + YQ V A + +FI++ Sbjct 237 VIAIISSRISTSGTVLHTAIATFTLLLGLAY-ADMDIFHHSYQV-VGAALVCAAIFIISA 294 Query 299 AAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLT 358 +K +A+A++ LPP+P G+ VD EE+ D + E AI A +A L Sbjct 295 GSKFAIALAKLPLPPVPTAGQAVDAEEI-DLHPSVEGIG-------AIGAMALPNAKDLE 346 Query 359 ERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFV-HSLVVAGLITTVCGFRSRLYAER 417 +R+K + L G V + +LI GA+A + V+A ++ V R R + + Sbjct 347 QRAKASNHYLTGLVIASSLIAIGGALAAARPTAAYPWQGPVLATIVAIVLVLRGRSFTD- 405 Query 418 WCAWALLAATVAIPTGLTAKLIIWY-------PHYAW--LLLSVYLTVALVALVVVGSMA 468 L+ A+V I +G + + Y + W L L V L + +A +++G + Sbjct 406 -----LVQASVMIGSGFFLFVALIYGGGRGSLQNQPWIALALGVALVLFSIAFLIIGVVV 460 Query 469 HVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIR 510 + SPV++R E+ + +IA I P++ WI G+Y VRNI Sbjct 461 PNQTYSPVMRRAGEVFEYTLIAFIFPLVFWIMGLYSAVRNIE 502 >gi|343925122|ref|ZP_08764654.1| hypothetical protein GOALK_033_01130 [Gordonia alkanivorans NBRC 16433] gi|343765053|dbj|GAA11580.1| hypothetical protein GOALK_033_01130 [Gordonia alkanivorans NBRC 16433] Length=514 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 154/523 (30%), Positives = 237/523 (46%), Gaps = 46/523 (8%) Query 8 AGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVL------ED 61 AG + TA P RV++L G D+ LPA +P+ I D VA + +D Sbjct 17 AGDRSRSDTAIEPQLVRVSVLGGNTQLDVGLPAGIPIAGLIGDLVAQIESRNPTRHDPDD 76 Query 62 TPADVLG-GFDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLV 120 AD G G Q W A G PL L +SL ++G+ DG LL L S +RT+ L Sbjct 77 PDADSRGRGRPHDRQNRWTLALVGQEPLPLHRSLSESGIRDGDLLLLTS-TRTDESPVLF 135 Query 121 EDVIDAIAVLDESPEFDRTALN-RFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGI 179 +DV+DA+A L+ES TA + R+VG A+ L+ A V + A +LW G+ Sbjct 136 DDVVDAVARLNESQFVGWTATSARYVGHALALVAAVVAAAGLAASRIDSGALWLSGLSGL 195 Query 180 LGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAAT 239 I ++ + + R+Y+ L+ +L + A P+ + P GAA Sbjct 196 AVIGLVTAATIVARYYRD-QLSSTIL----------SVCAAPMAFVTGMILTPGSYGAAH 244 Query 240 AVL--FLTLMTRGGPRKRHELASFAVITAIAVIAAA--AAFGYGYQ-------DWVPAGG 288 L LTL+T + + + AV AA A G G + V A Sbjct 245 LTLGFALTLVT---AVITYRMTAVGATAHSAVTGAAVLGALGCGARLLLDADTSDVAAVM 301 Query 289 IAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIA 348 A GL ++ + +LT+ +A++ LPP+P G +D +++ P+ + E AI A Sbjct 302 AAVGLLLIGLSPRLTILLAKLPLPPVPTAGAAIDIKDI-----EPQPSIEGI---GAIGA 353 Query 349 SVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVV-RGHFFVHSLVVAGLITTVC 407 + A L RS +A L G V T I+A A+ F S A +I V Sbjct 354 TALPKADALERRSYIANAYLTGIVGGLTAIVAISAVLTAAPLAGFEWKSAAYAAIIGVVL 413 Query 408 GFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLT-VALVALVVVGS 466 R R +++ + A L+ + L A L + W ++S L V LVA +V G Sbjct 414 CLRGRSHSDLFQAAILIIGGSLVVLTLLAGLA--FGDGRWPIISFALGGVVLVAALVFGV 471 Query 467 MAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 +A + SPV++R E+ + ++A I+P+LLW+ +Y VR I Sbjct 472 VAPHQDFSPVMRRWAEIGEYILVALIVPLLLWLLDLYRIVREI 514 >gi|145226050|ref|YP_001136704.1| Fis family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|145218513|gb|ABP47916.1| transcriptional regulator, Fis family [Mycobacterium gilvum PYR-GCK] Length=473 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 136/507 (27%), Positives = 227/507 (45%), Gaps = 58/507 (11%) Query 21 ATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE-DTPADVLGGFDFTAQGVWA 79 A +RV + DLVLP++VP+ +I D + L+E + ++P D G W Sbjct 8 ALSRVAVRYDTTQKDLVLPSSVPIGEFITDVIDALAEDADIESPRD----------GHWT 57 Query 80 FARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRT 139 AR +K DQ+L+DA V+DG++L L SV+ TERYRP++EDV+DA++ E+ Sbjct 58 LARMDGA-IKPDQTLNDARVLDGAILELRSVASTERYRPVIEDVVDAVS---EAAAQAAR 113 Query 140 ALNRFVGAAIPLLTAPVIGMAMRA-----WWETGRSLWWPLAIGILGIAVLVGSFVANRF 194 + L G+A+ A WW G S W + A L+G A Sbjct 114 PFDAAAARRAGLAGLVAGGVALCAGQWALWWANGFSWIWMAVGLVGAAAALIGMTSATLR 173 Query 195 YQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQV----AGAATAVLFLTLMTRG 250 Y+S A +++ A A VP+ + G + G A L L+TR Sbjct 174 YRSPD-ASTAWAVVWVVAAAAIGQVVPVSQRTAVPGVAHLLISAVGMGIAALCALLITR- 231 Query 251 GPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVP----AGGIAFGLFIVTNAAKLTVAV 306 RH LA+++ + A+A AA Y + P AG + GL + + + + Sbjct 232 ----RH-LAAYSSVIAMAAAAALTCVVVEYTELAPSAIAAGAVLVGLIGLLQVPRTALGL 286 Query 307 ARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQ 366 ARI LPP+ PG +E ++ + +A ET L R++ A Q Sbjct 287 ARITLPPVLAPG-----QEDIEVGSGVDADELET----------------LRLRAQRAVQ 325 Query 367 LLIGYVTSGTLILAAGAIAVVVRGHFFVHSLV-VAGLITTVCGFRSRLYAERWCAWALLA 425 L G + + +++ A V ++V ++ +A + V R R + A+A+ + Sbjct 326 LTSGLMVATVAVVSVAAAVVFDPSSYYVRQMIGIAVCVVLVLVIRGRTMPNQIQAYAMFS 385 Query 426 ATVAIPTGLTAK-LIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELI 484 VA+ G+ A+ L+ W A +++ + V L V+ + R V+P V R ++ + Sbjct 386 GAVAVIIGVAARALLAWPSGVAPIVVMAAVAAVTVGLSVIAIVVPGRSVNPRVSRWVQWL 445 Query 485 DGAMIAAIIPMLLWITGVYDTVRNIRF 511 A + P+ W+ GVY T+R++ Sbjct 446 GNAALGVAFPLCFWVMGVYATLRDLSL 472 >gi|169630836|ref|YP_001704485.1| hypothetical protein MAB_3757 [Mycobacterium abscessus ATCC 19977] gi|169242803|emb|CAM63831.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=511 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 134/525 (26%), Positives = 226/525 (44%), Gaps = 68/525 (12%) Query 23 TRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLE----DTPADVLGGFDFTAQGVW 78 RV+I R DL LP +VP+ + V ++++ + +P D + + W Sbjct 18 CRVSIQAERTQVDLALPTSVPLALLVGSIVDIINQHVGVPELTSPEDAV-------ETHW 70 Query 79 AFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLD--ESPEF 136 +RPG PPL++ +L + V DG LL L S PL +DV A++ + + Sbjct 71 RLSRPGQPPLQMSSTLGELEVRDGDLLILTR-SDVAAPDPLFDDVFLAVSTFRTVSAHPW 129 Query 137 DRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQ 196 R A R +GA++ L+A + A+ T L P+ + + + + ANR Y Sbjct 130 SRNA-ARILGASVCGLSALLGATALLRAGATNPGLLLPIIAVAIALVAMTAAVFANRVYD 188 Query 197 SGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRH 256 + L A A AL VP GAP A + ++++ Sbjct 189 DSLASVMLSHCAVGFSAVAGALFVP-----GKYGAPHAMLALMVAMVVSILAM------- 236 Query 257 ELASFAVITAIAVIAAAAAFGY----GYQDWVPA----GGI--AFGLFIVTNAAKLTVAV 306 A+ T++ +A+A+ G+ GY + P G + + G+ V + ++ + + Sbjct 237 -RATGTGTTSLVAVASASFLGFAAALGYVLFEPPIYSLGAVLGSVGICAVALSPRVAMVL 295 Query 307 ARIALPPIPVPGETVDNEELLDPVATPEATS---EETPTWQAIIASVPASAVRLTERSKL 363 AR+ LPP+P G E P+ E E + A P +R E++ Sbjct 296 ARLPLPPVPTQGAPSRPEHSTAPIEAIEGLDGLDTEGDDVEDATALPPLPDLR--EKALR 353 Query 364 AKQLLIGYVTSGTLILAAGAIAVVVR-----GHF--FVHSL---VVAGLITTVCGFRSRL 413 A +L G V + + A GA+ + GH H L V+AGLI R+R Sbjct 354 AHAVLTGLVCGTSAVTAVGAMLAALTFSGAGGHHPTGAHRLSGVVLAGLIALAMMLRARS 413 Query 414 YAERWCAWALLAATVAIPTG-------LTAKLIIWYPHYAWLLLSVYLTVALVALVVVGS 466 +A+ LA TVAI G A + + YP A + +V +A + + +G Sbjct 414 HAD-------LAQTVAINLGGIAIPAAAFAFVAVAYP-TAAVFTTVLAAIAAGSAIALGF 465 Query 467 MAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 + R+ SPV +RT+E+I+ ++ I+P+ +W+ GVY VR + Sbjct 466 LVSARKYSPVARRTVEIIEYIALSLIVPIAVWVCGVYSAVRGLNL 510 >gi|54022794|ref|YP_117036.1| hypothetical protein nfa8270 [Nocardia farcinica IFM 10152] gi|54014302|dbj|BAD55672.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=493 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 146/513 (29%), Positives = 223/513 (44%), Gaps = 38/513 (7%) Query 12 AAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFD 71 ++GA AA P RV+++ G D+ LPA VP+ T++ D VA++ D P D G Sbjct 6 SSGAVAAEPELCRVSVIGGNTQVDVGLPATVPIATFMRDLVALIESRNPD-PVDSEEGAA 64 Query 72 FTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVL- 130 W AR G + ++L +A V DG LL L SV+ E L +DVIDA++ L Sbjct 65 PLETQHWTLARLGRDAIPPSRTLTEAEVYDGELLVLRSVTAKES-PALFDDVIDAVSRLT 123 Query 131 --DESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWE-TGRSLWWPLAIGILGIAVLVG 187 D R+A R+ G A +T ++ + + A G L P G+A + Sbjct 124 AEDHHSWSPRSA--RWTGLA-ACVTVVLLALGLFAVGRGHGGGLAAPFLATGAGLAAVAA 180 Query 188 SFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLM 247 + +A R Y A L +T LL AAL VP LG+P + + L + + Sbjct 181 AVIAVRKYDDRLTALWLSLTALLLFFGGAALFVP-----GELGSPHLMLGCSVSLVIAVG 235 Query 248 TRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFI-----VTNAAKL 302 L + AV +A+ AA D P IA GL + ++ +L Sbjct 236 LYRATGVGATLCAAAV--TLALFGGVAALVRMVWD-TPLPRIAVGLLVGAIILLSMIPRL 292 Query 303 TVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQ---AIIASVPASAVRLTE 359 AR+ +PP+P G +D A E+ PT + AI A+ SAV L E Sbjct 293 AAVAARLPVPPVPTAGAAID-----------PADHEQRPTIEGIGAIGATALPSAVGLGE 341 Query 360 RSKLAKQLLIGYVTSGTLILAAGAIAVVV-RGHFFVHSLVVAGLITTVCGFRSRLYAERW 418 R++ A Q G V ++ A GA+ GH L +A + + R R +A+ Sbjct 342 RARAANQYQTGMVIGAAVVAAVGALGTADPLGHVRWQGLTLAVITAIILCLRGRAFADLV 401 Query 419 CAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVK 478 A L+ A ++ GL L L + L +A + H+ ++PV + Sbjct 402 QAGTLIVAGASVIAGLLTALAFGDSGLWLLSGGLLLALAAAVVAFGVIGPHIE-ITPVTR 460 Query 479 RTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF 511 R E+ + +I AIIP+ LW+ G+Y RN+ Sbjct 461 RAGEIFEYLLICAIIPLALWLLGIYSMARNLNL 493 >gi|54022817|ref|YP_117059.1| hypothetical protein nfa8500 [Nocardia farcinica IFM 10152] gi|54014325|dbj|BAD55695.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=488 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 147/513 (29%), Positives = 222/513 (44%), Gaps = 68/513 (13%) Query 20 PATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWA 79 P RVTIL D+ +P VP+ I V ++++ D G A+ W Sbjct 21 PDLARVTILAKHTQVDMAIPVDVPVALVIPSVVDMVAQHSRSNDFDNEGERFEPAE--WV 78 Query 80 FARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDE------S 133 AR G PP SL + GV DG LL L S S T PL +D++ +A+ D + Sbjct 79 LARIGHPPFSNSLSLGEHGVRDGELLMLESASHTAP-TPLFDDIMYNVAIADADHFRGWT 137 Query 134 PEFDR------TALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVG 187 PE R A+ VG + LL +P AM W +L A+ IL ++V Sbjct 138 PETARLTGSVLAAVTMLVGC-LGLLASPA---AMPEWVSGSIAL----AVVIL---LVVA 186 Query 188 SFVANRFYQSGHLAECLLVTTYLLIA--TAAALAVPLPRGVNSLGAPQVAGAATAVLFLT 245 V +R Y G A L++ L A TA L VP G L ATA+L Sbjct 187 GMVLSRMY--GDTATALVLGGCALPAAFTAGMLYVPDHYGWAHLLLGGTLLGATAILAWR 244 Query 246 LMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAA----- 300 + G LA F A+AV AA G P I + A Sbjct 245 VTGVG-------LALFIGTAAVAVYLVPAAL-VGLLTDQPLRAIGAVAAALGLAGLSLAP 296 Query 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 +L++ +A++ LPP+P PG +D E DP PT +A L + Sbjct 297 RLSMLLAKLPLPPVPSPGTPIDPTED-DP-----DDHRALPTMEA-----------LRVK 339 Query 361 SKLAKQLLIGYVTSGTLILAAGAIAVV--VRGHFFVHSLVVAGLITTVCGFRSRLYAERW 418 S+ A+ L G V + TL+ AAGA+A + + +A + V FRSR YA Sbjct 340 SERARMYLAGLVAATTLVTAAGALAATDPQADDPYWQGIALALVCAVVLMFRSRTYAGAE 399 Query 419 CAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVY--LTVALVALVVVGSMAHVRRVSPV 476 A L+A AI +++ + L+V+ + LVA +++G + + +P Sbjct 400 QAVVLIAGGAAI----VLIMLVGAAFTMEIPLAVFGATMLMLVAALILGIIIPNQSATPP 455 Query 477 VKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 ++R +EL++ A +AA++P++ W+T +Y VR + Sbjct 456 MRRGVELLEYAFVAAVLPLVFWVTSLYSLVRGL 488 >gi|226365631|ref|YP_002783414.1| hypothetical protein ROP_62220 [Rhodococcus opacus B4] gi|226244121|dbj|BAH54469.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=490 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 128/504 (26%), Positives = 210/504 (42%), Gaps = 34/504 (6%) Query 15 ATAARPAT----TRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGF 70 A++ RP R+T+L+ D+ +P VP+ + V + + D Sbjct 12 ASSTRPGAAADLCRITVLSKHSQVDMAVPFGVPLAILVPGIVDTIRT--NRSTNDFDDSL 69 Query 71 DFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVL 130 + W A+ G PL +L + G+ DG LL L SV + PL +D++ +A+ Sbjct 70 EQYEPSEWVLAKIGHSPLSTTLTLHEHGIRDGDLLVLQSVHASAP-PPLFDDIMYNVAIA 128 Query 131 DESPEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILG-IAVLVGSF 189 D + + T + V ++ + V+G W G + + + L+ Sbjct 129 DVEGDREWTRGSARVVGSVAAVLGTVVGSFALLWSGAGTEGFLGAGCAVAAALLFLIAGA 188 Query 190 VANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTR 249 V R Y + L L A L VP G L TA+L L L Sbjct 189 VTARVYGDAPSSVVLSGCAVPLSFAAGMLFVPGDLGAAHLLLGLALAGTTAILALRL--- 245 Query 250 GGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFI-VTNAAKLTVAVAR 308 GG R + +V + IAA A +G G+ I + +A++++ +A+ Sbjct 246 GGAGLR-LFTALSVTSLFGSIAALVATLFGNPIAGVGAGVVAAALIGLAFSARVSILLAK 304 Query 309 IALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLL 368 + LPP+P PG +VD E P++ + L +R+ A + L Sbjct 305 LPLPPVPAPGTSVDPSEDD------PDDEVTMPSFDS-----------LAQRAARAHKYL 347 Query 369 IGYVTSGTLILAAGAIAVV---VRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLA 425 G V + T + GA+ V F L +A TV FR R Y+ A L+A Sbjct 348 TGLVGAMTALAVTGALLAAHPGVHDGIFWPGLSLAVATATVLMFRGRTYSSAEQAVPLIA 407 Query 426 ATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELID 485 V I L + P +A +V + A+ LV+ G +A + SPV++R ELID Sbjct 408 GGVTILVLLLTGAAVAVPDFAIASFAVAILFAVGGLVL-GILAPRQTFSPVMRRVAELID 466 Query 486 GAMIAAIIPMLLWITGVYDTVRNI 509 A+IA+I+P++ W+TG+Y +R + Sbjct 467 LAVIASIVPLVCWVTGLYSLMRGL 490 >gi|118616926|ref|YP_905258.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118569036|gb|ABL03787.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=472 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 114/384 (30%), Positives = 164/384 (43%), Gaps = 63/384 (16%) Query 24 RVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARP 83 RV IL R+T++ LPA +P+ + ++ V ED A G D G + A Sbjct 10 RVAILADSRLTEVALPAELPLREILPAVQRLVIPVAEDGDA---GSADLGIAGHLSLAPV 66 Query 84 GSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDES-------PEF 136 G P LD SLD GVVDG LL L V +VED+ DA + S Sbjct 67 GGAPFSLDASLDTVGVVDGDLLVLQPVPTGPAAPGIVEDIADAAMIFSTSRLRPWDARHL 126 Query 137 DRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAV-LVGSFVANRFY 195 R AL +G A L + +A R TG +L L + ++ +A+ L G + R Sbjct 127 QRGALAALIGVA---LAGSGLAVAYRV--ATG-ALAGLLIVSVIAVAMALAGLLLGARSP 180 Query 196 QSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQV---AGAATAVLFLTLMTRGGP 252 ++G L + + A ALAVP S GA QV A TA + LM G Sbjct 181 RTGI---ALSIAALAPVGAALALAVP-----GSFGAAQVLLAAAGVTAWSLICLMVPGEQ 232 Query 253 RKRHELASFAVITAIAVIAAAAAFGYGYQ-DW-VPAGGIAFG-----LFIVTNAAKLTVA 305 R+R A+ TA+AV+ AA G + W +P I G L + AA+L+ Sbjct 233 RERI----VALFTAVAVVGAALLLAAGVELLWQLPVSSIGCGLIVAALLVTIQAAQLSAV 288 Query 306 VARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAK 365 AR LP IP PG DP TP A S ++ +P R +++ Sbjct 289 WARFPLPVIPAPG---------DP--TPSAPSLR------VLEDLP-------RRVRVSD 324 Query 366 QLLIGYVTSGTLILAAGAIAVVVR 389 G++ + L+ G++A+ +R Sbjct 325 AHQSGFIAAAVLLSVLGSVAIALR 348 >gi|183980577|ref|YP_001848868.1| transmembrane protein [Mycobacterium marinum M] gi|183173903|gb|ACC39013.1| conserved transmembrane protein [Mycobacterium marinum M] Length=472 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 112/382 (30%), Positives = 160/382 (42%), Gaps = 59/382 (15%) Query 24 RVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARP 83 RV IL R+T++ LPA +P+ + ++ V ED A G D G + A Sbjct 10 RVAILADSRLTEVALPAELPLREILPAVQRLVIPVAEDGDA---GSADLGIAGHLSLAPV 66 Query 84 GSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDES-------PEF 136 G P LD SLD GVVDG LL L V +VED+ DA + S Sbjct 67 GGAPFSLDASLDTVGVVDGDLLVLQPVPTGPAAPGIVEDIADAAMIFSTSRLRPWDARHL 126 Query 137 DRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAV-LVGSFVANRFY 195 R AL +G A L + +A RA TG +L L + ++ +A+ L G + R Sbjct 127 QRGALAALIGVA---LAGSGLAVAYRA--ATG-ALAGLLIVSVIAVAMALAGLLLGARSP 180 Query 196 QSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQV---AGAATAVLFLTLMTRGGP 252 ++G L + + A ALAVP S GA QV A TA + LM G Sbjct 181 RTGI---ALSIAALAPVGAALALAVP-----GSFGAAQVLLAAAGVTAWSLICLMVPGEQ 232 Query 253 RKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFG-----LFIVTNAAKLTVAVA 307 R+R AV A + AA +Q +P I G L + AA+L+ A Sbjct 233 RERIVALFTAVAVVGAALLLAAGAELLWQ--LPVSSIGCGLIVAALLVTIQAAQLSAVWA 290 Query 308 RIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQL 367 R LP IP PG DP TP A S ++ +P R +++ Sbjct 291 RFPLPVIPAPG---------DP--TPSAPSLR------VLEDLP-------RRVRVSDAH 326 Query 368 LIGYVTSGTLILAAGAIAVVVR 389 G++ + L+ G++A+ +R Sbjct 327 QSGFIAAAVLLSVLGSVAIALR 348 >gi|118471932|ref|YP_885034.1| secretion protein Snm4 [Mycobacterium smegmatis str. MC2 155] gi|118173219|gb|ABK74115.1| secretion protein Snm4 [Mycobacterium smegmatis str. MC2 155] Length=475 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 98/364 (27%), Positives = 152/364 (42%), Gaps = 40/364 (10%) Query 30 GRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARPGSPPLK 89 G R+T++ LP+ +P+ + ++ E+ A + + A G P Sbjct 21 GGRLTEMALPSELPLREILPAVQRIVQPARENDGAADPAAAPNPVR--LSLAPIGGAPFS 78 Query 90 LDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNRFVGAAI 149 LD +LD GVVDG LL L +V +VED+ DA + E+ + GAA+ Sbjct 79 LDATLDTVGVVDGDLLALQAVPSGPPAPRIVEDIADAAVIFSEARRRQWGPTHIARGAAL 138 Query 150 PLLTAPVIGMAMRAWWE--TGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVT 207 L+ ++G + TG L + GI V+ V NR S LA L VT Sbjct 139 ALIGLILVGTGLSVAHRVITGDLLGQFIVSGIALATVIAALAVRNR---SAVLATSLAVT 195 Query 208 TYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPRKRHELASF--AVIT 265 + +A A AL VP GAP V AA V +L++ G +A F +T Sbjct 196 ALVPVAAAFALGVP-----GDFGAPNVLLAAAGVAAWSLISMAGSPDDRGIAVFTATAVT 250 Query 266 AIAV--IAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDN 323 + V +A AA+ D + + GL + AA+L+ AR LP IP PG+ Sbjct 251 GVGVLLVAGAASLWVISSDVIGCALVLLGLIVTVQAAQLSAMWARFPLPVIPAPGDPT-- 308 Query 324 EELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGA 383 P A P + + P R ++++ G + +G L+ AG+ Sbjct 309 -----PAARPLSVLADLP-----------------RRVRVSQAHQTGVIAAGVLLGVAGS 346 Query 384 IAVV 387 +A+V Sbjct 347 VALV 350 >gi|289574472|ref|ZP_06454699.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339631849|ref|YP_004723491.1| hypothetical protein MAF_18170 [Mycobacterium africanum GM041182] gi|289538903|gb|EFD43481.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339331205|emb|CCC26887.1| conserved hypothetical membrane protein [Mycobacterium africanum GM041182] Length=503 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 129/525 (25%), Positives = 219/525 (42%), Gaps = 48/525 (9%) Query 5 AVAAGPTAAGATAARPATTRVTILTGRRMT-DLVLPAAVPMETYIDDTVAVLSEVLEDTP 63 AVA P A A P V ++ G + ++L A P+ D + V++ L + Sbjct 3 AVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE-- 60 Query 64 ADVLGG--FDFTAQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVE 121 LG + T +G WA PL+ QSL + V DG L + ++ TER ++E Sbjct 61 ---LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIE 117 Query 122 DVIDAIAVLDESPEFDRTA--LNRFVGAAIPLLTAPVIGMAMRAWWETGRSLW----WPL 175 + A+A D S F R + VGA++ + T V+ + WW + W + Sbjct 118 HISTAVAS-DLSKRFARIDPIVAVQVGASM-VATGVVLATGVLGWWRWHHNTWLTTIYTA 175 Query 176 AIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQ-V 234 IG+L +AV + + + +A+ +L++ + + AAA A+P P +G+PQ V Sbjct 176 VIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAALPGP-----VGSPQAV 230 Query 235 AGAATAVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLF 294 G + L R R+ + +I A+ ++AA A + Sbjct 231 LGFGVLTVAAALALRFTGRRLGIYTTIVIIDALTMLAALARMVAATSAVTLLSSLLLICV 290 Query 295 IVTNAA-KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPAS 353 + +AA L+ +A I LP P E D T + P + P+S Sbjct 291 VAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEG-----PSS 345 Query 354 AVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVRGHFFVH--SLVVAGLITTVCGFRS 411 + +++ A+ L G +T G ++ + + H L++AG + R Sbjct 346 VRDVLLQAERARSFLSGLLT-GLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRG 404 Query 412 RLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVV------- 464 R Y +RW + L V I + + YA L LS L V++VA ++V Sbjct 405 RSYVDRWQSITLAGTAVIIAAAVCVR-------YA-LELSSPLAVSIVAAILVLLPAAGM 456 Query 465 GSMAHVRRV--SPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVR 507 + AHV SP+ ++ +E I+ + I P+ LW+ VY +R Sbjct 457 AAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIR 501 >gi|240172732|ref|ZP_04751391.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=472 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 110/383 (29%), Positives = 151/383 (40%), Gaps = 61/383 (15%) Query 24 RVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARP 83 RV IL R+T++ LPA +P+ + AV V+ G A + A Sbjct 10 RVAILADSRLTEMALPAELPLREILP---AVQRLVIPAAENGDGGEAGSGAAAHLSLAPI 66 Query 84 GSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDES-------PEF 136 G P LD SLD GVVDG LL L V +VED+ DA + S Sbjct 67 GGAPFSLDASLDTVGVVDGDLLALQPVPTGPAAPGIVEDIADAAMIFSSSRLNPWGPKHI 126 Query 137 DRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQ 196 R AL +G +T G+A+ TG GI + L G V R + Sbjct 127 QRGALAAVIG-----VTLVATGLAVSYRVATGALAGLVTVSGIAVVLALAGLLVTARSPR 181 Query 197 SGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQV---AGAATAVLFLTLMTRGGPR 253 +G + + + IA A ALAVP G Q+ A TA + LM R Sbjct 182 TG---TAVSIAALVPIAGALALAVP-----GKFGPAQLLLAAAGVTAWSLICLMVPSAER 233 Query 254 KRHELASFAVITAIAVIAAAAAFGYGYQ-DW------VPAGGIAFGLFIVTNAAKLTVAV 306 +R A TA+AV AA G + W V G I L I AA+L+ Sbjct 234 ERI----VAFFTAVAVTAAGVWLAAGAELLWELPMRSVGCGLIVTALLITIQAAQLSALW 289 Query 307 ARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQ 366 AR LP IP PG DP TP A S ++ +P R +++ Sbjct 290 ARFPLPVIPAPG---------DP--TPSAPSLR------VLEDLP-------RRVRVSDA 325 Query 367 LLIGYVTSGTLILAAGAIAVVVR 389 G++ + L+ G++A+ VR Sbjct 326 HQSGFIAAAVLLSVLGSVAIAVR 348 >gi|296164030|ref|ZP_06846653.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900578|gb|EFG79961.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=498 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/215 (30%), Positives = 95/215 (45%), Gaps = 19/215 (8%) Query 20 PATTRVTILTGRR-MTDLVLPAAVPMETYIDDTVAVLSEVLED---TPADVLGGFDFTAQ 75 P +V +L G + D VLPA V + I+D + ++ +L+D P D F Sbjct 14 PRLCKVHLLVGDDTLIDYVLPAGVALIAVIEDLIPRVNAILKDRGRAPLDDTLTFQLC-- 71 Query 76 GVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIA--VLDES 133 R + PL +SLDD+ V DG LL L+ TER+ P++E+V A+A + Sbjct 72 ------RADATPLDPQRSLDDSRVYDGDLLCLLPTDATERFAPVIEEVSTALARSARQQF 125 Query 134 PEFDRTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGI-LGIAVLVGSFVAN 192 D T R G L A M + WW+ + W P A+ L LV + A Sbjct 126 ATVDVTVARRVAGGLFAALVAWAEVMLAQLWWQ--QHGWLPAAVSWGLAAVFLVSARAAT 183 Query 193 RFY--QSGHLAECLLVTTYLLIATAAALAVPLPRG 225 R Q A+ L+ + + AA++VP P G Sbjct 184 RARDEQRRRSADFLVWSALICAGAGAAMSVPGPPG 218 >gi|226305379|ref|YP_002765337.1| hypothetical protein RER_18900 [Rhodococcus erythropolis PR4] gi|226184494|dbj|BAH32598.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=500 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/224 (30%), Positives = 116/224 (52%), Gaps = 22/224 (9%) Query 289 IAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIA 348 IA L ++T A+L++ AR+ LPP+P P +D++ D + PE Sbjct 296 IAAALIVLTFTARLSMLFARLPLPPVPTPSNPLDDDR--DGLPEPE-------------- 339 Query 349 SVPASAVRLTERSKLAKQLLIGYV--TSGTLILAAGAIAVVVRGHFFV-HSLVVAGLITT 405 +P LTER+ A+ L G + TS + AA A+A G V +L +A Sbjct 340 -LPG-LTELTERAGRARSYLTGLIVATSVVALTAAVALAWSWPGQGIVWPNLALAFATAV 397 Query 406 VCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVG 465 V FR R YA A L++A +++ L + + +A ++ ++ +TV L++L++ Sbjct 398 VLMFRGRTYAGAHQAVPLISAGISVVLALLGGMAWTHRDHALVVFAITMTVLLLSLILG- 456 Query 466 SMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 +A SPV++R EL+D A IAAI+P++ W++G++ +R + Sbjct 457 ILAPQNTFSPVMRRAAELLDLAAIAAIVPLICWVSGLFALMRGL 500 >gi|302524033|ref|ZP_07276375.1| predicted protein [Streptomyces sp. AA4] gi|302432928|gb|EFL04744.1| predicted protein [Streptomyces sp. AA4] Length=466 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 135/507 (27%), Positives = 217/507 (43%), Gaps = 68/507 (13%) Query 23 TRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFAR 82 +RVT++ D+ LPA + + D + +L E+ ++ D GG G WA A+ Sbjct 9 SRVTVVAPTTRIDVALPA----DVAVADLLPMLLEMAKEVTPD--GG---ARHGGWALAK 59 Query 83 PGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRP-LVEDVIDAIAVLDES---PEFDR 138 G PL ++L GVVDG LL L R E P + +DV+DAIA D P Sbjct 60 LGDAPLDPSRTLASLGVVDGELLQLRK--RNENPPPPMYDDVVDAIAEADPDTFRPWTKE 117 Query 139 TALNRFVGAAIPL-LTAPVIGMAMRAWWETGRSLWWPLAIGILGIA-VLVGSFVANRFYQ 196 TA RF AA L L + + G +L +A G+ IA V VG+ +A + YQ Sbjct 118 TA-RRFGHAAGGLALFFSALALFFSGSLYGGSALGPAIAGGLGAIACVAVGATLA-KAYQ 175 Query 197 SGHLAECLLVTTYLLIATAAALAVPLPRGVN-----SLGAPQVAGAATAVLF---LTLMT 248 AE T +LIA+A L + G S+ A + GA ++ L+ Sbjct 176 ----AEA----TGVLIASAGGLPLAFVSGFYIVPGLSVRANLLLGAVLVLIVSAVCILVV 227 Query 249 RGGPRKRHELASFAVITAIAVIAAAAAFGYGYQDWVPAGGIAFGLFIVTNAAKLTVAVAR 308 G R A+ V A+A + A V AG +A L ++ + T+ +A+ Sbjct 228 SAGIRVFIATATAGVFGALAFLVATLVTSADTAS-VAAGTVAVALGCISFLPRATIWLAK 286 Query 309 IALPPIPVPGETVDNEELLDPVATPEATSEET--PTWQAIIASVPASAVRLTERSKLAKQ 366 + LP +P +T E E++ P +QAI +R+ +A Sbjct 287 LPLPYVP---------------STAEELKEDSGFPDYQAI-----------EQRTAVAHD 320 Query 367 LLIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAA 426 + G + A AI + F +++ + T V R+R YA A ALL Sbjct 321 YMTGLMIGCGATTAVAAILAATAPNVF--GIILGVIATLVLLLRARAYANGAQAIALLTT 378 Query 427 TVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHV--RRVSPVVKRTLELI 484 + G+ + + LL V+ + L+A + +R SP ++RT+E+I Sbjct 379 GMVAAAGILLGWLFFSATAEQRLLYVFGALILIAAAALVVGVVFPDQRFSPPLRRTVEII 438 Query 485 DGAMIAAIIPMLLWITGVYDTVRNIRF 511 + IA ++P+ L + +Y T+R++ Sbjct 439 EAICIAVVLPLALGVMDLYSTLRHLNL 465 >gi|118465427|ref|YP_883986.1| hypothetical protein MAV_4863 [Mycobacterium avium 104] gi|118166714|gb|ABK67611.1| conserved hypothetical protein [Mycobacterium avium 104] Length=480 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 113/425 (27%), Positives = 161/425 (38%), Gaps = 68/425 (16%) Query 24 RVTILTGRRMTDLVLPAAVPMETYIDDT----VAVLSEVLEDTPADVLGGFDFTAQGVWA 79 RV IL R+T++ LPA +P+ + V + + A G + + Sbjct 11 RVAILADSRLTEMALPAELPLREILPAVQRLVVPAAANGDSEDGAPSRGAAEVGGAVQLS 70 Query 80 FARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDES--PEFD 137 A G P LD SLD GVVDG LL L V +VED+ DA + S + Sbjct 71 LAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFSTSRLRPWG 130 Query 138 RTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL----------GIAVLVG 187 T + RF A VI +A+ A TG S+ + +A G L + +VG Sbjct 131 TTHIQRFA-------LATVIAVALLA---TGLSVSYRVATGALAGLVAVSAVAALTAIVG 180 Query 188 SFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLM 247 R ++G L + + I A ALAVP G QV AA V +L+ Sbjct 181 LLATARSPRNGM---ALSIAALVPIGAALALAVP-----GRFGPAQVMLAAAGVTAWSLI 232 Query 248 TRGGPR-KRHELASFAVITAIAVIAAAAAFGYGYQDW------VPAGGIAFGLFIVTNAA 300 P +R LA F TA+ A A W + G I L + AA Sbjct 233 ALMAPSAERERLAGFFTATAVLGAAVLLAA-GAELLWHITPVALGCGLIVAALLVTVEAA 291 Query 301 KLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTER 360 L+ AR LP IP PG+ P A P E+ P R Sbjct 292 PLSALWARFPLPVIPAPGDPT-------PSAPPLPVLEDLP-----------------RR 327 Query 361 SKLAKQLLIGYVTSGTLILAAGAIAVVVRGH-FFVHSLVVAGLITTVCGFRSRLYAERWC 419 ++ G++ + L+ A G++A+ +R V G R+R++ C Sbjct 328 VRIGDAHQSGFIAAAVLLSALGSVAIALRPETLSAAGWYVVGATAATSVLRARVWDSAAC 387 Query 420 -AWAL 423 AW L Sbjct 388 KAWLL 392 >gi|119855165|ref|YP_935770.1| hypothetical protein Mkms_5780 [Mycobacterium sp. KMS] gi|119697883|gb|ABL94955.1| protein of unknown function DUF571 [Mycobacterium sp. KMS] Length=505 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/111 (38%), Positives = 56/111 (51%), Gaps = 8/111 (7%) Query 20 PATTRVTILTGR-RMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVW 78 P++ RV++L G DLVLPAAVP+ D T+ ++ +L G D G + Sbjct 22 PSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNRLLRSK------GEDELPVGTY 75 Query 79 AFARP-GSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIA 128 FAR G L + SL GV DG LL V RY PL+E+V A+A Sbjct 76 EFARAVGMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIENVSTALA 126 >gi|229489514|ref|ZP_04383377.1| secretion protein Snm4 [Rhodococcus erythropolis SK121] gi|229323611|gb|EEN89369.1| secretion protein Snm4 [Rhodococcus erythropolis SK121] Length=488 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/224 (29%), Positives = 113/224 (51%), Gaps = 22/224 (9%) Query 289 IAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIA 348 IA L ++T A+L++ AR+ LPP+P P +D++ D + PE Sbjct 284 IAAALIVLTFTARLSMLFARLPLPPVPTPSNPLDDDR--DGLPEPE-------------- 327 Query 349 SVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAIAVVVR--GHFFV-HSLVVAGLITT 405 +P L ER+ A+ L G + + +++ A+A+ G V +L +A Sbjct 328 -LPG-LTELAERAGRARSYLTGLIVATSVVALVAAVALAWSWPGQGIVWPNLALAFATAV 385 Query 406 VCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVG 465 V FR R YA A L+AA +++ L + + +A ++ ++ +TV L+AL++ Sbjct 386 VLMFRGRTYAGAQQAVPLIAAGISVILVLLGDMAWTHRDHALVVFAITMTVLLLALILGI 445 Query 466 SMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 SPV++R EL+D A IAAI+P++ W++G++ +R + Sbjct 446 LAPQ-NTFSPVMRRAAELLDLAAIAAIVPLICWVSGLFALMRGL 488 >gi|296138595|ref|YP_003645838.1| secretion protein snm4 [Tsukamurella paurometabola DSM 20162] gi|296026729|gb|ADG77499.1| secretion protein snm4 [Tsukamurella paurometabola DSM 20162] Length=497 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 138/517 (27%), Positives = 212/517 (42%), Gaps = 65/517 (12%) Query 23 TRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFAR 82 +RV++L G D+ LP P E I + V + + + T A+ WA R Sbjct 16 SRVSVLCGGAQVDVSLPLQTPTEVLIPELVRLFGDRISGT-----------AESAWA--R 62 Query 83 P------GSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAV-LDESPE 135 P G PL Q+ DAG+ +G LL L V+ + +DV D A LD Sbjct 63 PWRLAPVGGDPLPGPQTPSDAGITEGDLLVLF-VAEAPPPPAVFDDVFDTAATDLDTGLR 121 Query 136 FDRTALNRFVGAAIPLLTAPV-------IGMAMRAWWETGR---------SLWWPLAIGI 179 ++ A VG + +G+A R E+G LW A G Sbjct 122 WNEKA-AMIVGLMVLAGATLATAAVALRLGLAPRG--ESGARPAVGAIFAQLW--TAGGA 176 Query 180 LGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAAT 239 L + V G+ V R +SG + L +L A A ALAVPL G++ P A A Sbjct 177 LLLLVGAGTAV-RRMRESGPVPTALAACATVLSAAAGALAVPL--GMDGRYGPPHALLAV 233 Query 240 AVLFLTLMTRGGPRKRHELASFAVITAIAVIAAAAAFGY---GYQDWVPAGGIAFGLFIV 296 +T + R + AV+TA A+ A A G + + A ++ Sbjct 234 VAAAVTAVVALRITGRGAVVHIAVMTAAAIAAPALFAALWLPGRRAALAATVAVIAYVVI 293 Query 297 TNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVR 356 T AA++ +VA++ LP +P GE +D + +P AT A+ P Sbjct 294 TFAARIGASVAKMPLPRVPAAGERIDPIDD-EPPATVAGVGAVAVGLSEEAAAPP----- 347 Query 357 LTERSKLAKQLLIGYVTSGTLILAAGAIAVVV--RGHFFVHSLVVAGLITTVCGFRSRLY 414 R+ A+++ G + + A+ V R H A + C R R + Sbjct 348 ---RTGYAQEVCSGITVGAAVAGSVAALLVDAAAREVPLHHIAFAAVIAVAYC-LRGRTH 403 Query 415 AERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRV- 473 + A A++ A+ G TA + W + W +L + LT+A +A + V R+ Sbjct 404 GDPIQAGAVILGGAAVAIG-TATSLAWG-YGVWPVLGL-LTLAAIAGIAVACGVAAPRIT 460 Query 474 -SPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 SP+ +R EL + IAA P+L W+ VY TVRN+ Sbjct 461 FSPIQRRCAELGEYLTIAAAGPLLGWVWDVYATVRNL 497 >gi|296165447|ref|ZP_06847983.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899187|gb|EFG78657.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=500 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 44/125 (36%), Positives = 61/125 (49%), Gaps = 7/125 (5%) Query 5 AVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPA 64 A A P A A P ++RV++L G DL+LPAAVP+ ++ T ++ L+ A Sbjct 3 ATADKPAATAAETLVPPSSRVSLLVGDNQIDLLLPAAVPLAKLVEPTRDTINRRLKSIGA 62 Query 65 DVLGGFDFTAQGVWAFAR-PGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDV 123 L G G + FAR G L SL GV D LL + + +RY P +E+V Sbjct 63 KELPG------GAFVFARAAGMTMLSGKLSLAAQGVNDAELLAFIPAASAQRYEPNIENV 116 Query 124 IDAIA 128 AIA Sbjct 117 SAAIA 121 >gi|325675482|ref|ZP_08155166.1| hypothetical protein HMPREF0724_12948 [Rhodococcus equi ATCC 33707] gi|325553453|gb|EGD23131.1| hypothetical protein HMPREF0724_12948 [Rhodococcus equi ATCC 33707] Length=489 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/226 (29%), Positives = 106/226 (47%), Gaps = 24/226 (10%) Query 287 GGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAI 346 GG FGL A ++ + +A++ LPP+P PG + LDP +EE P Sbjct 285 GGALFGLVF---APRIAMMLAKLPLPPVPAPGTS------LDP-------TEEDPDDAR- 327 Query 347 IASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI---AVVVRGHFFVHSLVVAGLI 403 S+P+ A + R++ A++ L G V TL+ GA+ A + +A Sbjct 328 --SLPSFAT-VERRAEHARRYLTGLVAGWTLLTVTGALLASAPSASDGIYWPGTSLAVAA 384 Query 404 TTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVV 463 TV FR R Y+ A L++ A+ L + P A L + + + ALV+ Sbjct 385 ATVLMFRGRTYSSAEQAVPLISGGSAVLMLLAVATAVVVPSAALPLFATTALLVVAALVL 444 Query 464 VGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 + R SPV +R E++D A IAA++P+ W++G++ VR + Sbjct 445 GVVVPQ-RTFSPVQRRAAEIVDYAAIAAVVPLACWVSGLFVAVRGL 489 >gi|41409884|ref|NP_962720.1| hypothetical protein MAP3786 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398716|gb|AAS06336.1| hypothetical protein MAP_3786 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460255|gb|EGO39158.1| type VII secretion integral membrane protein EccD [Mycobacterium avium subsp. paratuberculosis S397] Length=480 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 106/415 (26%), Positives = 155/415 (38%), Gaps = 48/415 (11%) Query 24 RVTILTGRRMTDLVLPAAVPMETYIDDT----VAVLSEVLEDTPADVLGGFDFTAQGVWA 79 RV IL R+T++ LPA +P+ + V + + A G + + Sbjct 11 RVAILADSRLTEMALPAELPLREILPAVQRLVVPAAANGDSEDGAPSRGAAEVGGAVQLS 70 Query 80 FARPGSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDES--PEFD 137 A G P LD SLD GVVDG LL L V +VED+ DA + S + Sbjct 71 LAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFSTSRLRPWG 130 Query 138 RTALNRFVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGILGIAVLVGSFVANRFYQS 197 T + RF AA+ + G+++ TG + + +VG R ++ Sbjct 131 TTHIQRFALAAVIAVALLATGLSVSYRVATGALAGLVAVSAVAALTAIVGLLATARSPRT 190 Query 198 GHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPR-KRH 256 G L + + I A ALAVP G QV AA V +L+ P +R Sbjct 191 GM---ALSIAALVPIGAALALAVP-----GRFGPAQVMLAAAGVTAWSLIALMAPSAERE 242 Query 257 ELASFAVITAIAVIAAAAAFGYGYQDW------VPAGGIAFGLFIVTNAAKLTVAVARIA 310 LA F TA+ A A W + G I L + AA L+ AR Sbjct 243 RLAGFFTATAVLGAAVLLAA-GAELLWHITPVALGCGLIVAALLVTVEAAPLSALWARFP 301 Query 311 LPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQLLIG 370 LP IP PG+ P A P E+ P R ++ G Sbjct 302 LPVIPAPGDPT-------PSAPPLPVLEDLP-----------------RRVRIGDAHQSG 337 Query 371 YVTSGTLILAAGAIAVVVRGH-FFVHSLVVAGLITTVCGFRSRLYAERWC-AWAL 423 ++ + L+ G++A+ +R V G R+R++ C AW L Sbjct 338 FIAAAVLLSVLGSVAIALRPETLSAAGWYVVGATAATSVLRARVWDSAACKAWLL 392 >gi|312140880|ref|YP_004008216.1| esx cluster integral membrane protein [Rhodococcus equi 103S] gi|311890219|emb|CBH49537.1| putative esx cluster integral membrane protein [Rhodococcus equi 103S] Length=491 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/226 (29%), Positives = 106/226 (47%), Gaps = 24/226 (10%) Query 287 GGIAFGLFIVTNAAKLTVAVARIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAI 346 GG FGL A ++ + +A++ LPP+P PG + LDP +EE P Sbjct 287 GGALFGLVF---APRIAMMLAKLPLPPVPAPGTS------LDP-------TEEDPDDAR- 329 Query 347 IASVPASAVRLTERSKLAKQLLIGYVTSGTLILAAGAI---AVVVRGHFFVHSLVVAGLI 403 S+P+ A + R++ A++ L G V TL+ GA+ A + +A Sbjct 330 --SLPSFAT-VERRAEHARRYLTGLVAGWTLLTVTGALLASAPSASDGIYWPGTSLAVAA 386 Query 404 TTVCGFRSRLYAERWCAWALLAATVAIPTGLTAKLIIWYPHYAWLLLSVYLTVALVALVV 463 TV FR R Y+ A L++ A+ L + P A L + + + ALV+ Sbjct 387 ATVLMFRGRTYSSAEQAVPLISGGSAVLMLLAVATAVVVPSAALPLFATTALLVVAALVL 446 Query 464 VGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNI 509 + R SPV +R E++D A I+A++P+ W++G++ VR + Sbjct 447 GVVVPQ-RTFSPVQRRAAEIVDYAAISAVVPLACWVSGLFVAVRGL 491 >gi|308369358|ref|ZP_07417469.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308371637|ref|ZP_07425608.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308372854|ref|ZP_07430142.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005] 9 more sequence titles Length=473 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 130/508 (26%), Positives = 204/508 (41%), Gaps = 69/508 (13%) Query 24 RVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFTAQGVWAFARP 83 RV IL R+T++ LPA +P+ + AV V+ G D A + A Sbjct 11 RVAILADSRLTEMALPAELPLREILP---AVQRLVVPSAQNGDGGQADSGAAVQLSLAPV 67 Query 84 GSPPLKLDQSLDDAGVVDGSLLTLVSVSRTERYRPLVEDVIDAIAVLDESPEFDRTALNR 143 G P LD SLD GVVDG LL L V +VED+ DA + F + L Sbjct 68 GGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMI------FSTSRLKP 121 Query 144 FVGAAIPLLTAPVIGMAMRAWWETGRSLWWPLAIGIL-------GIAV---LVGSFVANR 193 + A I + + A TG ++ + +A G+L GIAV L G + R Sbjct 122 WGIAHIQ--RGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIR 179 Query 194 FYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVAGAATAVLFLTLMTRGGPR 253 +SG L + + I A ALAVP G QV A V +L+ P Sbjct 180 SPRSGI---ALSIAALVPIGAALALAVP-----GKFGPAQVLLGAAGVAAWSLIALMIPS 231 Query 254 -KRHELASFAVITAIAVIAAAAAFGYGYQDWVP-----AGGIAFGLFIVTNAAKLTVAVA 307 +R + +F A+ + A A G +P G I L + AA+L+ A Sbjct 232 AERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWA 291 Query 308 RIALPPIPVPGETVDNEELLDPVATPEATSEETPTWQAIIASVPASAVRLTERSKLAKQL 367 R LP IP PG+ P A P E+ P R +++ Sbjct 292 RFPLPVIPAPGDP-------TPSAPPLRLLEDLP-----------------RRVRVSDAH 327 Query 368 LIGYVTSGTLILAAGAIAVVVRGHFFVHSLVVAGLITTVCGFRSRLYAERWCAWALLAAT 427 G++ + L+ G++A+ VR VV + + L A W + A A Sbjct 328 QSGFIAAAVLLSVLGSVAIAVRPEALS---VVGWYLVAATAAAATLRARVWDSAACKAWL 384 Query 428 VAIPTGLTAKLIIWY-------PHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRT 480 +A P + L+++Y + +L+ L +A V + + +A S ++R Sbjct 385 LAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRL 444 Query 481 LELIDGAMIAAIIPMLLWITGVYDTVRN 508 L L+ + ++IP++ ++ G++ V N Sbjct 445 LGLVAAGLDVSLIPVMAYLVGLFAWVLN 472 Lambda K H 0.323 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1110838387732 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40