BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3882c Length=462 Score E Sequences producing significant alignments: (Bits) Value gi|15611018|ref|NP_218399.1| hypothetical protein Rv3882c [Mycob... 935 0.0 gi|253800932|ref|YP_003033934.1| hypothetical protein TBMG_03930... 934 0.0 gi|254366425|ref|ZP_04982469.1| conserved membrane protein [Myco... 934 0.0 gi|289572535|ref|ZP_06452762.1| conserved hypothetical protein [... 933 0.0 gi|294995567|ref|ZP_06801258.1| hypothetical protein Mtub2_13937... 932 0.0 gi|289441324|ref|ZP_06431068.1| conserved membrane protein [Myco... 931 0.0 gi|240168362|ref|ZP_04747021.1| hypothetical protein MkanA1_0355... 793 0.0 gi|183985429|ref|YP_001853720.1| hypothetical protein MMAR_5458 ... 765 0.0 gi|221229373|ref|YP_002502789.1| hypothetical protein MLBr_00042... 695 0.0 gi|15826895|ref|NP_301158.1| hypothetical protein ML0042 [Mycoba... 692 0.0 gi|118468438|ref|YP_884498.1| hypothetical protein MSMEG_0082 [M... 633 2e-179 gi|108797058|ref|YP_637255.1| hypothetical protein Mmcs_0077 [My... 627 1e-177 gi|126432680|ref|YP_001068371.1| hypothetical protein Mjls_0067 ... 626 2e-177 gi|120401119|ref|YP_950948.1| hypothetical protein Mvan_0091 [My... 626 3e-177 gi|315441765|ref|YP_004074644.1| hypothetical protein Mspyr1_007... 619 4e-175 gi|145221351|ref|YP_001132029.1| hypothetical protein Mflv_0756 ... 618 6e-175 gi|289748417|ref|ZP_06507795.1| conserved membrane protein [Myco... 329 7e-88 gi|289756016|ref|ZP_06515394.1| predicted protein [Mycobacterium... 266 4e-69 gi|289756017|ref|ZP_06515395.1| predicted protein [Mycobacterium... 202 1e-49 gi|226365628|ref|YP_002783411.1| hypothetical protein ROP_62190 ... 82.0 2e-13 gi|317506952|ref|ZP_07964721.1| hypothetical protein HMPREF9336_... 80.1 8e-13 gi|296393780|ref|YP_003658664.1| hypothetical protein Srot_1369 ... 78.6 2e-12 gi|145226048|ref|YP_001136702.1| hypothetical protein Mflv_5453 ... 78.6 2e-12 gi|15611021|ref|NP_218402.1| hypothetical protein Rv3885c [Mycob... 71.6 3e-10 gi|289441327|ref|ZP_06431071.1| conserved hypothetical protein [... 71.6 3e-10 gi|308371491|ref|ZP_07667180.1| hypothetical protein TMCG_01396 ... 71.2 3e-10 gi|254366427|ref|ZP_04982471.1| conserved membrane protein [Myco... 71.2 3e-10 gi|326905720|gb|EGE52653.1| conserved membrane protein [Mycobact... 71.2 3e-10 gi|296138073|ref|YP_003645316.1| hypothetical protein Tpau_0334 ... 70.9 5e-10 gi|31795059|ref|NP_857552.1| hypothetical protein Mb3915c [Mycob... 70.5 7e-10 gi|289756020|ref|ZP_06515398.1| conserved hypothetical protein [... 68.6 2e-09 gi|296164032|ref|ZP_06846655.1| conserved hypothetical protein [... 68.2 3e-09 gi|240168365|ref|ZP_04747024.1| hypothetical protein MkanA1_0357... 67.8 3e-09 gi|336457499|gb|EGO36506.1| type VII secretion protein EccE [Myc... 67.4 5e-09 gi|118463849|ref|YP_879453.1| hypothetical protein MAV_0159 [Myc... 67.0 7e-09 gi|226305376|ref|YP_002765334.1| hypothetical protein RER_18870 ... 65.9 1e-08 gi|54022791|ref|YP_117033.1| hypothetical protein nfa8240 [Nocar... 65.1 3e-08 gi|254821875|ref|ZP_05226876.1| hypothetical protein MintA_18217... 63.5 7e-08 gi|296167000|ref|ZP_06849413.1| conserved hypothetical protein [... 63.5 7e-08 gi|15843517|ref|NP_338554.1| hypothetical protein MT4000 [Mycoba... 63.5 8e-08 gi|229489345|ref|ZP_04383208.1| conserved hypothetical protein [... 62.8 1e-07 gi|342860120|ref|ZP_08716772.1| hypothetical protein MCOL_14615 ... 62.4 2e-07 gi|262203185|ref|YP_003274393.1| hypothetical protein Gbro_3296 ... 61.2 3e-07 gi|343926912|ref|ZP_08766405.1| hypothetical protein GOALK_072_0... 55.8 1e-05 gi|333918176|ref|YP_004491757.1| hypothetical protein AS9A_0500 ... 55.8 1e-05 gi|333988688|ref|YP_004521302.1| hypothetical protein JDM601_004... 54.7 3e-05 gi|240169213|ref|ZP_04747872.1| hypothetical protein MkanA1_0786... 54.7 4e-05 gi|300782643|ref|YP_003762934.1| hypothetical protein AMED_0712 ... 53.5 8e-05 gi|333990540|ref|YP_004523154.1| hypothetical protein JDM601_190... 53.5 8e-05 gi|296165445|ref|ZP_06847981.1| conserved hypothetical protein [... 52.8 1e-04 >gi|15611018|ref|NP_218399.1| hypothetical protein Rv3882c [Mycobacterium tuberculosis H37Rv] gi|15843514|ref|NP_338551.1| hypothetical protein MT3997 [Mycobacterium tuberculosis CDC1551] gi|31795056|ref|NP_857549.1| hypothetical protein Mb3912c [Mycobacterium bovis AF2122/97] 56 more sequence titles Length=462 Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/462 (100%), Positives = 462/462 (100%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW Sbjct 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD Sbjct 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN Sbjct 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD Sbjct 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL Sbjct 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD Sbjct 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG Sbjct 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK Sbjct 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 >gi|253800932|ref|YP_003033934.1| hypothetical protein TBMG_03930 [Mycobacterium tuberculosis KZN 1435] gi|289556151|ref|ZP_06445361.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|297636568|ref|ZP_06954348.1| hypothetical protein MtubK4_20685 [Mycobacterium tuberculosis KZN 4207] 6 more sequence titles Length=462 Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/462 (99%), Positives = 462/462 (100%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW Sbjct 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV+VD Sbjct 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVVVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN Sbjct 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD Sbjct 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL Sbjct 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD Sbjct 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG Sbjct 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK Sbjct 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 >gi|254366425|ref|ZP_04982469.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|134151937|gb|EBA43982.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] Length=462 Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/462 (99%), Positives = 461/462 (99%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW Sbjct 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD Sbjct 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN Sbjct 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWIVLRADPERTRKSAQRRDEG AGLARYLVASATRIADRLASHGVDAVCGRSFDDYD Sbjct 181 RRTWIVLRADPERTRKSAQRRDEGAAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL Sbjct 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD Sbjct 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG Sbjct 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK Sbjct 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 >gi|289572535|ref|ZP_06452762.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339633874|ref|YP_004725516.1| hypothetical protein MAF_38970 [Mycobacterium africanum GM041182] gi|289536966|gb|EFD41544.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339333230|emb|CCC28965.1| putative conserved membrane protein [Mycobacterium africanum GM041182] Length=462 Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/462 (99%), Positives = 461/462 (99%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW Sbjct 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD Sbjct 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN Sbjct 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD Sbjct 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL Sbjct 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLV ETVNRCPVYMPFDD Sbjct 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVAETVNRCPVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG Sbjct 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK Sbjct 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 >gi|294995567|ref|ZP_06801258.1| hypothetical protein Mtub2_13937 [Mycobacterium tuberculosis 210] Length=462 Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/462 (99%), Positives = 462/462 (100%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW Sbjct 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD Sbjct 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN Sbjct 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD Sbjct 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL Sbjct 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD Sbjct 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VDIALNLGDAQTFTQFVVR+AAAG+MVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG Sbjct 361 VDIALNLGDAQTFTQFVVRSAAAGSMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK Sbjct 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 >gi|289441324|ref|ZP_06431068.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289572141|ref|ZP_06452368.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289414243|gb|EFD11483.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289545896|gb|EFD49543.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=462 Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/462 (99%), Positives = 461/462 (99%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITG Sbjct 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGG 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD Sbjct 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN Sbjct 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD Sbjct 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL Sbjct 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD Sbjct 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG Sbjct 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK Sbjct 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 >gi|240168362|ref|ZP_04747021.1| hypothetical protein MkanA1_03557 [Mycobacterium kansasii ATCC 12478] Length=465 Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/465 (82%), Positives = 422/465 (91%), Gaps = 3/465 (0%) Query 1 MRNPLG---LRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRI 57 MRNP LRFSTGH L+ +AL PPCI+ FL TRYWWAGIA+ ++ IVATVTF+GRR+ Sbjct 1 MRNPFSPIRLRFSTGHTLVVAALGPPCIMLFLHTRYWWAGIAIVAVATIVATVTFFGRRV 60 Query 58 TGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 TGWVA ++ WLRRRR+PPD SEPVVGATVKPGDHVAVRW+ E L+AVIEL PRPFTPTV Sbjct 61 TGWVATMFVWLRRRRKPPDVPSEPVVGATVKPGDHVAVRWRRECLIAVIELKPRPFTPTV 120 Query 118 IVDGQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPA 177 IVDGQAHTDD+LDT L+EELL+VHCPDLEAD+VSAGYRVGNTA+PDVV+LYQ+VIG DPA Sbjct 121 IVDGQAHTDDVLDTRLLEELLAVHCPDLEADVVSAGYRVGNTASPDVVNLYQRVIGADPA 180 Query 178 PANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFD 237 PANRRTWI+LRA+PERT KSAQRRD GVAGLARYLVASATRIAD LAS+GVDAVCGRSFD Sbjct 181 PANRRTWIMLRANPERTHKSAQRRDAGVAGLARYLVASATRIADSLASNGVDAVCGRSFD 240 Query 238 DYDHATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQST 297 DYDHA DIGFVREKWSMIKGRDAYTAAY APGGPD+WWSARADH +TRVR+APGM PQST Sbjct 241 DYDHAIDIGFVREKWSMIKGRDAYTAAYTAPGGPDLWWSARADHIVTRVRIAPGMPPQST 300 Query 298 VLLTTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMP 357 VLLTT KPKTPRGF+RL+GGQRPALQGQ+LV N HCQLPIGSAGVLVG+TVNR PVYMP Sbjct 301 VLLTTVGKPKTPRGFSRLYGGQRPALQGQNLVPNHHCQLPIGSAGVLVGQTVNRYPVYMP 360 Query 358 FDDVDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATT 417 FDDVD+++NLGDAQTFTQF VR+AAAG +VTVGP FE+FA LIGAHIG K+AWPNATT Sbjct 361 FDDVDVSINLGDAQTFTQFAVRSAAAGGIVTVGPHFEQFAGLIGAHIGPVAKIAWPNATT 420 Query 418 YLGPHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 YLGPH G+D+V+LRHN+I TPRHR+LPIRRVSPPEESRYQMALP+ Sbjct 421 YLGPHSGVDKVVLRHNLISTPRHRELPIRRVSPPEESRYQMALPR 465 >gi|183985429|ref|YP_001853720.1| hypothetical protein MMAR_5458 [Mycobacterium marinum M] gi|183178755|gb|ACC43865.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=465 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/465 (82%), Positives = 418/465 (90%), Gaps = 3/465 (0%) Query 1 MRNPLG---LRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRI 57 MRNP R STGH L+ + LAPPCI+ FL RYWW GIAL +LGVIVATVTF GRR+ Sbjct 1 MRNPFSSIRFRVSTGHTLVVAVLAPPCIMMFLHMRYWWVGIALVALGVIVATVTFSGRRV 60 Query 58 TGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 TGWVA V+AWLRRRRRPPD SEPVVGATVKPGDHVAVRW+ + L+AVIEL PRPFTPTV Sbjct 61 TGWVATVFAWLRRRRRPPDVPSEPVVGATVKPGDHVAVRWRRDHLIAVIELKPRPFTPTV 120 Query 118 IVDGQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPA 177 IVDG+AHTDD+LDT L+E+LLSVHCPDLEAD+VSAGYRVGNTA+ +VVSLYQ+VIG DPA Sbjct 121 IVDGKAHTDDVLDTRLLEDLLSVHCPDLEADVVSAGYRVGNTASEEVVSLYQRVIGADPA 180 Query 178 PANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFD 237 PANRRTWI+LRADPE+TRKSAQRR+ G+AGLARYLVASATRIAD LAS+GVDAVCGRSFD Sbjct 181 PANRRTWIMLRADPEQTRKSAQRREAGLAGLARYLVASATRIADGLASNGVDAVCGRSFD 240 Query 238 DYDHATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQST 297 DYD ATDIG+VREKWSMIKG D+YTAAY APGGPD+WWSARADHTITRVR+APGM P+ST Sbjct 241 DYDRATDIGYVREKWSMIKGADSYTAAYTAPGGPDLWWSARADHTITRVRIAPGMPPRST 300 Query 298 VLLTTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMP 357 VLLTT KPKTPRGF+RLFG QRPAL+GQ LVAN HCQLPIGSAGVL+GETVNR PVYMP Sbjct 301 VLLTTVGKPKTPRGFSRLFGSQRPALEGQTLVANHHCQLPIGSAGVLIGETVNRRPVYMP 360 Query 358 FDDVDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATT 417 FDDVD +NLGDAQTFTQF VR+AAAG +VTVGP FE+FA LIGAH+G E KV WPNATT Sbjct 361 FDDVDATVNLGDAQTFTQFAVRSAAAGGVVTVGPHFEQFAGLIGAHVGAEAKVVWPNATT 420 Query 418 YLGPHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 YLG HPGIDRVILRHN++GTPRHR+LPIRRVSPPEESR+QMALPK Sbjct 421 YLGAHPGIDRVILRHNLVGTPRHRKLPIRRVSPPEESRFQMALPK 465 >gi|221229373|ref|YP_002502789.1| hypothetical protein MLBr_00042 [Mycobacterium leprae Br4923] gi|219932480|emb|CAR70135.1| putative membrane protein [Mycobacterium leprae Br4923] Length=467 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/462 (73%), Positives = 392/462 (85%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNP+ LRFS G ALL +AL PPCII F T+YWWAGIAL L VI+ V F GR ++GW Sbjct 1 MRNPVWLRFSMGRALLVTALVPPCIILFFHTQYWWAGIALVVLVVILTLVEFSGRWLSGW 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 + A+Y++ RR +P D+ SEPV+GATVKP D V +RWQ FLV+V+ELIPRPFTPTVIVD Sbjct 61 LMALYSFFRRSSKPLDTPSEPVIGATVKPADQVIMRWQDGFLVSVVELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 G+A TDD+L+T L+E LLSVHCPDLEA +VSAGYRVG+ A+ DVV+LYQQVIG DPAPA+ Sbjct 121 GEAQTDDLLETQLLEHLLSVHCPDLEAVVVSAGYRVGHVASLDVVNLYQQVIGADPAPAH 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWI+LRADP RTRKSAQRRD GVAGLARYL+AS TRIAD+LASHGVDAVCG SF+ D Sbjct 181 RRTWIMLRADPVRTRKSAQRRDAGVAGLARYLIASTTRIADQLASHGVDAVCGHSFESVD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATD+GF++EKWSM++G++AY+ AY AP GPD WWSARADHTITRVRVAPG PQ+TV+L Sbjct 241 HATDVGFMQEKWSMMRGQNAYSVAYTAPAGPDAWWSARADHTITRVRVAPGKTPQATVVL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TT KPKTP GF RL G Q+PAL G+ VA +HCQ+PIGSAGVLVGETVNRC VYMPFDD Sbjct 301 TTLGKPKTPCGFYRLHGAQQPALLGRSFVAYQHCQMPIGSAGVLVGETVNRCSVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VD++++LGD QTFTQFVVRAAAAG +VT+G QFE+FAR+IG IG KVAWPNATTYL Sbjct 361 VDVSVSLGDVQTFTQFVVRAAAAGGIVTLGQQFEKFARMIGGQIGSVAKVAWPNATTYLD 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 P+PG +RVIL+H++IGTPRHR+LPIRR+SPPEE YQM LPK Sbjct 421 PYPGSERVILKHDIIGTPRHRKLPIRRISPPEEGHYQMVLPK 462 >gi|15826895|ref|NP_301158.1| hypothetical protein ML0042 [Mycobacterium leprae TN] gi|2370273|emb|CAA75194.1| hypothetical protein [Mycobacterium leprae] gi|13092442|emb|CAC29550.1| putative membrane protein [Mycobacterium leprae] Length=467 Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/462 (73%), Positives = 391/462 (85%), Gaps = 0/462 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNP+ LRFS G ALL +AL PPCII F T+YWWAGIAL L VI+ V F GR ++GW Sbjct 1 MRNPVWLRFSMGRALLVTALVPPCIILFFHTQYWWAGIALVVLVVILTLVEFSGRWLSGW 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 + A+Y++ RR +P D+ SEPV+GATVKP D V +RWQ FLV+V+ELIPRPFTPTVIVD Sbjct 61 LMALYSFFRRSSKPLDTPSEPVIGATVKPADQVIMRWQDGFLVSVVELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 G+A TDD+L+T L+E LLSVHCPDLEA +VSAGYRVG+ A+ DVV+LYQQVIG DPAPA+ Sbjct 121 GEAQTDDLLETQLLEHLLSVHCPDLEAVVVSAGYRVGHVASLDVVNLYQQVIGADPAPAH 180 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYD 240 RRTWI+LRADP RTRKSAQRRD GVAGLARYL+AS TRIAD+LASHGVDAVCG SF+ D Sbjct 181 RRTWIMLRADPVRTRKSAQRRDAGVAGLARYLIASTTRIADQLASHGVDAVCGHSFESVD 240 Query 241 HATDIGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLL 300 HATD+GF++EKWSM++G++AY+ AY AP GPD WWSARADHTITRV VAPG PQ+TV+L Sbjct 241 HATDVGFMQEKWSMMRGQNAYSVAYTAPAGPDAWWSARADHTITRVWVAPGKTPQATVVL 300 Query 301 TTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD 360 TT KPKTP GF RL G Q+PAL G+ VA +HCQ+PIGSAGVLVGETVNRC VYMPFDD Sbjct 301 TTLGKPKTPCGFYRLHGAQQPALLGRSFVAYQHCQMPIGSAGVLVGETVNRCSVYMPFDD 360 Query 361 VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLG 420 VD++++LGD QTFTQFVVRAAAAG +VT+G QFE+FAR+IG IG KVAWPNATTYL Sbjct 361 VDVSVSLGDVQTFTQFVVRAAAAGGIVTLGQQFEKFARMIGGQIGSVAKVAWPNATTYLD 420 Query 421 PHPGIDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 P+PG +RVIL+H++IGTPRHR+LPIRR+SPPEE YQM LPK Sbjct 421 PYPGSERVILKHDIIGTPRHRKLPIRRISPPEEGHYQMVLPK 462 >gi|118468438|ref|YP_884498.1| hypothetical protein MSMEG_0082 [Mycobacterium smegmatis str. MC2 155] gi|118169725|gb|ABK70621.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=464 Score = 633 bits (1633), Expect = 2e-179, Method: Compositional matrix adjust. Identities = 304/458 (67%), Positives = 367/458 (81%), Gaps = 0/458 (0%) Query 5 LGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAV 64 G RF+TGH + A+ L P CI + W GI L +L + + +T G RITGWV A+ Sbjct 7 FGFRFTTGHGIWAATLIPACIAICMHFDLLWLGITLGALIALFSVLTIRGLRITGWVRAI 66 Query 65 YAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAH 124 ++W RR R PD +SEP VG+TV PGDHVAVRWQG++L+AVIEL+PRPFTPTVIV+G A Sbjct 67 FSWRRRHRSTPDIASEPAVGSTVMPGDHVAVRWQGDYLIAVIELVPRPFTPTVIVNGSAM 126 Query 125 TDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTW 184 TDD+++T LVE LL HCPDLEAD+VSAGYRVG TA +++LY+QV+G PAPANRRTW Sbjct 127 TDDVVNTKLVERLLEAHCPDLEADVVSAGYRVGKTAPASLIALYEQVVGPYPAPANRRTW 186 Query 185 IVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYDHATD 244 IVLRADPE+T++SA RRD GV+GLARYLVASATRIAD+LAS+GVDA C RSFDDY+ AT+ Sbjct 187 IVLRADPEKTQRSAHRRDSGVSGLARYLVASATRIADQLASNGVDARCCRSFDDYEKATE 246 Query 245 IGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLLTTAD 304 I + RE WS IKGR +TAAY APGGPD+WWSARADHTITRVRV PG AP S +LLTT Sbjct 247 ISYERETWSSIKGRSTFTAAYTAPGGPDMWWSARADHTITRVRVRPGAAPSSAILLTTLA 306 Query 305 KPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDDVDIA 364 P TPRGF+ LFGGQR ALQG V+++H LPIGSAGVLVGET +R PVYMPFD+VD++ Sbjct 307 NPTTPRGFSCLFGGQRAALQGIVPVSDKHYDLPIGSAGVLVGETADRYPVYMPFDNVDVS 366 Query 365 LNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLGPHPG 424 +NLGDA+ FTQFV+R+AAAGA+VT+GPQF EFA +I +G+ ++ WPNATTYLGPH G Sbjct 367 INLGDARLFTQFVIRSAAAGAVVTLGPQFREFATMINGRVGRTPRIGWPNATTYLGPHQG 426 Query 425 IDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 + RVILR N I TPRHRQLPI+ ++P EESRYQMAL + Sbjct 427 VGRVILRPNFIDTPRHRQLPIQLINPREESRYQMALEQ 464 >gi|108797058|ref|YP_637255.1| hypothetical protein Mmcs_0077 [Mycobacterium sp. MCS] gi|119866143|ref|YP_936095.1| hypothetical protein Mkms_0086 [Mycobacterium sp. KMS] gi|108767477|gb|ABG06199.1| putative conserved membrane protein [Mycobacterium sp. MCS] gi|119692232|gb|ABL89305.1| putative conserved membrane protein [Mycobacterium sp. KMS] Length=465 Score = 627 bits (1618), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 304/458 (67%), Positives = 371/458 (82%), Gaps = 0/458 (0%) Query 5 LGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAV 64 GLR +TGH + A+ L P CI F+ W G+ ++ L ++A VT GRR+TGWVAA+ Sbjct 8 FGLRLTTGHLMWAAVLIPACIAIFVPLDLLWVGVTVSVLIALIAVVTVRGRRLTGWVAAL 67 Query 65 YAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAH 124 ++W RR P + SEP VG+TV PGDHVAVRWQG+ L++ IEL+PRPFTPTV+V+GQ+ Sbjct 68 FSWRRRHLSTPPAPSEPAVGSTVMPGDHVAVRWQGDHLMSAIELVPRPFTPTVVVNGQSF 127 Query 125 TDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTW 184 TDD+LDT LVE L++ HCP+LEAD+V+AGYRVG TA +V+LY+QV+G PAPANRRTW Sbjct 128 TDDVLDTALVENLIAAHCPELEADVVAAGYRVGKTAPASLVALYEQVVGPYPAPANRRTW 187 Query 185 IVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYDHATD 244 IVLRADPE TRK AQRRD GVAGLARYLVAS TR+AD+LA +G+DA RSFDD+D AT+ Sbjct 188 IVLRADPELTRKPAQRRDSGVAGLARYLVASTTRLADQLAGNGIDARPSRSFDDFDRATE 247 Query 245 IGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLLTTAD 304 + F RE WS IKGR +TAAY+APGGPDVWWSARADHTITR+R+ PG+AP +TVLLTT Sbjct 248 VSFERETWSAIKGRSTFTAAYSAPGGPDVWWSARADHTITRMRIRPGIAPTTTVLLTTLA 307 Query 305 KPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDDVDIA 364 P TPRGF+ LFGGQR ALQG V+++H +LPIGSAG+L+GET +R PVYMPFDDVD++ Sbjct 308 NPATPRGFSCLFGGQRAALQGISPVSDKHYELPIGSAGILIGETADRYPVYMPFDDVDVS 367 Query 365 LNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLGPHPG 424 +NLGDA+ FTQFVVR+AAAGA+VT+GPQF EFA + IGQE K++WPNATTYL PHPG Sbjct 368 INLGDARLFTQFVVRSAAAGAVVTLGPQFREFAGFVNGRIGQEAKLSWPNATTYLSPHPG 427 Query 425 IDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 + RVILRHN I TPRHRQLPIR ++P EESRYQMAL + Sbjct 428 VGRVILRHNFIDTPRHRQLPIRLINPREESRYQMALEQ 465 >gi|126432680|ref|YP_001068371.1| hypothetical protein Mjls_0067 [Mycobacterium sp. JLS] gi|126232480|gb|ABN95880.1| putative conserved membrane protein [Mycobacterium sp. JLS] Length=465 Score = 626 bits (1615), Expect = 2e-177, Method: Compositional matrix adjust. Identities = 303/458 (67%), Positives = 371/458 (82%), Gaps = 0/458 (0%) Query 5 LGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAV 64 GLR +TGH + A+ L P CI F+ W G+ ++ L ++A VT GRR+TGWVAA+ Sbjct 8 FGLRLTTGHLMWAAVLIPACIAIFVPLDLLWVGVTVSVLIALIAVVTVRGRRLTGWVAAL 67 Query 65 YAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAH 124 ++W RR P + SEP VG+TV PGDHVAVRWQG+ L++ IEL+PRPFTPTV+V+GQ+ Sbjct 68 FSWRRRHLSTPPAPSEPAVGSTVMPGDHVAVRWQGDHLMSAIELVPRPFTPTVVVNGQSF 127 Query 125 TDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTW 184 TDD+LDT +VE L++ HCP+LEAD+V+AGYRVG TA +V+LY+QV+G PAPANRRTW Sbjct 128 TDDVLDTAMVENLIAAHCPELEADVVAAGYRVGKTAPASLVALYEQVVGPYPAPANRRTW 187 Query 185 IVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYDHATD 244 IVLRADPE TRK AQRRD GVAGLARYLVAS TR+AD+LA +G+DA RSFDD+D AT+ Sbjct 188 IVLRADPELTRKPAQRRDSGVAGLARYLVASTTRLADQLAGNGIDARPSRSFDDFDRATE 247 Query 245 IGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLLTTAD 304 + F RE WS IKGR +TAAY+APGGPDVWWSARADHTITR+R+ PG+AP +TVLLTT Sbjct 248 VSFERETWSAIKGRSTFTAAYSAPGGPDVWWSARADHTITRMRIRPGIAPTTTVLLTTLA 307 Query 305 KPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDDVDIA 364 P TPRGF+ LFGGQR ALQG V+++H +LPIGSAG+L+GET +R PVYMPFDDVD++ Sbjct 308 NPATPRGFSCLFGGQRAALQGISPVSDKHYELPIGSAGILIGETADRYPVYMPFDDVDVS 367 Query 365 LNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLGPHPG 424 +NLGDA+ FTQFVVR+AAAGA+VT+GPQF EFA + IGQE K++WPNATTYL PHPG Sbjct 368 INLGDARLFTQFVVRSAAAGAVVTLGPQFREFAGFVNGRIGQEAKLSWPNATTYLSPHPG 427 Query 425 IDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMALPK 462 + RVILRHN I TPRHRQLPIR ++P EESRYQMAL + Sbjct 428 VGRVILRHNFIDTPRHRQLPIRLINPREESRYQMALEQ 465 >gi|120401119|ref|YP_950948.1| hypothetical protein Mvan_0091 [Mycobacterium vanbaalenii PYR-1] gi|119953937|gb|ABM10942.1| putative conserved membrane protein [Mycobacterium vanbaalenii PYR-1] Length=465 Score = 626 bits (1614), Expect = 3e-177, Method: Compositional matrix adjust. Identities = 311/456 (69%), Positives = 373/456 (82%), Gaps = 0/456 (0%) Query 5 LGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAV 64 GLRF+TGHAL A+AL P CI+ F W GI L L + + VT GRR+TGWVAA+ Sbjct 8 FGLRFTTGHALWAAALIPACILVFARLELLWLGITLGVLIGLASVVTIRGRRLTGWVAAL 67 Query 65 YAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAH 124 +AW RR R+PP + SEP VGATV PGDHVA+RWQ ++LV+VIEL+PRPFTPTVIV+G+A Sbjct 68 FAWRRRHRQPPPTPSEPAVGATVIPGDHVALRWQDDYLVSVIELVPRPFTPTVIVNGEAF 127 Query 125 TDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTW 184 TDD+++T LVE+LL+ +CPDLEADIVSAGYRVG TA +V+LY+QV+G PAPA+RRTW Sbjct 128 TDDVVETRLVEDLLTAYCPDLEADIVSAGYRVGKTAPAALVALYEQVVGPYPAPASRRTW 187 Query 185 IVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYDHATD 244 IVLRADP++TRKSA RR+EGVAGLA+YLV+S TRIAD LAS GVDA RSFDD+D AT+ Sbjct 188 IVLRADPDKTRKSALRRNEGVAGLAQYLVSSTTRIADHLASKGVDARPARSFDDFDRATE 247 Query 245 IGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLLTTAD 304 I F RE WSM+KGR +TAAY APGGPDVWWSARADHT+TR+R+ PG AP +TVLLTT Sbjct 248 ISFERETWSMVKGRSTFTAAYHAPGGPDVWWSARADHTLTRMRIVPGSAPTTTVLLTTLA 307 Query 305 KPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDDVDIA 364 P TPRGF+ LFGGQR AL G++ V +RH +LPIGSAGVLVGET +R PVYMPFDDVD++ Sbjct 308 NPSTPRGFSCLFGGQRAALLGENPVTDRHYELPIGSAGVLVGETADRYPVYMPFDDVDVS 367 Query 365 LNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLGPHPG 424 +NLG+A+ FTQFVVR+AAAGA VT+ PQFEEFA + A IGQ KVAWP+ATTYL PHPG Sbjct 368 INLGNARLFTQFVVRSAAAGAAVTLQPQFEEFAGFVNARIGQVAKVAWPHATTYLRPHPG 427 Query 425 IDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMAL 460 + RV+LR + I TPRH+QLPIR ++P EESRYQM L Sbjct 428 VGRVMLRDDFIATPRHKQLPIRLINPREESRYQMVL 463 >gi|315441765|ref|YP_004074644.1| hypothetical protein Mspyr1_00750 [Mycobacterium sp. Spyr1] gi|315260068|gb|ADT96809.1| hypothetical protein Mspyr1_00750 [Mycobacterium sp. Spyr1] Length=465 Score = 619 bits (1596), Expect = 4e-175, Method: Compositional matrix adjust. Identities = 302/456 (67%), Positives = 365/456 (81%), Gaps = 0/456 (0%) Query 5 LGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAV 64 G+RF+TGHAL A+ L P CI+ F + W GI LA L + A VT GRRITGW+AA+ Sbjct 8 FGVRFTTGHALWAAVLVPACILIFAQLNLLWLGITLAVLIALCALVTIRGRRITGWIAAL 67 Query 65 YAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAH 124 +AW RR R+PP + SEP VGATV PGDHVA+RWQ +LV+ IELIPRPFTPTVIV+G+A Sbjct 68 FAWRRRHRQPPPAPSEPAVGATVVPGDHVALRWQHGYLVSAIELIPRPFTPTVIVNGEAF 127 Query 125 TDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTW 184 TDD++D+ +E+LL+ +CPDLEADIVSAGYRVG TA +V LY+QV+G PAPA RRTW Sbjct 128 TDDVIDSRQLEKLLAAYCPDLEADIVSAGYRVGRTAPAALVGLYEQVVGPYPAPARRRTW 187 Query 185 IVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYDHATD 244 IVLRADP++TRKSA RRD GV+GLA+Y+V+S TRIAD LAS+G+DA RSFDD+D AT+ Sbjct 188 IVLRADPDKTRKSALRRDVGVSGLAQYVVSSTTRIADHLASNGIDARPARSFDDFDGATE 247 Query 245 IGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLLTTAD 304 I F RE WSM+KGR +TAAY APGGPDVWWSARAD+T+TRVR+ PG AP +TVLLTT Sbjct 248 ISFERETWSMVKGRSTFTAAYHAPGGPDVWWSARADYTLTRVRIVPGAAPTATVLLTTLA 307 Query 305 KPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDDVDIA 364 P TPRGF+ L+GGQR AL G+ V +RH +LPIGSAGVLVGET +R PVYMPFDD D++ Sbjct 308 NPSTPRGFSCLYGGQRAALLGESPVTDRHYELPIGSAGVLVGETADRYPVYMPFDDTDVS 367 Query 365 LNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLGPHPG 424 +NLG+A+ FTQFVVR+AAAGA VT+ PQF EFA + A IG KVAWP+ATTYL P PG Sbjct 368 INLGNARLFTQFVVRSAAAGANVTLQPQFGEFAGFVNAQIGPTAKVAWPHATTYLRPQPG 427 Query 425 IDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMAL 460 + RV+LR N I TPRH++LPIR ++P EESRYQMAL Sbjct 428 VGRVVLRDNFIATPRHKELPIRLINPREESRYQMAL 463 >gi|145221351|ref|YP_001132029.1| hypothetical protein Mflv_0756 [Mycobacterium gilvum PYR-GCK] gi|145213837|gb|ABP43241.1| putative conserved membrane protein [Mycobacterium gilvum PYR-GCK] Length=465 Score = 618 bits (1594), Expect = 6e-175, Method: Compositional matrix adjust. Identities = 302/456 (67%), Positives = 365/456 (81%), Gaps = 0/456 (0%) Query 5 LGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAV 64 G+RF+TGHAL A+ L P CI+ F + W GI LA L + A VT GRRITGW+AA+ Sbjct 8 FGVRFTTGHALWAAVLVPACILIFAQLNLLWLGITLAVLIALCALVTIRGRRITGWIAAL 67 Query 65 YAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAH 124 +AW RR R+PP + SEP VGATV PGDHVA+RWQ +LV+ IELIPRPFTPTVIV+G+A Sbjct 68 FAWRRRHRQPPPAPSEPAVGATVVPGDHVALRWQHGYLVSAIELIPRPFTPTVIVNGEAF 127 Query 125 TDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTW 184 TDD++D+ +E+LL+ +CPDLEADIVSAGYRVG TA +V LY+QV+G PAPA RRTW Sbjct 128 TDDVIDSRQLEKLLAAYCPDLEADIVSAGYRVGRTAPAALVGLYEQVVGPYPAPARRRTW 187 Query 185 IVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFDDYDHATD 244 IVLRADP++TRKSA RRD GV+GLA+Y+V+S TRIAD LAS+G+DA RSFDD+D AT+ Sbjct 188 IVLRADPDKTRKSALRRDVGVSGLAQYVVSSTTRIADHLASNGIDARPARSFDDFDGATE 247 Query 245 IGFVREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLLTTAD 304 I F RE WSM+KGR +TAAY APGGPDVWWSARAD+T+TRVR+ PG AP +TVLLTT Sbjct 248 ISFERETWSMVKGRSTFTAAYHAPGGPDVWWSARADYTLTRVRIVPGAAPTATVLLTTLA 307 Query 305 KPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDDVDIA 364 P TPRGF+ L+GGQR AL G+ V +RH +LPIGSAGVLVGET +R PVYMPFDD D++ Sbjct 308 NPSTPRGFSCLYGGQRAALLGESPVTDRHYELPIGSAGVLVGETADRYPVYMPFDDTDVS 367 Query 365 LNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKVAWPNATTYLGPHPG 424 +NLG+A+ FTQFVVR+AAAGA VT+ PQF EFA + A IG KVAWP+ATTYL P PG Sbjct 368 INLGNARLFTQFVVRSAAAGANVTLQPQFGEFAGYVNAQIGPTAKVAWPHATTYLRPQPG 427 Query 425 IDRVILRHNVIGTPRHRQLPIRRVSPPEESRYQMAL 460 + RV+LR N I TPRH++LPIR ++P EESRYQMAL Sbjct 428 VGRVVLRDNFIATPRHKELPIRLINPREESRYQMAL 463 >gi|289748417|ref|ZP_06507795.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289689004|gb|EFD56433.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=202 Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 165/167 (99%), Positives = 165/167 (99%), Gaps = 0/167 (0%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVA VTFYGRRITG Sbjct 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYWWAGIALASLGVIVAMVTFYGRRITGG 60 Query 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD Sbjct 61 VAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVD 120 Query 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSL 167 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSL Sbjct 121 GQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSL 167 >gi|289756016|ref|ZP_06515394.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289696603|gb|EFD64032.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=153 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 130/133 (98%), Positives = 130/133 (98%), Gaps = 0/133 (0%) Query 291 GMAPQSTVLLTTADKPKTPRGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVN 350 G PQSTVLLTTADKPKTPRGFARLF GQRPALQGQHLVANRHCQLPIGSAGVLVGETVN Sbjct 19 GWPPQSTVLLTTADKPKTPRGFARLFCGQRPALQGQHLVANRHCQLPIGSAGVLVGETVN 78 Query 351 RCPVYMPFDDVDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKV 410 RCPVYMPFDDVDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKV Sbjct 79 RCPVYMPFDDVDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQFEEFARLIGAHIGQEVKV 138 Query 411 AWPNATTYLGPHP 423 AWPNATTYLGPHP Sbjct 139 AWPNATTYLGPHP 151 >gi|289756017|ref|ZP_06515395.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289696604|gb|EFD64033.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=110 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/105 (96%), Positives = 101/105 (97%), Gaps = 0/105 (0%) Query 98 QGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVG 157 + F VAVIELIPRPFT TVIVDGQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVG Sbjct 6 KASFWVAVIELIPRPFTRTVIVDGQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVG 65 Query 158 NTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRD 202 NTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRD Sbjct 66 NTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRD 110 >gi|226365628|ref|YP_002783411.1| hypothetical protein ROP_62190 [Rhodococcus opacus B4] gi|226244118|dbj|BAH54466.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=549 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/235 (33%), Positives = 102/235 (44%), Gaps = 16/235 (6%) Query 2 RNPLGLRFSTGHALLASALA-PPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGW 60 R P LRFS ++A L ++A L WW LA + V+ A V R+ GW Sbjct 8 RRPSSLRFSATEVIIAQLLGVTGGVVASLCGLVWWGAATLALVLVVGALV-----RVGGW 62 Query 61 VAAVYAWLR---RRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 + W R R P + VG G V +RW G +VAV+E++P + T Sbjct 63 SS--LDWARTYWRYCTEPGRTESRTVGFQAPTGQSVGLRWDGGNVVAVVEVLPPAGSLTQ 120 Query 118 IVDGQAHTDDMLDTGLVEELLSVHCPDLEA-DIVSAGYR-VGNTAAPDVVSLYQQVIGTD 175 I T L T + L H L DIVS GYR T A DV Y +++G Sbjct 121 ITRDGFQTTHELPTDALAACLVQHDISLTGIDIVSHGYRAAAGTPATDV---YDRLVGPL 177 Query 176 PAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA 230 PA A R W+ LR D + + RR G G +R + +A R+ LA G A Sbjct 178 PATATRMVWLALRFDATESVAAVARRGGGEDGASRAITIAAGRVVRALADSGCRA 232 >gi|317506952|ref|ZP_07964721.1| hypothetical protein HMPREF9336_01092 [Segniliparus rugosus ATCC BAA-974] gi|316254710|gb|EFV14011.1| hypothetical protein HMPREF9336_01092 [Segniliparus rugosus ATCC BAA-974] Length=636 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 84/349 (25%), Positives = 144/349 (42%), Gaps = 50/349 (14%) Query 35 WAGIALASLGVIVATVTFYGRRITGWVAAVYAWLRRRRRPPDSSSEP-----VVGATVKP 89 WA IA+ S+ ++ + G+ +T + A+L R+ P P + + Sbjct 75 WAAIAVPSVLALLLILRIRGKSLTVRIGTFCAYLWRKMVKPSKKLGPEHIPNAFDVSGEG 134 Query 90 GDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDM--LDTGLVEELLSVHCPDLEA 147 G RW + L++V+ + PRP+ T + TDD+ LDT L L L+ Sbjct 135 GALFGFRWDDDLLISVLHVTPRPYEATTLTPRDIQTDDIVSLDT-LAASLNQYKDIVLDG 193 Query 148 -DIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVA 206 D++S G+R N A +Y+ ++G PA A R W+VLR +P ++ ++R G Sbjct 194 IDVISHGWRAPNNAP--YTQVYESILGKLPAIAYRSVWVVLRLNPLNCPEAIEKRGGGPE 251 Query 207 GLARYLVASATRIADRLASHG----------VDAVCGR-----SFDDYDHATDIGFVREK 251 G+ + ++++ +R+A RL G ++ GR FDD + E Sbjct 252 GVLKTMISATSRVAHRLRESGQRVHILNAAQMNTAIGRLSEGLRFDD---------MTES 302 Query 252 WSMIKGRD--AYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQSTVLLTTADKPKTP 309 W IKG +T +P SA + +T++ P T+ L D Sbjct 303 WKEIKGGQYRHFTTFQISP-------SAFSRAGLTQLWTVPSNLTTVTLRLRPVDAHTDV 355 Query 310 RGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCPVYMPF 358 R + ++ G R +L P+ + L GE + +PF Sbjct 356 RDYVQISGFVR------YLTPKELSAPPLPTLARLSGEQLKGFLASLPF 398 >gi|296393780|ref|YP_003658664.1| hypothetical protein Srot_1369 [Segniliparus rotundus DSM 44985] gi|296180927|gb|ADG97833.1| hypothetical protein Srot_1369 [Segniliparus rotundus DSM 44985] Length=733 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/286 (25%), Positives = 126/286 (45%), Gaps = 42/286 (14%) Query 35 WAGIALASLGVIVATVTFYGRRITGWVAAVYAWLRRRRRPPDSSSEP-----VVGATVKP 89 WA IA+ ++ ++ + G+ +T + + ++L R+ P+ P + + Sbjct 89 WAVIAVPAVLGLLLILRVRGKSLTTRIGTLTSYLWRKMAKPNKKLGPDHIPHAFDVSGEG 148 Query 90 GDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDM--LDTGLVEELLSVHCPDLEA 147 G RW + L++V+ + PRP+ T + TDD+ LDT L L L+ Sbjct 149 GALFGFRWDDDLLISVLHITPRPYEATTLTPRDIQTDDIVSLDT-LAASLNQYKDIVLDG 207 Query 148 -DIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVA 206 D++S G+R N A +Y+ ++G PA A R W+VLR +P ++ ++R G Sbjct 208 IDVISHGWRAPNNAP--YTQVYESILGKLPAIAYRSVWVVLRLNPLHCTEAIEKRGGGPE 265 Query 207 GLARYLVASATRIADRLASHG----------VDAVCGR-----SFDDYDHATDIGFVREK 251 G+ + ++++ +R+A RL G ++ GR FDD + E Sbjct 266 GVLKTMMSATSRVAHRLRESGQRVNILSAAQMNTAIGRLSEGLRFDD---------MTES 316 Query 252 WSMIKGRD--AYTAAYAAP-----GGPDVWWSARADHTITRVRVAP 290 W I+G +T +P G W+ ++ T +R+ P Sbjct 317 WKEIQGGQYRHFTTFQISPAAFSRAGLTQLWTVPSNLTTVTLRLRP 362 >gi|145226048|ref|YP_001136702.1| hypothetical protein Mflv_5453 [Mycobacterium gilvum PYR-GCK] gi|145218511|gb|ABP47914.1| hypothetical protein Mflv_5453 [Mycobacterium gilvum PYR-GCK] Length=702 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/267 (29%), Positives = 118/267 (45%), Gaps = 21/267 (7%) Query 90 GDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDLEA-D 148 G + V + E L ++EL P P P+V+ D + T + + ++ E+++V +L++ D Sbjct 106 GVPIGVVSENETLTMMVELRPDPIAPSVVTDTEERTINTISIAMLTEMMNVLDVELDSID 165 Query 149 IVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGL 208 ++ G+R A LYQQ+ G PA A R WIVLR + RR + Sbjct 166 LLGDGFR----AVGGFSDLYQQMTGPTPAAAARSNWIVLRMRLYENLAAIDRRGRDIESA 221 Query 209 ARYLVASATRIADRLASHGVDAV--CGRSFDDYDHAT-DIGFVREKWSMIKGRDAYTAA- 264 R + R AD LA+ G+DAV D + A D + WS ++ R Y + Sbjct 222 HRVAATTCLRAADMLAAKGIDAVPASAAQIDAVNAALHDDTPTVDHWSHMESRQGYASVY 281 Query 265 YAAPGGPDV----WWS---ARADHTITRVRVAPGMAPQSTVLL--TTADKPKTP--RGFA 313 YA P V WW+ A+ T+ R+ A G L+ TA +P P Sbjct 282 YADPAHISVDSPQWWTWTLAQRTSTLIRLSRAGGDTVNIAALVRYRTAARPTAPPVSRLG 341 Query 314 RLFGGQRPALQGQHLVANRHCQLPIGS 340 L+G Q PA+ Q + + PI S Sbjct 342 PLYGVQ-PAMWRQFRIGYLPFEAPIPS 367 >gi|15611021|ref|NP_218402.1| hypothetical protein Rv3885c [Mycobacterium tuberculosis H37Rv] gi|148663752|ref|YP_001285275.1| hypothetical protein MRA_3924 [Mycobacterium tuberculosis H37Ra] gi|148825093|ref|YP_001289847.1| hypothetical protein TBFG_13920 [Mycobacterium tuberculosis F11] 35 more sequence titles Length=537 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/375 (27%), Positives = 148/375 (40%), Gaps = 53/375 (14%) Query 60 WVAAVYAW--LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++W L R R P ++P+ A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWAVLGLRGRRPVKWNDPITLANNRSGG--GVRVQDGVAVVAVQLLGRAHRATT 111 Query 118 IVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVIG 173 + +D+++D + LL H DLE D +V+ G R G D +Y IG Sbjct 112 VTGSVTVESDNVIDVVELAPLLR-HPLDLELDSISVVTFGSRTGTVG--DYPRVYDAEIG 168 Query 174 TDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCG 233 T P R TW+++R P A R V A ++ A R+A L G+ A Sbjct 169 TPPYAGRRETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAKLA 224 Query 234 RSFD----DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHT 282 + D D +D + ++W I+G + YA P W+ RAD Sbjct 225 TATDLAELDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRADEV 284 Query 283 ITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLV 329 I V V P +T+ + T TP RL G Q RP L+GQ Sbjct 285 IQNVTVYPDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ--- 341 Query 330 ANRHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRA 380 R C LP IG +GVL+G+ N + +P D + D + V+R Sbjct 342 --RRCPLPAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVIRV 399 Query 381 AAAGAMVTVGPQFEE 395 AG V V + +E Sbjct 400 VGAGERVCVHTRDQE 414 >gi|289441327|ref|ZP_06431071.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289414246|gb|EFD11486.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=477 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/375 (27%), Positives = 148/375 (40%), Gaps = 53/375 (14%) Query 60 WVAAVYAW--LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++W L R R P ++P+ A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWAVLGLRGRRPVKWNDPITLANNRSGG--GVRVQDGVAVVAVQLLGRAHRATT 111 Query 118 IVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVIG 173 + +D+++D + LL H DLE D +V+ G R G D +Y IG Sbjct 112 VTGSVTVESDNVIDVVELAPLLR-HPLDLELDSISVVTFGSRTGTVG--DYPRVYDAEIG 168 Query 174 TDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCG 233 T P R TW+++R P A R V A ++ A R+A L G+ A Sbjct 169 TPPYAGRRETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAKLA 224 Query 234 RSFD----DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHT 282 + D D +D + ++W I+G + YA P W+ RAD Sbjct 225 TATDLAELDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRADEV 284 Query 283 ITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLV 329 I V V P +T+ + T TP RL G Q RP L+GQ Sbjct 285 IQNVTVYPDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ--- 341 Query 330 ANRHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRA 380 R C LP IG +GVL+G+ N + +P D + D + V+R Sbjct 342 --RRCPLPAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVIRV 399 Query 381 AAAGAMVTVGPQFEE 395 AG V V + +E Sbjct 400 VGAGERVCVHTRDQE 414 >gi|308371491|ref|ZP_07667180.1| hypothetical protein TMCG_01396 [Mycobacterium tuberculosis SUMu003] gi|308328581|gb|EFP17432.1| hypothetical protein TMCG_01396 [Mycobacterium tuberculosis SUMu003] Length=496 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/375 (27%), Positives = 148/375 (40%), Gaps = 53/375 (14%) Query 60 WVAAVYAW--LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++W L R R P ++P+ A + G VR Q V ++L+ R T Sbjct 36 WGQPAWSWAVLGLRGRRPVKWNDPITLANNRSGG--GVRVQDGVAVVAVQLLGRAHRATT 93 Query 118 IVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVIG 173 + +D+++D + LL H DLE D +V+ G R G D +Y IG Sbjct 94 VTGSVTVESDNVIDVVELAPLLR-HPLDLELDSISVVTFGSRTGTVG--DYPRVYDAEIG 150 Query 174 TDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCG 233 T P R TW+++R P A R V A ++ A R+A L G+ A Sbjct 151 TPPYAGRRETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAKLA 206 Query 234 RSFD----DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHT 282 + D D +D + ++W I+G + YA P W+ RAD Sbjct 207 TATDLAELDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRADEV 266 Query 283 ITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLV 329 I V V P +T+ + T TP RL G Q RP L+GQ Sbjct 267 IQNVTVYPDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ--- 323 Query 330 ANRHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRA 380 R C LP IG +GVL+G+ N + +P D + D + V+R Sbjct 324 --RRCPLPAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVIRV 381 Query 381 AAAGAMVTVGPQFEE 395 AG V V + +E Sbjct 382 VGAGERVCVHTRDQE 396 >gi|254366427|ref|ZP_04982471.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|308232601|ref|ZP_07664125.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308369267|ref|ZP_07666704.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] 19 more sequence titles Length=519 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/375 (27%), Positives = 148/375 (40%), Gaps = 53/375 (14%) Query 60 WVAAVYAW--LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++W L R R P ++P+ A + G VR Q V ++L+ R T Sbjct 36 WGQPAWSWAVLGLRGRRPVKWNDPITLANNRSGG--GVRVQDGVAVVAVQLLGRAHRATT 93 Query 118 IVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVIG 173 + +D+++D + LL H DLE D +V+ G R G D +Y IG Sbjct 94 VTGSVTVESDNVIDVVELAPLLR-HPLDLELDSISVVTFGSRTGTVG--DYPRVYDAEIG 150 Query 174 TDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCG 233 T P R TW+++R P A R V A ++ A R+A L G+ A Sbjct 151 TPPYAGRRETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAKLA 206 Query 234 RSFD----DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHT 282 + D D +D + ++W I+G + YA P W+ RAD Sbjct 207 TATDLAELDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRADEV 266 Query 283 ITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLV 329 I V V P +T+ + T TP RL G Q RP L+GQ Sbjct 267 IQNVTVYPDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ--- 323 Query 330 ANRHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRA 380 R C LP IG +GVL+G+ N + +P D + D + V+R Sbjct 324 --RRCPLPAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVIRV 381 Query 381 AAAGAMVTVGPQFEE 395 AG V V + +E Sbjct 382 VGAGERVCVHTRDQE 396 >gi|326905720|gb|EGE52653.1| conserved membrane protein [Mycobacterium tuberculosis W-148] Length=537 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/375 (27%), Positives = 148/375 (40%), Gaps = 53/375 (14%) Query 60 WVAAVYAW--LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++W L R R P ++P+ A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWAVLGLRGRRPVKWNDPITLANNRSGG--GVRVQDGVAVVAVQLLGRAHRATT 111 Query 118 IVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVIG 173 + +D+++D + LL H DLE D +V+ G R G D +Y IG Sbjct 112 VTGSVTVESDNVIDVVELAPLLR-HPLDLELDSISVVTFGSRTGTVG--DYPRVYDAEIG 168 Query 174 TDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCG 233 T P R TW+++R P A R V A ++ A R+A L G+ A Sbjct 169 TPPYAGRRETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAKLA 224 Query 234 RSFD----DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHT 282 + D D +D + ++W I+G + YA P W+ RAD Sbjct 225 TATDLAELDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRADEV 284 Query 283 ITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLV 329 I V V P +T+ + T TP RL G Q RP L+GQ Sbjct 285 IQNVTVYPDATCAATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ--- 341 Query 330 ANRHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRA 380 R C LP IG +GVL+G+ N + +P D + D + V+R Sbjct 342 --RRCPLPAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVIRV 399 Query 381 AAAGAMVTVGPQFEE 395 AG V V + +E Sbjct 400 VGAGERVCVHTRDQE 414 >gi|296138073|ref|YP_003645316.1| hypothetical protein Tpau_0334 [Tsukamurella paurometabola DSM 20162] gi|296026207|gb|ADG76977.1| hypothetical protein Tpau_0334 [Tsukamurella paurometabola DSM 20162] Length=717 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 82/311 (27%), Positives = 130/311 (42%), Gaps = 27/311 (8%) Query 1 MRNPLGLRFSTGHALLASALAPPCIIAFLETRYW--WAGIALASLGVIVATVTFYGRRIT 58 +R P+ L + AL+ + L+ + L W WA A+ +G +VA V+ +G ++ Sbjct 23 LRRPVWLSVTLRRALVWAVLS--TVFVALTAGRWPTWAVTAIPVIGALVAFVSVHGSVLS 80 Query 59 GWVAAVYAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRW-QGEFLVAVIELIPRPFTPTV 117 +AA +LRRRR D V+ D VRW G LV+ IEL T Sbjct 81 ERIAARAHYLRRRRAGYDGLPGRVIDV-----DGCGVRWGDGYELVSAIELTA-DLAETR 134 Query 118 IVDGQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQQVIGTDPA 177 + DG+A+ D + L+ +++ + +++ D+ SAG RV P + Y Q + A Sbjct 135 LRDGRAYAADTVPLDLLASMMTQYGLNVDIDVSSAGRRV--PPGPAYRASYAQGVRFYSA 192 Query 178 PANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA--VCGRS 235 A R TW++LR + R RR L+A+ R+ RL + A + Sbjct 193 MAERSTWLILRVNTRRNLAGIVRRGPSRTAGPTALMAATRRLEQRLHERRIRARILPPAE 252 Query 236 FDDYDHATDIGFV----REKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHT--I 283 D G E+W+ + ++Y Y G D WW D T + Sbjct 253 LAQLDSLLSFGADARRGEEQWNHVSYGNSYATTYFVDPGRMSTEKLDRWWGLDTDSTAVV 312 Query 284 TRVRVAPGMAP 294 R+R AP Sbjct 313 LRLRKRSAQAP 323 >gi|31795059|ref|NP_857552.1| hypothetical protein Mb3915c [Mycobacterium bovis AF2122/97] gi|121639795|ref|YP_980019.1| hypothetical protein BCG_3940c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992290|ref|YP_002646980.1| hypothetical protein JTY_3942 [Mycobacterium bovis BCG str. Tokyo 172] gi|31620657|emb|CAD96101.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121495443|emb|CAL73930.1| Possible conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775406|dbj|BAH28212.1| hypothetical protein JTY_3942 [Mycobacterium bovis BCG str. Tokyo 172] gi|341603816|emb|CCC66497.1| possible conserved membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=537 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 103/377 (28%), Positives = 149/377 (40%), Gaps = 57/377 (15%) Query 60 WVAAVYAW--LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++W L R R P ++P+ A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWAVLGLRGRRPVKWNDPITLANNRSGG--GVRVQDGVAVVAVQLLGRAHRATT 111 Query 118 IVDG-QAHTDDMLDTGLVEEL--LSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQV 171 + +D+++D V EL L H DLE D +V+ G R G D +Y Sbjct 112 VTGSVTVESDNVID---VVELAPLPRHPLDLELDSISVVTFGSRTGTVG--DYPRVYDAE 166 Query 172 IGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAV 231 IGT P R TW+++R P A R V A ++ A R+A L G+ A Sbjct 167 IGTPPYAGRRETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAK 222 Query 232 CGRSFD----DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARAD 280 + D D +D + ++W I+G + YA P W+ RAD Sbjct 223 LATATDLAELDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRAD 282 Query 281 HTITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQH 327 I V V P +T+ + T TP RL G Q RP L+GQ Sbjct 283 EVIQNVTVYPDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ- 341 Query 328 LVANRHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVV 378 R C LP IG +GVL+G+ N + +P D + D + V+ Sbjct 342 ----RRCPLPAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVI 397 Query 379 RAAAAGAMVTVGPQFEE 395 R AG V V + +E Sbjct 398 RVVGAGERVCVHTRDQE 414 >gi|289756020|ref|ZP_06515398.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289696607|gb|EFD64036.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=537 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 100/375 (27%), Positives = 147/375 (40%), Gaps = 53/375 (14%) Query 60 WVAAVYAW--LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++W L R R P ++ + A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWAVLGLRGRRPVKWNDSITLANNRSGG--GVRVQDGVAVVAVQLLGRAHRATT 111 Query 118 IVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVIG 173 + +D+++D + LL H DLE D +V+ G R G D +Y IG Sbjct 112 VTGSVTVESDNVIDVVELAPLLR-HPLDLELDSISVVTFGSRTGTVG--DYPRVYDAEIG 168 Query 174 TDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCG 233 T P R TW+++R P A R V A ++ A R+A L G+ A Sbjct 169 TPPYAGRRETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAKLA 224 Query 234 RSFD----DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHT 282 + D D +D + ++W I+G + YA P W+ RAD Sbjct 225 TATDLAELDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRADEV 284 Query 283 ITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLV 329 I V V P +T+ + T TP RL G Q RP L+GQ Sbjct 285 IQNVTVYPDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ--- 341 Query 330 ANRHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRA 380 R C LP IG +GVL+G+ N + +P D + D + V+R Sbjct 342 --RRCPLPAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVIRV 399 Query 381 AAAGAMVTVGPQFEE 395 AG V V + +E Sbjct 400 VGAGERVCVHTRDQE 414 >gi|296164032|ref|ZP_06846655.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900580|gb|EFG79963.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=514 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 98/387 (26%), Positives = 160/387 (42%), Gaps = 49/387 (12%) Query 41 ASLGVIVATVTFYGRRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPGDH-VAVRWQG 99 A+ G+++ +TF R + W +W RRR R +PV V +H V V G Sbjct 44 AATGLVICVLTFRERTVWQWAWRAMSWTRRRVRRLQ-LPQPV---DVTLNEHTVGVVIDG 99 Query 100 EFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDLEADIVSAGYRVGNT 159 + +I ++ +P+ PT++ T + + ++ + + ++ DI+ G R T Sbjct 100 HTVSTMITVLGKPYIPTLLHADHTKTLNTVPISVIAQEMQRCGLSVDVDIICEGSR---T 156 Query 160 AAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTR---KSAQRRDEGVAGLA------R 210 A + LY+ + PA R +V+R D R RRD A +A R Sbjct 157 ARDNYAELYEAALRGLPAAGQRSVTLVVRFDTRSDRILPGLLWRRDTIGAAVAASQRITR 216 Query 211 YLVASATRIADRLASHGVDAVCGRSFDDYDHATDIGFVREKWSMI-KGRDAYTAAYAAPG 269 L + R A+ DAV S ++AT +++W+ + +G AY AY Sbjct 217 ALCQTNCRARLLTAAQMNDAVAA-SLGGPENAT--ASYQDRWTNLQRGGKAYVTAYFFSA 273 Query 270 GP------DVWWSARADHT--ITRVRVAPGMAPQSTVLLTTADKP--KTPRGFARLFGGQ 319 D W+ ++DHT + +R P S ++ T +P +PR G+ Sbjct 274 SDVRSAQLDDVWAYQSDHTTLVIALRSDPAGVRASALVRLTTVQPLASSPRLVLNPMAGR 333 Query 320 RPALQGQHLVANRHCQLP-------------IGSAGVLVGETVNRCPVYMPFDD----VD 362 + L R +LP G++GVL+GE + + MP D Sbjct 334 QWEALALTLPGCRRLRLPSTPVTTELNTAVVAGASGVLLGE-LRDAMLLMPISDPAAPTR 392 Query 363 IALNLGDAQTFTQFVVRAAAAGAMVTV 389 IAL+ D Q + + RAAAAG V V Sbjct 393 IALHADDDQAVKRLIRRAAAAGEQVAV 419 >gi|240168365|ref|ZP_04747024.1| hypothetical protein MkanA1_03572 [Mycobacterium kansasii ATCC 12478] Length=541 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 110/390 (29%), Positives = 157/390 (41%), Gaps = 49/390 (12%) Query 33 YWWAGIALASLGVIVATVTFYGRRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPGDH 92 Y AGIALA +G+ V V ++G+ W A L R R P S P+ A + G Sbjct 35 YVGAGIALA-VGIAVVFVRWWGQPAWSW-----AVLGLRGRRPVSWDAPITVANNRSGG- 87 Query 93 VAVRWQGEFLVAVIELIPRPFTPTVIVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD--- 148 VR Q V ++L+ R T + +D+++D + LL H L+ D Sbjct 88 -GVRVQDGTAVVAVQLVGRAHRATTVTGSVTVESDNIIDIVDLLPLLQ-HPLGLQLDSIS 145 Query 149 IVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGL 208 IV+ G R G D +Y IGT P R TW+++R P A R V Sbjct 146 IVTIGSRTGTVG--DYPRVYDSEIGTPPYAGRRETWLIMRL-PIIDNAQALRWRTSVGAA 202 Query 209 ARYLVASATRIADRLASHGVDAVCGRSFD----DYDHATD-IGFVREKWSMIKGRDAYTA 263 A ++ A RIA L G+ A + D D +D + ++W I+G + Sbjct 203 A---ISVAQRIAGSLRCQGLRAKVATATDLVELDRRLGSDAVAGSAQRWKAIRGELGWMT 259 Query 264 AYAAPGG-------PDVWWSARADHTITRVRVAPGMAPQSTVLLTTADKPKTPRG--FAR 314 YA P P W+ RAD + V V P +T+ + T TP R Sbjct 260 TYAYPAEAISSRALPQA-WTLRADEVVQNVTVYPDATCTATITVRTPTPAPTPPSVILRR 318 Query 315 LFGGQ-----------RPALQG-QHLVANRHCQLPIGSAGVLVGETVNRCPVYMPFDD-- 360 L G Q RP L+G + V IG +GVLVG+ N + +P D Sbjct 319 LSGEQAAAAAANMCGPRPYLRGLRRSVLPTQLVSEIGPSGVLVGKLPNGDRLMIPVTDAG 378 Query 361 -VDIALNLGDAQTFTQFVVRAAAAGAMVTV 389 + D + V+R A AG V+V Sbjct 379 ELSRVFVAADDAIAKRIVIRTAGAGERVSV 408 >gi|336457499|gb|EGO36506.1| type VII secretion protein EccE [Mycobacterium avium subsp. paratuberculosis S397] Length=528 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 99/366 (28%), Positives = 146/366 (40%), Gaps = 47/366 (12%) Query 60 WVAAVYAW---LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPT 116 W ++W RR RRP D S+ P+ A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWAVLWRRGRRPIDWSA-PITVANNRSGG--GVRVQDGVAVVAVQLLGRAHRAT 110 Query 117 VIVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVI 172 ++ T+++LD + +L L+ D +V+ G R GN D +Y I Sbjct 111 LVTGSVTVETENVLDVVELAPMLH-QALGLQLDSISVVTVGSRHGNVG--DYPRVYDSEI 167 Query 173 GTDPAPANRRTWIVLR-ADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAV 231 GT P R TW+++R A + + R G A ++ A RIA L G+ A Sbjct 168 GTPPYAGRRETWLIMRLAVIDNAQALRWRTTVGAAA-----ISVAQRIAGLLRCQGLRAK 222 Query 232 CGRSFDDYDHATDIGF-----VREKWSMIKGRDAYTAAYAAP------GGPDVWWSARAD 280 + D + +G+ ++W I+G + YA P W+ RAD Sbjct 223 VANATDLAELDRRLGWDAVSGTVQRWKAIRGEAGWMTTYAYPPQAITSRNLSQAWTLRAD 282 Query 281 HTITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQRPALQGQ------HLVANR 332 I V V P +T+ + T TP RL G Q A HL R Sbjct 283 EVIQNVTVYPDGHCSATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGLR 342 Query 333 HCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRAAAA 383 +LP IG +GVL+G+ N + MP D + D + V+R A A Sbjct 343 RSRLPAELITEIGPSGVLIGKLPNGDRLLMPVTDAGELSRVFVAADDPITKRIVIRTAGA 402 Query 384 GAMVTV 389 G V V Sbjct 403 GERVCV 408 >gi|118463849|ref|YP_879453.1| hypothetical protein MAV_0159 [Mycobacterium avium 104] gi|254773216|ref|ZP_05214732.1| hypothetical protein MaviaA2_00841 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165136|gb|ABK66033.1| putative conserved membrane protein [Mycobacterium avium 104] Length=528 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 99/366 (28%), Positives = 146/366 (40%), Gaps = 47/366 (12%) Query 60 WVAAVYAW---LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPT 116 W ++W RR RRP D S+ P+ A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWAVLWRRGRRPIDWSA-PITVANNRSGG--GVRVQDGVAVVAVQLLGRAHRAT 110 Query 117 VIVDG-QAHTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVI 172 ++ T+++LD + +L L+ D +V+ G R GN D +Y I Sbjct 111 LVTGSVTVETENVLDVVELAPMLH-QALGLQLDSISVVTVGSRHGNVG--DYPRVYDSEI 167 Query 173 GTDPAPANRRTWIVLR-ADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAV 231 GT P R TW+++R A + + R G A ++ A RIA L G+ A Sbjct 168 GTPPYAGRRETWLIMRLAVIDNAQALRWRTTVGAAA-----ISVAQRIAGLLRCQGLRAK 222 Query 232 CGRSFDDYDHATDIGF-----VREKWSMIKGRDAYTAAYAAP------GGPDVWWSARAD 280 + D + +G+ ++W I+G + YA P W+ RAD Sbjct 223 VANATDLAELDRRLGWDAVSGTVQRWKAIRGEAGWMTTYAYPPQAITSRNLSQAWTLRAD 282 Query 281 HTITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQRPALQGQ------HLVANR 332 I V V P +T+ + T TP RL G Q A HL R Sbjct 283 EVIQNVTVYPDGHCSATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGLR 342 Query 333 HCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRAAAA 383 +LP IG +GVL+G+ N + MP D + D + V+R A A Sbjct 343 RSRLPAELITEIGPSGVLIGKLPNGDRLLMPVTDAGELSRVFVAADDPIAKRIVIRTAGA 402 Query 384 GAMVTV 389 G V V Sbjct 403 GERVCV 408 >gi|226305376|ref|YP_002765334.1| hypothetical protein RER_18870 [Rhodococcus erythropolis PR4] gi|226184491|dbj|BAH32595.1| hypothetical protein RER_18870 [Rhodococcus erythropolis PR4] Length=546 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/208 (31%), Positives = 89/208 (43%), Gaps = 21/208 (10%) Query 37 GIALAS---------LGVIVATVTFY---GRRITGWVAAVYAWLRRRRRPPDSSSEPVVG 84 GIA+AS +G +VA G + W+ + +LRR+ D +V Sbjct 32 GIAMASGLDWLWALAIGCVVAGSMLLHVGGWSVMSWIVKYFRYLRRK----DVDVSTIVS 87 Query 85 ATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPD 144 + +R G LVAV+E+ P T I +L T + L H Sbjct 88 FHTPSEQSIGLRVDGSSLVAVVEIAPPRDYLTRIGRHSFDASHLLPTAALVNCLYQHDIS 147 Query 145 LEA-DIVSAGYRVGN-TAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRD 202 L DIVS GYR + T A +V Y+++IG PA A R W+ LR D R + +RR Sbjct 148 LTGIDIVSHGYRAASGTPATEV---YERLIGPLPATATRSVWLALRFDALEGRAAVERRG 204 Query 203 EGVAGLARYLVASATRIADRLASHGVDA 230 G G R + +A R+ L S G A Sbjct 205 GGEQGAGRAIAVAANRVIRVLDSAGCKA 232 >gi|54022791|ref|YP_117033.1| hypothetical protein nfa8240 [Nocardia farcinica IFM 10152] gi|54014299|dbj|BAD55669.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=592 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/137 (32%), Positives = 65/137 (48%), Gaps = 3/137 (2%) Query 90 GDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDLEA-D 148 G VRW L+ ++ + P P T++ G TD +L + LS L + D Sbjct 123 GGSYGVRWDNGLLITMMRIDPPPDALTLLRRGSLSTDQVLPLTEIGRCLSQFDIQLASID 182 Query 149 IVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGL 208 ++S G R + V LY +IG PA A+R W+VLR DP ++ R G G Sbjct 183 VISTGARTASNGI--VARLYDSIIGPLPAIAHRTVWLVLRLDPLANVRAVDNRGGGATGT 240 Query 209 ARYLVASATRIADRLAS 225 R + + R+A+RLA+ Sbjct 241 LRTAIIATRRVANRLAA 257 >gi|254821875|ref|ZP_05226876.1| hypothetical protein MintA_18217 [Mycobacterium intracellulare ATCC 13950] Length=540 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 99/367 (27%), Positives = 145/367 (40%), Gaps = 49/367 (13%) Query 60 WVAAVYAW---LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPT 116 W ++W RR RRP D S+ P+ A + G VR Q V ++L+ R T Sbjct 54 WGLPAWSWAVLWRRGRRPIDWSA-PITVANNRSGG--GVRVQDGVAVVAVQLLGRAHRAT 110 Query 117 VIVDG-QAHTDDMLDT-GLVEELLSVHCPDLEA-DIVSAGYRVGNTAAPDVVSLYQQVIG 173 ++ T+++LD LV L L++ +VS G R G D +Y IG Sbjct 111 MVTGSVTVETENVLDVVELVPMLRQALGLQLDSISVVSIGSRHGTVG--DYPRVYDSEIG 168 Query 174 TDPAPANRRTWIVLR-ADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVC 232 T P R TW+++R A + R G A ++ A RIA L G+ A Sbjct 169 TPPYAGRRETWLIMRLAVLDNAHALVWRTTVGAAA-----ISVAQRIAGLLRCEGLRAKV 223 Query 233 GRSFDDYDHATDIGFV-----REKWSMIKGRDAYTAAYAAPGGPDVW--------WSARA 279 + D + +G+ ++W I+G + YA P P+ W+ RA Sbjct 224 ANATDLIELDRRLGWDAVSGPAQRWKAIRGEAGWLTTYAYP--PEAIMSRHLSQAWTLRA 281 Query 280 DHTITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQRPALQGQ------HLVAN 331 D I + V P +T+ + T TP RL G Q A HL Sbjct 282 DEVIQNITVYPDGQCTATITVRTPTPAPTPPSVILRRLNGEQAAAASANMCGPRPHLRGI 341 Query 332 RHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRAAA 382 R LP IG +GVL+G+ N + +P D + D + V+R A Sbjct 342 RRSPLPAELVTEIGPSGVLIGKLSNGDRLLVPVTDAGELSRVFVAADDPIAKRIVIRTAG 401 Query 383 AGAMVTV 389 AG V V Sbjct 402 AGERVCV 408 >gi|296167000|ref|ZP_06849413.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897630|gb|EFG77223.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=519 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 101/367 (28%), Positives = 144/367 (40%), Gaps = 49/367 (13%) Query 60 WVAAVYAWLR--RRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTV 117 W ++WL RR R P S P+ A + G VR Q V ++L+ R T Sbjct 54 WGQPAWSWLVLWRRGRRPISWDAPITVANNRSGG--GVRVQDGVAVVAVQLLGRAHQATT 111 Query 118 IVDG-QAHTDDMLDTGLVEELLSV--HCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQV 171 + TD+++D V EL+ + L+ D +VS G R GN D +Y Sbjct 112 VTGSVTVETDNVID---VVELVPMMRQALGLQLDSISVVSLGSRHGNIG--DYPRVYDSE 166 Query 172 IGTDPAPANRRTWIVLRAD-PERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA 230 IGT P R TW+++R + T+ R G A ++ A RIA L G+ A Sbjct 167 IGTPPYAGRRETWLIMRLSIIDNTQALRWRTTVGAAA-----ISLAQRIAGLLRCQGLRA 221 Query 231 VCGRSFD--DYDHATDIGFVR---EKWSMIKGRDAYTAAYAAPGGP------DVWWSARA 279 + D + D V ++W I+G + YA P W+ RA Sbjct 222 KVATATDLAELDRRLGCDAVEGDAQRWKAIRGEAGWMTTYAYPAEAITSRVLSQAWTLRA 281 Query 280 DHTITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQRPALQGQ------HLVAN 331 D I V V P +T+ + T TP RL G Q A +L A Sbjct 282 DEVIQNVTVYPDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPYLRAL 341 Query 332 RHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRAAA 382 R LP IG +GVL+G+ N + +P D + D + V+R A Sbjct 342 RPSPLPGQLLTEIGPSGVLIGKLSNGDRLLVPVTDAGELSRVFVAADDPVAKRIVIRTAG 401 Query 383 AGAMVTV 389 AG V V Sbjct 402 AGERVCV 408 >gi|15843517|ref|NP_338554.1| hypothetical protein MT4000 [Mycobacterium tuberculosis CDC1551] gi|13883892|gb|AAK48368.1| hypothetical protein MT4000 [Mycobacterium tuberculosis CDC1551] Length=422 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 85/308 (28%), Positives = 122/308 (40%), Gaps = 48/308 (15%) Query 124 HTDDMLDTGLVEELLSVHCPDLEAD---IVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 +D+++D + LL H DLE D +V+ G R G D +Y IGT P Sbjct 4 ESDNVIDVVELAPLLR-HPLDLELDSISVVTFGSRTGTVG--DYPRVYDAEIGTPPYAGR 60 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRSFD--- 237 R TW+++R P A R V A ++ A R+A L G+ A + D Sbjct 61 RETWLIMRL-PVIGNTQALRWRTSVGAAA---ISVAQRVASSLRCQGLRAKLATATDLAE 116 Query 238 -DYDHATD-IGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHTITRVRVA 289 D +D + ++W I+G + YA P W+ RAD I V V Sbjct 117 LDRRLGSDAVAGSAQRWKAIRGEAGWMTTYAYPAEAISSRVLSQAWTLRADEVIQNVTVY 176 Query 290 PGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLVANRHCQL 336 P +T+ + T TP RL G Q RP L+GQ R C L Sbjct 177 PDATCTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPRPHLRGQ-----RRCPL 231 Query 337 P------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRAAAAGAMV 387 P IG +GVL+G+ N + +P D + D + V+R AG V Sbjct 232 PAQLVTEIGPSGVLIGKLSNGDRLMIPVTDAGELSRVFVAADDTIAKRIVIRVVGAGERV 291 Query 388 TVGPQFEE 395 V + +E Sbjct 292 CVHTRDQE 299 >gi|229489345|ref|ZP_04383208.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323442|gb|EEN89200.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=546 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/207 (29%), Positives = 86/207 (42%), Gaps = 9/207 (4%) Query 26 IAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAVYAWLRRRRRPPDSSSEPVVGA 85 IA W+ G+A+ + + G + W+ + +L R+ D +V Sbjct 33 IAMASGLDWFWGLAIGCVVAGSMLLHVGGWSVMSWIVRYFRYLHRK----DVDRSTIVSF 88 Query 86 TVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDL 145 + +R G LVAV+E+ P T I +L T + L H L Sbjct 89 HTPSEQSIGLRVDGSSLVAVVEIAPPRDYLTRIGRHSFDASHLLPTAALANCLYQHDISL 148 Query 146 EA-DIVSAGYRVGN-TAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDE 203 DIVS GYR + T A +V Y+++IG PA A R W+ LR D + +RR Sbjct 149 TGIDIVSHGYRAASGTPATEV---YERLIGPLPATATRSVWLALRFDALEGGAAVERRGG 205 Query 204 GVAGLARYLVASATRIADRLASHGVDA 230 G G R + +A R+ L S G A Sbjct 206 GEQGAGRAIAVAANRVIRVLDSAGCKA 232 >gi|342860120|ref|ZP_08716772.1| hypothetical protein MCOL_14615 [Mycobacterium colombiense CECT 3035] gi|342132498|gb|EGT85727.1| hypothetical protein MCOL_14615 [Mycobacterium colombiense CECT 3035] Length=540 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 99/367 (27%), Positives = 147/367 (41%), Gaps = 49/367 (13%) Query 60 WVAAVYAW---LRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPT 116 W ++W RR RRP D S+ P+ A + G VR Q V ++L+ R T Sbjct 58 WGQPAWSWAVLWRRGRRPIDWSA-PITVANNRSGG--GVRVQDGVAVVAVQLLGRGHRAT 114 Query 117 VIVDG-QAHTDDMLDTGLVEELLSVH-CPDLEAD---IVSAGYRVGNTAAPDVVSLYQQV 171 ++ T+++LD +VE + +H L+ D +V+ G R G D +Y Sbjct 115 MVTGSVTVETENVLD--IVELVPMLHQALGLQLDSISVVTIGSRHGTIG--DFPRVYDSE 170 Query 172 IGTDPAPANRRTWIVLR-ADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA 230 IGT P R TW+++R A + + R G A ++ A RIA L G+ A Sbjct 171 IGTPPYAGRRETWLIMRLAVIDNAQALFWRTTVGAAA-----ISVAQRIAGLLRCQGLRA 225 Query 231 VCGRSFDDYDHATDIGF-----VREKWSMIKGRDAYTAAYAAPG------GPDVWWSARA 279 + D + +G+ ++W I+G + YA P W+ RA Sbjct 226 KVATATDLVELDRRLGWDAVSGTAQRWKAIRGEAGWMTTYAYPAEAITSRNLSQAWTLRA 285 Query 280 DHTITRVRVAPGMAPQSTVLLTTADKPKTPRG--FARLFGGQRPALQGQ------HLVAN 331 D I V V P +T+ + T TP RL G Q A +L Sbjct 286 DEVIQNVTVFPDGECTATITVRTPTPAPTPPSVILRRLNGEQAAAAAANMCGPLPYLRGI 345 Query 332 RHCQLP------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRAAA 382 R LP IG +GVL+G+ N + MP D + D + V+R A Sbjct 346 RRSPLPPQLVTEIGPSGVLIGKLSNGDRLLMPVTDAGELSRVFVAADDPIAKRIVIRTAG 405 Query 383 AGAMVTV 389 AG V V Sbjct 406 AGERVCV 412 >gi|262203185|ref|YP_003274393.1| hypothetical protein Gbro_3296 [Gordonia bronchialis DSM 43247] gi|262086532|gb|ACY22500.1| hypothetical protein Gbro_3296 [Gordonia bronchialis DSM 43247] Length=586 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/223 (26%), Positives = 91/223 (41%), Gaps = 28/223 (12%) Query 54 GRRITGWVAAVYAWLRRRRRPPDSSSEPV---------VGATVKPGDHVAVRWQGEFLVA 104 GRR++ Y W R RRR +++ P T +P + + RW G LV Sbjct 80 GRRLS------YRWTRLRRRAAETAPAPFDIPIATRDRARFTGRPAETIGARWDGRTLVT 133 Query 105 VIELIPRPFTPTVIVDGQAH----TDDMLDTGLVEELLSVHCPDLEA-DIVSAGYRVGNT 159 V+ + P PT + A + ++ E +S + L + +I+S G R Sbjct 134 VLRVDPGEEVPTFLTPAGAQPAVAAGQSVPIDVLAECISPYDIRLSSVEIISHGLRTRGY 193 Query 160 AAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRI 219 V + YQ+ +G PA A R ++V+R DP + RR G G R + R+ Sbjct 194 GP--VTATYQRTLGPLPATAQRSVFVVIRLDPLDCPDAVARRGGGATGALRTATIATRRV 251 Query 220 ADRLASHGVDAVCGRSFDDYDHAT------DIGFVREKWSMIK 256 A RL HG+ + D T +G E+W ++ Sbjct 252 AKRLTEHGLRVAILAAADITAVDTFLLDGASVGTAAEQWDSVR 294 >gi|343926912|ref|ZP_08766405.1| hypothetical protein GOALK_072_01340 [Gordonia alkanivorans NBRC 16433] gi|343763272|dbj|GAA13331.1| hypothetical protein GOALK_072_01340 [Gordonia alkanivorans NBRC 16433] Length=573 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/182 (29%), Positives = 77/182 (43%), Gaps = 22/182 (12%) Query 65 YAWLRRRRRPPDSSSEP----VVGATVKPGDH-------VAVRWQGEFLVAVIELIPRPF 113 ++W R RR D P + G + +P + RW G+ LV V+ + P Sbjct 68 FSWSRMRRSDADLDPAPFDVPLAGPSTRPSARRSSAPTTIGARWVGDTLVTVVRVDPGGP 127 Query 114 TPTVIVDGQAHTDDMLDTGLVEELLSVHCPD------LEADIVSAGYRV-GNTAAPDVVS 166 T + G + D + LV + C D +++S G RV G+ AP + Sbjct 128 AVTYLTPGNSTLGDQ-NGQLVPLDVLAECIDRYDIALSSIEVISHGVRVWGSGVAP---A 183 Query 167 LYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASH 226 Y + +G A A R ++VLR DP + RR G G R + R+A RLA H Sbjct 184 TYDRTLGPLSATAQRSVFVVLRLDPLECPDAVARRGGGATGALRTATVTTRRVAKRLAEH 243 Query 227 GV 228 G+ Sbjct 244 GL 245 >gi|333918176|ref|YP_004491757.1| hypothetical protein AS9A_0500 [Amycolicicoccus subflavus DQS3-9A1] gi|333480397|gb|AEF38957.1| hypothetical protein AS9A_0500 [Amycolicicoccus subflavus DQS3-9A1] Length=578 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 92/398 (24%), Positives = 141/398 (36%), Gaps = 62/398 (15%) Query 41 ASLGVIVATVTFYGRRITGWVAA-VYAWLRRRRRPPDSSS-------EPVVGATVKPGDH 92 A L I+ T+ GR + W AA + A + PD V G Sbjct 45 AVLLAILCLATWRGRLLIDWAAAPLTAHAKAYAEDPDPIGRVFSVPLSQVTGIEAPGATA 104 Query 93 VAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDLEA-DIVS 151 + + +G A++E+ P P + + + +LL + L D+V+ Sbjct 105 IGIHCRGTSSAAILEITSAPLMPAAFGRDSYAGETAVPMRALSKLLDQYGFALSGIDVVT 164 Query 152 AGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGLARY 211 G + +T + Y ++I PA ++RRTWIVLR D + + QRR G AG+ + Sbjct 165 HGLK--STTDHPIGQHYARLIAPLPAASHRRTWIVLRLDTLDSWREIQRRGGGDAGIGQA 222 Query 212 LVASATRIADRLASHGVDAV---------CGRSFDDYDHATDIGF--------------- 247 L +A R +LAS G GRS +D +G Sbjct 223 LAVTAVRAQRQLASEGFGTTPLTAADIERIGRSAPRFDRIYALGAPGLSPEQMLPVWQPA 282 Query 248 ------------VREKWSMIKGRDAYTAAYAAPGGPDVWWSARADHTITRVRVAPGMAPQ 295 VRE + + R A PDV + + + Q Sbjct 283 TSLTALTLQLRRVRENANCTEARYGVAAVAGHASAPDVKRTPIPVAHAVPLSGHGDLVHQ 342 Query 296 STVLLTTADKPKTP--RGFARLFGGQRPALQGQHLVANRHCQLPIGSAGVLVGETVNRCP 353 + L + D G AR + P+L +P G G L+G Sbjct 343 ILLPLGSGDAATMSGTLGRARFPADKLPSL-----------HIPAGGCGQLIGTDQMGRA 391 Query 354 VYMPF--DDVDIALNLGDAQTFTQFVVRAAAAGAMVTV 389 + +P V A+ G Q Q V+RA AAGA V + Sbjct 392 ITIPLASSSVRYAMVAGRIQLVQQVVIRAVAAGAHVRI 429 >gi|333988688|ref|YP_004521302.1| hypothetical protein JDM601_0048 [Mycobacterium sp. JDM601] gi|333484656|gb|AEF34048.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=517 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/362 (26%), Positives = 134/362 (38%), Gaps = 51/362 (14%) Query 65 YAWLRRRRRPPDSSSEPVVGATVKPGDHVAVRWQGEFLVAVIELIPRPFTPTVIVDG-QA 123 +A LR RRR +EP+ A + G VR Q V + L+ R TV Sbjct 62 WALLRLRRRKATDWAEPITVANNRAGG--GVRIQDGVAVVAVHLLGRAHAATVATGSVNV 119 Query 124 HTDDMLDTGLVEELLSVHCPDL---EADIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPAN 180 TD+++D + +L H L ++S G R T D +Y IGT P Sbjct 120 ETDNVIDVSALLPMLR-HALGLVLESMSVISIGARRATTG--DYPRVYDTEIGTPPYAGQ 176 Query 181 RRTWIVLRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDAVCGRS----- 235 R TW++LR + + R L VA A +IA L G+ A + Sbjct 177 RETWLLLRLRVIDNTAALRWRTT----LGATAVAVAQQIAGLLRCEGLRARVATASDLVE 232 Query 236 FDDYDHATDIGFVREKWSMIKGRDAYTAAYAAPGGP------DVWWSARADHTITRVRVA 289 D + E+W ++ + YA P W+ D + + V Sbjct 233 LDRRLGGALLLAGAERWKTLRTEGGWVTTYAYPARAINAQLLAQVWTLPVDEVVQNITVF 292 Query 290 PGMAPQSTVLLTTADKPKTPRG--FARLFGGQ-----------RPALQGQHLVANRHCQL 336 P +TV L T TP RL G Q RP L+G R +L Sbjct 293 PDGTCTATVTLQTPQPAPTPPAVVLQRLNGEQAAAVAANMCAPRPRLRGL-----RPGRL 347 Query 337 P------IGSAGVLVGETVNRCPVYMPFDD---VDIALNLGDAQTFTQFVVRAAAAGAMV 387 P IG +GVL+G+ N + +P D + + + ++RAA AG V Sbjct 348 PATLSVEIGPSGVLIGKLANGDRLMVPLTDSGELSRVFIAAEDLIAKRIIIRAAGAGERV 407 Query 388 TV 389 V Sbjct 408 CV 409 >gi|240169213|ref|ZP_04747872.1| hypothetical protein MkanA1_07864 [Mycobacterium kansasii ATCC 12478] gi|296165326|ref|ZP_06847868.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899342|gb|EFG78806.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=530 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 87/342 (26%), Positives = 129/342 (38%), Gaps = 52/342 (15%) Query 93 VAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDLEA-DIVS 151 V +R G LVAV+ + P +P+ + + + L V L LE DIVS Sbjct 95 VGIRAVGPHLVAVVAVDGPPHSPSALDYSRVESMTKLPLEAVAAGLEQFDVTLEGIDIVS 154 Query 152 AGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGL--- 208 AG R + + +Y +G PA RRTW+V+R D + ++ R+ A + Sbjct 155 AGVRRASKSHHPYAPVYSGAVGDHPAVGQRRTWLVVRLDALASARAIVWRESVAATMSAA 214 Query 209 --------------ARYLVASATRIADRLASHGVDAV-CGRSFDDYDHATDIGFVREKWS 253 AR L A+ R AD G+D + HA G+V+ W Sbjct 215 AEWLAAELTSLRIPARVLTAAQIRSADEALLAGIDPNGLTPGWSRLRHAG--GYVQTYW- 271 Query 254 MIKGRDAYTAAYAAPGGPDVWWSARADHTIT--RVRVAPGMAPQSTVLL----------- 300 + RD + D W+ T+ +VR A A V++ Sbjct 272 -MSPRDISSTTI------DRLWAPETAATVVSIQVRRADTGATAVGVMVRYHSGGPLAEP 324 Query 301 -TTADKPKTPRGFARLFGGQRPALQG------QHLVANRHCQLPIGSAGVLVGETVNRCP 353 T P R A L G A G + L AN +PIG+ G++VG + P Sbjct 325 PLTGLNPFVGRHDAGLRAGLLSAGNGGLAVPARELAANEKVAVPIGATGIIVGTLPSGHP 384 Query 354 VYMPFDD---VDIALNLGDAQTFTQFVVRAAAAGAMVTVGPQ 392 + + D + G+ Q +RAAA G V V Q Sbjct 385 LLVDLSDPTELATVTICGEFALLVQVSLRAAATGYQVLVCTQ 426 >gi|300782643|ref|YP_003762934.1| hypothetical protein AMED_0712 [Amycolatopsis mediterranei U32] gi|299792157|gb|ADJ42532.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340524014|gb|AEK39219.1| hypothetical protein RAM_03635 [Amycolatopsis mediterranei S699] Length=411 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 76/315 (25%), Positives = 120/315 (39%), Gaps = 74/315 (23%) Query 15 LLASALAPPCIIAFLETRYWWAGIALASLGVIVATVTFYGRRITGWVAAVYAWLRRRRRP 74 +L LA ++ ++ + GI +A +IVA + + GR T WV LR R Sbjct 24 VLEVGLAIGLVLLAIDMSLKYVGIGIAGFALIVALLRWRGRWFTQWVGLT---LRYTFRS 80 Query 75 PDSSSEPVVGATVK-----------PGD------------------------HVAVRWQG 99 D ++P+ +TV+ P D V + W Sbjct 81 HDRVADPLPPSTVEAMTAEETTVTGPDDARVNLLRIAVPDLVVAHGVDHERQQVGLAWND 140 Query 100 EFLVAVIELIPRPFTPTVIVDG------QAHTDDMLDTGLVEELLSV--HCPDLEADIVS 151 AV+ + P P T DG A + D G+V + + + HC Sbjct 141 GTWTAVLLVEPAPALITQ-ADGAPSLPLSALAPCLEDRGVVLDSIQMIWHC--------- 190 Query 152 AGYRVGNTAAPD---VVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRRDEGVAGL 208 G+ A P +S Y +V+G PA A R TW+ +R DP R + + R GV G Sbjct 191 ---YPGSAALPSDSPALSSYMEVLGPLPAAARRTTWVAIRLDPRRCPAAIRERGGGVVGA 247 Query 209 ARYLVASATRIADRLASHGV-------DAVCGRSFDDYDHATDIG-----FVREKWSMIK 256 R L+ + +R+ + L S GV D + + + G ++E+WS + Sbjct 248 HRALIGALSRVRNALESQGVPTRPLDPDELLRAGISAAELTSVAGSPTKVTMQERWSGVT 307 Query 257 GRDAYTAAYAAPGGP 271 A+YA G P Sbjct 308 AAGIGHASYAITGWP 322 >gi|333990540|ref|YP_004523154.1| hypothetical protein JDM601_1900 [Mycobacterium sp. JDM601] gi|333486508|gb|AEF35900.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=374 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 78/288 (28%), Positives = 115/288 (40%), Gaps = 42/288 (14%) Query 34 WWAGIALASLGVIVATVTFYGRRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPGDH- 92 WW+G+ +A L I+A VT+ I+ AA +A + D+ + G T H Sbjct 29 WWSGVGVAVLVAIIALVTYRQVPISTMWAAWFA-----DQFADTETALSRGRTPAVDHHR 83 Query 93 ------VAVRWQGEFLVAVIELIPRPFTPTVIVDGQAHTDDMLDTGLVEELLSVHCPDLE 146 + +R LV VI + RP T H + L E L+ + Sbjct 84 RFGREPIGMREHQGRLVTVIAVGGRPVQAT-----GRHRRGLEPAALPLERLAGGLRQFD 138 Query 147 A-----DIVSAGYRVGNTAAPDVVSLYQQVIGTDPAPANRRTWIVLRADPERTRKSAQRR 201 DIVS G R + DV T P +RRTW+VLR DP+ + R Sbjct 139 VRLDSIDIVSVGTRSAPRDSEDV-----DFDDTPSMPDHRRTWLVLRMDPQHNVNAVAAR 193 Query 202 DEGVAGLARYLVASATRIADRLASHGVDAVCGRS--FDDYDHATDIGFVREKWS--MIKG 257 D LA L A+ R+A+ + + A R+ FDD D AT G + S + + Sbjct 194 D----SLAATLTAATERLAEEIDGRLISARPLRADEFDDVDEATLAGLEAAQLSHRLFRN 249 Query 258 RDA--YTAAYAAPG-----GPDVWWSARADHTITRVRVAPGMAPQSTV 298 R T + +P + W D T+ VR+APG ++V Sbjct 250 RPEGHVTNFWLSPADITDENLEHLWYPETDATVVTVRLAPGGGRTTSV 297 >gi|296165445|ref|ZP_06847981.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899185|gb|EFG78655.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=581 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/238 (30%), Positives = 96/238 (41%), Gaps = 28/238 (11%) Query 4 PLGLRFSTGHALLASALAPPCIIAFLETRY-WWAGIALASLGVIVATVTFYGRRITGWVA 62 P+ + + G L A + RY WW A+ + +I+ VT + R WV Sbjct 5 PVTVHPALGAVLGAEVIGIAAFATLPTYRYGWWPATAITVVALILLAVTVHRRNAAIWVR 64 Query 63 AVYAWLRRRRRPPDSSSEPVVGATVK---PGDHVAVRWQGEFLVAVIELIPRPFTPTVIV 119 WLR RR GA V G VR V +IE+ R ++PT + Sbjct 65 DRSRWLRGRRH------TTAAGAAVDISHGGGVYGVRTADNEAVTMIEVDGRAYSPTYLR 118 Query 120 DGQ-AHTDDMLD----TGLVEELLSVHCPDLEADIVSAGYRVG-NTAAPDVVSLYQQVIG 173 + TD++L GL+E+ +H L DIVSAGYRV T P LY ++ Sbjct 119 GSTLSLTDNLLPLNVVMGLMEQPGGLH---LGVDIVSAGYRVRPGTGYP---HLYSTLLA 172 Query 174 TDPAPANRRTWIVLRAD-PERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA 230 A R T +++R D E R RR G A A+ RI L G A Sbjct 173 DRGAAGQRSTHLIVRLDITESVRGLMYRRSIGSAA-----AAATERIVKALEQEGCRA 225 Lambda K H 0.322 0.137 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 970409775566 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40