BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3887c Length=509 Score E Sequences producing significant alignments: (Bits) Value gi|15611023|ref|NP_218404.1| transmembrane protein [Mycobacteriu... 992 0.0 gi|323717303|gb|EGB26508.1| hypothetical protein TMMG_00383 [Myc... 991 0.0 gi|289445488|ref|ZP_06435232.1| conserved membrane protein [Myco... 990 0.0 gi|289747732|ref|ZP_06507110.1| conserved transmembrane protein ... 987 0.0 gi|340628859|ref|YP_004747311.1| hypothetical protein MCAN_39091... 984 0.0 gi|289572146|ref|ZP_06452373.1| conserved membrane protein [Myco... 968 0.0 gi|167969425|ref|ZP_02551702.1| conserved transmembrane protein ... 905 0.0 gi|15843518|ref|NP_338555.1| hypothetical protein MT4002 [Mycoba... 904 0.0 gi|339296695|gb|AEJ48806.1| transmembrane protein [Mycobacterium... 902 0.0 gi|41406262|ref|NP_959098.1| hypothetical protein MAP0164 [Mycob... 739 0.0 gi|336457497|gb|EGO36504.1| type VII secretion integral membrane... 736 0.0 gi|240168367|ref|ZP_04747026.1| putative transmembrane protein [... 721 0.0 gi|296167003|ref|ZP_06849416.1| transmembrane protein [Mycobacte... 714 0.0 gi|289764079|ref|ZP_06523457.1| conserved hypothetical protein [... 714 0.0 gi|254821257|ref|ZP_05226258.1| secretion protein Snm4 [Mycobact... 685 0.0 gi|342860122|ref|ZP_08716774.1| secretion protein Snm4 [Mycobact... 684 0.0 gi|254773213|ref|ZP_05214729.1| secretion protein Snm4 [Mycobact... 677 0.0 gi|118464269|ref|YP_879451.1| secretion protein Snm4 [Mycobacter... 675 0.0 gi|31795061|ref|NP_857554.1| transmembrane protein [Mycobacteriu... 545 1e-152 gi|333988690|ref|YP_004521304.1| transmembrane protein [Mycobact... 501 1e-139 gi|289760058|ref|ZP_06519436.1| transmembrane protein [Mycobacte... 426 5e-117 gi|289748423|ref|ZP_06507801.1| conserved membrane protein [Myco... 421 1e-115 gi|289760059|ref|ZP_06519437.1| transmembrane protein [Mycobacte... 370 4e-100 gi|341603818|emb|CCC66499.1| probable conserved transmembrane pr... 246 6e-63 gi|119855165|ref|YP_935770.1| hypothetical protein Mkms_5780 [My... 182 2e-43 gi|296165447|ref|ZP_06847983.1| conserved hypothetical protein [... 126 7e-27 gi|296164783|ref|ZP_06847344.1| secretion protein Snm4 [Mycobact... 123 6e-26 gi|183982684|ref|YP_001850975.1| hypothetical protein MMAR_2677 ... 112 1e-22 gi|118618463|ref|YP_906795.1| hypothetical protein MUL_3080 [Myc... 112 2e-22 gi|342861301|ref|ZP_08717949.1| secretion protein Snm4 [Mycobact... 110 6e-22 gi|333990538|ref|YP_004523152.1| hypothetical protein JDM601_189... 104 3e-20 gi|254775395|ref|ZP_05216911.1| secretion protein Snm4 [Mycobact... 102 2e-19 gi|254820296|ref|ZP_05225297.1| secretion protein Snm4 [Mycobact... 102 2e-19 gi|118466119|ref|YP_882105.1| secretion protein Snm4 [Mycobacter... 101 3e-19 gi|336457559|gb|EGO36564.1| type VII secretion integral membrane... 98.6 3e-18 gi|41407608|ref|NP_960444.1| hypothetical protein MAP1510 [Mycob... 98.2 3e-18 gi|296164030|ref|ZP_06846653.1| conserved hypothetical protein [... 97.8 4e-18 gi|15827809|ref|NP_302072.1| hypothetical protein ML1539 [Mycoba... 96.7 1e-17 gi|289574472|ref|ZP_06454699.1| conserved membrane protein [Myco... 84.0 6e-14 gi|240172855|ref|ZP_04751514.1| hypothetical protein MkanA1_2631... 79.3 1e-12 gi|31792983|ref|NP_855476.1| hypothetical protein Mb1823 [Mycoba... 71.6 3e-10 gi|121637696|ref|YP_977919.1| hypothetical protein BCG_1827 [Myc... 70.1 8e-10 gi|339298359|gb|AEJ50469.1| hypothetical protein CCDC5180_1632 [... 70.1 8e-10 gi|15608932|ref|NP_216311.1| hypothetical protein Rv1795 [Mycoba... 70.1 8e-10 gi|167967227|ref|ZP_02549504.1| hypothetical protein MtubH3_0397... 69.7 1e-09 gi|240169215|ref|ZP_04747874.1| hypothetical protein MkanA1_0787... 64.3 5e-08 gi|296138071|ref|YP_003645314.1| secretion protein snm4 [Tsukamu... 59.7 1e-06 gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_0353... 56.6 1e-05 gi|339294731|gb|AEJ46842.1| hypothetical membrane protein [Mycob... 55.5 2e-05 gi|169630836|ref|YP_001704485.1| hypothetical protein MAB_3757 [... 51.6 3e-04 >gi|15611023|ref|NP_218404.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|121639797|ref|YP_980021.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663754|ref|YP_001285277.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] 49 more sequence titles Length=509 Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/509 (99%), Positives = 509/509 (100%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +TAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV Sbjct 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG Sbjct 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW Sbjct 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA Sbjct 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL Sbjct 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 TVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 >gi|323717303|gb|EGB26508.1| hypothetical protein TMMG_00383 [Mycobacterium tuberculosis CDC1551A] Length=509 Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/509 (99%), Positives = 509/509 (100%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +TAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDG+TLVLVPRVAGESFEPQYESLSTGLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGNTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV Sbjct 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG Sbjct 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW Sbjct 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA Sbjct 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL Sbjct 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 TVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 >gi|289445488|ref|ZP_06435232.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289418446|gb|EFD15647.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length=509 Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/509 (99%), Positives = 508/509 (99%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +TAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMG WL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGNWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV Sbjct 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG Sbjct 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW Sbjct 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA Sbjct 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL Sbjct 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 TVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 >gi|289747732|ref|ZP_06507110.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289688260|gb|EFD55748.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] Length=509 Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/509 (99%), Positives = 507/509 (99%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +TAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV Sbjct 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG Sbjct 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW Sbjct 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEA ADDEDNELTDITARGTAIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEAGADDEDNELTDITARGTAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA Sbjct 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATR RPIIRL Sbjct 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRVRPIIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 TVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 >gi|340628859|ref|YP_004747311.1| hypothetical protein MCAN_39091 [Mycobacterium canettii CIPT 140010059] gi|340007049|emb|CCC46240.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=509 Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/509 (99%), Positives = 506/509 (99%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +TAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLL Sbjct 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLA 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAI IG Sbjct 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAIAIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW Sbjct 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVGMCVGVSLVLPAAVWGVLTP QPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA Sbjct 361 VNAVQVGMCVGVSLVLPAAVWGVLTPGQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL Sbjct 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 TVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 >gi|289572146|ref|ZP_06452373.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289545901|gb|EFD49548.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=497 Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/497 (99%), Positives = 497/497 (100%), Gaps = 0/497 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +TAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV Sbjct 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG Sbjct 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW Sbjct 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA Sbjct 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL Sbjct 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 Query 481 TVEWLEVLAMIALLPAA 497 TVEWLEVLAMIALLPAA Sbjct 481 TVEWLEVLAMIALLPAA 497 >gi|167969425|ref|ZP_02551702.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|254548891|ref|ZP_05139338.1| hypothetical protein Mtube_00240 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294995572|ref|ZP_06801263.1| hypothetical protein Mtub2_13962 [Mycobacterium tuberculosis 210] gi|297636573|ref|ZP_06954353.1| hypothetical protein MtubK4_20710 [Mycobacterium tuberculosis KZN 4207] gi|297733568|ref|ZP_06962686.1| hypothetical protein MtubKR_20855 [Mycobacterium tuberculosis KZN R506] gi|313660899|ref|ZP_07817779.1| hypothetical protein MtubKV_20850 [Mycobacterium tuberculosis KZN V2475] Length=469 Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/469 (100%), Positives = 469/469 (100%), Gaps = 0/469 (0%) Query 41 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE 100 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE Sbjct 1 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE 60 Query 101 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 160 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR Sbjct 61 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 120 Query 161 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 220 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL Sbjct 121 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 180 Query 221 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA 280 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA Sbjct 181 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA 240 Query 281 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE 340 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE Sbjct 241 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE 300 Query 341 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGL 400 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGL Sbjct 301 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGL 360 Query 401 TVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAA 460 TVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAA Sbjct 361 TVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAA 420 Query 461 LGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 LGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 421 LGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 469 >gi|15843518|ref|NP_338555.1| hypothetical protein MT4002 [Mycobacterium tuberculosis CDC1551] gi|13883893|gb|AAK48369.1| hypothetical protein MT4002 [Mycobacterium tuberculosis CDC1551] Length=469 Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/469 (99%), Positives = 469/469 (100%), Gaps = 0/469 (0%) Query 41 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE 100 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDG+TLVLVPRVAGE Sbjct 1 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGNTLVLVPRVAGE 60 Query 101 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 160 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR Sbjct 61 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 120 Query 161 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 220 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL Sbjct 121 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 180 Query 221 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA 280 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA Sbjct 181 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA 240 Query 281 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE 340 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE Sbjct 241 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE 300 Query 341 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGL 400 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGL Sbjct 301 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGL 360 Query 401 TVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAA 460 TVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAA Sbjct 361 TVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAA 420 Query 461 LGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 LGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 421 LGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 469 >gi|339296695|gb|AEJ48806.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] gi|339300288|gb|AEJ52398.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=468 Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/468 (99%), Positives = 468/468 (100%), Gaps = 0/468 (0%) Query 42 VELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGES 101 +ELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGES Sbjct 1 MELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGES 60 Query 102 FEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRT 161 FEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRT Sbjct 61 FEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRT 120 Query 162 ITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALG 221 ITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALG Sbjct 121 ITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALG 180 Query 222 AAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAI 281 AAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAI Sbjct 181 AAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAI 240 Query 282 CVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDED 341 CVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDED Sbjct 241 CVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDED 300 Query 342 NELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLT 401 NELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLT Sbjct 301 NELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLT 360 Query 402 VGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAAL 461 VGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAAL Sbjct 361 VGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAAL 420 Query 462 GLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 GLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 421 GLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 468 >gi|41406262|ref|NP_959098.1| hypothetical protein MAP0164 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394610|gb|AAS02481.1| hypothetical protein MAP_0164 [Mycobacterium avium subsp. paratuberculosis K-10] Length=509 Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/509 (85%), Positives = 462/509 (91%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +T+PHKVAFPARCAVNI Y+KHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDG+ALP Sbjct 1 MTSPHKVAFPARCAVNISYEKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGIALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRV GESFEPQYESLS+GLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVDGESFEPQYESLSSGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GR+GGDRMFAPVT LTAAHTA+A+IAMAV VV+ L LR RT TD P+PAA+AGGIG LL+ Sbjct 121 GREGGDRMFAPVTPLTAAHTAVAVIAMAVAVVVGLCLRARTFTDGPIPAAVAGGIGALLL 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 I LVV GWRERRDLFSGF WLAVV LAVA ACAPPG LGAAHALIG+VVV+LGAI IG Sbjct 181 IATLVVRSGWRERRDLFSGFAWLAVVALAVAGACAPPGVLGAAHALIGVVVVILGAIAIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 V R RWQTAVVTAVVTVCG+LAAVAAVRMFRP S+QVLAICVLVGLLVL+RMTP +ALW Sbjct 241 VTARNRWQTAVVTAVVTVCGVLAAVAAVRMFRPASVQVLAICVLVGLLVLVRMTPLIALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARR GMPVDTVAPVSE +++++DNELTDITARG AIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARREGMPVDTVAPVSEDESEEQDNELTDITARGAAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVG+CVGVS+VLPAAVWGVLTP +PWAWLAL+VAGL VG+FITQGRGFAAKYQAVA Sbjct 361 VNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWLALVVAGLVVGIFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVC GV+K+AL P TGLLWP + VA FAA GLA AL+VP RFRP IRL Sbjct 421 LVCGASAAVCTGVVKFALAAPHDAMTGLLWPVVAVATFAAFGLAAALLVPTMRFRPFIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 TVEW+EVLA I LLPAAAALGGLF W+RH Sbjct 481 TVEWVEVLAFIVLLPAAAALGGLFTWIRH 509 >gi|336457497|gb|EGO36504.1| type VII secretion integral membrane protein EccD [Mycobacterium avium subsp. paratuberculosis S397] Length=509 Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/509 (84%), Positives = 461/509 (91%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +T+ HKVAFPARCAVNI Y+KHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDG+ALP Sbjct 1 MTSLHKVAFPARCAVNISYEKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGIALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRV GESFEPQYESLS+GLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVDGESFEPQYESLSSGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GR+GGDRMFAPVT LTAAHTA+A+IAMAV VV+ L LR RT TD P+PAA+AGGIG LL+ Sbjct 121 GREGGDRMFAPVTPLTAAHTAVAVIAMAVAVVVGLCLRARTFTDGPIPAAVAGGIGALLL 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 I LVV GWRERRDLFSGF WLAVV LAVA ACAPPG LGAAHALIG+VVV+LGAI IG Sbjct 181 IATLVVRSGWRERRDLFSGFAWLAVVALAVAGACAPPGVLGAAHALIGVVVVILGAIAIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 V R RWQTAVVTAVVTVCG+LAAVAAVRMFRP S+QVLAICVLVGLLVL+RMTP +ALW Sbjct 241 VTARNRWQTAVVTAVVTVCGVLAAVAAVRMFRPASVQVLAICVLVGLLVLVRMTPLIALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARR GMPVDTVAPVSE +++++DN+LTDITARG AIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARREGMPVDTVAPVSEDESEEQDNKLTDITARGAAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVG+CVGVS+VLPAAVWGVLTP +PWAWLAL+VAGL VG+FITQGRGFAAKYQAVA Sbjct 361 VNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWLALVVAGLVVGIFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LVCGASAAVC GV+KYAL P TGLLWP + VA FAA GLA AL+VP RFRP IRL Sbjct 421 LVCGASAAVCTGVVKYALAAPHDAMTGLLWPVVAVATFAAFGLAAALLVPTMRFRPFIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 TVEW+EVLA I LLPAAAALGGLF W+RH Sbjct 481 TVEWVEVLAFIVLLPAAAALGGLFTWIRH 509 >gi|240168367|ref|ZP_04747026.1| putative transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=509 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/509 (87%), Positives = 470/509 (93%), Gaps = 0/509 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +T+PHKVAFPARCAVNICYDKHL SQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTSPHKVAFPARCAVNICYDKHLSSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL Sbjct 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLV 180 GRDGGDRMFAPVT LTAAHTA+AIIAMAVGVV+AL +RTRT TDS VPAA+AGGIG LLV Sbjct 121 GRDGGDRMFAPVTPLTAAHTAIAIIAMAVGVVVALAVRTRTFTDSLVPAAVAGGIGALLV 180 Query 181 IGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 +GA VVWWGWRERRDLFSGFGWLAV+LLAVA+ACAPPG+LGA H LIG+VVV+LGA+ IG Sbjct 181 VGAAVVWWGWRERRDLFSGFGWLAVLLLAVASACAPPGSLGAPHGLIGVVVVLLGAVAIG 240 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 V T+KRWQTAVVTAVVTV GILA VA +RMFRP S+QVLAI VLVGLLVL+RMTPT+ALW Sbjct 241 VVTQKRWQTAVVTAVVTVSGILAVVAVIRMFRPASVQVLAIWVLVGLLVLVRMTPTIALW 300 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 VARVRPPHFGSITGRDLFARR GMPVDTV+PVSEAD +DEDNELTDI+ARG AIAASARL Sbjct 301 VARVRPPHFGSITGRDLFARREGMPVDTVSPVSEADTEDEDNELTDISARGAAIAASARL 360 Query 361 VNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVA 420 VNAVQVG+C GVSLVLP AVWGVLTP PWAWLALLVAGL VG+FITQGRGFAAKYQAVA Sbjct 361 VNAVQVGVCTGVSLVLPVAVWGVLTPEGPWAWLALLVAGLAVGIFITQGRGFAAKYQAVA 420 Query 421 LVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRL 480 LV GASAAVCAGV+KYAL P+ VQ GL WP + V FAALGLA AL+VPA RFRP+IRL Sbjct 421 LVLGASAAVCAGVVKYALAAPRDVQAGLFWPVLAVVMFAALGLAAALLVPALRFRPLIRL 480 Query 481 TVEWLEVLAMIALLPAAAALGGLFAWLRH 509 VEWLEVLAMI LPAAAALGGLFAW+RH Sbjct 481 AVEWLEVLAMIVFLPAAAALGGLFAWIRH 509 >gi|296167003|ref|ZP_06849416.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897633|gb|EFG77226.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=476 Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/476 (86%), Positives = 440/476 (93%), Gaps = 0/476 (0%) Query 34 VEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 93 +EGFFEGMVELFDADLKRKGF+G+ LPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL Sbjct 1 MEGFFEGMVELFDADLKRKGFEGITLPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 60 Query 94 VPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVL 153 VPRVAGESFEPQYESLS+GLAAMGKWLGR+GGDRMFAPVT LTAAHTA+AIIAMA GVV+ Sbjct 61 VPRVAGESFEPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAIIAMAAGVVV 120 Query 154 ALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAA 213 ALTLR RT TD+PVPAA+AG +GVLLV+ VVWWGWRERRDLFSGFGWLAVVLLAVA A Sbjct 121 ALTLRARTFTDNPVPAAVAGAVGVLLVVATSVVWWGWRERRDLFSGFGWLAVVLLAVAGA 180 Query 214 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 273 CAPPG LGAAH LIGLV+V+LGAI IGV TRKRWQTA+VTAVVTVCGILAAVAAVRMFRP Sbjct 181 CAPPGTLGAAHGLIGLVIVILGAIAIGVMTRKRWQTAIVTAVVTVCGILAAVAAVRMFRP 240 Query 274 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVS 333 S QVLAICVLVGLL+L+RMTP +ALWVARVRPPHFGSITGRDLFARR GMPVDTVAPVS Sbjct 241 ASAQVLAICVLVGLLILVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVAPVS 300 Query 334 EADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWL 393 E +++DEDNELTDITARG A+AASARLVNAVQVG+CVGVS+VLPAAVWGVLTP +PWAWL Sbjct 301 EDESEDEDNELTDITARGAAVAASARLVNAVQVGVCVGVSIVLPAAVWGVLTPGRPWAWL 360 Query 394 ALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAI 453 AL+VAGL VG+FITQGRGFAAKYQAVAL CGA+AAVCAGV+KYA+ PK V +GLLWPA+ Sbjct 361 ALVVAGLVVGIFITQGRGFAAKYQAVALACGAAAAVCAGVVKYAIAEPKDVVSGLLWPAV 420 Query 454 FVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 VAAFAA GLA AL+VP RFRP IRLTVEW+EVLA I LLPAAAALGGLF W+RH Sbjct 421 AVAAFAACGLAAALLVPTVRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|289764079|ref|ZP_06523457.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711585|gb|EFD75601.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=471 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/471 (91%), Positives = 428/471 (91%), Gaps = 2/471 (0%) Query 41 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE 100 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE Sbjct 1 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE 60 Query 101 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 160 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR Sbjct 61 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 120 Query 161 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 220 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL Sbjct 121 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 180 Query 221 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA 280 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA Sbjct 181 GAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLA 240 Query 281 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE 340 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE Sbjct 241 ICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDE 300 Query 341 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGL 400 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPW WLALLVAGL Sbjct 301 DNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWPWLALLVAGL 360 Query 401 TVGLFITQGRGFAAKYQAVAL-VCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFA 459 TVG G + + + V G G L KGVQTGLLW + Sbjct 361 TVGPLHHPGPRVRRQIPSGRIGVRGVRPRCVPGCLSTPSTPRKGVQTGLLWACDLRRGLS 420 Query 460 A-LGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 GLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 421 PHWGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 471 >gi|254821257|ref|ZP_05226258.1| secretion protein Snm4 [Mycobacterium intracellulare ATCC 13950] Length=476 Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/476 (84%), Positives = 428/476 (90%), Gaps = 0/476 (0%) Query 34 VEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 93 +EGFFEGMVELFDADLKRKGFDG++LPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL Sbjct 1 MEGFFEGMVELFDADLKRKGFDGISLPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 60 Query 94 VPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVL 153 VPRV GESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVT LTAAHTA+A+IAMAV VV+ Sbjct 61 VPRVDGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTPLTAAHTAVAVIAMAVSVVV 120 Query 154 ALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAA 213 ALTLR RT TD P+PAA+AGG+GVLLVI LVV GWRERRDLFSGF WLAVV LA A A Sbjct 121 ALTLRARTFTDGPIPAAVAGGVGVLLVIATLVVRTGWRERRDLFSGFAWLAVVSLATAGA 180 Query 214 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 273 CAPPG LGAAH LIG VVV+LGA+ IGV R RWQTAVVTAVVTVCG+LA VAAVRMFRP Sbjct 181 CAPPGVLGAAHGLIGAVVVILGAVAIGVTARNRWQTAVVTAVVTVCGVLAVVAAVRMFRP 240 Query 274 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVS 333 S QVLA+CVLVGLLVL+RMTP +ALWVARVRPPHFGSITGRDLFARR GMPVDTV+PVS Sbjct 241 ASAQVLAVCVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVSPVS 300 Query 334 EADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWL 393 E +++DEDNELTDITARG AIAASARLVNAVQVG+CVGVS+VLPAAVWGVLTP +PWAWL Sbjct 301 EDESEDEDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWL 360 Query 394 ALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAI 453 AL+VAGL VG+FITQGRGFAAKYQAVALVCGASAAVCAGV+KYA+ GLLWP + Sbjct 361 ALVVAGLVVGIFITQGRGFAAKYQAVALVCGASAAVCAGVVKYAVAGAHDAMAGLLWPVV 420 Query 454 FVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 VA FA LGLA AL+VPA RFRP IRLTVEW+EVLA I LLPAAAALGGLF W+RH Sbjct 421 AVATFAGLGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|342860122|ref|ZP_08716774.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] gi|342132500|gb|EGT85729.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] Length=476 Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/476 (83%), Positives = 429/476 (91%), Gaps = 0/476 (0%) Query 34 VEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 93 +EGFFEGMVELFDADLKRKGFDG+ALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL Sbjct 1 MEGFFEGMVELFDADLKRKGFDGIALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 60 Query 94 VPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVL 153 VPRV GESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVT LTAAHTA+A+IAMAVGVV+ Sbjct 61 VPRVDGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTPLTAAHTAVAVIAMAVGVVV 120 Query 154 ALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAA 213 ALTLR RT TD P+PAA++G +G LL++ LVV GWRERRDLFSGF WLAV+ LA A A Sbjct 121 ALTLRARTFTDGPIPAAVSGAVGALLLVATLVVRSGWRERRDLFSGFAWLAVLSLATAGA 180 Query 214 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 273 CAPPG LGAAH LIG VVV+LGAI IGV R RWQTAVVTAVVTVCGILAAVAAVRMFRP Sbjct 181 CAPPGVLGAAHGLIGAVVVILGAIAIGVTARNRWQTAVVTAVVTVCGILAAVAAVRMFRP 240 Query 274 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVS 333 S QVLA+CVLVGLLVL+RM P +ALWVARVRPPHFGSITGRDLFARR GMPVDTV+PVS Sbjct 241 ASAQVLAVCVLVGLLVLVRMAPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVSPVS 300 Query 334 EADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWL 393 E +++DEDNELTDITARG AIAASARLVNAVQVG+CVGVS+VLPAAVWGVLTP + WAWL Sbjct 301 EDESEDEDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRQWAWL 360 Query 394 ALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAI 453 AL+VAGL VG+F+TQGRGFAAKYQA+AL CGASAAVCAGV+KYA+ PK TGL+WP + Sbjct 361 ALVVAGLVVGIFLTQGRGFAAKYQAIALACGASAAVCAGVVKYAVAAPKDAMTGLMWPVV 420 Query 454 FVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 VA FAALGLA AL+VPA RFRP IRLTVEW+EVLA I LLPAAAALGGLF W+RH Sbjct 421 AVATFAALGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|254773213|ref|ZP_05214729.1| secretion protein Snm4 [Mycobacterium avium subsp. avium ATCC 25291] Length=476 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/476 (85%), Positives = 432/476 (91%), Gaps = 0/476 (0%) Query 34 VEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 93 +EGFFEGMVELFDADLKRKGFDG+ALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL Sbjct 1 MEGFFEGMVELFDADLKRKGFDGIALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 60 Query 94 VPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVL 153 VPRVAGESFEPQYESLS+GLAAMGKWLGR+GGDRMFAPVT LTAAHTA+A+IAMAV VV+ Sbjct 61 VPRVAGESFEPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAVIAMAVAVVV 120 Query 154 ALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAA 213 L LR RT TD P+PAA+AGGIG LL+I LVV GWRERRDLFSGF WLAVV LAVA A Sbjct 121 GLCLRARTFTDGPIPAAVAGGIGALLLIATLVVRSGWRERRDLFSGFAWLAVVALAVAGA 180 Query 214 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 273 CAPPG LGAAHALIG+VVV+LGAI IGV R RWQTAVVTAVVTVCG+LAAVAAVRMFRP Sbjct 181 CAPPGVLGAAHALIGVVVVILGAIAIGVTARNRWQTAVVTAVVTVCGVLAAVAAVRMFRP 240 Query 274 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVS 333 S+QVLAICVLVGLLVL+RMTP +ALWVARVRPPHFGSITGRDLFARR GMPVDTVAPVS Sbjct 241 ASVQVLAICVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVAPVS 300 Query 334 EADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWL 393 E +++++DNELTDITARG AIAASARLVNAVQVG+CVGVS+VLPAAVWGVLTP +PWAWL Sbjct 301 EDESEEQDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWL 360 Query 394 ALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAI 453 AL+VAGL VG+FITQGRGFAAKYQAVALVCGASAAVCAGV+KYAL P TGLLWP + Sbjct 361 ALVVAGLVVGIFITQGRGFAAKYQAVALVCGASAAVCAGVVKYALAAPHDAMTGLLWPVV 420 Query 454 FVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 V FAA GLA AL+VPA RFRP IRLTVEW+EVLA I LLPAAAALGGLF W+RH Sbjct 421 AVTTFAAFGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|118464269|ref|YP_879451.1| secretion protein Snm4 [Mycobacterium avium 104] gi|118165556|gb|ABK66453.1| secretion protein Snm4 [Mycobacterium avium 104] Length=476 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/476 (85%), Positives = 431/476 (91%), Gaps = 0/476 (0%) Query 34 VEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 93 +EGFFEGMVELFDADLKRKGFDG+ALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL Sbjct 1 MEGFFEGMVELFDADLKRKGFDGIALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVL 60 Query 94 VPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVL 153 VPRV GESFEPQYESLS+GLAAMGKWLGR+GGDRMFAPVT LTAAHTA+A+IAMAV VV+ Sbjct 61 VPRVDGESFEPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAVIAMAVAVVV 120 Query 154 ALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAA 213 L LR RT TD P+PAA+AGGIG LL+I LVV GWRERRDLFSGF WLAVV LAVA A Sbjct 121 GLCLRARTFTDGPIPAAVAGGIGALLLIATLVVRSGWRERRDLFSGFAWLAVVALAVAGA 180 Query 214 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 273 CAPPG LGAAHALIG+VVV+LGAI IGV R RWQTAVVTAVVTVCG+LAAVAAVRMFRP Sbjct 181 CAPPGVLGAAHALIGVVVVILGAIAIGVTARNRWQTAVVTAVVTVCGVLAAVAAVRMFRP 240 Query 274 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVS 333 S+QVLAICVLVGLLVL+RMTP +ALWVARVRPPHFGSITGRDLFARR GMPVDTVAPVS Sbjct 241 ASVQVLAICVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVAPVS 300 Query 334 EADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWL 393 E +++++DNELTDITARG AIAASARLVNAVQVG+CVGVS+VLPAAVWGVLTP +PWAWL Sbjct 301 EDESEEQDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWL 360 Query 394 ALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAI 453 AL+VAGL VG+FITQGRGFAAKYQAVALVCGASAAVCAGV+KYAL P TGLLWP + Sbjct 361 ALVVAGLVVGIFITQGRGFAAKYQAVALVCGASAAVCAGVVKYALAAPHDAMTGLLWPVV 420 Query 454 FVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 V FAA GLA AL+VPA RFRP IRLTVEW+EVLA I LLPAAAALGGLF W+RH Sbjct 421 AVTTFAAFGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|31795061|ref|NP_857554.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|31620659|emb|CAD96103.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length=289 Score = 545 bits (1403), Expect = 1e-152, Method: Compositional matrix adjust. Identities = 287/288 (99%), Positives = 287/288 (99%), Gaps = 0/288 (0%) Query 222 AAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAI 281 AAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAI Sbjct 2 AAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAI 61 Query 282 CVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDED 341 CVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDED Sbjct 62 CVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDED 121 Query 342 NELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLT 401 NELT ITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLT Sbjct 122 NELTGITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLT 181 Query 402 VGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAAL 461 VGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAAL Sbjct 182 VGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAAL 241 Query 462 GLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 GLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 242 GLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 289 >gi|333988690|ref|YP_004521304.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333484658|gb|AEF34050.1| transmembrane protein [Mycobacterium sp. JDM601] Length=507 Score = 501 bits (1290), Expect = 1e-139, Method: Compositional matrix adjust. Identities = 312/508 (62%), Positives = 367/508 (73%), Gaps = 25/508 (4%) Query 25 SQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELG 84 SQVFPAGIPVE FFEGMVEL D DLK GFDGVALP GSYELHK+NGVRLDI +SLD+LG Sbjct 2 SQVFPAGIPVEEFFEGMVELLDEDLKHHGFDGVALPPGSYELHKVNGVRLDITRSLDDLG 61 Query 85 VQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGG------------------- 125 VQDGDTLVLVP V G+SFEPQYESLS+ LAA + LG Sbjct 62 VQDGDTLVLVPVVGGDSFEPQYESLSSALAATARRLGTQPEIQCSECGHKADEQTVTRLL 121 Query 126 ----DRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVI 181 DRMFAPVT++TAAHTA+ ++AM V V+ AL +R RT +DS PA + G+G LL + Sbjct 122 NVKVDRMFAPVTAVTAAHTAIGLLAMGVLVISALAIRARTFSDSWPPAVVLAGLGGLLTV 181 Query 182 GALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGV 241 GA V+ W R DLFSGFGWLAV+ L+ AA CA PG LGA H LIG+ V +GAI + V Sbjct 182 GAAVIRRNWPARADLFSGFGWLAVIALSGAALCAAPGPLGAPHLLIGVTVFAMGAIALSV 241 Query 242 ATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWV 301 R QTAV TAVVT GI VAAVRM+ PVS QV+ IC+L+GLL+L+RM+PT+ALWV Sbjct 242 LLRS--QTAVATAVVTASGIGGTVAAVRMWHPVSPQVIGICMLLGLLMLVRMSPTIALWV 299 Query 302 ARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARLV 361 ARVRPP+FGSITGRDLFARRA MP+DTV+PV+ D++D++++L DI+ARG AIAASARL+ Sbjct 300 ARVRPPYFGSITGRDLFARRANMPIDTVSPVAPDDSEDDEDDLIDISARGAAIAASARLI 359 Query 362 NAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVAL 421 NAVQVGMCV ++ LP AVW VL P A+ + GL GLFITQGRGFA + QA+AL Sbjct 360 NAVQVGMCVAIAAALPIAVWMVLAPGSARQRGAVALCGLVAGLFITQGRGFAGRVQAIAL 419 Query 422 VCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLT 481 V GA AAV G+ KYAL P G LWPA VA FA LGLA L+VPAT+F P IRL Sbjct 420 VGGACAAVLVGITKYALAAPGYTAGGFLWPAAAVAVFAGLGLAAGLLVPATKFVPWIRLA 479 Query 482 VEWLEVLAMIALLPAAAALGGLFAWLRH 509 VEWLEVLA I + A LGGLF W+R+ Sbjct 480 VEWLEVLAFIVVGVLGAWLGGLFVWVRN 507 >gi|289760058|ref|ZP_06519436.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|289715622|gb|EFD79634.1| transmembrane protein [Mycobacterium tuberculosis T85] Length=220 Score = 426 bits (1095), Expect = 5e-117, Method: Compositional matrix adjust. Identities = 219/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%) Query 290 LIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITA 349 +IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITA Sbjct 1 MIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITA 60 Query 350 RGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQG 409 RGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQG Sbjct 61 RGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQG 120 Query 410 RGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVV 469 RGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVV Sbjct 121 RGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVV 180 Query 470 PATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 PATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 181 PATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 220 >gi|289748423|ref|ZP_06507801.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289689010|gb|EFD56439.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=217 Score = 421 bits (1083), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 217/217 (100%), Positives = 217/217 (100%), Gaps = 0/217 (0%) Query 293 MTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGT 352 MTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGT Sbjct 1 MTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGT 60 Query 353 AIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGF 412 AIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGF Sbjct 61 AIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGF 120 Query 413 AAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPAT 472 AAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPAT Sbjct 121 AAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPAT 180 Query 473 RFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 RFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH Sbjct 181 RFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 217 >gi|289760059|ref|ZP_06519437.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|289715623|gb|EFD79635.1| transmembrane protein [Mycobacterium tuberculosis T85] Length=187 Score = 370 bits (949), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%) Query 41 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE 100 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE Sbjct 1 MVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGE 60 Query 101 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 160 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR Sbjct 61 SFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTR 120 Query 161 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 220 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL Sbjct 121 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL 180 Query 221 GAAHALI 227 GAAHALI Sbjct 181 GAAHALI 187 >gi|341603818|emb|CCC66499.1| probable conserved transmembrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=217 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 155/191 (82%), Positives = 164/191 (86%), Gaps = 6/191 (3%) Query 322 AGMPVDTVAPVSEADADDEDNELTDITARGTAIAASA---RLVNAVQVGMCVGVSLVLPA 378 AG+PV+ E + D +L G A+ A + +N V++GMCVGVSLVLPA Sbjct 30 AGIPVEGF---FEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLGMCVGVSLVLPA 86 Query 379 AVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYAL 438 AVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYAL Sbjct 87 AVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYAL 146 Query 439 DTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAA 498 DTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAA Sbjct 147 DTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAA 206 Query 499 ALGGLFAWLRH 509 ALGGLFAWLRH Sbjct 207 ALGGLFAWLRH 217 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 73/76 (97%), Positives = 75/76 (99%), Gaps = 0/76 (0%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 +TAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP Sbjct 1 MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALP 60 Query 61 AGSYELHKINGVRLDI 76 AGSYELHKINGVRL + Sbjct 61 AGSYELHKINGVRLGM 76 >gi|119855165|ref|YP_935770.1| hypothetical protein Mkms_5780 [Mycobacterium sp. KMS] gi|119697883|gb|ABL94955.1| protein of unknown function DUF571 [Mycobacterium sp. KMS] Length=505 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 168/511 (33%), Positives = 235/511 (46%), Gaps = 27/511 (5%) Query 3 APHKVAFPARCAVNICY-DKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALPA 61 AP P+ C V++ D H V PA +P+ + + + L+ KG D LP Sbjct 15 APGGPLVPSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNRLLRSKGED--ELPV 72 Query 62 GSYELHKINGV-RLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 G+YE + G+ RL SL GV DGD L VP + P E++ST LA +W Sbjct 73 GTYEFARAVGMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIENVSTALA---RW- 128 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDS--PVPAAMAGGIGVL 178 F PV++ A A A+ A A+ L R R PA A G+L Sbjct 129 ----AHAHFPPVSTHDAVVVAGALTAAALIGAALLVWRLRWAAQPFWLSPAIFAVTAGIL 184 Query 179 LVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGAL-GAAHALIGLVVVVLGAI 237 L L G R + G W A+V L +A A AP G GA HA + VV +G + Sbjct 185 LATAMLSARAG--ASRVIVDGAAWAALVGLVLAGASAPYGNQPGAPHAFLAAVVATVGVL 242 Query 238 TIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTV 297 + T + W A A+VTV + A RMF V Q +AI +L+ +L+ R + Sbjct 243 LLARMTGRHWTAA--AAIVTVTTAVIAAGLTRMFFDVPAQRIAIVMLMAVLIASRAATAI 300 Query 298 ALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAAS 357 LW+++V F SITGRD+F R G P DT+ PV A D+T RG +A Sbjct 301 GLWMSKVPRQSFESITGRDMFTRAPGQPEDTLTPVESAA--------HDVTLRGEQVAEV 352 Query 358 ARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQ 417 AR N V G +G+++V AA W + P W +++V +T I + RG + Sbjct 353 ARRSNRVLTGTLLGIAVVQLAASWWAIAPGSGSQWPSIVVVVVTALCLILRARGLRHRRH 412 Query 418 AVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPI 477 AV +V G++ ++ A L Y L P + A V A A GL V+P+ F Sbjct 413 AVTIVSGSALSLMAIPLHYGLSAPASATVSVAVSAAAVLAVAVAGLLAGAVIPSRSFSEP 472 Query 478 IRLTVEWLEVLAMIALLPAAAALGGLFAWLR 508 IR VEWLE L ++P AA GL ++R Sbjct 473 IRQVVEWLEYLGYALIVPFAAWAIGLLQYIR 503 >gi|296165447|ref|ZP_06847983.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899187|gb|EFG78657.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=500 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 137/479 (29%), Positives = 213/479 (45%), Gaps = 22/479 (4%) Query 10 PARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKI 69 P V++ + + PA +P+ E + + LK G LP G++ + Sbjct 18 PPSSRVSLLVGDNQIDLLLPAAVPLAKLVEPTRDTINRRLKSIGAK--ELPGGAFVFARA 75 Query 70 NGVRLDINK-SLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRM 128 G+ + K SL GV D + L +P + + +EP E++S AA+ KW + Sbjct 76 AGMTMLSGKLSLAAQGVNDAELLAFIPAASAQRYEPNIENVS---AAIAKW-----AKQH 127 Query 129 FAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWW 188 F VT+L AA A+A+ +A+ L R R + A G+ L+V GA V+ Sbjct 128 FPAVTALDAARVAVALSLVALSAAALLVWRLRWASAGGWLAPTIFGVTALVVAGAAVLAS 187 Query 189 GWRERRDLFSGFGWLAVVLLAVAAACAPPGAL-GAAHALIGLVVVVLGAITIGVATRKRW 247 R + + W + L A PPGA GA HA++ V ++ A +G T + W Sbjct 188 RLGADRFITAATSWAVIAALVATGATTPPGAHPGAPHAVLATGVALIAAAALGKLTGRYW 247 Query 248 QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPP 307 VT +VTV AA RMF V Q +A+ VLVG+L + P + +ARV Sbjct 248 --VAVTTMVTVSAAGLGCAATRMFFAVPGQRIAVVVLVGVLTVSLAAPGIGRRLARVPRQ 305 Query 308 HFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARLVNAVQVG 367 F SITG+D++ R P DT++PV+++ D+T G + A N V +G Sbjct 306 SFESITGKDMYERSPHDPEDTISPVADSP--------RDVTLTGEQVGEVALRSNRVLMG 357 Query 368 MCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASA 427 + +G +L AA W + P W + V+ + + + R F + A+ LV GA+ Sbjct 358 LLLGTALTQIAASWAAIHPGVGTQWTFVAVSSCIALITVLRARAFRDRRHAITLVVGAAL 417 Query 428 AVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 486 ++ A Y L G +L A V A L +VP F +R VE+ E Sbjct 418 SLFAIPTHYGLAANPGSTAAVLTAAGAVVGIALAALLAGAIVPTHMFSEPVREIVEYAE 476 >gi|296164783|ref|ZP_06847344.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899860|gb|EFG79305.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=503 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 135/498 (28%), Positives = 220/498 (45%), Gaps = 52/498 (10%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV E ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 39 ANAPVSVMTEPLLKVVNSRLRELGETPLEATGRGRWALCLVDGTPLRATQSLTEQDVYDG 98 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + E E +ST +AA + FA + + A +++A Sbjct 99 DRLWIRFIQDTEHRSQVIEHISTAVAA--------NLSKRFAAIDPVMAVQVGASMVAAG 150 Query 149 VGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSGFG 201 V L L R +S +P A + I ++++ +L++ R +D L SG Sbjct 151 VTAASGLLLWYRWHHNSWLPTAYSAVIALVVLGVSLMLLMRARTDQDRRIADIMLLSGLA 210 Query 202 WLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRW---QTAVVTAVVTV 258 L V+AA APPG LG+ HA++G G +TI R+ + + TA++TV Sbjct 211 -----PLTVSAAAAPPGGLGSPHAVLGF-----GVLTIATMLALRFTGRRLGLYTALITV 260 Query 259 CGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLF 318 + A A RM S L V++ +++ P ++ +A +R P F S T R +F Sbjct 261 SVVTAIAALARMVAMTSAVTLLTSVVLVCVLVYHTAPALSRRLAGIRLPVFPSATSRWVF 320 Query 319 ARRAGMPVDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVS 373 R +P V PV E A D + A + G+ VG+ Sbjct 321 EARPDLPTTVVRSDGGPPVLEGPASVRD------------VLVQAERARSFLTGLLVGLG 368 Query 374 LVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGV 433 +++ ++ + P WL LL+AG + G + +GR + ++QA+ L A V A V Sbjct 369 VLMVVSLTALSDPHTGQRWLPLLLAGFSAGFLMLRGRSYVDRWQAITLAVTAVLIVGAVV 428 Query 434 LKYA--LDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMI 491 +YA L +P V A + A GL A VVP T + P+ R VEW+E L ++ Sbjct 429 ARYALVLQSPLAVSIS----AAILVLLPAAGLTSAAVVPNTIYSPLFRKFVEWIEYLCLM 484 Query 492 ALLPAAAALGGLFAWLRH 509 + P A L ++A +R+ Sbjct 485 PIFPLALWLMNVYAAIRY 502 >gi|183982684|ref|YP_001850975.1| hypothetical protein MMAR_2677 [Mycobacterium marinum M] gi|183176010|gb|ACC41120.1| conserved membrane protein [Mycobacterium marinum M] Length=503 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 136/525 (26%), Positives = 217/525 (42%), Gaps = 106/525 (20%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV + ++++ ++ L+ G + A G + L I+G L +SL E V DG Sbjct 39 ANAPVSVMTDPLLKVVNSRLRELGESTLEAAGRGRWALCLIDGSPLRATQSLTEQDVYDG 98 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + F P E H + I ++ Sbjct 99 DRLWI-------RFIPDTE-------------------------------HRSQVIEHIS 120 Query 149 VGVVLALTLRTRTITDSPVPAAMAG----GIGVLLVIGALVVWWGWRERRDLFSGFGWLA 204 V L+ R +I PV A G G GV+L G L WW W L + F + Sbjct 121 TAVASNLSKRFASI--DPVVAVQVGAGMVGTGVILASGVLG-WWRWHHNTWLTTIFASVI 177 Query 205 VVL-------------------------------LAVAAACAPPGALGAAHALIGLVVVV 233 VL L VAAA APPG++G+ A++G Sbjct 178 AVLVLMVAMMLLMRATTDADRRVADIMLVSGLAPLTVAAASAPPGSVGSPQAVLGF---- 233 Query 234 LGAITIGVATRKRW---QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVL 290 G ++I A R+ + A+ TA+VT+CG+ + RM S L +L+ +V+ Sbjct 234 -GVLSIAAALALRFTGRRLAIYTAIVTICGLTTLASLSRMVAATSAVTLFATMLLICVVM 292 Query 291 IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVA------PVSEADADDEDNEL 344 +P ++ ++ +R P F S T R +F R +P TVA PV E A D L Sbjct 293 YHASPALSRRLSGIRLPVFPSATSRWVFEARPDLPT-TVAVAAGGPPVLEGPASVRDVVL 351 Query 345 TDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGL 404 AR + G+ VG+ +++ ++ + P WL L++AG T G Sbjct 352 QAERAR------------SFLSGLLVGLGVLMVVSLTSLCNPHTSERWLPLMLAGFTSGF 399 Query 405 FITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLA 464 + +GR + ++Q++ L A V A ++YAL + ++ A + A G+ Sbjct 400 LMLRGRSYVDRWQSITLAVTAVIVVAAVSVRYALVLSSPLSVSIV--ASLLVLLPAAGMT 457 Query 465 VALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 A VVP T + P+ R VEW E L ++ + P A L ++A +R+ Sbjct 458 AAAVVPNTIYSPLFRKFVEWTEYLCLMPIFPLAFWLMNVYAAIRY 502 >gi|118618463|ref|YP_906795.1| hypothetical protein MUL_3080 [Mycobacterium ulcerans Agy99] gi|118570573|gb|ABL05324.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=503 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 136/525 (26%), Positives = 216/525 (42%), Gaps = 106/525 (20%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV + ++++ ++ L+ G + A G + L I+G L +SL E V DG Sbjct 39 ANAPVSVMTDPLLKVVNSRLRELGESTLEAAGRGRWALCLIDGSPLRATQSLTEQDVYDG 98 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + F P E H + I ++ Sbjct 99 DRLWI-------RFIPDTE-------------------------------HRSQVIEHIS 120 Query 149 VGVVLALTLRTRTITDSPVPAAMAG----GIGVLLVIGALVVWWGWRERRDLFSGFGWLA 204 V L+ R +I PV A G G GV+L G L WW W L + F + Sbjct 121 TAVASNLSKRFASI--DPVVAVQVGAGMVGTGVILASGVLG-WWRWHHNTWLTTIFASVI 177 Query 205 VVL-------------------------------LAVAAACAPPGALGAAHALIGLVVVV 233 VL L VAAA APPG++G+ A +G Sbjct 178 AVLVLMVAMMLLMRATTDADRRVADIMLVSGLAPLTVAAASAPPGSVGSPQAALGF---- 233 Query 234 LGAITIGVATRKRW---QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVL 290 G ++I A R+ + A+ TA+VT+CG+ + RM S L +L+ +V+ Sbjct 234 -GVLSIAAALALRFTGRRLAIYTAIVTICGLTTLASLSRMVAATSAVTLFATMLLICVVM 292 Query 291 IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVA------PVSEADADDEDNEL 344 +P ++ ++ +R P F S T R +F R +P TVA PV E A D L Sbjct 293 YHASPALSRRLSGIRLPVFPSATSRWVFEARPDLPT-TVAVAAGGPPVLEGPASVRDVVL 351 Query 345 TDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGL 404 AR + G+ VG+ +++ ++ + P WL L++AG T G Sbjct 352 QAERAR------------SFLSGLLVGLGVLMVVSLTSLCNPHTSERWLPLMLAGFTSGF 399 Query 405 FITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLA 464 + +GR + ++Q++ L A V A ++YAL + ++ A + A G+ Sbjct 400 LMLRGRSYVDRWQSITLAVTAVIVVAAVSVRYALVLSSPLSVSIV--ASLLVLLPAAGMT 457 Query 465 VALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 A VVP T + P+ R VEW E L ++ + P A L ++A +R+ Sbjct 458 AAAVVPNTIYSPLFRKFVEWTEYLCLMPIFPLAFWLMNVYAAIRY 502 >gi|342861301|ref|ZP_08717949.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] gi|342131201|gb|EGT84482.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] Length=478 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 137/487 (29%), Positives = 224/487 (46%), Gaps = 36/487 (7%) Query 33 PVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDGDTL 91 PV E ++++ ++ L+ G + A G + L ++G L +SL E V DGD L Sbjct 17 PVSVMTEPLLKVVNSRLRELGETPLEASGRGRWALCLVDGSPLRATQSLSEQDVYDGDRL 76 Query 92 VLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGV 151 + F P E S + + + D R FA + + A ++A+ V Sbjct 77 WI-------RFIPDTEHRSQVIEHISTAVAADLSKR-FAAIDPVIAVQVGATMVAVGVTT 128 Query 152 VLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWW--GWRERRDLFSGFGWLAVVLLA 209 L R +S +P AG IG + + AL++ ++ R + ++V +A Sbjct 129 AAGLLGWWRWHHNSWLPTVYAGVIGAVALGVALLLLMRAHTQQERRVADTMLLSSLVPIA 188 Query 210 VAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVR 269 +AAA APPG +G+ HA++G V+ + AI T +R A+ TA+VTV I A A R Sbjct 189 IAAASAPPGGVGSPHAVLGFGVLTIAAILALRFTGRR--LAIYTAMVTVSLIAAVAALAR 246 Query 270 MFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV 329 M S L CV++ +++ + P ++ +A +R P F S T R +F R +P V Sbjct 247 MVAMTSAVTLFTCVVLVSVMVYQSAPAISRRLAGIRLPVFPSATSRWVFEARPDLPTTVV 306 Query 330 -----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVL 384 PV E A D + A + G+ +G+ +++ ++ + Sbjct 307 RSDGGPPVLEGPASVRD------------VLTQAERARSFLSGLLIGLGVLMIVSLTALS 354 Query 385 TPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYA--LDTPK 442 P WL LL+AG + G + +GR + ++QA+ L A V A VL+YA L +P Sbjct 355 DPHTGQRWLPLLLAGFSAGFLMLRGRSYVDRWQAITLAGTAVLIVGAVVLRYALVLQSPL 414 Query 443 GVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGG 502 V A + A GL A VVP T + P+ R VEW+E L ++ + P A L Sbjct 415 AVSIS----AAILVLLPAAGLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALWLMN 470 Query 503 LFAWLRH 509 ++A +R+ Sbjct 471 VYAAIRY 477 >gi|333990538|ref|YP_004523152.1| hypothetical protein JDM601_1898 [Mycobacterium sp. JDM601] gi|333486506|gb|AEF35898.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=504 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 126/452 (28%), Positives = 208/452 (47%), Gaps = 25/452 (5%) Query 62 GSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWLG 121 G + L ++G L N+SL E V DGD L L E P E +ST ++ Sbjct 73 GRWVLCLVDGTALRPNQSLTEQDVYDGDRLWLRFIEDRERRSPVIEHISTAVSV------ 126 Query 122 RDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVI 181 + FAPV ++TA ++ +A+ V + L R D+ + A + G+ +L++I Sbjct 127 --NLAKRFAPVNAVTAVRVGVSTLALGVLLATGLLAAWRVQHDNWLTAGFSAGLALLVLI 184 Query 182 GALVVWWGWRERRDLFSGFGWLA--VVLLAVAAACAPPGALGAAHALIGLVVVVLGAITI 239 A ++ R D ++G L+ +V L VAAA A PG +GAA A +G V + A+++ Sbjct 185 AAALILIQARNASDRWAGDMLLSSGLVPLVVAAAAAVPGEVGAAQAALGFGVAGIAALSV 244 Query 240 GVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVAL 299 T + Q A +AV + + +RM L CV + ++ + P+++ Sbjct 245 IRLTGR--QLAAYSAVTVISAAVMFAGVLRMLFLTGAVTLMACVYLACVLAYQWAPSLSR 302 Query 300 WVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASAR 359 W+A +R P F S T R +F R +P V+ A + + + ++ R A Sbjct 303 WLAGLRLPVFPSATSRWVFEARPDLPTTVVSKPGAAPSLEGPESVREVVLR-------AE 355 Query 360 LVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAV 419 + G+ G+ +++ V G+ P +WL LL+AGLT G + +GR F ++QAV Sbjct 356 RARSFLTGLLTGLGVLIAVCVTGLCDPHSDRSWLPLLLAGLTAGFLVLRGRSFRDRWQAV 415 Query 420 ALVCGA--SAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPI 477 + A L TP T L+ A + GL A++VP T + P+ Sbjct 416 TVTLTGLVIVAAVVVRFVVVLWTP----TTLVVGAAVLVLVPMFGLLSAVIVPNTIYSPL 471 Query 478 IRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 R VEW+E L ++ L P A L + +R+ Sbjct 472 FRKFVEWIEYLCLMPLFPLALWLMNTYEAIRY 503 >gi|254775395|ref|ZP_05216911.1| secretion protein Snm4 [Mycobacterium avium subsp. avium ATCC 25291] Length=478 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 137/490 (28%), Positives = 224/490 (46%), Gaps = 36/490 (7%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV E ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 14 ANAPVSVMTEPLLKVVNSRLRELGETPLEATGRGRWALCLVDGSPLRATQSLSEQDVYDG 73 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + E E +ST +AA + FA + + A ++A+ Sbjct 74 DRLWIRFIPDTEHRSQVIEHISTAVAA--------NLSKRFAAIDPVVAVQVGATMVAVG 125 Query 149 VGVVLALTLRTRTITDSPVPAAMAGGIGVLL--VIGALVVWWGWRERRDLFSGFGWLAVV 206 V L R +S +P AG IGVL+ V L++ ++ R + ++ Sbjct 126 VTAASGLLGWWRWHHNSWLPTVYAGVIGVLMLGVSVLLLMRATTQQERRVGDTLLLSSLA 185 Query 207 LLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVA 266 ++VAAA APPG +G+ A++G V+ + A+ T +R A+ TA+VTV I A A Sbjct 186 PVSVAAAAAPPGGVGSPQAVLGFGVLTIAAVLALRFTGRR--LAIYTAIVTVSAIAAVAA 243 Query 267 AVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPV 326 RM L CV++ +++ + P ++ +A +R P F S T R +F R +P Sbjct 244 LARMVAMTGAVTLLTCVVLVSVLIYQSAPAISRRLAGIRLPVFPSATSRWVFEARPDLPT 303 Query 327 DTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVW 381 V PV E A D + A + G+ +G+ +++ ++ Sbjct 304 TVVRSDGGPPVLEGPASVRD------------VLTQAERARSFLSGLLIGLGVLMVVSLT 351 Query 382 GVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYA--LD 439 + PR WL +L+AG G + +GR + ++QA+ L A V A V++YA L Sbjct 352 ALSDPRTGQRWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTAVLIVGAVVVRYALVLQ 411 Query 440 TPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAA 499 +P V AI V A GL A VVP T + P+ R VEW+E L ++ + P A Sbjct 412 SPLAVSIS---AAILVLVPVA-GLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALW 467 Query 500 LGGLFAWLRH 509 L ++A +R+ Sbjct 468 LMNVYAAIRY 477 >gi|254820296|ref|ZP_05225297.1| secretion protein Snm4 [Mycobacterium intracellulare ATCC 13950] Length=478 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 135/489 (28%), Positives = 227/489 (47%), Gaps = 34/489 (6%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 14 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGSPLRATQSLSEQDVYDG 73 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + E E +ST +AA + FA + + A +++A+ Sbjct 74 DRLWIRFIPDTEHRSQVIEHISTAVAA--------NLSKRFAAIDPVVAVQVGASMVAIG 125 Query 149 VGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWW---GWRERRDLFSGFGWLAV 205 V L R +S +P AG IG L++ +L++ +ERR + ++ Sbjct 126 VTAATGLLGWWRWHHNSWLPTVYAGVIGALMLGVSLLLLMRATTLQERR-VADTMLLSSL 184 Query 206 VLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAV 265 ++VAAA APPG +G+ HA++G V+ + AI T +R ++ TA+VTV I A Sbjct 185 APVSVAAAAAPPGGVGSPHAVLGFGVLTIAAILALRFTGRR--LSIYTAIVTVSSIAAVA 242 Query 266 AAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMP 325 A RM S L CV++ +++ + P ++ +A +R P F S T R +F R +P Sbjct 243 ALARMVAMTSAVTLLTCVVLVSVLIYQSAPAISRRLAGIRLPVFPSATSRWVFEARPDLP 302 Query 326 VDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAV 380 V PV E A D + A + G+ +G+ +++ ++ Sbjct 303 TTVVRNDGGPPVLEGPASVRD------------VLTQAERARSFLSGLLIGLGVLMVVSL 350 Query 381 WGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDT 440 + P WL +L+AG + G + +GR + ++QA+ L V A V++YAL Sbjct 351 TALSDPHTGQRWLPVLLAGFSAGFLLLRGRSYVDRWQAITLAGTGVLIVGAVVVRYALVL 410 Query 441 PKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAAL 500 + + AI V AA GL A VVP T + P+ R VEW+E L ++ + P A L Sbjct 411 QSSLAVSIC-AAILVLVPAA-GLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALWL 468 Query 501 GGLFAWLRH 509 ++A +R+ Sbjct 469 MNVYAAIRY 477 >gi|118466119|ref|YP_882105.1| secretion protein Snm4 [Mycobacterium avium 104] gi|118167406|gb|ABK68303.1| secretion protein Snm4 [Mycobacterium avium 104] Length=503 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 137/490 (28%), Positives = 224/490 (46%), Gaps = 36/490 (7%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV E ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 39 ANAPVSVMTEPLLKVVNSRLRELGETPLEATGRGRWALCLVDGSPLRATQSLSEQDVYDG 98 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + E E +ST +AA + FA + + A ++A+ Sbjct 99 DRLWIRFIPDTEHRSQVIEHISTAVAA--------NLSKRFAAIDPVVAVQVGATMVAVG 150 Query 149 VGVVLALTLRTRTITDSPVPAAMAGGIGVLL--VIGALVVWWGWRERRDLFSGFGWLAVV 206 V L R +S +P AG IGVL+ V L++ ++ R + ++ Sbjct 151 VTAASGLLGWWRWHHNSWLPTVYAGVIGVLMLGVSVLLLMRATTQQERRVGDTLLLSSLA 210 Query 207 LLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVA 266 ++VAAA APPG +G+ A++G V+ + A+ T +R A+ TA+VTV I A A Sbjct 211 PVSVAAAAAPPGGVGSPQAVLGFGVLTIAAVLALRFTGRR--LAIYTAIVTVSAIAALAA 268 Query 267 AVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPV 326 RM L CV++ +++ + P ++ +A +R P F S T R +F R +P Sbjct 269 LARMVAMTGAVTLLTCVVLVSVLIYQSAPAISRRLAGIRLPVFPSATSRWVFEARPDLPT 328 Query 327 DTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVW 381 V PV E A D + A + G+ +G+ +++ ++ Sbjct 329 TVVRSDGGPPVLEGPASVRD------------VLTQAERARSFLSGLLIGLGVLMVVSLT 376 Query 382 GVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYA--LD 439 + PR WL +L+AG G + +GR + ++QA+ L A V A V++YA L Sbjct 377 ALSDPRTGQRWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTAVLIVGAVVVRYALVLQ 436 Query 440 TPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAA 499 +P V AI V A GL A VVP T + P+ R VEW+E L ++ + P A Sbjct 437 SPLAVSIS---AAILVLVPVA-GLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALW 492 Query 500 LGGLFAWLRH 509 L ++A +R+ Sbjct 493 LMNVYAAIRY 502 >gi|336457559|gb|EGO36564.1| type VII secretion integral membrane protein EccD [Mycobacterium avium subsp. paratuberculosis S397] Length=503 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 136/490 (28%), Positives = 223/490 (46%), Gaps = 36/490 (7%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV E ++++ ++ L+ G + A + L ++G L +SL E V DG Sbjct 39 ANAPVSVMTEPLLKVVNSRLRELGETPLEATGRVRWALCLVDGSPLRATQSLSEQDVYDG 98 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + E E +ST +AA + FA + + A ++A+ Sbjct 99 DRLWIRFIPDTEHRSQVIEHISTAVAA--------NLSKRFAAIDPVVAVQVGATMVAVG 150 Query 149 VGVVLALTLRTRTITDSPVPAAMAGGIGVLL--VIGALVVWWGWRERRDLFSGFGWLAVV 206 V L R +S +P AG IGVL+ V L++ ++ R + ++ Sbjct 151 VTAASGLLGWWRWHHNSWLPTVYAGVIGVLMLGVSVLLLMRATTQQERRVGDTLLLSSLA 210 Query 207 LLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVA 266 ++VAAA APPG +G+ A++G V+ + A+ T +R A+ TA+VTV I A A Sbjct 211 PVSVAAAAAPPGGVGSPQAVLGFGVLTIAAVLALRFTGRR--LAIYTAIVTVSAIAALAA 268 Query 267 AVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPV 326 RM L CV++ +++ + P ++ +A +R P F S T R +F R +P Sbjct 269 LARMVAMTGAVTLLTCVVLVSVLIYQSAPAISRRLAGIRLPVFPSATSRWVFEARPDLPT 328 Query 327 DTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVW 381 V PV E A D + A + G+ +G+ +++ ++ Sbjct 329 TVVRSDGGPPVLEGPASVRD------------VLTQAERARSFLSGLLIGLGVLMVVSLT 376 Query 382 GVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYA--LD 439 + PR WL +L+AG G + +GR + ++QA+ L A V A V++YA L Sbjct 377 ALSDPRTGQRWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTAVLIVGAVVVRYALVLQ 436 Query 440 TPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAA 499 +P V AI V A GL A VVP T + P+ R VEW+E L ++ + P A Sbjct 437 SPLAVSIS---AAILVLVPVA-GLTSAAVVPNTVYSPLFRKLVEWIEYLCLMPIFPLALW 492 Query 500 LGGLFAWLRH 509 L ++A +R+ Sbjct 493 LMNVYAAIRY 502 >gi|41407608|ref|NP_960444.1| hypothetical protein MAP1510 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395961|gb|AAS03827.1| hypothetical protein MAP_1510 [Mycobacterium avium subsp. paratuberculosis K-10] Length=503 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 136/490 (28%), Positives = 223/490 (46%), Gaps = 36/490 (7%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV E ++++ ++ L+ G + A + L ++G L +SL E V DG Sbjct 39 ANAPVSVMTEPLLKVVNSRLRELGETPLEATGRVRWALCLVDGSPLRATQSLSEQDVYDG 98 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + E E +ST +AA + FA + + A ++A+ Sbjct 99 DRLWIRFIPDTEHRSQVIEHISTAVAA--------NLSKRFAAIDPVVAVQVGATMVAVG 150 Query 149 VGVVLALTLRTRTITDSPVPAAMAGGIGVLL--VIGALVVWWGWRERRDLFSGFGWLAVV 206 V L R +S +P AG IGVL+ V L++ ++ R + ++ Sbjct 151 VTAASGLLGWWRWHHNSWLPTVYAGVIGVLMLGVSVLLLMRATTQQERRVGDTLLLSSLA 210 Query 207 LLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVA 266 ++VAAA APPG +G+ A++G V+ + A+ T +R A+ TA+VTV I A A Sbjct 211 PVSVAAAAAPPGGVGSPQAVLGFGVLTIAAVLALRFTGRR--LAIYTAIVTVSAIAALAA 268 Query 267 AVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPV 326 RM L CV++ +++ + P ++ +A +R P F S T R +F R +P Sbjct 269 LARMVAMTGAVTLLTCVVLVSVLIYQSAPAISRRLAGIRLPVFPSATSRWVFEARPDLPT 328 Query 327 DTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVW 381 V PV E A D + A + G+ +G+ +++ ++ Sbjct 329 TVVRSDGGPPVLEGPASVRD------------VLTQAERARSFLSGLLIGLGVLMVVSLT 376 Query 382 GVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYA--LD 439 + PR WL +L+AG G + +GR + ++QA+ L A V A V++YA L Sbjct 377 ALSDPRTGQRWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTAVLIVGAVVVRYALVLQ 436 Query 440 TPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAA 499 +P V AI V A GL A VVP T + P+ R VEW+E L ++ + P A Sbjct 437 SPLAVSIS---AAILVLVPVA-GLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALW 492 Query 500 LGGLFAWLRH 509 L ++A +R+ Sbjct 493 LMNVYAAIRY 502 >gi|296164030|ref|ZP_06846653.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900578|gb|EFG79961.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=498 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 124/444 (28%), Positives = 194/444 (44%), Gaps = 35/444 (7%) Query 2 TAPHKVAFPARCAVNICY-DKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKG---FDGV 57 +A P C V++ D L V PAG+ + E ++ +A LK +G D Sbjct 6 SAQQAPEVPRLCKVHLLVGDDTLIDYVLPAGVALIAVIEDLIPRVNAILKDRGRAPLDDT 65 Query 58 ALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMG 117 +++L + + LD +SLD+ V DGD L L+P A E F P E +ST LA Sbjct 66 L----TFQLCRADATPLDPQRSLDDSRVYDGDLLCLLPTDATERFAPVIEEVSTALARSA 121 Query 118 KWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGV 177 + + FA V A A + A V + + +PAA++ G+ Sbjct 122 R--------QQFATVDVTVARRVAGGLFAALVAWAEVMLAQLWWQQHGWLPAAVSWGLAA 173 Query 178 LLVIGALVVWWGWRERRDLFSGF-GWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGA 236 + ++ A E+R + F W A++ AA + PG G H + V+ G Sbjct 174 VFLVSARAATRARDEQRRRSADFLVWSALICAGAGAAMSVPGPPGGWHVVAATATVLAGV 233 Query 237 ITIGVATRKRWQTAVVTAVVTVCGILA-AVAAVRM--FRPVSMQVLAICVLVGLLVLIRM 293 + + T R+ T V A + V G+ A AVAA+ +R + LA+ LV LVL+ Sbjct 234 AALTMLT-GRYLT--VFAGMAVVGLSAGAVAAIHASGWRVLPAH-LAVVFLVADLVLVTF 289 Query 294 TPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTA 353 ++ + A V P F S+T R +F R G ++TV+PV E ++ ++ RGTA Sbjct 290 ATSIGIVGAGVPGPWFPSVTNRGVFETREGAALNTVSPV-ERPGNETVEQIATWARRGTA 348 Query 354 IAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFA 413 I G+ G ++VL AA + P W L +F+ + R F Sbjct 349 IV----------TGLLAGGAVVLVAAARYAVMPETGGGWRFLAFTLGICAIFLLRARSFV 398 Query 414 AKYQAVALVCGASAAVCAGVLKYA 437 + Q+V L GA AV + +YA Sbjct 399 DRNQSVMLAVGAVVAVAVVIGRYA 422 >gi|15827809|ref|NP_302072.1| hypothetical protein ML1539 [Mycobacterium leprae TN] gi|221230286|ref|YP_002503702.1| hypothetical protein MLBr_01539 [Mycobacterium leprae Br4923] gi|13093361|emb|CAC30490.1| probable membrane protein [Mycobacterium leprae] gi|219933393|emb|CAR71634.1| probable membrane protein [Mycobacterium leprae Br4923] Length=503 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 135/496 (28%), Positives = 215/496 (44%), Gaps = 38/496 (7%) Query 25 SQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALPAGS--YELHKINGVRLDINKSLDE 82 S + A PV + ++++ ++ L G +G P G + L I+G L +SL E Sbjct 34 SVLLDANAPVSVMTDPLLKVINSRLCELG-EGTLEPTGRGRWALCLIDGTPLWPTQSLTE 92 Query 83 LGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAM 142 V DGD L + E E +ST ++A + FA + S+ A Sbjct 93 QDVYDGDRLWIRFIADTERRSQVIEHISTAVSA--------NLSKRFAAIDSIVAVQVGA 144 Query 143 AIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGW 202 ++A V L + R + A I +L+++ + +V R D +G Sbjct 145 LMVATGVLASSVLLVWWRWHHGFWLSVIYATVIALLILVMSTLVLMRATTREDRRAGDIM 204 Query 203 L--AVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCG 260 L + + AAA APPG LG+ HA++G V + A+ T + Q ++ TA++T+ Sbjct 205 LLSGIAPVTAAAAAAPPGPLGSPHAVMGFGVFAIAAMLALRFTGR--QLSIYTAMITISV 262 Query 261 ILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFAR 320 ++A + RM S L CV++ ++L P ++ +A +R P F S T R +F Sbjct 263 VVAIASLARMVAMTSAVTLLSCVMLACVLLYHCAPALSRRLAGIRLPVFPSATSRWVFEA 322 Query 321 RAGMPVDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLV 375 R +P V PV E A D L AR L + V + Sbjct 323 RPDLPNTVVRSDGGPPVLEGPASVRDVLLQSERARSYLSGLLLGLGVLLVVSLT------ 376 Query 376 LPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLK 435 + P WL LL+AG T G + +GR + ++QA+ L A V A V++ Sbjct 377 ------ALSNPHVGQRWLPLLLAGFTSGFLLLRGRSYVDRWQAITLAATAVLIVAAVVVR 430 Query 436 YA--LDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIAL 493 YA L +P V G A + A GL A VVP T + P+ R VEW+E L ++ + Sbjct 431 YALVLSSPLAVSIG----AAILVLLPAAGLIAAAVVPNTIYSPLFRKLVEWIEYLCLVPI 486 Query 494 LPAAAALGGLFAWLRH 509 P A L ++ +R+ Sbjct 487 FPLALWLMDVYTAIRY 502 >gi|289574472|ref|ZP_06454699.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339631849|ref|YP_004723491.1| hypothetical protein MAF_18170 [Mycobacterium africanum GM041182] gi|289538903|gb|EFD43481.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339331205|emb|CCC26887.1| conserved hypothetical membrane protein [Mycobacterium africanum GM041182] Length=503 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 127/520 (25%), Positives = 213/520 (41%), Gaps = 96/520 (18%) Query 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 39 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDG 98 Query 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 D L + E E +ST +A+ D R FA + + A +++A Sbjct 99 DRLWIRFIADTERRSQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA-- 148 Query 149 VGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWL----- 203 GVVLA G +G WW W L + + + Sbjct 149 TGVVLA-----------------TGVLG----------WWRWHHNTWLTTIYTAVIGVLV 181 Query 204 --------------------------AVVLLAVAAACAPPGALGAAHALIGLVVVVLGAI 237 A++ + VAAA A PG +G+ A++G V+ + A Sbjct 182 LAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAALPGPVGSPQAVLGFGVLTVAAA 241 Query 238 TIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTV 297 T +R ++ +LAA+A RM S L +L+ +V P + Sbjct 242 LALRFTGRRLGIYTTIVIIDALTMLAALA--RMVAATSAVTLLSSLLLICVVAYHAAPAL 299 Query 298 ALWVARVRPPHFGSITGRDLFARRAGMPVDTV-----APVSEADADDEDNELTDITARGT 352 + +A +R P F S T R +F R +P V APV E + D L AR Sbjct 300 SRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERAR-- 357 Query 353 AIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGF 412 + G+ G+ +++ + + P WL L++AG T G + +GR + Sbjct 358 ----------SFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSY 407 Query 413 AAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVV 469 ++Q++ L A +AAVC ++YAL+ + ++ A + A G+A A V Sbjct 408 VDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIV--AAILVLLPAAGMAAAAHV 462 Query 470 PATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 P T + P+ R VEW+E L ++ + P A L ++A +R+ Sbjct 463 PHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 >gi|240172855|ref|ZP_04751514.1| hypothetical protein MkanA1_26317 [Mycobacterium kansasii ATCC 12478] Length=503 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 83/270 (31%), Positives = 122/270 (46%), Gaps = 31/270 (11%) Query 249 TAVVT--AVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRP 306 TAV+T V T+ G+ VAA S VLA CVL L P ++ +A +R Sbjct 255 TAVITISVVATLAGLARMVAAASAVTLFSSTVLA-CVL-----LYHAAPALSRRLAGIRL 308 Query 307 PHFGSITGRDLFARRAGMPVDTV----APVS-EADADDEDNELTDITARGTAIAASARLV 361 P F S T R +F R +P V P + E A D L AR Sbjct 309 PVFPSATSRWVFEARPDLPTTVVRSGGGPATLEGPASVRDVVLQAERAR----------- 357 Query 362 NAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVAL 421 + G+ VG+ +++ + + P WL LL+AG T G + +GR + ++QA L Sbjct 358 -SFLSGLLVGLGVLMVVCLTALCNPHTGQRWLPLLLAGFTAGFLLLRGRSYVDRWQATTL 416 Query 422 VCGASAAVCAGVLKYA--LDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIR 479 A V A +++YA L +P V A + A GL A VVP T + P+ R Sbjct 417 AGTAVIIVAAVLIRYAVVLASPLSVSIA----AAILVLLPAAGLTAAAVVPNTIYSPLFR 472 Query 480 LTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 VEW+E L ++ + P A L ++A +R+ Sbjct 473 KFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 >gi|31792983|ref|NP_855476.1| hypothetical protein Mb1823 [Mycobacterium bovis AF2122/97] gi|31618574|emb|CAD94526.1| CONSERVED HYPOTHETICAL MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length=503 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 76/287 (27%), Positives = 130/287 (46%), Gaps = 28/287 (9%) Query 234 LGAITIGVATRKRW---QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVL 290 G +T+ A R+ + + TA+V + + A RM S L +L+ +V Sbjct 233 FGVLTVAAALALRFTGRRLGIYTAIVIIDALTMLAALARMVAATSAVTLLSSLLLICVVA 292 Query 291 IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV-----APVSEADADDEDNELT 345 P ++ +A +R P F S T R +F R +P V APV E + D L Sbjct 293 YHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQ 352 Query 346 DITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLF 405 AR + G+ G+ +++ + + P WL L++AG T G Sbjct 353 AERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFL 400 Query 406 ITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALG 462 + +GR + ++Q++ L A +AAVC ++YAL+ + ++ A + A G Sbjct 401 LLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIV--AAILVLLPAAG 455 Query 463 LAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 +A A VP T + P+ R VEW+E L ++ + P A L ++A +R+ Sbjct 456 MAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 >gi|121637696|ref|YP_977919.1| hypothetical protein BCG_1827 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990180|ref|YP_002644867.1| hypothetical membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493343|emb|CAL71814.1| Conserved hypothetical membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773293|dbj|BAH26099.1| hypothetical membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601723|emb|CCC64396.1| conserved hypothetical membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=503 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 75/287 (27%), Positives = 129/287 (45%), Gaps = 28/287 (9%) Query 234 LGAITIGVATRKRW---QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVL 290 G +T+ A R+ + + T +V + + A RM S L +L+ +V Sbjct 233 FGVLTVAAALALRFTGRRLGIYTTIVIIDALTMLAALARMVAATSAVTLLSSLLLICVVA 292 Query 291 IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV-----APVSEADADDEDNELT 345 P ++ +A +R P F S T R +F R +P V APV E + D L Sbjct 293 YHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQ 352 Query 346 DITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLF 405 AR + G+ G+ +++ + + P WL L++AG T G Sbjct 353 AERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFL 400 Query 406 ITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALG 462 + +GR + ++Q++ L A +AAVC ++YAL+ + ++ A + A G Sbjct 401 LLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIV--AAILVLLPAAG 455 Query 463 LAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 +A A VP T + P+ R VEW+E L ++ + P A L ++A +R+ Sbjct 456 MAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 >gi|339298359|gb|AEJ50469.1| hypothetical protein CCDC5180_1632 [Mycobacterium tuberculosis CCDC5180] Length=481 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 75/287 (27%), Positives = 129/287 (45%), Gaps = 28/287 (9%) Query 234 LGAITIGVATRKRW---QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVL 290 G +T+ A R+ + + T +V + + A RM S L +L+ +V Sbjct 211 FGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVA 270 Query 291 IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV-----APVSEADADDEDNELT 345 P ++ +A +R P F S T R +F R +P V APV E + D L Sbjct 271 YHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQ 330 Query 346 DITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLF 405 AR + G+ G+ +++ + + P WL L++AG T G Sbjct 331 AERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFL 378 Query 406 ITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALG 462 + +GR + ++Q++ L A +AAVC ++YAL+ + ++ A + A G Sbjct 379 LLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIV--AAILVLLPAAG 433 Query 463 LAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 +A A VP T + P+ R VEW+E L ++ + P A L ++A +R+ Sbjct 434 MAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 480 >gi|15608932|ref|NP_216311.1| hypothetical protein Rv1795 [Mycobacterium tuberculosis H37Rv] gi|15841264|ref|NP_336301.1| hypothetical protein MT1844 [Mycobacterium tuberculosis CDC1551] gi|148661601|ref|YP_001283124.1| hypothetical protein MRA_1808 [Mycobacterium tuberculosis H37Ra] 65 more sequence titles Length=503 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 75/287 (27%), Positives = 129/287 (45%), Gaps = 28/287 (9%) Query 234 LGAITIGVATRKRW---QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVL 290 G +T+ A R+ + + T +V + + A RM S L +L+ +V Sbjct 233 FGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVA 292 Query 291 IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV-----APVSEADADDEDNELT 345 P ++ +A +R P F S T R +F R +P V APV E + D L Sbjct 293 YHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQ 352 Query 346 DITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLF 405 AR + G+ G+ +++ + + P WL L++AG T G Sbjct 353 AERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFL 400 Query 406 ITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALG 462 + +GR + ++Q++ L A +AAVC ++YAL+ + ++ A + A G Sbjct 401 LLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIV--AAILVLLPAAG 455 Query 463 LAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 +A A VP T + P+ R VEW+E L ++ + P A L ++A +R+ Sbjct 456 MAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 >gi|167967227|ref|ZP_02549504.1| hypothetical protein MtubH3_03977 [Mycobacterium tuberculosis H37Ra] Length=434 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/287 (27%), Positives = 129/287 (45%), Gaps = 28/287 (9%) Query 234 LGAITIGVATRKRW---QTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVL 290 G +T+ A R+ + + T +V + + A RM S L +L+ +V Sbjct 164 FGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVA 223 Query 291 IRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV-----APVSEADADDEDNELT 345 P ++ +A +R P F S T R +F R +P V APV E + D L Sbjct 224 YHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQ 283 Query 346 DITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLF 405 AR + G+ G+ +++ + + P WL L++AG T G Sbjct 284 AERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFL 331 Query 406 ITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALG 462 + +GR + ++Q++ L A +AAVC ++YAL+ + ++ A + A G Sbjct 332 LLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIV--AAILVLLPAAG 386 Query 463 LAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 +A A VP T + P+ R VEW+E L ++ + P A L ++A +R+ Sbjct 387 MAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 433 >gi|240169215|ref|ZP_04747874.1| hypothetical protein MkanA1_07874 [Mycobacterium kansasii ATCC 12478] gi|296165328|ref|ZP_06847870.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899344|gb|EFG78808.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=504 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 146/529 (28%), Positives = 217/529 (42%), Gaps = 56/529 (10%) Query 1 VTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGV-AL 59 VTA A P R V + V A V +V+L + L G + A Sbjct 11 VTAAAAPALPDRVLVAVIAGATKIGVVLDATASVSVQLAALVDLVNTRLGELGEPALTAG 70 Query 60 PAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKW 119 P G + L ++G L SL GV DG L L E+ E +++ +AA Sbjct 71 PRGRWTLCWVDGSPLKPGLSLAAQGVSDGTRLWLRFAADTEARINVVEHVTSAVAAEL-- 128 Query 120 LGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLL 179 R + VT + AA ++ V AL R R PA GG+ LL Sbjct 129 ------SRRWPAVTPVWAARVGAGMVVAGVLAATALLGRWRYGHLGWAPAIYCGGLAALL 182 Query 180 VIGALVVWWGWRERRDLFSGFG----WLAVVLLAVAAACAPPGALGAAHALIGLVVVVLG 235 + A ++ R+ L G G + LAV AA A PG +GA HA +GL ++ Sbjct 183 LAAAAII--LARQASRLARGVGDTLLLTGCLPLAVGAAAAVPGPMGAPHAALGLASALVA 240 Query 236 AITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTP 295 A+ + T + A+ T V+ + V +VRM S +L VL+ L+ + ++P Sbjct 241 AVLVVRFTGR--HIALGTTVIVTAAVGVVVGSVRMVLVTSAPILLAVVLLVSLIGMHVSP 298 Query 296 TVALWVARVRPPHFGSITGRDLFARRAGMPVDTV---APVSEADADDEDNELTDITARGT 352 TVA WVA +R P F S +G+ +F R +P D V+ + E+T T R Sbjct 299 TVARWVAGIRLPVFPSASGQWIFEARPDLPADHAVASGQVATFAGPESVREVTVATDRAH 358 Query 353 A-----IAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFIT 407 + + A+ LV VG+C P P WL L++AGL + Sbjct 359 SYLTGLLVATTGLVVVCSVGLC---------------DPHAPRRWLPLVLAGLVAVAVLL 403 Query 408 QGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLW--PAIFVAAFAALGL-- 463 +GR F ++QA A A V +Y L LW PA+ A + + Sbjct 404 RGRSFTDRWQATIFALAAVALVIGVAGRYVLG---------LWTMPALLAGVSAMVAVPV 454 Query 464 ---AVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH 509 +VVP + P R VEW+E + + + P A L G+ A +R+ Sbjct 455 AGLVAGVVVPNRFYTPTFRKIVEWVEYVCLTGIFPLAFWLMGVLAAIRY 503 >gi|296138071|ref|YP_003645314.1| secretion protein snm4 [Tsukamurella paurometabola DSM 20162] gi|296026205|gb|ADG76975.1| secretion protein snm4 [Tsukamurella paurometabola DSM 20162] Length=528 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 91/370 (25%), Positives = 153/370 (42%), Gaps = 35/370 (9%) Query 61 AGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWL 120 AG++ + G L +KSL + GV DGD L+L + ++F P ES + + + Sbjct 76 AGAWTFAREGGTPLSRDKSLADAGVLDGDRLILAETFSNQTFRPLIESTADAIQEFCR-- 133 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPV----PAAMAGGIG 176 + F TS TA + + + V AL L + DS V P A G I Sbjct 134 ------QRFRRFTSGTARTLGLIALVLGAAVFAALVLLA-WMADSSVLWWFPVAAIGSIA 186 Query 177 VLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPP-----GALGAAHALIGLVV 231 V + A+ + ++ ++ A VL + PP GA AA+ L G V Sbjct 187 V--ITAAVSADRQYHSQQVAYALQLAAAPVLFSTGFVLIPPDGGADGAFTAANVLTGAVF 244 Query 232 VVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLI 291 ++G + +G ++ AV+ + V +A+ + P+ + ++G L+L Sbjct 245 TLIGVVILGRSS--GLGAAVLAGLGLVSAATVVASALFAYTPLGRPAIPAIGVIGGLLLA 302 Query 292 RMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARG 351 AL +ARVRP G D+ R+ + V D D+E T ARG Sbjct 303 NWVQGWALMLARVRPDTLPP-PGEDI--DRSELDV-------AYHVDTFDDESTTELARG 352 Query 352 ---TAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQ 408 TA+ +R + G V V+ +L + +L P + W +++A L + + + Sbjct 353 DENTALERKSRTAAKLLTGFYVAVAAILVVSALTILVPDTHYFWGEVVIAALVSVICVLR 412 Query 409 GRGFAAKYQA 418 GR + A Sbjct 413 GRTLDDRVHA 422 >gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_03532 [Mycobacterium kansasii ATCC 12478] Length=511 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 75/272 (28%), Positives = 110/272 (41%), Gaps = 31/272 (11%) Query 10 PARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRK-------GFDGVALPAG 62 PA V I K + V PA P+E + + V + ADL GFD A Sbjct 20 PATTRVTILTGKRMTDLVLPAAAPMETYIDDTVAVL-ADLLEDTPPDVLAGFDFSAQGVW 78 Query 63 SYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGK--WL 120 ++ +RLD +SLDE GV DG L LV E + P E + +A + + Sbjct 79 AFARPGFPPLRLD--QSLDEAGVVDGSLLTLVTVSRTERYRPLVEDVIDAIAVLDESPEF 136 Query 121 GRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTIT-DSPVPAAMAGGIGVLL 179 R DR H A+ ++ + + VV +R T SP G IGV++ Sbjct 137 DRSALDRF---------VHVAIPVMTLPITVV---AVRAWWATGRSPFWPLAIGIIGVVV 184 Query 180 VIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPP-----GALGAAHALIGLVVVVL 234 ++G V + ++ DL A L AAA A P +LGA V+ Sbjct 185 LVGCFVA-KRFYQKLDLAESLLLTAYQPLTAAAAIAVPLPRGVNSLGAPQIAAAATAVLF 243 Query 235 GAITIGVATRKRWQTAVVTAVVTVCGILAAVA 266 + R+R + A A+ ++ I AAVA Sbjct 244 LTLMTRGGPRRRHELASFVAITSIATIAAAVA 275 >gi|339294731|gb|AEJ46842.1| hypothetical membrane protein [Mycobacterium tuberculosis CCDC5079] Length=158 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/143 (28%), Positives = 73/143 (52%), Gaps = 2/143 (1%) Query 367 GMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGAS 426 G+ G+ +++ + + P WL L++AG T G + +GR + ++Q++ L A Sbjct 17 GLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAV 76 Query 427 AAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 486 A ++YAL+ + ++ A + A G+A A VP T + P+ R VEW+E Sbjct 77 IIAAAVCVRYALELSSPLAVSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 134 Query 487 VLAMIALLPAAAALGGLFAWLRH 509 L ++ + P A L ++A +R+ Sbjct 135 YLCLMPIFPLALWLMNVYAAIRY 157 >gi|169630836|ref|YP_001704485.1| hypothetical protein MAB_3757 [Mycobacterium abscessus ATCC 19977] gi|169242803|emb|CAM63831.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=511 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 120/517 (24%), Positives = 214/517 (42%), Gaps = 49/517 (9%) Query 13 CAVNICYDKHLCSQVFPAGIPVEGFFEGMVELFDADLKRKGFDGVALPAGSYELH----K 68 C V+I ++ P +P+ +V++ + + G + P + E H + Sbjct 18 CRVSIQAERTQVDLALPTSVPLALLVGSIVDIIN---QHVGVPELTSPEDAVETHWRLSR 74 Query 69 INGVRLDINKSLDELGVQDGDTLVLV-PRVAGES--FEPQYESLSTGLAAMGKWLGRDGG 125 L ++ +L EL V+DGD L+L VA F+ + ++ST R+ Sbjct 75 PGQPPLQMSSTLGELEVRDGDLLILTRSDVAAPDPLFDDVFLAVSTFRTVSAHPWSRNAA 134 Query 126 DRMFAPVTSLTAAHTAMAII---AMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIG 182 + A V L+A A A++ A G++L + +A I ++ + Sbjct 135 RILGASVCGLSALLGATALLRAGATNPGLLLPI---------------IAVAIALVAMTA 179 Query 183 ALVVWWGWRERRDLFSG--FGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIG 240 A+ + R D + AV AVA A PG GA HA++ L+V ++ +I Sbjct 180 AV---FANRVYDDSLASVMLSHCAVGFSAVAGALFVPGKYGAPHAMLALMVAMVVSILAM 236 Query 241 VATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALW 300 AT + V A + G AA+ V +F P + A+ VG+ + ++P VA+ Sbjct 237 RATGTGTTSLVAVASASFLGFAAALGYV-LFEPPIYSLGAVLGSVGICA-VALSPRVAMV 294 Query 301 VARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARL 360 +AR+ P + G + P++ + + D + +D E + A Sbjct 295 LARLPLPPVPT-QGAPSRPEHSTAPIEAIEGLDGLDTEGDDVEDATALPPLPDLREKALR 353 Query 361 VNAVQVGMCVGVSLVLP-AAVWGVLT--------PRQPWAWLALLVAGLTVGLFITQGRG 411 +AV G+ G S V A+ LT P +++AGL + + R Sbjct 354 AHAVLTGLVCGTSAVTAVGAMLAALTFSGAGGHHPTGAHRLSGVVLAGLIALAMMLRARS 413 Query 412 FAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPA 471 A Q VA+ G A A A+ P T ++ + A A +A+ +V A Sbjct 414 HADLAQTVAINLGGIAIPAAAFAFVAVAYP----TAAVFTTVLAAIAAGSAIALGFLVSA 469 Query 472 TRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLR 508 ++ P+ R TVE +E +A+ ++P A + G+++ +R Sbjct 470 RKYSPVARRTVEIIEYIALSLIVPIAVWVCGVYSAVR 506 Lambda K H 0.326 0.139 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1104784772540 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40