BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3888c

Length=341
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15611024|ref|NP_218405.1|  hypothetical protein Rv3888c [Mycob...   695    0.0   
gi|254548892|ref|ZP_05139339.1|  hypothetical protein Mtube_00245...   694    0.0   
gi|344221728|gb|AEN02359.1|  hypothetical protein MTCTRI2_3967 [M...   693    0.0   
gi|306778782|ref|ZP_07417119.1|  conserved membrane protein [Myco...   692    0.0   
gi|289764080|ref|ZP_06523458.1|  conserved membrane protein [Myco...   692    0.0   
gi|323717304|gb|EGB26509.1|  membrane protein [Mycobacterium tube...   674    0.0   
gi|298527361|ref|ZP_07014770.1|  conserved membrane protein [Myco...   658    0.0   
gi|240168368|ref|ZP_04747027.1|  hypothetical protein MkanA1_0358...   634    1e-179
gi|41406261|ref|NP_959097.1|  hypothetical protein MAP0163 [Mycob...   604    5e-171
gi|342860123|ref|ZP_08716775.1|  hypothetical protein MCOL_14630 ...   601    5e-170
gi|336457496|gb|EGO36503.1|  ATPase involved in chromosome partit...   586    2e-165
gi|296167004|ref|ZP_06849417.1|  conserved hypothetical protein [...   574    6e-162
gi|118465993|ref|YP_879450.1|  hypothetical protein MAV_0156 [Myc...   557    8e-157
gi|333988691|ref|YP_004521305.1|  hypothetical protein JDM601_005...   516    1e-144
gi|254821256|ref|ZP_05226257.1|  hypothetical protein MintA_15062...   442    5e-122
gi|121639798|ref|YP_980022.1|  hypothetical protein BCG_3943c [My...   439    4e-121
gi|108797042|ref|YP_637239.1|  hypothetical protein Mmcs_0061 [My...   199    5e-49 
gi|119855164|ref|YP_935769.1|  ATPase involved in chromosome part...   195    1e-47 
gi|120401097|ref|YP_950926.1|  hypothetical protein Mvan_0069 [My...   188    1e-45 
gi|118471679|ref|YP_884472.1|  hypothetical protein MSMEG_0053 [M...   186    4e-45 
gi|296165448|ref|ZP_06847984.1|  ATPase involved in chromosome pa...   186    6e-45 
gi|294995170|ref|ZP_06800861.1|  hypothetical protein Mtub2_11807...   176    7e-42 
gi|145221371|ref|YP_001132049.1|  hypothetical protein Mflv_0776 ...   175    9e-42 
gi|315441745|ref|YP_004074624.1|  ATPase involved in chromosome p...   175    1e-41 
gi|31795034|ref|NP_857527.1|  hypothetical protein Mb3890 [Mycoba...   174    2e-41 
gi|289572119|ref|ZP_06452346.1|  conserved hypothetical protein [...   174    2e-41 
gi|340628832|ref|YP_004747284.1|  hypothetical protein MCAN_38821...   174    3e-41 
gi|15610996|ref|NP_218377.1|  hypothetical protein Rv3860 [Mycoba...   174    3e-41 
gi|296168241|ref|ZP_06850214.1|  conserved hypothetical protein [...   172    6e-41 
gi|41410124|ref|NP_962960.1|  hypothetical protein MAP4026 [Mycob...   172    6e-41 
gi|254777052|ref|ZP_05218568.1|  hypothetical protein MaviaA2_206...   172    7e-41 
gi|118463940|ref|YP_883744.1|  hypothetical protein MAV_4615 [Myc...   171    2e-40 
gi|254818926|ref|ZP_05223927.1|  hypothetical protein MintA_03321...   169    4e-40 
gi|262203526|ref|YP_003274734.1|  chromosome partitioning ATPase ...   168    1e-39 
gi|54022798|ref|YP_117040.1|  hypothetical protein nfa8310 [Nocar...   166    4e-39 
gi|333989168|ref|YP_004521782.1|  hypothetical protein JDM601_052...   166    7e-39 
gi|323717444|gb|EGB26648.1|  ATPase [Mycobacterium tuberculosis C...   164    1e-38 
gi|240171278|ref|ZP_04749937.1|  hypothetical protein MkanA1_1833...   164    2e-38 
gi|183980897|ref|YP_001849188.1|  hypothetical protein MMAR_0876 ...   163    3e-38 
gi|343927687|ref|ZP_08767155.1|  hypothetical protein GOALK_097_0...   162    5e-38 
gi|118469741|ref|YP_885377.1|  hypothetical protein MSMEG_0975 [M...   162    9e-38 
gi|15839924|ref|NP_334961.1|  hypothetical protein MT0552 [Mycoba...   161    1e-37 
gi|308369424|ref|ZP_07666733.1|  hypothetical protein TMBG_03767 ...   161    1e-37 
gi|339293577|gb|AEJ45688.1|  hypothetical protein CCDC5079_0498 [...   161    1e-37 
gi|15607670|ref|NP_215044.1|  hypothetical protein Rv0530 [Mycoba...   161    2e-37 
gi|294996039|ref|ZP_06801730.1|  hypothetical protein Mtub2_16463...   161    2e-37 
gi|289441916|ref|ZP_06431660.1|  conserved hypothetical protein [...   160    2e-37 
gi|289749027|ref|ZP_06508405.1|  conserved hypothetical protein [...   160    3e-37 
gi|342858961|ref|ZP_08715615.1|  hypothetical protein MCOL_08793 ...   160    3e-37 
gi|167966711|ref|ZP_02548988.1|  hypothetical protein MtubH3_0103...   159    9e-37 


>gi|15611024|ref|NP_218405.1| hypothetical protein Rv3888c [Mycobacterium tuberculosis H37Rv]
 gi|15843519|ref|NP_338556.1| hypothetical protein MT4003 [Mycobacterium tuberculosis CDC1551]
 gi|148663755|ref|YP_001285278.1| hypothetical protein MRA_3927 [Mycobacterium tuberculosis H37Ra]
 48 more sequence titles
 
gi|148825096|ref|YP_001289850.1| hypothetical protein TBFG_13923 [Mycobacterium tuberculosis F11]
 gi|167969426|ref|ZP_02551703.1| hypothetical protein MtubH3_15922 [Mycobacterium tuberculosis 
H37Ra]
 gi|253800938|ref|YP_003033940.1| hypothetical protein TBMG_03936 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233374|ref|ZP_04926700.1| hypothetical protein TBCG_03815 [Mycobacterium tuberculosis C]
 gi|254366429|ref|ZP_04982473.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
 gi|289441330|ref|ZP_06431074.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289445489|ref|ZP_06435233.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289556157|ref|ZP_06445367.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289572147|ref|ZP_06452374.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289572541|ref|ZP_06452768.1| conserved membrane protein [Mycobacterium tuberculosis K85]
 gi|289747733|ref|ZP_06507111.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289748424|ref|ZP_06507802.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289756023|ref|ZP_06515401.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760060|ref|ZP_06519438.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995573|ref|ZP_06801264.1| hypothetical protein Mtub2_13967 [Mycobacterium tuberculosis 
210]
 gi|297636574|ref|ZP_06954354.1| hypothetical protein MtubK4_20715 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733569|ref|ZP_06962687.1| hypothetical protein MtubKR_20860 [Mycobacterium tuberculosis 
KZN R506]
 gi|306778254|ref|ZP_07416591.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306974371|ref|ZP_07487032.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307082079|ref|ZP_07491249.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307086688|ref|ZP_07495801.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|313660900|ref|ZP_07817780.1| hypothetical protein MtubKV_20855 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633878|ref|YP_004725520.1| hypothetical protein MAF_39030 [Mycobacterium africanum GM041182]
 gi|340628860|ref|YP_004747312.1| hypothetical protein MCAN_39101 [Mycobacterium canettii CIPT 
140010059]
 gi|1944600|emb|CAB08086.1| PROBABLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis 
H37Rv]
 gi|13883895|gb|AAK48370.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124603167|gb|EAY61442.1| hypothetical protein TBCG_03815 [Mycobacterium tuberculosis C]
 gi|134151941|gb|EBA43986.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148507907|gb|ABQ75716.1| putative conserved membrane protein [Mycobacterium tuberculosis 
H37Ra]
 gi|148723623|gb|ABR08248.1| conserved membrane protein [Mycobacterium tuberculosis F11]
 gi|253322442|gb|ACT27045.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
 gi|289414249|gb|EFD11489.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289418447|gb|EFD15648.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440789|gb|EFD23282.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289536972|gb|EFD41550.1| conserved membrane protein [Mycobacterium tuberculosis K85]
 gi|289545902|gb|EFD49549.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289688261|gb|EFD55749.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289689011|gb|EFD56440.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289696610|gb|EFD64039.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289715624|gb|EFD79636.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308213407|gb|EFO72806.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308356269|gb|EFP45120.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308360261|gb|EFP49112.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308363903|gb|EFP52754.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|326905723|gb|EGE52656.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
 gi|328460666|gb|AEB06089.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
 gi|339333234|emb|CCC28971.1| putative conserved membrane protein [Mycobacterium africanum 
GM041182]
 gi|340007050|emb|CCC46241.1| putative conserved membrane protein [Mycobacterium canettii CIPT 
140010059]
Length=341

 Score =  695 bits (1793),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 340/341 (99%), Positives = 341/341 (100%), Gaps = 0/341 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +TNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS
Sbjct  1    MTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE
Sbjct  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT
Sbjct  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH
Sbjct  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341


>gi|254548892|ref|ZP_05139339.1| hypothetical protein Mtube_00245 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=341

 Score =  694 bits (1791),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 339/341 (99%), Positives = 341/341 (100%), Gaps = 0/341 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +TNPWNDPNMLDDGA+GRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS
Sbjct  1    MTNPWNDPNMLDDGAVGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE
Sbjct  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT
Sbjct  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH
Sbjct  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341


>gi|344221728|gb|AEN02359.1| hypothetical protein MTCTRI2_3967 [Mycobacterium tuberculosis 
CTRI-2]
Length=341

 Score =  693 bits (1789),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 339/341 (99%), Positives = 341/341 (100%), Gaps = 0/341 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +TNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS
Sbjct  1    MTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE
Sbjct  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT
Sbjct  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH
Sbjct  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            LAKGGIIDT+HELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  301  LAKGGIIDTLHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341


>gi|306778782|ref|ZP_07417119.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306786810|ref|ZP_07425132.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|306786939|ref|ZP_07425261.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 
gi|306791493|ref|ZP_07429795.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|306795558|ref|ZP_07433860.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|306801533|ref|ZP_07438201.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|306805741|ref|ZP_07442409.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|306970138|ref|ZP_07482799.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308328122|gb|EFP16973.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308328584|gb|EFP17435.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308336342|gb|EFP25193.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308339953|gb|EFP28804.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308343855|gb|EFP32706.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308347640|gb|EFP36491.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308351667|gb|EFP40518.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308352265|gb|EFP41116.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
Length=341

 Score =  692 bits (1787),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 339/341 (99%), Positives = 341/341 (100%), Gaps = 0/341 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +TNPWNDPNMLDDGAIGRGDPSVR+HFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS
Sbjct  1    MTNPWNDPNMLDDGAIGRGDPSVRNHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE
Sbjct  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT
Sbjct  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH
Sbjct  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341


>gi|289764080|ref|ZP_06523458.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
 gi|289711586|gb|EFD75602.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
Length=341

 Score =  692 bits (1786),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 338/341 (99%), Positives = 340/341 (99%), Gaps = 0/341 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +TNPWNDPNMLDDGA+GRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPG GWRKFVYSVS
Sbjct  1    MTNPWNDPNMLDDGAVGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGIGWRKFVYSVS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE
Sbjct  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT
Sbjct  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH
Sbjct  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341


>gi|323717304|gb|EGB26509.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|339296696|gb|AEJ48807.1| hypothetical protein CCDC5079_3618 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339300289|gb|AEJ52399.1| hypothetical protein CCDC5180_3562 [Mycobacterium tuberculosis 
CCDC5180]
Length=332

 Score =  674 bits (1739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 332/332 (100%), Positives = 332/332 (100%), Gaps = 0/332 (0%)

Query  10   MLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGES  69
            MLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGES
Sbjct  1    MLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGES  60

Query  70   PRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVP  129
            PRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVP
Sbjct  61   PRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVP  120

Query  130  SFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVP  189
            SFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVP
Sbjct  121  SFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVP  180

Query  190  AMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDY  249
            AMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDY
Sbjct  181  AMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDY  240

Query  250  LRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDT  309
            LRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDT
Sbjct  241  LRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDT  300

Query  310  VHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            VHELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  301  VHELNKKSRLRLFEITAGLADKYVPDAERAAQ  332


>gi|298527361|ref|ZP_07014770.1| conserved membrane protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497155|gb|EFI32449.1| conserved membrane protein [Mycobacterium tuberculosis 94_M4241A]
Length=337

 Score =  658 bits (1698),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 336/341 (99%), Positives = 337/341 (99%), Gaps = 4/341 (1%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +TNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS
Sbjct  1    MTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYRNLQGRIRR    QYVITVVSGKGGVGVTTMAACIGGVFRECRPE
Sbjct  61   FHKINPGESPRERHYRNLQGRIRR----QYVITVVSGKGGVGVTTMAACIGGVFRECRPE  116

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT
Sbjct  117  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  176

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS
Sbjct  177  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  236

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH
Sbjct  237  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  296

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  297  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  337


>gi|240168368|ref|ZP_04747027.1| hypothetical protein MkanA1_03587 [Mycobacterium kansasii ATCC 
12478]
Length=341

 Score =  634 bits (1634),  Expect = 1e-179, Method: Compositional matrix adjust.
 Identities = 316/340 (93%), Positives = 331/340 (98%), Gaps = 0/340 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +T+PWNDPNM D+GA+GRGDPSVR HFRDSVSDTMRITDLAAPRKIPPG+GWRKF+Y+ S
Sbjct  1    MTSPWNDPNMSDEGALGRGDPSVRRHFRDSVSDTMRITDLAAPRKIPPGSGWRKFIYAAS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYR+LQ RIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE
Sbjct  61   FHKINPGESPRERHYRDLQARIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVP FGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT
Sbjct  121  NVIAIDAVPGFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFS VLSRLRRTHTVI++DT+PDLEHDVMK VLQ+TDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSGVLSRLRRTHTVIIVDTAPDLEHDVMKPVLQNTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLR+QGYHELVSRSTVI+NHTD+ITDKDALAYLTERFTKVGA VEAMPFDPH
Sbjct  241  RPVLRAVDYLRSQGYHELVSRSTVIINHTDNITDKDALAYLTERFTKVGATVEAMPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAA  340
            LAKGGIIDTVHEL KKSRLRLFEITAGLADKYVPDAERAA
Sbjct  301  LAKGGIIDTVHELKKKSRLRLFEITAGLADKYVPDAERAA  340


>gi|41406261|ref|NP_959097.1| hypothetical protein MAP0163 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|254773212|ref|ZP_05214728.1| hypothetical protein MaviaA2_00821 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|41394609|gb|AAS02480.1| hypothetical protein MAP_0163 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=341

 Score =  604 bits (1558),  Expect = 5e-171, Method: Compositional matrix adjust.
 Identities = 300/339 (89%), Positives = 323/339 (96%), Gaps = 0/339 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +T+PWNDPNM D+GA+ RGDPS   +F DSVSDTMRITDLAAPRKIPPG+GWRKF+Y++S
Sbjct  1    MTSPWNDPNMSDEGALRRGDPSGGSNFPDSVSDTMRITDLAAPRKIPPGSGWRKFIYTIS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKINPGESPRERHYR+LQ RIRRHIRRQYVITVVSGKGGVGVTT+ ACIGGVFRECRP+
Sbjct  61   FHKINPGESPRERHYRDLQNRIRRHIRRQYVITVVSGKGGVGVTTLVACIGGVFRECRPQ  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVP FGTLADRIDESPPGDY AIINDTDVQGYADIREHLGQN VGLDVLAGNRT
Sbjct  121  NVIAIDAVPGFGTLADRIDESPPGDYTAIINDTDVQGYADIREHLGQNAVGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFS VLSRLRRTHTV+++DTSPDLEH+VMK VL++TDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSGVLSRLRRTHTVMIVDTSPDLEHEVMKPVLENTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLR+QGYHELVSRSTVI+NHTD ITDKDALAYLTERFTKVGA VEA+PFDPH
Sbjct  241  RPVLRAVDYLRSQGYHELVSRSTVIVNHTDQITDKDALAYLTERFTKVGATVEALPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERA  339
            LAKGGIIDTVHEL KK+RLRLFEITAGLADKY+PDAERA
Sbjct  301  LAKGGIIDTVHELKKKTRLRLFEITAGLADKYIPDAERA  339


>gi|342860123|ref|ZP_08716775.1| hypothetical protein MCOL_14630 [Mycobacterium colombiense CECT 
3035]
 gi|342132501|gb|EGT85730.1| hypothetical protein MCOL_14630 [Mycobacterium colombiense CECT 
3035]
Length=341

 Score =  601 bits (1550),  Expect = 5e-170, Method: Compositional matrix adjust.
 Identities = 298/339 (88%), Positives = 322/339 (95%), Gaps = 0/339 (0%)

Query  1    VTNPWNDPNMLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVS  60
            +T+PWNDPNM D+GA+ RGDPS   +F DSVSDTMRITDLAAPRKIPPG+GWRKF+YS+S
Sbjct  1    MTSPWNDPNMSDEGALRRGDPSGGSNFPDSVSDTMRITDLAAPRKIPPGSGWRKFIYSIS  60

Query  61   FHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPE  120
            FHKIN GESPRERHYR+LQ RIRRHIRRQYVITVVSGKGGVGVTT+ AC+GGVFRECRP+
Sbjct  61   FHKINLGESPRERHYRDLQNRIRRHIRRQYVITVVSGKGGVGVTTLVACLGGVFRECRPQ  120

Query  121  NVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRT  180
            NVIAIDAVP FGTLADRIDESPPGDY AIINDTDVQGYADIREHLGQN +GLDVLAGNRT
Sbjct  121  NVIAIDAVPGFGTLADRIDESPPGDYTAIINDTDVQGYADIREHLGQNAIGLDVLAGNRT  180

Query  181  SDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRS  240
            SDQPRPLVPAMFS VLSRLRRTHTV+++DTSPDLEH+VMK VL++TDTLVFVSGITADRS
Sbjct  181  SDQPRPLVPAMFSGVLSRLRRTHTVMIVDTSPDLEHEVMKPVLENTDTLVFVSGITADRS  240

Query  241  RPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPH  300
            RPVLRAVDYLR+QGYHELVSRSTVI+NHTD ITDKDALAYLTERFTKVGA VE +PFDPH
Sbjct  241  RPVLRAVDYLRSQGYHELVSRSTVIVNHTDQITDKDALAYLTERFTKVGATVEVLPFDPH  300

Query  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERA  339
            LAKGGIIDTVHELNKKSRLRLFEITAGLADKY+PDAER+
Sbjct  301  LAKGGIIDTVHELNKKSRLRLFEITAGLADKYIPDAERS  339


>gi|336457496|gb|EGO36503.1| ATPase involved in chromosome partitioning [Mycobacterium avium 
subsp. paratuberculosis S397]
Length=332

 Score =  586 bits (1510),  Expect = 2e-165, Method: Compositional matrix adjust.
 Identities = 293/330 (89%), Positives = 314/330 (96%), Gaps = 0/330 (0%)

Query  10   MLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGES  69
            M D+GA+ RGDPS   +F DSVSDTMRITDLAAPRKIPPG+GWRKF+Y++SFHKINPGES
Sbjct  1    MSDEGALRRGDPSEGSNFPDSVSDTMRITDLAAPRKIPPGSGWRKFIYTISFHKINPGES  60

Query  70   PRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVP  129
            PRERHYR+LQ RIRRHIRRQYVITVVSGKGGVGVTT+ ACIGGVFRECRP+NVIAIDAVP
Sbjct  61   PRERHYRDLQNRIRRHIRRQYVITVVSGKGGVGVTTLVACIGGVFRECRPQNVIAIDAVP  120

Query  130  SFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVP  189
             FGTLADRIDESPPGDY AIINDTDVQGYADIREHLGQN VGLDVLAGNRTSDQPRPLVP
Sbjct  121  GFGTLADRIDESPPGDYTAIINDTDVQGYADIREHLGQNAVGLDVLAGNRTSDQPRPLVP  180

Query  190  AMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDY  249
            AMFS VLSRLRRTHTV+++DTSPDLEH+VMK VL++TDTLVFVSGITADRSRPVLRAVDY
Sbjct  181  AMFSGVLSRLRRTHTVMIVDTSPDLEHEVMKPVLENTDTLVFVSGITADRSRPVLRAVDY  240

Query  250  LRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDT  309
            LR+QGYHELVSRSTVI+NHTD ITDKDALAYLTERFTKVGA VEA+PFDPHLAKGGIIDT
Sbjct  241  LRSQGYHELVSRSTVIVNHTDQITDKDALAYLTERFTKVGATVEALPFDPHLAKGGIIDT  300

Query  310  VHELNKKSRLRLFEITAGLADKYVPDAERA  339
            VHEL KK+RLRLFEITAGLADKY+PDAERA
Sbjct  301  VHELKKKTRLRLFEITAGLADKYIPDAERA  330


>gi|296167004|ref|ZP_06849417.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897634|gb|EFG77227.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=332

 Score =  574 bits (1480),  Expect = 6e-162, Method: Compositional matrix adjust.
 Identities = 288/331 (88%), Positives = 310/331 (94%), Gaps = 0/331 (0%)

Query  10   MLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGES  69
            M D+GA+ RGDPS   +F DSVSDTMRITDLAAPRKIPPG+GWRKF+Y +SF KINPGES
Sbjct  1    MSDEGALRRGDPSGGRNFPDSVSDTMRITDLAAPRKIPPGSGWRKFIYVISFKKINPGES  60

Query  70   PRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVP  129
            P ERHYR+LQ RIRRHIRRQYVITVVSGKGGVGV+TM ACIGGVFRECRP+NVIAIDAVP
Sbjct  61   PAERHYRDLQNRIRRHIRRQYVITVVSGKGGVGVSTMVACIGGVFRECRPQNVIAIDAVP  120

Query  130  SFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVP  189
             FGTLADRIDESPPGDY AIINDTDVQGYADIREHLGQN +GLDVLAGNRTSDQPRPLVP
Sbjct  121  GFGTLADRIDESPPGDYTAIINDTDVQGYADIREHLGQNPIGLDVLAGNRTSDQPRPLVP  180

Query  190  AMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDY  249
            AMFS VLSRLRRTHTV+++DTSPDLEH+VMK VL++TDTLVFVSGITADRSRPVLRAVDY
Sbjct  181  AMFSGVLSRLRRTHTVMIVDTSPDLEHEVMKPVLENTDTLVFVSGITADRSRPVLRAVDY  240

Query  250  LRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDT  309
            LR+QGYHELVSRSTVI+NHTD ITDKDALAYLTERF+KVGA VE MPFDPHLAKGG+IDT
Sbjct  241  LRSQGYHELVSRSTVIINHTDQITDKDALAYLTERFSKVGATVEEMPFDPHLAKGGLIDT  300

Query  310  VHELNKKSRLRLFEITAGLADKYVPDAERAA  340
            VHEL KK+RLRLFEITAGLADKY+PDAER A
Sbjct  301  VHELKKKTRLRLFEITAGLADKYIPDAERTA  331


>gi|118465993|ref|YP_879450.1| hypothetical protein MAV_0156 [Mycobacterium avium 104]
 gi|118167280|gb|ABK68177.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=307

 Score =  557 bits (1436),  Expect = 8e-157, Method: Compositional matrix adjust.
 Identities = 277/305 (91%), Positives = 295/305 (97%), Gaps = 0/305 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            MRITDLAAPRKIPPG+GWRKF+Y++SFHKINPGESPRERHYR+LQ RIRRHIRRQYVITV
Sbjct  1    MRITDLAAPRKIPPGSGWRKFIYTISFHKINPGESPRERHYRDLQNRIRRHIRRQYVITV  60

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            VSGKGGVGVTT+ ACIGGVFRECRP+NVIAIDAVP FGTLADRIDESPPGDY AIINDTD
Sbjct  61   VSGKGGVGVTTLVACIGGVFRECRPQNVIAIDAVPGFGTLADRIDESPPGDYTAIINDTD  120

Query  155  VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDL  214
            VQGYADIREHLGQN VGLDVLAGNRTSDQPRPLVPAMFS VLSRLRRTHTV+++DTSPDL
Sbjct  121  VQGYADIREHLGQNAVGLDVLAGNRTSDQPRPLVPAMFSGVLSRLRRTHTVMIVDTSPDL  180

Query  215  EHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITD  274
            EH+VMK VL++TDTLVFVSGITADRSRPVLRAVDYLR+QGYHELVSRSTVI+NHTD ITD
Sbjct  181  EHEVMKPVLENTDTLVFVSGITADRSRPVLRAVDYLRSQGYHELVSRSTVIVNHTDQITD  240

Query  275  KDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYVP  334
            KDALAYLTERFTKVGA VEA+PFDPHLAKGGIIDTVHEL KK+RLRLFEITAGLADKY+P
Sbjct  241  KDALAYLTERFTKVGATVEALPFDPHLAKGGIIDTVHELKKKTRLRLFEITAGLADKYIP  300

Query  335  DAERA  339
            DAERA
Sbjct  301  DAERA  305


>gi|333988691|ref|YP_004521305.1| hypothetical protein JDM601_0051 [Mycobacterium sp. JDM601]
 gi|333484659|gb|AEF34051.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=329

 Score =  516 bits (1330),  Expect = 1e-144, Method: Compositional matrix adjust.
 Identities = 260/329 (80%), Positives = 290/329 (89%), Gaps = 0/329 (0%)

Query  10   MLDDGAIGRGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGES  69
            M D+GA GR DP+  H +RDSVSD+MRI+DLA PRKIPPG+GWRK VY VS   INPGES
Sbjct  1    MPDEGAPGRRDPASGHRYRDSVSDSMRISDLATPRKIPPGSGWRKLVYLVSAKVINPGES  60

Query  70   PRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVP  129
            PRERHYR+L+ RIRRHIRRQYVIT+VSGKGG GVTTMAA IG VFRECRPENVIAIDAVP
Sbjct  61   PRERHYRDLRNRIRRHIRRQYVITLVSGKGGTGVTTMAASIGSVFRECRPENVIAIDAVP  120

Query  130  SFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVP  189
             FGTL+DRIDE PPGDY+A+++DTDVQGY+DIREHLGQN VGLDVLAGNRTSDQ RPLVP
Sbjct  121  GFGTLSDRIDEHPPGDYSAVLSDTDVQGYSDIREHLGQNAVGLDVLAGNRTSDQLRPLVP  180

Query  190  AMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDY  249
            AMFS VLSRLRRTH VI++DT+ DLEH VMK VL++TDTLVFVSGITAD+SRPVLRAVDY
Sbjct  181  AMFSGVLSRLRRTHNVIIVDTAADLEHPVMKPVLENTDTLVFVSGITADKSRPVLRAVDY  240

Query  250  LRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDT  309
            L AQGYHELVSR+TVILNH+  + D  A+AYLTERF+K GA VE MP+D HLAKGGIID 
Sbjct  241  LAAQGYHELVSRATVILNHSSPVEDGAAVAYLTERFSKTGATVEVMPYDAHLAKGGIIDV  300

Query  310  VHELNKKSRLRLFEITAGLADKYVPDAER  338
             HE+ KK+RLRLFEITAGLADK+VPD ER
Sbjct  301  HHEVKKKTRLRLFEITAGLADKFVPDTER  329


>gi|254821256|ref|ZP_05226257.1| hypothetical protein MintA_15062 [Mycobacterium intracellulare 
ATCC 13950]
Length=251

 Score =  442 bits (1136),  Expect = 5e-122, Method: Compositional matrix adjust.
 Identities = 211/236 (90%), Positives = 227/236 (97%), Gaps = 0/236 (0%)

Query  104  TTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIRE  163
            TT+ AC+GGVFRECRP+NVIAIDAVP FGTLADRID+SPPGDY AIINDTDVQGYADIRE
Sbjct  14   TTLTACLGGVFRECRPQNVIAIDAVPGFGTLADRIDDSPPGDYTAIINDTDVQGYADIRE  73

Query  164  HLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVL  223
            HLGQN +GLDVLAGNRTSDQPRPLVPAMFS VLSRLRRTHTV+++DTSPDLEH+VMK VL
Sbjct  74   HLGQNAIGLDVLAGNRTSDQPRPLVPAMFSGVLSRLRRTHTVMIVDTSPDLEHEVMKPVL  133

Query  224  QSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTE  283
            ++TDTLVFVSGITADRSRPVLRAVDYLR+QGYHELVSRSTVI+NHTD ITDKDALAYLTE
Sbjct  134  ENTDTLVFVSGITADRSRPVLRAVDYLRSQGYHELVSRSTVIVNHTDQITDKDALAYLTE  193

Query  284  RFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERA  339
            RFTKVGA VEA+PFDPHLAKGGIIDTVHEL KK+RLRLFEITAGLADKY+PDAERA
Sbjct  194  RFTKVGATVEALPFDPHLAKGGIIDTVHELKKKTRLRLFEITAGLADKYIPDAERA  249


>gi|121639798|ref|YP_980022.1| hypothetical protein BCG_3943c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224992293|ref|YP_002646983.1| hypothetical protein JTY_3945 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121495446|emb|CAL73933.1| Conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224775409|dbj|BAH28215.1| hypothetical protein JTY_3945 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341603819|emb|CCC66500.1| conserved membrane protein [Mycobacterium bovis BCG str. Moreau 
RDJ]
Length=220

 Score =  439 bits (1128),  Expect = 4e-121, Method: Compositional matrix adjust.
 Identities = 219/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%)

Query  122  VIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTS  181
            +IAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTS
Sbjct  1    MIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTS  60

Query  182  DQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSR  241
            DQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSR
Sbjct  61   DQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSR  120

Query  242  PVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHL  301
            PVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHL
Sbjct  121  PVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHL  180

Query  302  AKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  341
            AKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ
Sbjct  181  AKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAAQ  220


>gi|108797042|ref|YP_637239.1| hypothetical protein Mmcs_0061 [Mycobacterium sp. MCS]
 gi|119866127|ref|YP_936079.1| hypothetical protein Mkms_0070 [Mycobacterium sp. KMS]
 gi|126432664|ref|YP_001068355.1| hypothetical protein Mjls_0051 [Mycobacterium sp. JLS]
 gi|108767461|gb|ABG06183.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119692216|gb|ABL89289.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|126232464|gb|ABN95864.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=319

 Score =  199 bits (506),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 110/304 (37%), Positives = 174/304 (58%), Gaps = 2/304 (0%)

Query  30   SVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQ  89
            S +D +R+ +L  PR+ PP  GWR++VY +SF +INPG+SP E     L+ ++R  +R  
Sbjct  6    SYADWIRVDELVPPRRTPPAHGWRRWVYRLSFGRINPGQSPEELRQLELENKVRGVLRGH  65

Query  90   YVITVVSGKGGVGVTTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAA  148
            Y + V+   G    TT++A IG VF E R ++ V+AIDA  +FG L  R+D +  G Y  
Sbjct  66   YKVGVMGKGGVG-KTTVSASIGSVFAELRQDDRVVAIDADTAFGKLGSRVDPNAQGSYWE  124

Query  149  IINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVI  208
            + +D  ++ +AD+R  +G N  GL VLAG  +  + R L PA++    SRL R  ++ ++
Sbjct  125  LASDQHLESFADVRSRVGNNAAGLFVLAGEGSPARRRVLDPAIYREAASRLDRYFSISIV  184

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D S  ++  V + VL+  D L+ VS    D +    + +D+L A+G   L+ R+ V+LN 
Sbjct  185  DCSSTMDSPVTQEVLRDLDALIVVSSPWVDGAAAAGQTLDWLAARGMTGLLQRTVVVLND  244

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
            +D   DK   + L ++F   G  V  +PFD HL  GG+I    E++  +R +  E+ A L
Sbjct  245  SDGHADKRTRSILAQQFAGHGQRVIEIPFDGHLRPGGVISGTREMSPAARRKFLELAAAL  304

Query  329  ADKY  332
            AD +
Sbjct  305  ADHF  308


>gi|119855164|ref|YP_935769.1| ATPase involved in chromosome partitioning-like protein [Mycobacterium 
sp. KMS]
 gi|119697882|gb|ABL94954.1| ATPase involved in chromosome partitioning-like protein [Mycobacterium 
sp. KMS]
Length=532

 Score =  195 bits (495),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 114/304 (38%), Positives = 173/304 (57%), Gaps = 2/304 (0%)

Query  30   SVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQ  89
            S  D++R T+L   RKIPPG GWRK +Y  +F  +N G+SP ERH   L+ +IR  +R +
Sbjct  219  SYVDSIRPTELVPTRKIPPGKGWRKVLYKSTFGLLNFGQSPDERHLAELEAKIRSLLRGR  278

Query  90   YVITVVSGKGGVGVTTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAA  148
            Y I V+   G    TT+AA +G +F E R ++ V+AIDA  +FG L  R+D +  G Y  
Sbjct  279  YKIGVLGKGGVG-KTTIAAGVGSIFAELRQDDRVVAIDADTAFGKLGLRVDPNAKGSYWE  337

Query  149  IINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVI  208
            +  D D++ +AD+R  +G NT GL VLAG   + + R L P ++     RL    T+ +I
Sbjct  338  LAADQDLRTFADVRSRVGNNTAGLFVLAGESATARRRILEPNIYREATGRLDNHFTLSII  397

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D    ++  V + VL+  D L+ VS +  D +    + ++ L   G+  L+ R+ V+LN 
Sbjct  398  DCGSTMDSPVTREVLRDLDALIVVSSMWVDGASAAAQTMELLANTGHTGLLHRTVVVLND  457

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
             D   DK     L E+F++ G  V  +PFD HL  GG+ID  +E++K +R R  EI A +
Sbjct  458  GDGHADKRTREVLHEQFSQRGQRVVEVPFDRHLRPGGVIDVQNEIDKVTRRRFIEIAAAI  517

Query  329  ADKY  332
            A+ +
Sbjct  518  AEHF  521


>gi|120401097|ref|YP_950926.1| hypothetical protein Mvan_0069 [Mycobacterium vanbaalenii PYR-1]
 gi|119953915|gb|ABM10920.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=390

 Score =  188 bits (477),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 116/301 (39%), Positives = 172/301 (58%), Gaps = 2/301 (0%)

Query  30   SVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQ  89
            S ++ +R  DL   RK+ PG+GWR  +Y  SF  IN G SP ++    L+  IR  +R +
Sbjct  80   SYAEWIRPADLVPHRKVVPGSGWRLALYKASFGLINLGPSPEDKRVAELEATIRTPLRGR  139

Query  90   YVITVVSGKGGVGVTTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAA  148
            + I V+  KGGVG TT++A IG V  E R ++ V+A+DA  +FG L  R+D    G +  
Sbjct  140  FKIGVMG-KGGVGKTTVSASIGSVLAEIRQDDRVVAVDADTAFGKLGSRVDPRAQGSFWE  198

Query  149  IINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVI  208
            +  D  ++ +ADIR HLG N  GL VLAG  T  + R L PA++    +RL R  T+ VI
Sbjct  199  LAADRHLEAFADIRNHLGCNAAGLFVLAGEATPARRRVLDPAIYREATTRLDRHFTISVI  258

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D S  ++  V + VL+  D LV VS    D +    + +D+L A+G  +L+ R+ V+LN 
Sbjct  259  DCSSTMDSPVTQEVLRDLDALVVVSSPWVDGAAAAGQTLDWLAARGLTDLLQRTVVVLND  318

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
            +D   DK     L ++F+  G +V  +PFD HL  GG+ID   E++  +R +  E+ A L
Sbjct  319  SDGHADKRTRGILAQQFSGHGQLVIEVPFDGHLRPGGVIDGTGEMSPSARRKFIEVVAAL  378

Query  329  A  329
            A
Sbjct  379  A  379


>gi|118471679|ref|YP_884472.1| hypothetical protein MSMEG_0053 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118172966|gb|ABK73862.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=462

 Score =  186 bits (473),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 108/304 (36%), Positives = 168/304 (56%), Gaps = 3/304 (0%)

Query  30   SVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQ  89
            S +D +R +DL  P++ PP  GWR  VY  +F  +NPG S  E     L+ +IR  +R  
Sbjct  150  SYADRIRASDLVPPKRQPPSGGWRLLVYRATFGLVNPGPSAEELRQAELEAKIRGVLRGH  209

Query  90   YVITVVSGKGGVGVTTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAA  148
            Y I V+   G    TT++A IG +F   R ++ V+AIDA  SFG L  R+D    G Y  
Sbjct  210  YKIGVMGKGGVG-KTTVSATIGSIFAHLRQDDRVVAIDADTSFGKLGSRVDPRAHGSYWE  268

Query  149  IINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVI  208
            + +D +++ +AD+R  +G N+ GL VLAG  T  + R L  A++   ++RL +  ++ V+
Sbjct  269  LTSDKNLETFADVRSRVGNNSAGLFVLAGESTPARRRVLDAAIYREAVTRLDKHFSISVV  328

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D S  ++  V + VL+  D L+ VS    D +    + +D+L A G   L+ R+ V+LN 
Sbjct  329  DCSSTMDSPVTQEVLRDLDALIVVSSPWVDGAATAGQTLDWLSANGMTRLLQRTVVVLND  388

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
            +D   DK   + L  +F   G  V  +PFD HL  GG++D + E++ K R +  E+ A L
Sbjct  389  SDGHADKRTRSILLNQFAGQGQAVVEIPFDGHLRPGGVVD-IQEMSPKVRRKFLEVAAAL  447

Query  329  ADKY  332
            AD +
Sbjct  448  ADHF  451


>gi|296165448|ref|ZP_06847984.1| ATPase involved in chromosome partitioning family protein [Mycobacterium 
parascrofulaceum ATCC BAA-614]
 gi|295899188|gb|EFG78658.1| ATPase involved in chromosome partitioning family protein [Mycobacterium 
parascrofulaceum ATCC BAA-614]
Length=423

 Score =  186 bits (471),  Expect = 6e-45, Method: Compositional matrix adjust.
 Identities = 110/298 (37%), Positives = 169/298 (57%), Gaps = 2/298 (0%)

Query  28   RDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIR  87
            R + +D +R ++L   ++IPP  GWRK +Y  +F  INPG+S  ER   +LQ +I+  +R
Sbjct  107  RYNYTDNIRSSELLPSKRIPPTRGWRKVLYRGTFKLINPGQSRDEREQDDLQRQIQSLLR  166

Query  88   RQYVITVVSGKGGVGVTTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDY  146
             +Y I V+   G    +T++A +G VF + R E+ V+AIDA  +FG LA RID    G Y
Sbjct  167  GKYKIGVLGKGGVG-KSTISASVGSVFADLRKEDRVVAIDADTAFGKLASRIDPDVSGSY  225

Query  147  AAIINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVI  206
              +  D  +  +ADIR  LG N  GL VL G   + + R L  A++ A   +L R  T+ 
Sbjct  226  WELAADQHLDSFADIRGRLGSNKAGLYVLGGESATARRRVLDSAIYQAATYQLDRHFTLS  285

Query  207  VIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVIL  266
            ++D    L+  V +AVL   D L+ VS    D +    + +++L  +GY  L++R+ V+L
Sbjct  286  IVDCGSTLDSPVTRAVLNDLDALIVVSSPWWDGASAAGQTMEWLANEGYTSLLNRTVVVL  345

Query  267  NHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEI  324
            N +D  + K   A L ERF+K G  V  +PFD HL  GG+ID V ++N+ +   L ++
Sbjct  346  NDSDGHSPKRDRALLVERFSKGGQKVIELPFDEHLRPGGVIDLVEDVNRNTYRALLKV  403


>gi|294995170|ref|ZP_06800861.1| hypothetical protein Mtub2_11807 [Mycobacterium tuberculosis 
210]
Length=314

 Score =  176 bits (445),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 100/284 (36%), Positives = 151/284 (54%), Gaps = 2/284 (0%)

Query  44   RKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGV  103
            R  P   GWR+ V  V+F  +  G S  +R     +  IR  +   + + V+ GKGGVG 
Sbjct  13   RTRPGERGWRRMVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVL-GKGGVGK  71

Query  104  TTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIR  162
            T++AAC+G +  E R ++ ++ IDA  +FG L+ RID    G +  +  DT+++ + DI 
Sbjct  72   TSVAACVGSILAELRQQDRIVGIDADTAFGRLSSRIDPRAAGSFWELTTDTNLRSFTDIT  131

Query  163  EHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAV  222
              LG+N+ GL VLAG   S   R L PA++     RL     + VID    +E  V + V
Sbjct  132  ARLGRNSAGLYVLAGQPASGPRRVLDPAIYREAALRLDHHFAISVIDCGSSMEAAVTQEV  191

Query  223  LQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLT  282
            L+  D L+ VS   AD +      +++L   G   L+ RS V+LN +D   DK   + L 
Sbjct  192  LRDVDALIVVSSPWADGASAAANTIEWLSDYGLTGLLRRSIVVLNDSDGHADKRTKSLLA  251

Query  283  ERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITA  326
            + F   G  V  +PFDPHL  GG+ID  HE+   +RL++ ++ A
Sbjct  252  QEFIDHGQPVVEVPFDPHLRPGGVIDMSHEMAPTTRLKILQVAA  295


>gi|145221371|ref|YP_001132049.1| hypothetical protein Mflv_0776 [Mycobacterium gilvum PYR-GCK]
 gi|145213857|gb|ABP43261.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=380

 Score =  175 bits (444),  Expect = 9e-42, Method: Compositional matrix adjust.
 Identities = 107/304 (36%), Positives = 166/304 (55%), Gaps = 2/304 (0%)

Query  30   SVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQ  89
            + ++ +R  DL   RK  PG GWR  +   +F  +N G SP ER    L+  IR  +R  
Sbjct  67   TYTERIRPADLVPSRKPVPGHGWRLALLKATFGLVNVGPSPDERRAAALETAIRAPLRGH  126

Query  90   YVITVVSGKGGVGVTTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAA  148
            + + V+   G    TT++ACIG +F E R E+ V+A+DA  +FG L  R+D      +  
Sbjct  127  FKVGVMGKGGVG-KTTVSACIGSLFAELRHEDRVVAVDADTAFGKLGSRVDPRARRSFWE  185

Query  149  IINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVI  208
            +  D  ++ +ADIR HLG N  GL VLAG  +  + R L  A++   ++RL R  T+ V+
Sbjct  186  LTADQYLETFADIRNHLGSNAAGLFVLAGEASPARRRVLDAAIYREAMARLDRHFTITVV  245

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D S  ++  V + VL+  D LV VS    D +    + +D+L A+G   L+  + V+LN 
Sbjct  246  DCSSTMDSPVTEEVLRDLDALVVVSSPWVDGAAAAGQTLDWLAARGMTTLLQHTVVVLND  305

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
            +D   DK     L ++F+  G +V  +PFD HL  GG+ID   ++++ +R +L E+ A L
Sbjct  306  SDGHADKRTRKVLAQQFSGHGQLVVEVPFDGHLRPGGVIDGTAQMSRPARRKLVEVCAAL  365

Query  329  ADKY  332
            A  Y
Sbjct  366  AAFY  369


>gi|315441745|ref|YP_004074624.1| ATPase involved in chromosome partitioning [Mycobacterium sp. 
Spyr1]
 gi|315260048|gb|ADT96789.1| ATPase involved in chromosome partitioning [Mycobacterium sp. 
Spyr1]
Length=395

 Score =  175 bits (443),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 108/313 (35%), Positives = 169/313 (54%), Gaps = 2/313 (0%)

Query  30   SVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQ  89
            + +D +R  DL   RK  PG GWR  +   +F  +N G SP ER    L+  IR  +R  
Sbjct  82   TYTDRIRPADLVPSRKPLPGHGWRLALLKATFGLVNVGPSPEERRSAALEAAIRAPLRGH  141

Query  90   YVITVVSGKGGVGVTTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAA  148
            + + V+   G    TT++ACIG +F E R ++ V+A+DA  +FG L  R+D      +  
Sbjct  142  FKVGVMGKGGVG-KTTVSACIGSLFAELRHDDRVVAVDADTAFGKLGSRVDPRARHSFWE  200

Query  149  IINDTDVQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVI  208
            +  D  ++ +ADIR HLG N  GL VLAG  +  + R L  A++    +RL R  T+ V+
Sbjct  201  LTADQYLETFADIRHHLGSNAAGLFVLAGEESPARRRVLDAAVYREATARLDRYFTITVV  260

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D S  ++  V + VL+  D LV VS    D +    + +D+L A+G   L+  + V+LN 
Sbjct  261  DCSSTMDSPVTEEVLRDLDALVVVSSPWVDGAAAAGQTLDWLVARGMTTLLQHTVVVLND  320

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
            +D   DK     L ++F+  G +V  +PFD HL  GG+ID   ++++ +R +L E+ A L
Sbjct  321  SDGHADKRTKRVLAQQFSGHGQLVVEVPFDGHLRPGGVIDGTAQMSRTARSKLVEVCAAL  380

Query  329  ADKYVPDAERAAQ  341
            A  +    +R+ Q
Sbjct  381  AAFFPTQDDRSRQ  393


>gi|31795034|ref|NP_857527.1| hypothetical protein Mb3890 [Mycobacterium bovis AF2122/97]
 gi|31620632|emb|CAD96076.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
Length=390

 Score =  174 bits (442),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 100/284 (36%), Positives = 151/284 (54%), Gaps = 2/284 (0%)

Query  44   RKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGV  103
            R  P   GWR+ V  V+F  +  G S  +R     +  IR  +   + + V+ GKGGVG 
Sbjct  89   RTRPGERGWRRMVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVL-GKGGVGK  147

Query  104  TTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIR  162
            T++AAC+G +  E R ++ ++ IDA  +FG L+ RID    G +  +  DT+++ + DI 
Sbjct  148  TSVAACVGSILAELRQQDRIVGIDADTAFGRLSSRIDPRAAGSFWELTTDTNLRSFTDIT  207

Query  163  EHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAV  222
              LG+N+ GL VLAG   S   R L PA++     RL     + VID    +E  V + V
Sbjct  208  ARLGRNSAGLYVLAGQPASGPRRALDPAIYREAALRLDHHFAISVIDCGSSMEAAVTQEV  267

Query  223  LQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLT  282
            L+  D L+ VS   AD +      +++L   G   L+ RS V+LN +D   DK   + L 
Sbjct  268  LRDVDALIVVSSPWADGASAAANTIEWLSDYGLTGLLRRSIVVLNDSDGHADKRTKSLLA  327

Query  283  ERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITA  326
            + F   G  V  +PFDPHL  GG+ID  HE+   +RL++ ++ A
Sbjct  328  QEFIDHGQPVVEVPFDPHLRPGGVIDMSHEMAPTTRLKILQVAA  371


>gi|289572119|ref|ZP_06452346.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289545874|gb|EFD49521.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=386

 Score =  174 bits (440),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 100/284 (36%), Positives = 151/284 (54%), Gaps = 2/284 (0%)

Query  44   RKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGV  103
            R  P   GWR+ V  V+F  +  G S  +R     +  IR  +   + + V+ GKGGVG 
Sbjct  95   RTRPGERGWRRMVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVL-GKGGVGK  153

Query  104  TTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIR  162
            T++AAC+G +  E R ++ ++ IDA  +FG L+ RID    G +  +  DT+++ + DI 
Sbjct  154  TSVAACVGSILAELRQQDRIVGIDADTAFGRLSSRIDPRAAGSFWELTTDTNLRSFTDIT  213

Query  163  EHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAV  222
              LG+N+ GL VLAG   S   R L PA++     RL     + VID    +E  V + V
Sbjct  214  ARLGRNSAGLYVLAGQPASGPRRVLDPAIYREAALRLDHHFAISVIDCGSSMEAAVTQEV  273

Query  223  LQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLT  282
            L+  D L+ VS   AD +      +++L   G   L+ RS V+LN +D   DK   + L 
Sbjct  274  LRDVDALIVVSSPWADGASAAANTIEWLSDYGLTGLLRRSIVVLNDSDGHADKRTKSLLA  333

Query  283  ERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITA  326
            + F   G  V  +PFDPHL  GG+ID  HE+   +RL++ ++ A
Sbjct  334  QEFIDHGQPVVEVPFDPHLRPGGVIDMSHEMAPTTRLKILQVAA  377


>gi|340628832|ref|YP_004747284.1| hypothetical protein MCAN_38821 [Mycobacterium canettii CIPT 
140010059]
 gi|340007022|emb|CCC46213.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=390

 Score =  174 bits (440),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 100/284 (36%), Positives = 151/284 (54%), Gaps = 2/284 (0%)

Query  44   RKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGV  103
            R  P   GWR  V  V+F  +  G S  +R     +  IR  +   + + V+ GKGGVG 
Sbjct  89   RTRPGERGWRHMVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVL-GKGGVGK  147

Query  104  TTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIR  162
            T++AAC+G +  E R ++ ++ IDA  +FG L+ RID    G +  +  DT+++ + DI 
Sbjct  148  TSVAACVGSILAELRQQDRIVGIDADTAFGRLSSRIDPRAAGSFWELTTDTNLRSFTDIT  207

Query  163  EHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAV  222
              LG+N+ GL VLAG   S   R L PA++     RL     + VID    +E  V + V
Sbjct  208  ARLGRNSAGLYVLAGQPASGPRRVLDPAIYREAALRLDHHFAISVIDCGSSMEAAVTQEV  267

Query  223  LQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLT  282
            L+  D L+ VS   AD +    + +++L   G   L+ RS V+LN +D   DK   + L 
Sbjct  268  LRDVDALIVVSSPWADGASAAAKTIEWLSDYGLTGLLRRSIVVLNDSDGHADKRTKSLLA  327

Query  283  ERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITA  326
            + F   G  V  +PFDPHL  GG+ID  HE+   +RL++ ++ A
Sbjct  328  QEFIDHGQPVVEVPFDPHLRPGGVIDMSHEMAPTTRLKILQVAA  371


>gi|15610996|ref|NP_218377.1| hypothetical protein Rv3860 [Mycobacterium tuberculosis H37Rv]
 gi|15843493|ref|NP_338530.1| hypothetical protein MT3975 [Mycobacterium tuberculosis CDC1551]
 gi|148663728|ref|YP_001285251.1| hypothetical protein MRA_3900 [Mycobacterium tuberculosis H37Ra]
 59 more sequence titles
 
gi|148825069|ref|YP_001289823.1| hypothetical protein TBFG_13896 [Mycobacterium tuberculosis F11]
 gi|167969987|ref|ZP_02552264.1| hypothetical protein MtubH3_18928 [Mycobacterium tuberculosis 
H37Ra]
 gi|253800911|ref|YP_003033913.1| hypothetical protein TBMG_03909 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233349|ref|ZP_04926675.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254366405|ref|ZP_04982449.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254548865|ref|ZP_05139312.1| hypothetical protein Mtube_00100 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289441301|ref|ZP_06431045.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289445462|ref|ZP_06435206.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289556130|ref|ZP_06445340.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289747703|ref|ZP_06507081.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289748394|ref|ZP_06507772.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289755994|ref|ZP_06515372.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760029|ref|ZP_06519407.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289764050|ref|ZP_06523428.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|297636546|ref|ZP_06954326.1| hypothetical protein MtubK4_20575 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733541|ref|ZP_06962659.1| hypothetical protein MtubKR_20720 [Mycobacterium tuberculosis 
KZN R506]
 gi|298527335|ref|ZP_07014744.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306778754|ref|ZP_07417091.1| hypothetical protein TMBG_02401 [Mycobacterium tuberculosis SUMu002]
 gi|306786782|ref|ZP_07425104.1| hypothetical protein TMCG_01371 [Mycobacterium tuberculosis SUMu003]
 gi|306786911|ref|ZP_07425233.1| hypothetical protein TMDG_01819 [Mycobacterium tuberculosis SUMu004]
 gi|306791464|ref|ZP_07429766.1| hypothetical protein TMEG_00360 [Mycobacterium tuberculosis SUMu005]
 gi|306795532|ref|ZP_07433834.1| hypothetical protein TMFG_02098 [Mycobacterium tuberculosis SUMu006]
 gi|306801506|ref|ZP_07438174.1| hypothetical protein TMHG_02932 [Mycobacterium tuberculosis SUMu008]
 gi|306805713|ref|ZP_07442381.1| hypothetical protein TMGG_01407 [Mycobacterium tuberculosis SUMu007]
 gi|306974343|ref|ZP_07487004.1| hypothetical protein TMJG_01117 [Mycobacterium tuberculosis SUMu010]
 gi|307082049|ref|ZP_07491219.1| hypothetical protein TMKG_01111 [Mycobacterium tuberculosis SUMu011]
 gi|307086660|ref|ZP_07495773.1| hypothetical protein TMLG_00356 [Mycobacterium tuberculosis SUMu012]
 gi|313660872|ref|ZP_07817752.1| hypothetical protein MtubKV_20715 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633854|ref|YP_004725496.1| hypothetical protein MAF_38750 [Mycobacterium africanum GM041182]
 gi|1781096|emb|CAB06230.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13883866|gb|AAK48344.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124603142|gb|EAY61417.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151917|gb|EBA43962.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507880|gb|ABQ75689.1| hypothetical protein MRA_3900 [Mycobacterium tuberculosis H37Ra]
 gi|148723596|gb|ABR08221.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253322415|gb|ACT27018.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289414220|gb|EFD11460.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289418420|gb|EFD15621.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440762|gb|EFD23255.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289688231|gb|EFD55719.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289688981|gb|EFD56410.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289696581|gb|EFD64010.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711556|gb|EFD75572.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289715593|gb|EFD79605.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497129|gb|EFI32423.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308328236|gb|EFP17087.1| hypothetical protein TMBG_02401 [Mycobacterium tuberculosis SUMu002]
 gi|308328634|gb|EFP17485.1| hypothetical protein TMCG_01371 [Mycobacterium tuberculosis SUMu003]
 gi|308336379|gb|EFP25230.1| hypothetical protein TMDG_01819 [Mycobacterium tuberculosis SUMu004]
 gi|308339976|gb|EFP28827.1| hypothetical protein TMEG_00360 [Mycobacterium tuberculosis SUMu005]
 gi|308343975|gb|EFP32826.1| hypothetical protein TMFG_02098 [Mycobacterium tuberculosis SUMu006]
 gi|308347759|gb|EFP36610.1| hypothetical protein TMGG_01407 [Mycobacterium tuberculosis SUMu007]
 gi|308351696|gb|EFP40547.1| hypothetical protein TMHG_02932 [Mycobacterium tuberculosis SUMu008]
 gi|308356333|gb|EFP45184.1| hypothetical protein TMJG_01117 [Mycobacterium tuberculosis SUMu010]
 gi|308360289|gb|EFP49140.1| hypothetical protein TMKG_01111 [Mycobacterium tuberculosis SUMu011]
 gi|308363924|gb|EFP52775.1| hypothetical protein TMLG_00356 [Mycobacterium tuberculosis SUMu012]
 gi|326905696|gb|EGE52629.1| hypothetical protein TBPG_03658 [Mycobacterium tuberculosis W-148]
 gi|328460639|gb|AEB06062.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339333210|emb|CCC28944.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|344221700|gb|AEN02331.1| hypothetical protein MTCTRI2_3939 [Mycobacterium tuberculosis 
CTRI-2]
Length=390

 Score =  174 bits (440),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 100/284 (36%), Positives = 151/284 (54%), Gaps = 2/284 (0%)

Query  44   RKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGV  103
            R  P   GWR+ V  V+F  +  G S  +R     +  IR  +   + + V+ GKGGVG 
Sbjct  89   RTRPGERGWRRMVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVL-GKGGVGK  147

Query  104  TTMAACIGGVFRECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIR  162
            T++AAC+G +  E R ++ ++ IDA  +FG L+ RID    G +  +  DT+++ + DI 
Sbjct  148  TSVAACVGSILAELRQQDRIVGIDADTAFGRLSSRIDPRAAGSFWELTTDTNLRSFTDIT  207

Query  163  EHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAV  222
              LG+N+ GL VLAG   S   R L PA++     RL     + VID    +E  V + V
Sbjct  208  ARLGRNSAGLYVLAGQPASGPRRVLDPAIYREAALRLDHHFAISVIDCGSSMEAAVTQEV  267

Query  223  LQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLT  282
            L+  D L+ VS   AD +      +++L   G   L+ RS V+LN +D   DK   + L 
Sbjct  268  LRDVDALIVVSSPWADGASAAANTIEWLSDYGLTGLLRRSIVVLNDSDGHADKRTKSLLA  327

Query  283  ERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITA  326
            + F   G  V  +PFDPHL  GG+ID  HE+   +RL++ ++ A
Sbjct  328  QEFIDHGQPVVEVPFDPHLRPGGVIDMSHEMAPTTRLKILQVAA  371


>gi|296168241|ref|ZP_06850214.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896813|gb|EFG76444.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=446

 Score =  172 bits (437),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 105/302 (35%), Positives = 162/302 (54%), Gaps = 12/302 (3%)

Query  40   LAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKG  99
            L  P K PP  GWR+ +Y +S H+IN GE  R   Y NL  ++ R +R  Y I ++S KG
Sbjct  144  LLRPVKPPPSEGWRRLLYELSGHRINLGEGARAARYNNLVAQVNRPLRGCYRIALLSLKG  203

Query  100  GVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDT-DVQGY  158
            GVG TT+AA +G  F   R + V+A+DA P  GTL+ +I          +++D   ++ Y
Sbjct  204  GVGKTTIAATMGATFASIRGDRVVAVDANPDRGTLSQKIPLETSATVRQLLHDAGSIERY  263

Query  159  ADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA-----VLSRLRRTHTVIVIDTSPD  213
            +D+R +  +   GL+VLA      +  P V   F A     VL  L R + +++ D  P 
Sbjct  264  SDVRRYTSKGPSGLEVLA-----SETDPAVSEAFGADDYTRVLDVLERFYGLVLTDCGPG  318

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H VM +VL+  D LV VS  + D +R     +D+L A G+ E+V  S  ++N   + T
Sbjct  319  LLHSVMSSVLEKADVLVVVSSGSIDGARSASATLDWLDAHGHQEMVRNSIAVINGVRART  378

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + + F++    V+ +PFDPHL +G  I+ +  L + +R  L E+ A +AD + 
Sbjct  379  GKVDMNKVVDHFSRRCRAVQVVPFDPHLEEGAEIE-LDRLKRSTREALTELAAIVADGFP  437

Query  334  PD  335
             D
Sbjct  438  GD  439


>gi|41410124|ref|NP_962960.1| hypothetical protein MAP4026 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398957|gb|AAS06576.1| hypothetical protein MAP_4026 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336460498|gb|EGO39393.1| ATPase involved in chromosome partitioning [Mycobacterium avium 
subsp. paratuberculosis S397]
Length=434

 Score =  172 bits (437),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 110/327 (34%), Positives = 170/327 (52%), Gaps = 13/327 (3%)

Query  18   RGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRN  77
            +G P  + H   +    +    L  P + PP  GWR  +Y +S   IN GESPR   Y N
Sbjct  109  QGPPPRQEHLPHTPYPELSTGMLLRPVQPPPSEGWRLLLYKLSGGLINLGESPRAARYNN  168

Query  78   LQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADR  137
            L  ++ R +R  Y +  +S KGGVG TT+AA +G  F   R + V+A+DA P  GTL+ +
Sbjct  169  LVAQVNRPLRGSYRVAFLSLKGGVGKTTIAATLGATFASIRGDRVVAVDANPDRGTLSQK  228

Query  138  IDESPPGDYAAIINDTD-VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA--  194
            I          +++D   ++ Y+D+R +  +   GL+VLA      +  P V   FSA  
Sbjct  229  IPLETAATVRQLLHDAGTIERYSDVRRYTSKGPSGLEVLA-----SETDPAVSEAFSADD  283

Query  195  ---VLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLR  251
               +L  L R + +++ D  P L H VMK+VL+  D LV VS  + D +R     +D+L 
Sbjct  284  YVRILDILERFYGLVLTDCGPGLLHSVMKSVLEKADALVVVSSASIDGARSASATLDWLD  343

Query  252  AQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVH  311
            A G+ +LV  S  ++N       K  +  + + F++    V+ +PFDPHL +G  ID + 
Sbjct  344  AHGHEDLVRNSIAVINGVRPRPGKVDMNKVIDHFSRRCRAVQLVPFDPHLEEGAEID-LD  402

Query  312  ELNKKSRLRLFEITAGLADKYVPDAER  338
             L + +R  L E+ A +AD + P A+R
Sbjct  403  RLRRGTREALTELAAIVADGF-PGAQR  428


>gi|254777052|ref|ZP_05218568.1| hypothetical protein MaviaA2_20624 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=432

 Score =  172 bits (436),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 111/327 (34%), Positives = 169/327 (52%), Gaps = 13/327 (3%)

Query  18   RGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRN  77
            +G P  + H   +    +    L  P + PP  GWR  +Y +S   IN GESPR   Y N
Sbjct  107  QGPPPRQEHLPHTPYPELSTGMLLRPVQPPPSEGWRLLLYKLSGGLINLGESPRAARYNN  166

Query  78   LQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADR  137
            L  ++ R +R  Y +T +S KGGVG TT+AA +G  F   R + V+A+DA P  GTL+ +
Sbjct  167  LVAQVNRPLRGSYRVTFLSLKGGVGKTTIAATLGATFASIRGDRVVAVDANPDRGTLSQK  226

Query  138  IDESPPGDYAAIINDTD-VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA--  194
            I          +++D   ++ Y+D+R +  +   GL+VLA         P V   FSA  
Sbjct  227  IPLETAATVRQLLHDAGTIERYSDVRRYTSKGPSGLEVLASETD-----PAVSEAFSADD  281

Query  195  ---VLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLR  251
               +L  L R + +++ D  P L H VMK+VL   D LV VS  + D +R     +D+L 
Sbjct  282  YVRILDILERFYGLVLTDCGPGLLHSVMKSVLDKADALVVVSSASIDGARSASATLDWLD  341

Query  252  AQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVH  311
            A G+ +LV  S  ++N       K  +  + + F++    V+ +PFDPHL +G  ID + 
Sbjct  342  AHGHEDLVRNSIAVINGVRPRPGKVDMNKVIDHFSRRCRAVQLVPFDPHLEEGAEID-LD  400

Query  312  ELNKKSRLRLFEITAGLADKYVPDAER  338
             L + +R  L E+ A +AD + P A+R
Sbjct  401  RLRRGTREALTELAAIVADGF-PGAQR  426


>gi|118463940|ref|YP_883744.1| hypothetical protein MAV_4615 [Mycobacterium avium 104]
 gi|118165227|gb|ABK66124.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=432

 Score =  171 bits (432),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 110/327 (34%), Positives = 168/327 (52%), Gaps = 13/327 (3%)

Query  18   RGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRN  77
            +G P  + H   +    +    L  P + PP  GWR  +Y +S   IN GESPR   Y N
Sbjct  107  QGPPPRQEHLPHTPYPELSTGMLLRPVQPPPSEGWRLLLYKLSGGLINLGESPRAARYNN  166

Query  78   LQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADR  137
            L  ++ R +R  Y +  +S KGGVG TT+AA +G  F   R + V+A+DA P  GTL+ +
Sbjct  167  LVAQVNRPLRGSYRVAFLSLKGGVGKTTIAATLGATFASIRGDRVVAVDANPDRGTLSQK  226

Query  138  IDESPPGDYAAIINDTD-VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA--  194
            I          +++D   ++ Y+D+R +  +   GL+VLA         P V   FSA  
Sbjct  227  IPLETAATVRQLLHDAGTIERYSDVRRYTSKGPSGLEVLASETD-----PAVSEAFSADD  281

Query  195  ---VLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLR  251
               +L  L R + +++ D  P L H VMK+VL   D LV VS  + D +R     +D+L 
Sbjct  282  YVRILDILERFYGLVLTDCGPGLLHSVMKSVLDKADALVVVSSASIDGARSASATLDWLD  341

Query  252  AQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVH  311
            A G+ +LV  S  ++N       K  +  + + F++    V+ +PFDPHL +G  ID + 
Sbjct  342  AHGHEDLVRNSIAVINGVRPRPGKVDMNKVIDHFSRRCRAVQLVPFDPHLEEGAEID-LD  400

Query  312  ELNKKSRLRLFEITAGLADKYVPDAER  338
             L + +R  L E+ A +AD + P A+R
Sbjct  401  RLRRGTREALTELAAIVADGF-PGAQR  426


>gi|254818926|ref|ZP_05223927.1| hypothetical protein MintA_03321 [Mycobacterium intracellulare 
ATCC 13950]
Length=427

 Score =  169 bits (429),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 107/321 (34%), Positives = 163/321 (51%), Gaps = 12/321 (3%)

Query  18   RGDPSVRHHFRDSVSDTMRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRN  77
            +G P    H   +    +    L  P + PP  GWR  +Y +S   IN GESPR   Y N
Sbjct  102  QGAPQRPEHLPHTPYPELSTGMLLRPVQPPPSDGWRLLLYKMSGGLINLGESPRASRYNN  161

Query  78   LQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADR  137
            L  ++ R +R  Y +  +S KGGVG TT+AA +G  F   R + V+A+DA P  GTL+ +
Sbjct  162  LVAQVNRPLRGSYRVAFLSLKGGVGKTTIAATLGATFASIRGDRVVAVDANPDRGTLSQK  221

Query  138  IDESPPGDYAAIINDTD-VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA--  194
            I          +++D   ++ Y+D+R +  +   GL+VLA         P +   FSA  
Sbjct  222  IPLETAATVRQLLHDAGTIERYSDVRRYTSKGPSGLEVLASETD-----PAISEAFSAED  276

Query  195  ---VLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLR  251
               +L  L R + +++ D  P L H VMK+VL   D LV VS  + D +R     +D+L 
Sbjct  277  YGRILDILERFYGLVLTDCGPGLLHSVMKSVLDRADALVVVSSASIDGARSASATLDWLD  336

Query  252  AQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVH  311
            A G+ +LV  S  ++N       K  +  + E F++    V+ +PFDPHL +G  ID + 
Sbjct  337  AHGHEDLVRNSIAVINGVRPRPGKVDMNKVIEHFSRRCRAVQLVPFDPHLEEGAEID-LE  395

Query  312  ELNKKSRLRLFEITAGLADKY  332
             L + +R  L E+ A +AD +
Sbjct  396  RLRRPTREALTELAAIVADGF  416


>gi|262203526|ref|YP_003274734.1| chromosome partitioning ATPase [Gordonia bronchialis DSM 43247]
 gi|262086873|gb|ACY22841.1| ATPase involved in chromosome partitioning-like protein [Gordonia 
bronchialis DSM 43247]
Length=418

 Score =  168 bits (425),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 99/289 (35%), Positives = 149/289 (52%), Gaps = 1/289 (0%)

Query  45   KIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVT  104
            K  P  GWR+ V+++S   INPGES  +  Y+ L  R+RR +R  Y I V+S KGGVG T
Sbjct  118  KRAPARGWRRAVHTLSAGTINPGESHSDIEYQQLLDRVRRPVRGDYRIAVLSLKGGVGKT  177

Query  105  TMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREH  164
            T    +G  F   R + VIA+DA P  GTLA RI +        ++ D +V  Y+D+R H
Sbjct  178  TTTIGLGSTFASLRGDRVIAVDANPDLGTLAQRIPQQTHSTVRDLLADANVYRYSDVRAH  237

Query  165  LGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQ  224
              Q    L+VLA  R            +  V++ L+R + +I+ D    L H  M  VL 
Sbjct  238  TSQAPSRLEVLASERDPAMAEAFNETEYRGVIAILQRFYNIIITDCGTGLSHSAMNGVLD  297

Query  225  STDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTER  284
              + L+ VS    D +R     +D+L+A GY  LV+R+ V+L+ +   +       L + 
Sbjct  298  LANALILVSSPALDGARSAGATLDWLQAHGYGHLVNRAVVVLSSSRPGSSTIDTNQLGQH  357

Query  285  FTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
            F      V  +PFD HL++G  ID +  ++K +RL   ++ A +AD + 
Sbjct  358  FLTRTRAVHQIPFDDHLSEGADID-LELMSKSTRLAFTDLAATIADDFA  405


>gi|54022798|ref|YP_117040.1| hypothetical protein nfa8310 [Nocardia farcinica IFM 10152]
 gi|54014306|dbj|BAD55676.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=446

 Score =  166 bits (421),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 102/294 (35%), Positives = 150/294 (52%), Gaps = 1/294 (0%)

Query  45   KIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVT  104
            K  PG+GWRK V+ +S   INPG S  ER  + L  RIR+ +R  Y I V+S KGGVG T
Sbjct  152  KRAPGSGWRKAVHHMSGGAINPGMSAEERRLQELVARIRQPVRGDYRIAVLSLKGGVGKT  211

Query  105  TMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREH  164
            T    +G +F   R + VIA+DA P FGTL+ R+          ++ D  ++ Y+D+R H
Sbjct  212  TTTMGLGSIFASIRGDRVIAVDANPDFGTLSQRVPLQTRSTVRDLLLDPSIERYSDVRRH  271

Query  165  LGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQ  224
              Q T  L+VLA  R            + AV   L+R + +I+ D    L H  M  VL 
Sbjct  272  TSQATSRLEVLASERDPAASEAFNDEEYRAVARILQRFYNIILTDCGTGLMHSAMAGVLD  331

Query  225  STDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTER  284
               +LV VS    D +R     +D+L   G+  LV  + V++N     +    +  L E 
Sbjct  332  LAHSLVLVSSAAIDGARSAAATLDWLSLHGHDHLVRNAVVVINLPREGSPNVGVQQLREY  391

Query  285  FTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAER  338
            F      V  +P+D HL++G  ID +H L+K+++    E+ A +AD++  D  R
Sbjct  392  FLSRCRAVHIIPYDQHLSEGAEID-LHRLSKQAKRAYVELAATVADQFGVDHRR  444


>gi|333989168|ref|YP_004521782.1| hypothetical protein JDM601_0528 [Mycobacterium sp. JDM601]
 gi|333485136|gb|AEF34528.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=447

 Score =  166 bits (419),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 103/307 (34%), Positives = 161/307 (53%), Gaps = 12/307 (3%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L    K PP +GWR+ +Y +S   IN GESPR   Y +L  ++ R ++  + I V
Sbjct  139  LSTTSLLRQVKPPPTSGWRRLLYVLSGQLINVGESPRTARYNDLVVQVNRPLQGCHRIAV  198

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F   R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  199  LSLKGGVGKTTVTATLGATFASIRGDRVVAVDANPDRGTLSQKVPMETPATVRHLLRDAD  258

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA-----VLSRLRRTHTVIVI  208
             +Q Y+D+R +  Q    L+VLA      +  P V   FSA      L  L R +++++ 
Sbjct  259  GIQRYSDVRSYTNQGPSRLEVLAS-----ETDPAVSEAFSAEDYARTLQVLERFYSLVLT  313

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D    L H  M AVL   DT++ VS  + D +R     +D+L A G+ ELV  S  ++N 
Sbjct  314  DCGTGLMHSAMSAVLSKADTMIVVSSGSVDGARSASATLDWLDAHGHEELVRNSIAVINA  373

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
                + K  +  + + F++    V  +PFDPHL +G  ID +  L +++R  L E+ A +
Sbjct  374  VRPRSGKVDMQKVVDHFSRRCRAVRLVPFDPHLEEGAEIDMMR-LKRETREALVELAAVV  432

Query  329  ADKYVPD  335
            A+ +  D
Sbjct  433  AEAFPGD  439


>gi|323717444|gb|EGB26648.1| ATPase [Mycobacterium tuberculosis CDC1551A]
 gi|339296666|gb|AEJ48777.1| ATPase [Mycobacterium tuberculosis CCDC5079]
 gi|339300263|gb|AEJ52373.1| ATPase [Mycobacterium tuberculosis CCDC5180]
Length=291

 Score =  164 bits (416),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 95/273 (35%), Positives = 145/273 (54%), Gaps = 2/273 (0%)

Query  55   FVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVF  114
             V  V+F  +  G S  +R     +  IR  +   + + V+ GKGGVG T++AAC+G + 
Sbjct  1    MVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVL-GKGGVGKTSVAACVGSIL  59

Query  115  RECRPEN-VIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQNTVGLD  173
             E R ++ ++ IDA  +FG L+ RID    G +  +  DT+++ + DI   LG+N+ GL 
Sbjct  60   AELRQQDRIVGIDADTAFGRLSSRIDPRAAGSFWELTTDTNLRSFTDITARLGRNSAGLY  119

Query  174  VLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVS  233
            VLAG   S   R L PA++     RL     + VID    +E  V + VL+  D L+ VS
Sbjct  120  VLAGQPASGPRRVLDPAIYREAALRLDHHFAISVIDCGSSMEAAVTQEVLRDVDALIVVS  179

Query  234  GITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVE  293
               AD +      +++L   G   L+ RS V+LN +D   DK   + L + F   G  V 
Sbjct  180  SPWADGASAAANTIEWLSDYGLTGLLRRSIVVLNDSDGHADKRTKSLLAQEFIDHGQPVV  239

Query  294  AMPFDPHLAKGGIIDTVHELNKKSRLRLFEITA  326
             +PFDPHL  GG+ID  HE+   +RL++ ++ A
Sbjct  240  EVPFDPHLRPGGVIDMSHEMAPTTRLKILQVAA  272


>gi|240171278|ref|ZP_04749937.1| hypothetical protein MkanA1_18336 [Mycobacterium kansasii ATCC 
12478]
Length=429

 Score =  164 bits (415),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 104/300 (35%), Positives = 154/300 (52%), Gaps = 12/300 (4%)

Query  45   KIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVT  104
            K PP  GWR+++Y VS   IN GESPR   Y +L  ++ R +R  Y I ++S KGGVG T
Sbjct  130  KPPPSEGWRRWLYMVSGKLINLGESPRVNRYNDLVVQVNRPLRGCYRIALLSLKGGVGKT  189

Query  105  TMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD-VQGYADIRE  163
            T+ A +GG F   R + V+A+DA P  GTL+ ++    P     ++ D D +  Y+D+R 
Sbjct  190  TITATLGGTFASIRGDRVVAVDANPDRGTLSQKVPVETPATVRHLLRDADGIDRYSDVRS  249

Query  164  HLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA-----VLSRLRRTHTVIVIDTSPDLEHDV  218
            +       L+VLA      +  P V   FSA      L  L R + +++ D    L H  
Sbjct  250  YTSVGPSRLEVLA-----SETDPAVSEAFSADDYARTLEILERFYGLVLTDCGTGLLHSA  304

Query  219  MKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDAL  278
            M AVL   D L+ VS  + D +R     +D+L A GY ELV  S  ++N     + K  +
Sbjct  305  MSAVLAKADVLIVVSSASIDGARSASATLDWLDAHGYEELVRGSIAVINAVRPRSGKVDM  364

Query  279  AYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAER  338
              + + F++    V  +PFDPHL +G  I     L +++R  L E+ A +AD +  D  R
Sbjct  365  QKVVDHFSRRCRAVRLVPFDPHLEEGAEI-RFERLKRETREALMELAAVVADGFPNDQRR  423


>gi|183980897|ref|YP_001849188.1| hypothetical protein MMAR_0876 [Mycobacterium marinum M]
 gi|183174223|gb|ACC39333.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=438

 Score =  163 bits (413),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 111/343 (33%), Positives = 171/343 (50%), Gaps = 7/343 (2%)

Query  4    PWNDPNMLDDGAIGRGDPSVRHHFR-DSVSDT----MRITDLAAPRKIPPGTGWRKFVYS  58
            P  DP        G  +P     +R +SV  T    +  + L  P K PP  GWR+ VY 
Sbjct  93   PRVDPTAYGAYYNGPPEPPAEPQYRPESVPQTPYPELSTSMLLRPVKSPPTEGWRRLVYV  152

Query  59   VSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMAACIGGVFRECR  118
            +S   IN GESPR   Y NL  +I R +R  Y I +VS KGGVG TT+ A +G  F   R
Sbjct  153  LSGQLINLGESPRATRYNNLVAQINRPMRGCYRIALVSLKGGVGKTTITATLGSTFASVR  212

Query  119  PENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD-VQGYADIREHLGQNTVGLDVLAG  177
             + V+A+DA P  GTL+ ++    P     +I D + ++ Y+D+R +  Q   G +VLA 
Sbjct  213  GDRVVAVDANPDRGTLSQKVPLETPATVRHLIRDAEGIERYSDVRGYTSQAKNGFEVLAS  272

Query  178  NRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTDTLVFVSGITA  237
            +             ++  L  L R + +++ D    L H  M A+L  +D L+ VS  + 
Sbjct  273  DTDPAASEAFSADDYTRTLDILERFYGLVLTDCGTGLLHSAMSAILAKSDILIVVSSGSI  332

Query  238  DRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSITDKDALAYLTERFTKVGAIVEAMPF  297
            D +R     +D+L A GY ELV  S  ++N     + K  +  + + F +    V  +PF
Sbjct  333  DGARSASATLDWLEAHGYEELVRNSIAVINAVRPRSSKVDMQKVIDHFARRCRAVRLVPF  392

Query  298  DPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYVPDAERAA  340
            DPHL +G  I  +  + +++R  L E+ A +A+ + PD  R++
Sbjct  393  DPHLEEGAEI-VLDRMKRETREALAELAAVVAEGFGPDQRRSS  434


>gi|343927687|ref|ZP_08767155.1| hypothetical protein GOALK_097_01090 [Gordonia alkanivorans NBRC 
16433]
 gi|343762328|dbj|GAA14081.1| hypothetical protein GOALK_097_01090 [Gordonia alkanivorans NBRC 
16433]
Length=496

 Score =  162 bits (411),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 99/288 (35%), Positives = 148/288 (52%), Gaps = 7/288 (2%)

Query  48   PGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKGGVGVTTMA  107
            P  GWR+ V+++S   INPGES  +  Y+ L  R+ R +R  Y I V+S KGGVG TT  
Sbjct  200  PSRGWRRAVHTMSAGAINPGESQGDIAYQQLLERVNRPVRGDYRIAVLSLKGGVGKTTTT  259

Query  108  ACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTDVQGYADIREHLGQ  167
              +G  F   R + VIA+DA P  GTLA RI +        ++ D +V  Y+D+R H  Q
Sbjct  260  VGLGSTFASLRGDRVIAVDANPDLGTLAQRIPQQTRSTVRDLLADQNVYRYSDVRAHTSQ  319

Query  168  NTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPDLEHDVMKAVLQSTD  227
                L+VLA  R            +  V++ L+R + +I+ D    L H  M  VL   +
Sbjct  320  APSRLEVLASERDPAMAEAFNEDEYRGVVTILQRFYNIIITDCGTGLSHSAMNGVLDLAN  379

Query  228  TLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHT---DSITDKDALAYLTER  284
            T++ VS    D +R     +D+L A G+  LVSR+ V+L+ +    S  D D L    + 
Sbjct  380  TIILVSSPALDGARSAGATLDWLEAHGFGHLVSRAVVVLSSSRPGSSTIDTDQLG---QH  436

Query  285  FTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKY  332
            F      V  +PFD HLA+G  +D +  ++K ++    E+ A +AD +
Sbjct  437  FLTRCRAVHKIPFDDHLAEGADVD-LELMSKAAKRSFVELAATIADDF  483


>gi|118469741|ref|YP_885377.1| hypothetical protein MSMEG_0975 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118171028|gb|ABK71924.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=442

 Score =  162 bits (409),  Expect = 9e-38, Method: Compositional matrix adjust.
 Identities = 103/307 (34%), Positives = 160/307 (53%), Gaps = 12/307 (3%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L   RK PP  GWR+++Y  SF ++N GESP+  H ++L  ++   ++  Y I V
Sbjct  121  LTTTALLGRRKSPPTAGWRRWLYLASFKQVNVGESPKVTHRQSLVSQVSHPLQGCYRIAV  180

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F   R + VIA+DA P  GTL+ ++          ++ D +
Sbjct  181  LSLKGGVGKTTITATLGSTFASIRGDRVIAVDANPDRGTLSQKVPLETAATVRHLLRDAE  240

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA-----VLSRLRRTHTVIVI  208
             ++ Y+D+R +  Q    L+VLA    SD   P V   FS+      L  L R +++++ 
Sbjct  241  GIERYSDVRAYTSQGPSRLEVLASE--SD---PAVSEAFSSEDYLRTLEVLERFYSLVLT  295

Query  209  DTSPDLEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNH  268
            D    L H  M AVL   D L+ VS  + D +R     +D+L A G+ +LV  S  +LN 
Sbjct  296  DCGTGLIHSAMSAVLSKADVLIVVSSGSVDGARSAAATLDWLDAHGHQDLVRNSVAVLNA  355

Query  269  TDSITDKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGL  328
                  K  L+ + + F++    V  +PFDPHL +G  I ++  L  K+R  L E+ A +
Sbjct  356  VRPRAGKVDLSKVVDHFSRRCRAVRLVPFDPHLEEGAEI-SLDRLKPKTREALLELAAVV  414

Query  329  ADKYVPD  335
            A  +  D
Sbjct  415  AGDFGSD  421


>gi|15839924|ref|NP_334961.1| hypothetical protein MT0552 [Mycobacterium tuberculosis CDC1551]
 gi|13880062|gb|AAK44775.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=405

 Score =  161 bits (408),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/306 (33%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE PR  H  +L  ++ R +R  Y I V
Sbjct  96   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPRAAHLNDLVAQVNRPLRGCYRIAV  155

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  156  LSLKGGVGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  215

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  L  L R + +++ D    
Sbjct  216  GIERYSDVRGYTSKGPSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTG  275

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  276  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  335

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  336  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  394

Query  334  PDAERA  339
             D  R 
Sbjct  395  GDPRRC  400


>gi|308369424|ref|ZP_07666733.1| hypothetical protein TMBG_03767 [Mycobacterium tuberculosis SUMu002]
 gi|308327658|gb|EFP16509.1| hypothetical protein TMBG_03767 [Mycobacterium tuberculosis SUMu002]
Length=395

 Score =  161 bits (408),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/306 (33%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE PR  H  +L  ++ R +R  Y I V
Sbjct  86   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPRAAHLNDLVAQVNRPLRGCYRIAV  145

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  146  LSLKGGVGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  205

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  L  L R + +++ D    
Sbjct  206  GIERYSDVRGYTSKGPSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTG  265

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  266  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  325

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  326  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  384

Query  334  PDAERA  339
             D  R 
Sbjct  385  GDPRRC  390


>gi|339293577|gb|AEJ45688.1| hypothetical protein CCDC5079_0498 [Mycobacterium tuberculosis 
CCDC5079]
Length=395

 Score =  161 bits (408),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/306 (33%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE PR  H  +L  ++ R +R  Y I V
Sbjct  86   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPRAAHLNDLVAQVNRPLRGCYRIAV  145

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  146  LSLKGGVGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  205

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  L  L R + +++ D    
Sbjct  206  GIERYSDVRGYTSKGLSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTG  265

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  266  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  325

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  326  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  384

Query  334  PDAERA  339
             D  R 
Sbjct  385  GDPRRC  390


>gi|15607670|ref|NP_215044.1| hypothetical protein Rv0530 [Mycobacterium tuberculosis H37Rv]
 gi|31791712|ref|NP_854205.1| hypothetical protein Mb0543 [Mycobacterium bovis AF2122/97]
 gi|121636448|ref|YP_976671.1| hypothetical protein BCG_0573 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 56 more sequence titles
 
gi|148660299|ref|YP_001281822.1| hypothetical protein MRA_0537 [Mycobacterium tuberculosis H37Ra]
 gi|148821732|ref|YP_001286486.1| hypothetical protein TBFG_10541 [Mycobacterium tuberculosis F11]
 gi|224988920|ref|YP_002643607.1| hypothetical protein JTY_0543 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253797462|ref|YP_003030463.1| hypothetical protein TBMG_00537 [Mycobacterium tuberculosis KZN 
1435]
 gi|254230875|ref|ZP_04924202.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|289446076|ref|ZP_06435820.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289552784|ref|ZP_06441994.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289573120|ref|ZP_06453347.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289744240|ref|ZP_06503618.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|297633019|ref|ZP_06950799.1| hypothetical protein MtubK4_02791 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297729995|ref|ZP_06959113.1| hypothetical protein MtubKR_02826 [Mycobacterium tuberculosis 
KZN R506]
 gi|298524012|ref|ZP_07011421.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306774634|ref|ZP_07412971.1| hypothetical protein TMAG_03534 [Mycobacterium tuberculosis SUMu001]
 gi|306783171|ref|ZP_07421493.1| hypothetical protein TMCG_03360 [Mycobacterium tuberculosis SUMu003]
 gi|306787540|ref|ZP_07425862.1| hypothetical protein TMDG_03013 [Mycobacterium tuberculosis SUMu004]
 gi|306792090|ref|ZP_07430392.1| hypothetical protein TMEG_03113 [Mycobacterium tuberculosis SUMu005]
 gi|306796277|ref|ZP_07434579.1| hypothetical protein TMFG_01831 [Mycobacterium tuberculosis SUMu006]
 gi|306802135|ref|ZP_07438803.1| hypothetical protein TMHG_03550 [Mycobacterium tuberculosis SUMu008]
 gi|306806345|ref|ZP_07443013.1| hypothetical protein TMGG_03544 [Mycobacterium tuberculosis SUMu007]
 gi|306966544|ref|ZP_07479205.1| hypothetical protein TMIG_01430 [Mycobacterium tuberculosis SUMu009]
 gi|306970738|ref|ZP_07483399.1| hypothetical protein TMJG_02273 [Mycobacterium tuberculosis SUMu010]
 gi|307078461|ref|ZP_07487631.1| hypothetical protein TMKG_02866 [Mycobacterium tuberculosis SUMu011]
 gi|307083022|ref|ZP_07492135.1| hypothetical protein TMLG_03676 [Mycobacterium tuberculosis SUMu012]
 gi|313657323|ref|ZP_07814203.1| hypothetical protein MtubKV_02821 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339630602|ref|YP_004722244.1| hypothetical protein MAF_05370 [Mycobacterium africanum GM041182]
 gi|340625557|ref|YP_004744009.1| hypothetical protein MCAN_05331 [Mycobacterium canettii CIPT 
140010059]
 gi|2113992|emb|CAB08981.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31617298|emb|CAD93405.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492095|emb|CAL70558.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124599934|gb|EAY58944.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148504451|gb|ABQ72260.1| hypothetical protein MRA_0537 [Mycobacterium tuberculosis H37Ra]
 gi|148720259|gb|ABR04884.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224772033|dbj|BAH24839.1| hypothetical protein JTY_0543 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253318965|gb|ACT23568.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289419034|gb|EFD16235.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289437416|gb|EFD19909.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289537551|gb|EFD42129.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289684768|gb|EFD52256.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|298493806|gb|EFI29100.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308216802|gb|EFO76201.1| hypothetical protein TMAG_03534 [Mycobacterium tuberculosis SUMu001]
 gi|308332015|gb|EFP20866.1| hypothetical protein TMCG_03360 [Mycobacterium tuberculosis SUMu003]
 gi|308335803|gb|EFP24654.1| hypothetical protein TMDG_03013 [Mycobacterium tuberculosis SUMu004]
 gi|308339408|gb|EFP28259.1| hypothetical protein TMEG_03113 [Mycobacterium tuberculosis SUMu005]
 gi|308343272|gb|EFP32123.1| hypothetical protein TMFG_01831 [Mycobacterium tuberculosis SUMu006]
 gi|308347180|gb|EFP36031.1| hypothetical protein TMGG_03544 [Mycobacterium tuberculosis SUMu007]
 gi|308351108|gb|EFP39959.1| hypothetical protein TMHG_03550 [Mycobacterium tuberculosis SUMu008]
 gi|308355752|gb|EFP44603.1| hypothetical protein TMIG_01430 [Mycobacterium tuberculosis SUMu009]
 gi|308359707|gb|EFP48558.1| hypothetical protein TMJG_02273 [Mycobacterium tuberculosis SUMu010]
 gi|308363613|gb|EFP52464.1| hypothetical protein TMKG_02866 [Mycobacterium tuberculosis SUMu011]
 gi|308367269|gb|EFP56120.1| hypothetical protein TMLG_03676 [Mycobacterium tuberculosis SUMu012]
 gi|323721069|gb|EGB30132.1| hypothetical protein TMMG_03906 [Mycobacterium tuberculosis CDC1551A]
 gi|328457248|gb|AEB02671.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339329958|emb|CCC25609.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|340003747|emb|CCC42873.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
 gi|341600464|emb|CCC63134.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344218351|gb|AEM98981.1| hypothetical protein MTCTRI2_0538 [Mycobacterium tuberculosis 
CTRI-2]
Length=405

 Score =  161 bits (407),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 99/306 (33%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE PR  H  +L  ++ R +R  Y I V
Sbjct  96   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPRAAHLNDLVAQVNRPLRGCYRIAV  155

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  156  LSLKGGVGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  215

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  L  L R + +++ D    
Sbjct  216  GIERYSDVRGYTSKGPSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTG  275

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  276  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  335

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  336  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  394

Query  334  PDAERA  339
             D  R 
Sbjct  395  GDPRRC  400


>gi|294996039|ref|ZP_06801730.1| hypothetical protein Mtub2_16463 [Mycobacterium tuberculosis 
210]
 gi|326902359|gb|EGE49292.1| hypothetical protein TBPG_00200 [Mycobacterium tuberculosis W-148]
 gi|339297218|gb|AEJ49328.1| hypothetical protein CCDC5180_0491 [Mycobacterium tuberculosis 
CCDC5180]
Length=405

 Score =  161 bits (407),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 99/306 (33%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE PR  H  +L  ++ R +R  Y I V
Sbjct  96   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPRAAHLNDLVAQVNRPLRGCYRIAV  155

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  156  LSLKGGVGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  215

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  L  L R + +++ D    
Sbjct  216  GIERYSDVRGYTSKGLSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTG  275

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  276  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  335

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  336  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  394

Query  334  PDAERA  339
             D  R 
Sbjct  395  GDPRRC  400


>gi|289441916|ref|ZP_06431660.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289752566|ref|ZP_06511944.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289414835|gb|EFD12075.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289693153|gb|EFD60582.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=405

 Score =  160 bits (406),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 98/306 (33%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE PR  H  +L  ++ R +R  Y I V
Sbjct  96   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPRAAHLNDLVAQVNRPLRGCYRIAV  155

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGG+G TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  156  LSLKGGIGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  215

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  L  L R + +++ D    
Sbjct  216  GIERYSDVRGYTSKGPSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTG  275

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  276  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  335

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  336  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  394

Query  334  PDAERA  339
             D  R 
Sbjct  395  GDPRRC  400


>gi|289749027|ref|ZP_06508405.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689614|gb|EFD57043.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=390

 Score =  160 bits (405),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 98/306 (33%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE PR  H  +L  ++ R +R  Y I V
Sbjct  81   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPRAAHLNDLVAQVNRPLRGCYRIAV  140

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGG+G TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  141  LSLKGGIGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  200

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  L  L R + +++ D    
Sbjct  201  GIERYSDVRGYTSKGPSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTG  260

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  261  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  320

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  321  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  379

Query  334  PDAERA  339
             D  R 
Sbjct  380  GDPRRC  385


>gi|342858961|ref|ZP_08715615.1| hypothetical protein MCOL_08793 [Mycobacterium colombiense CECT 
3035]
 gi|342133202|gb|EGT86405.1| hypothetical protein MCOL_08793 [Mycobacterium colombiense CECT 
3035]
Length=437

 Score =  160 bits (404),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 101/299 (34%), Positives = 156/299 (53%), Gaps = 12/299 (4%)

Query  40   LAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITVVSGKG  99
            L  P   PP  GWR  ++ +S   IN GESPR   Y NL  ++ R +R  Y +  +S KG
Sbjct  134  LLRPVAPPPSDGWRLLLFKLSGGLINLGESPRATRYNNLVAQVNRPLRGSYRVAFLSLKG  193

Query  100  GVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD-VQGY  158
            GVG TT+AA +G  F   R + V+A+DA P  GTL+ +I          +++D   ++ Y
Sbjct  194  GVGKTTIAATLGATFASIRGDRVVAVDANPDRGTLSQKIPLETAATVRQLLHDAGTIERY  253

Query  159  ADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSA-----VLSRLRRTHTVIVIDTSPD  213
            +D+R +  +   GL+VLA      +  P +   FSA     +L  L R + +++ D  P 
Sbjct  254  SDVRRYTSKGPSGLEVLA-----SETDPGISDAFSAEDYGRILDILERFYGLVLTDCGPG  308

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H VM AVL   D LV VS  + D +R     +D+L A G+ +LV  S  ++N      
Sbjct  309  LLHSVMSAVLDKADALVVVSSASIDGARSASATLDWLDAHGHEDLVRNSIAVINGVKPRP  368

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKY  332
             K  +  + + F++    V+ +PFDPHL +G  I+ +  L + +R  L E+ A +AD +
Sbjct  369  GKVDMNKVIDHFSRRCRAVQLVPFDPHLEEGAEIE-LDRLRRGTREALTELAAIVADGF  426


>gi|167966711|ref|ZP_02548988.1| hypothetical protein MtubH3_01033 [Mycobacterium tuberculosis 
H37Ra]
Length=405

 Score =  159 bits (401),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 97/306 (32%), Positives = 156/306 (51%), Gaps = 2/306 (0%)

Query  35   MRITDLAAPRKIPPGTGWRKFVYSVSFHKINPGESPRERHYRNLQGRIRRHIRRQYVITV  94
            +  T L  P K PP  GWR+ +Y +S   IN GE P+  H  +L  ++ R +R  Y I V
Sbjct  96   LATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEGPQAEHLNDLVAQVNRPLRGCYRIAV  155

Query  95   VSGKGGVGVTTMAACIGGVFRECRPENVIAIDAVPSFGTLADRIDESPPGDYAAIINDTD  154
            +S KGGVG TT+ A +G  F + R + V+A+DA P  GTL+ ++    P     ++ D D
Sbjct  156  LSLKGGVGKTTITATLGATFADLRGDRVVAVDANPDRGTLSQKVPLETPATVRHLLRDAD  215

Query  155  -VQGYADIREHLGQNTVGLDVLAGNRTSDQPRPLVPAMFSAVLSRLRRTHTVIVIDTSPD  213
             ++ Y+D+R +  +   GL+VLA +             ++  +  L R + +++ D    
Sbjct  216  GIERYSDVRGYTSKGPSGLEVLASDSDPASSDAFSADDYTRTVDILERFYGLVLTDCGTG  275

Query  214  LEHDVMKAVLQSTDTLVFVSGITADRSRPVLRAVDYLRAQGYHELVSRSTVILNHTDSIT  273
            L H  M AVL  +D LV VS  + D +R     +D+L+A G+ + V  S  ++N      
Sbjct  276  LLHSAMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVNAVRPRA  335

Query  274  DKDALAYLTERFTKVGAIVEAMPFDPHLAKGGIIDTVHELNKKSRLRLFEITAGLADKYV  333
             K  +  + E F++    V  +PFDPHL +G  I  +  L +++R  L E+ A +A  + 
Sbjct  336  GKVDVGKVVEHFSRRCRAVRVVPFDPHLEEGAEI-ALDRLRRETREALTELAAVVAAGFP  394

Query  334  PDAERA  339
             D  R 
Sbjct  395  GDPRRC  400



Lambda     K      H
   0.320    0.137    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 620632698468


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40