BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3892c
Length=399
Score E
Sequences producing significant alignments: (Bits) Value
gi|57117166|ref|YP_178024.1| PPE family protein [Mycobacterium t... 771 0.0
gi|31795065|ref|NP_857558.1| PPE family protein [Mycobacterium b... 769 0.0
gi|340628864|ref|YP_004747316.1| PPE family protein [Mycobacteri... 768 0.0
gi|121639803|ref|YP_980027.1| PPE family protein [Mycobacterium ... 768 0.0
gi|339633882|ref|YP_004725524.1| PPE family protein [Mycobacteri... 768 0.0
gi|15843523|ref|NP_338560.1| PPE family protein [Mycobacterium t... 763 0.0
gi|289760064|ref|ZP_06519442.1| PPE family protein [Mycobacteriu... 747 0.0
gi|254366432|ref|ZP_04982476.1| PPE family protein [Mycobacteriu... 723 0.0
gi|306795562|ref|ZP_07433864.1| PPE family protein [Mycobacteriu... 721 0.0
gi|339296699|gb|AEJ48810.1| PPE family protein [Mycobacterium tu... 644 0.0
gi|307086693|ref|ZP_07495806.1| PPE family protein [Mycobacteriu... 562 4e-158
gi|306778786|ref|ZP_07417123.1| PPE family protein [Mycobacteriu... 559 3e-157
gi|240168372|ref|ZP_04747031.1| PPE family protein [Mycobacteriu... 520 1e-145
gi|212595866|gb|ACJ35529.1| PPE2 [Mycobacterium avium subsp. avium] 501 6e-140
gi|41406256|ref|NP_959092.1| hypothetical protein MAP0158 [Mycob... 489 5e-136
gi|296167008|ref|ZP_06849421.1| PPE family protein [Mycobacteriu... 448 7e-124
gi|342860127|ref|ZP_08716779.1| hypothetical protein MCOL_14650 ... 432 4e-119
gi|254773505|ref|ZP_05215021.1| hypothetical protein MaviaA2_023... 333 3e-89
gi|333988695|ref|YP_004521309.1| PPE family protein [Mycobacteri... 311 1e-82
gi|336457764|gb|EGO36760.1| PPE family protein [Mycobacterium av... 285 9e-75
gi|212596388|gb|ACJ35574.1| PPE2 [Mycobacterium intracellulare A... 257 3e-66
gi|254822562|ref|ZP_05227563.1| hypothetical protein MintA_21714... 238 1e-60
gi|289572149|ref|ZP_06452376.1| PPE family protein [Mycobacteriu... 191 2e-46
gi|254821252|ref|ZP_05226253.1| hypothetical protein MintA_15042... 159 1e-36
gi|336457765|gb|EGO36761.1| hypothetical protein MAPs_20052 [Myc... 154 2e-35
gi|254773208|ref|ZP_05214724.1| hypothetical protein MaviaA2_008... 151 2e-34
gi|333989613|ref|YP_004522227.1| hypothetical protein JDM601_097... 105 1e-20
gi|296165453|ref|ZP_06847989.1| possible PPE protein [Mycobacter... 53.9 5e-05
gi|240170154|ref|ZP_04748813.1| hypothetical protein MkanA1_1262... 53.5 6e-05
gi|118616708|ref|YP_905040.1| PPE family protein [Mycobacterium ... 48.5 0.002
gi|183984212|ref|YP_001852503.1| PPE family protein, PPE18 [Myco... 48.1 0.002
gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacteriu... 45.1 0.021
gi|289446957|ref|ZP_06436701.1| PPE family protein [Mycobacteriu... 40.0 0.76
gi|340626377|ref|YP_004744829.1| PPE family protein [Mycobacteri... 39.7 0.85
gi|339294339|gb|AEJ46450.1| PPE family protein [Mycobacterium tu... 39.3 1.2
gi|294993380|ref|ZP_06799071.1| PPE family protein [Mycobacteriu... 38.9 1.4
gi|253799589|ref|YP_003032590.1| PPE family protein [Mycobacteri... 38.9 1.5
gi|57116852|ref|YP_177801.1| PPE family protein [Mycobacterium t... 38.9 1.5
gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacteriu... 38.9 1.5
gi|121637292|ref|YP_977515.1| PPE family protein [Mycobacterium ... 38.9 1.5
gi|306784092|ref|ZP_07422414.1| PPE family protein [Mycobacteriu... 38.9 1.5
gi|289554847|ref|ZP_06444057.1| PPE family protein [Mycobacteriu... 38.9 1.6
gi|289574028|ref|ZP_06454255.1| PPE family protein [Mycobacteriu... 38.5 1.8
gi|308376701|ref|ZP_07439733.2| PPE family protein [Mycobacteriu... 38.1 2.5
gi|333991172|ref|YP_004523786.1| PPE family protein PPE51_2 [Myc... 37.7 3.3
gi|306783914|ref|ZP_07422236.1| PPE family protein [Mycobacteriu... 37.7 3.7
gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacteri... 37.7 3.9
gi|344221312|gb|AEN01943.1| PE family protein [Mycobacterium tub... 37.4 5.0
>gi|57117166|ref|YP_178024.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148663759|ref|YP_001285282.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|167969430|ref|ZP_02551707.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
9 more sequence titles
Length=399
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/399 (100%), Positives = 399/399 (100%), Gaps = 0/399 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR
Sbjct 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
>gi|31795065|ref|NP_857558.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|148825100|ref|YP_001289854.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|253800942|ref|YP_003033944.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
45 more sequence titles
Length=399
Score = 769 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR
Sbjct 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
>gi|340628864|ref|YP_004747316.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340007054|emb|CCC46245.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=399
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/399 (99%), Positives = 397/399 (99%), Gaps = 0/399 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTA TAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTATTAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR
Sbjct 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
>gi|121639803|ref|YP_980027.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224992298|ref|YP_002646988.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121495451|emb|CAL73938.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224775414|dbj|BAH28220.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603824|emb|CCC66505.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=399
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDG+RSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGIRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR
Sbjct 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
>gi|339633882|ref|YP_004725524.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339333238|emb|CCC28975.1| PPE family protein [Mycobacterium africanum GM041182]
Length=399
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/399 (99%), Positives = 397/399 (99%), Gaps = 0/399 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQ AAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQVAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR
Sbjct 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
>gi|15843523|ref|NP_338560.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13883899|gb|AAK48374.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length=399
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/399 (99%), Positives = 396/399 (99%), Gaps = 0/399 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECM NRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMVNRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAG GMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGCGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR
Sbjct 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDRR 399
>gi|289760064|ref|ZP_06519442.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715628|gb|EFD79640.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=399
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/389 (99%), Positives = 388/389 (99%), Gaps = 0/389 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQA 389
TVGGTPIGGMPVGHAAGGHRGSHGKSEQA
Sbjct 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQA 389
>gi|254366432|ref|ZP_04982476.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134151944|gb|EBA43989.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=376
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/376 (99%), Positives = 376/376 (100%), Gaps = 0/376 (0%)
Query 24 VGTHLANQTAWTTLGASHHASGVASAINTAATAASWLGVGSAASALNVTMLNATLHGLAG 83
+GTHLANQTAWTTLGASHHASGVASAINTAATAASWLGVGSAASALNVTMLNATLHGLAG
Sbjct 1 MGTHLANQTAWTTLGASHHASGVASAINTAATAASWLGVGSAASALNVTMLNATLHGLAG 60
Query 84 WVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSVLWTLTPRIVSLDVE 143
WVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSVLWTLTPRIVSLDVE
Sbjct 61 WVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSVLWTLTPRIVSLDVE 120
Query 144 YFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQAAAAVGQAAAEAAAG 203
YFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQAAAAVGQAAAEAAAG
Sbjct 121 YFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQAAAAVGQAAAEAAAG 180
Query 204 DGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAPQALQAPSGLMQAPM 263
DGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAPQALQAPSGLMQAPM
Sbjct 181 DGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAPQALQAPSGLMQAPM 240
Query 264 SAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGAGGGGAALGGGGMPA 323
SAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGAGGGGAALGGGGMPA
Sbjct 241 SAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGAGGGGAALGGGGMPA 300
Query 324 TSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTTTVGGTPIGGMPVGHAAGGHRGSH 383
TSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTTTVGGTPIGGMPVGHAAGGHRGSH
Sbjct 301 TSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTTTVGGTPIGGMPVGHAAGGHRGSH 360
Query 384 GKSEQAATVRVVDDRR 399
GKSEQAATVRVVDDRR
Sbjct 361 GKSEQAATVRVVDDRR 376
>gi|306795562|ref|ZP_07433864.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308343859|gb|EFP32710.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
Length=406
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/377 (99%), Positives = 375/377 (99%), Gaps = 0/377 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAAS AGGI
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASTAGGI 300
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT
Sbjct 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
Query 361 TVGGTPIGGMPVGHAAG 377
TVGGTPIGGMPVGHAAG
Sbjct 361 TVGGTPIGGMPVGHAAG 377
>gi|339296699|gb|AEJ48810.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=391
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/342 (99%), Positives = 338/342 (99%), Gaps = 0/342 (0%)
Query 10 TPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWLGVGSAASAL 69
TPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWLGVGSAASAL
Sbjct 5 TPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWLGVGSAASAL 64
Query 70 NVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSV 129
NVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSV
Sbjct 65 NVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSV 124
Query 130 LWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQA 189
LWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQA
Sbjct 125 LWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQA 184
Query 190 AAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAP 249
AAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAP
Sbjct 185 AAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAP 244
Query 250 QALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGA 309
QALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGA
Sbjct 245 QALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGA 304
Query 310 GGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALG 351
GGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPS G
Sbjct 305 GGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSRGFG 346
>gi|307086693|ref|ZP_07495806.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308363891|gb|EFP52742.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=291
Score = 562 bits (1448), Expect = 4e-158, Method: Compositional matrix adjust.
Identities = 289/291 (99%), Positives = 289/291 (99%), Gaps = 0/291 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGA 291
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALG G AAPGA
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGSGRAAPGA 291
>gi|306778786|ref|ZP_07417123.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308328126|gb|EFP16977.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length=406
Score = 559 bits (1440), Expect = 3e-157, Method: Compositional matrix adjust.
Identities = 285/286 (99%), Positives = 285/286 (99%), Gaps = 0/286 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG
Sbjct 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP
Sbjct 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGG 286
MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGG
Sbjct 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGG 286
>gi|240168372|ref|ZP_04747031.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=380
Score = 520 bits (1340), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 316/372 (85%), Positives = 344/372 (93%), Gaps = 1/372 (0%)
Query 28 LANQTAWTTLGASHHASGVASAINTAATAASWLGVGSAASALNVTMLNATLHGLAGWVDV 87
+ANQTAWTT+GASHHASG+ASAINTAATAASWLG+GSAASALNVTMLNA+LHGLAGWVDV
Sbjct 1 MANQTAWTTVGASHHASGIASAINTAATAASWLGLGSAASALNVTMLNASLHGLAGWVDV 60
Query 88 KPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSVLWTLTPRIVSLDVEYFGV 147
KPAVVS AIAAFE AN+AMRPAPECMENRDEW VDN INP V LTPRI+SLDVEYFGV
Sbjct 61 KPAVVSAAIAAFEMANSAMRPAPECMENRDEWTVDNHINPLVWGALTPRIISLDVEYFGV 120
Query 148 MWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQAAAAVGQAAAEAAAGDGMR 207
MWPNN+AVGATYGG+LA LAESLAIPPPVATMGASPAAPAQAA+AVGQAAAEAAAGDGMR
Sbjct 121 MWPNNSAVGATYGGILAGLAESLAIPPPVATMGASPAAPAQAASAVGQAAAEAAAGDGMR 180
Query 208 SAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAPQALQAPSGLMQAPMSAMQ 267
SAYQGVQAG++ AGQSTSAGENFGNQ+ TFMQP+Q++MQA PQALQAPSGLMQAPMSA+Q
Sbjct 181 SAYQGVQAGTSTAGQSTSAGENFGNQIGTFMQPVQSMMQAVPQALQAPSGLMQAPMSALQ 240
Query 268 PLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGAGGGGAALGGGGMPATSFT 327
PLQSM+GMFA+PGALGM GAAPGASAASAA G +A +GAGGG A+LGG GM ATSFT
Sbjct 241 PLQSMMGMFASPGALGMSGAAPGASAASAAAGAAATEASLGAGGGSASLGGAGMSATSFT 300
Query 328 RPVSAFESGTSGRPVGLRPSGALGADVVRAP-TTTVGGTPIGGMPVGHAAGGHRGSHGKS 386
RPVSAFESG+SGRPVGLRPSGALGA+ +R+P TTT+ G P+GGMPVGHAA GHRGSHGKS
Sbjct 301 RPVSAFESGSSGRPVGLRPSGALGAEALRSPTTTTMSGAPMGGMPVGHAAAGHRGSHGKS 360
Query 387 EQAATVRVVDDR 398
EQ ATVRVVDDR
Sbjct 361 EQPATVRVVDDR 372
>gi|212595866|gb|ACJ35529.1| PPE2 [Mycobacterium avium subsp. avium]
Length=396
Score = 501 bits (1291), Expect = 6e-140, Method: Compositional matrix adjust.
Identities = 278/398 (70%), Positives = 326/398 (82%), Gaps = 3/398 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE ND+LL AG GVGTH+ANQTAWTTL A+HHASGVASAINTAAT+ASWL
Sbjct 1 MADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GSAASA NVTMLNA+LHGLAGWVDVKPAVV+TAI+A++ A +MRPAPEC+ NR E
Sbjct 61 GAGSAASAANVTMLNASLHGLAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
D INP VL LTPRI SL++EY+G MWPNN+AVGA+YG VL ALAESLAI PP+A+MG
Sbjct 121 TDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYGAVLTALAESLAIAPPIASMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPA+A +A+G++AA AAGDGMR+AYQGVQ G+ GAGQ+ S+G++ G Q+S+ MQP
Sbjct 181 ASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQMSSLMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
+Q +M A PQA+QA +MQAPM MQPLQSM+GMFANPGA+GMGGAAPG SA SA
Sbjct 241 VQELMGAVPQAMQASMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSAVSA---T 297
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
+ + GG +LG G+PATSFTRPVSAFE TSGRPVGLRP+GALGA+ +R TT
Sbjct 298 TGLSAAEAGAGGAGSLGSAGVPATSFTRPVSAFEPATSGRPVGLRPAGALGAEALRPQTT 357
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDR 398
T+ G P+GGMPVGH AGG RGS K+E+ ATVRVVDDR
Sbjct 358 TMSGAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDR 395
>gi|41406256|ref|NP_959092.1| hypothetical protein MAP0158 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394604|gb|AAS02475.1| hypothetical protein MAP_0158 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=396
Score = 489 bits (1258), Expect = 5e-136, Method: Compositional matrix adjust.
Identities = 279/398 (71%), Positives = 327/398 (83%), Gaps = 3/398 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE ND+LL AG GVGTH+ANQTAWTTL A+HHASGVASAINTAAT+ASWL
Sbjct 1 MADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GSAASA NVTMLNA+LHGLAGWVDVKPAVV+TAI+A++ A +MRPAPEC+ NR E
Sbjct 61 GAGSAASAANVTMLNASLHGLAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
D INP VL LTPRI SL++EY+G MWPNN+AVGA+YG VL ALAESLAI PP+A+MG
Sbjct 121 TDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYGAVLTALAESLAIAPPIASMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPA+A +A+G++AA AAGDGMR+AYQGVQ G+ GAGQ+ S+G++ G Q+S+ MQP
Sbjct 181 ASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQMSSLMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
+Q +M A PQA+QAP +MQAPM MQPLQSM+GMFANPGA+GMGGAAPG SA SA
Sbjct 241 VQELMGAVPQAMQAPMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSAVSA---T 297
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
+ + GG +LG G+PATSFTRPVSAFE TSGRPVGLRP+GALGA+ +R TT
Sbjct 298 TGLSAAEAGAGGAGSLGSAGVPATSFTRPVSAFEPATSGRPVGLRPAGALGAEALRPQTT 357
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDR 398
T+ G P+GGMPVGH AGG RGS K+E+ ATVRVVDDR
Sbjct 358 TMSGAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDR 395
>gi|296167008|ref|ZP_06849421.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897638|gb|EFG77231.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=395
Score = 448 bits (1152), Expect = 7e-124, Method: Compositional matrix adjust.
Identities = 289/399 (73%), Positives = 325/399 (82%), Gaps = 6/399 (1%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE NDLLL G GVGTHLANQ AW L A+HHASGVASAINTA T+ASWL
Sbjct 1 MADPGWAARTPEENDLLLKGGVGVGTHLANQAAWMALAATHHASGVASAINTATTSASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GS AS NVTMLNA+LHGLAGWVDVK VV+TAI+A++TAN AMRPAPEC+ NRDEWG
Sbjct 61 GAGSVASVANVTMLNASLHGLAGWVDVKGPVVATAISAYQTANGAMRPAPECIANRDEWG 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
VDN INP VL LTPRIVSLDV+YFGVMWPNN+AVGA+YG +L +L +SLAIPPPVA MG
Sbjct 121 VDNGINPLVLGALTPRIVSLDVQYFGVMWPNNSAVGASYGAILTSLTQSLAIPPPVAGMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAAVG+AAA+ AGDGMRSA+QGVQ G++ AGQ+ S G++F +Q +FM+P
Sbjct 181 ASPAAPAQAAAAVGEAAAQVGAGDGMRSAFQGVQQGTSSAGQAASGGQDFMSQAGSFMEP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
+Q++M A PQ +QAP +MQAPM MQPLQSM+GMFANPGA MGGAA G SA SA
Sbjct 241 VQSMMGAVPQVMQAPMQMMQAPMQMMQPLQSMMGMFANPGA--MGGAATGVSAVSA---T 295
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVR-APT 359
+A GGG A+LG GMPATSFTRPVSAFE G SGRPVGLRPSGALGA+ +R T
Sbjct 296 EVSAVGASGGGGAASLGSAGMPATSFTRPVSAFEPGGSGRPVGLRPSGALGAEAIRPQTT 355
Query 360 TTVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDR 398
T GGTP+GGMPVGH AGG RGS KSEQ ATVRVVDDR
Sbjct 356 TVGGGTPMGGMPVGHGAGGERGSRDKSEQPATVRVVDDR 394
>gi|342860127|ref|ZP_08716779.1| hypothetical protein MCOL_14650 [Mycobacterium colombiense CECT
3035]
gi|342132505|gb|EGT85734.1| hypothetical protein MCOL_14650 [Mycobacterium colombiense CECT
3035]
Length=393
Score = 432 bits (1112), Expect = 4e-119, Method: Compositional matrix adjust.
Identities = 266/398 (67%), Positives = 308/398 (78%), Gaps = 6/398 (1%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE ND+LL AG GV THLANQ AWT L A+HH S +AS INT AT+ASW
Sbjct 1 MADPGWAARTPEENDMLLKAGAGVITHLANQAAWTALAATHHGSSIASTINTVATSASWT 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GS ASA N T LNA+LHGLAGWVDVKPAVVSTA++A++ A +MRPAPEC+ NR E
Sbjct 61 GSGSLASAANATALNASLHGLAGWVDVKPAVVSTAVSAYQMAYGSMRPAPECIGNRTETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
D INP VL LTPRI SL++EYFG MWPNN+AVGA+YG +L AL++SL IPPPVATMG
Sbjct 121 ADYGINPLVLGALTPRITSLELEYFGSMWPNNSAVGASYGTILTALSQSLTIPPPVATMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPAQAAAA+G++AA+ AGDGMR+A QG Q G G GQ+ S G++F NQ S+ MQP
Sbjct 181 ASPAAPAQAAAAIGESAADEGAGDGMRAAMQGAQTGMQGTGQAASGGQDFMNQASSLMQP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
Q +M A PQ +QAP +MQAPM MQPL +GMFANPGA+GMGGA P SA SA
Sbjct 241 AQQLMGAVPQVMQAPMQMMQAPMQMMQPL---MGMFANPGAMGMGGATPAVSAVSA---T 294
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
+ + GGGA+LGG GMPATSFTRPVSAFE TSGRPVGLRP+GALGA+ +R TT
Sbjct 295 TGLSAAEAGAGGGASLGGAGMPATSFTRPVSAFEPATSGRPVGLRPAGALGAEAMRPQTT 354
Query 361 TVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDR 398
T+GG P+GGMPVGH AGG RGS K++Q ATVRVVD R
Sbjct 355 TMGGVPMGGMPVGHGAGGDRGSRDKADQPATVRVVDAR 392
>gi|254773505|ref|ZP_05215021.1| hypothetical protein MaviaA2_02340 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=233
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/233 (74%), Positives = 200/233 (86%), Gaps = 0/233 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE ND+LL AG GVGTH+ANQTAWTTL A+HHASGVASAINTAAT+ASWL
Sbjct 1 MADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GSAASA NVTMLNA+LHGLAGWVDVKPAVV+TAI+A++ A +MRPAPEC+ NR E
Sbjct 61 GAGSAASAANVTMLNASLHGLAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
D INP VL LTPRI SL++EY+G MWPNN+AVGA+YG VL ALAESLAI PP+A+MG
Sbjct 121 TDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYGAVLTALAESLAIAPPIASMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQ 233
ASPAAPA+A +A+G++AA AAGDGMR+AYQGVQ G+ GAGQ+ S+G++ G Q
Sbjct 181 ASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQ 233
>gi|333988695|ref|YP_004521309.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333484663|gb|AEF34055.1| PPE family protein [Mycobacterium sp. JDM601]
Length=397
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 224/400 (56%), Positives = 269/400 (68%), Gaps = 6/400 (1%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAAR PE ND L+ +G GV T LAN TAWTTLGA+HHASG+ASA+NTA T+ W+
Sbjct 1 MADPGWAARPPEVNDTLIKSGMGVATMLANGTAWTTLGAAHHASGIASAVNTALTSVGWI 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GSA+SALN T+LN LHGLAGWVD+K +V+ A+ A++ A +MR EC NR E
Sbjct 61 GAGSASSALNATLLNVALHGLAGWVDMKAPIVAAAVEAYQLAYGSMRTTQECEANRIETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
D INP VL L PRI SL+ EYFG+ WPNNAAVGA+YG L AL SL +P PVA MG
Sbjct 121 TDYGINPIVLGALWPRITSLEYEYFGMFWPNNAAVGASYGATLTALTSSLTVPAPVAGMG 180
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQP 240
ASPAAPA AA+AVG AAA+ AAG MR+AY G A S AGQ SA + G ++S+ + P
Sbjct 181 ASPAAPAAAASAVGDAAAQTAAGGAMRAAYTGTSAASNTAGQGASAAQGMGGEMSSLLGP 240
Query 241 MQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGI 300
+Q++ +QAP LMQ P S M P+QSM+GMF NP G A GA A A +
Sbjct 241 VQSI---GSSLMQAPQSLMQMPQSMMSPMQSMMGMFMNPSMFGGALNAAGAGGAPATAML 297
Query 301 SAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTT 360
+ A G G GG +GG G P ++FTRPVSAFESG GRPVGLRPSGALG+ + T
Sbjct 298 ANATATPGGGVGGGGVGGAGAPVSAFTRPVSAFESG-GGRPVGLRPSGALGSVESQQRVT 356
Query 361 TVGGTPIGGMPVGHAAGGHRGSHG--KSEQAATVRVVDDR 398
T G +GGMP+GHAAG S++A TVRVVDDR
Sbjct 357 TTSGAGMGGMPIGHAAGAAGRGQSGRSSDRANTVRVVDDR 396
>gi|336457764|gb|EGO36760.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=234
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 148/197 (76%), Positives = 171/197 (87%), Gaps = 0/197 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE ND+LL AG GVGTH+ANQTAWTTL A+HHASGVASAINTAAT+ASWL
Sbjct 1 MADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GSAASA NVTMLNA+LHGLAGWVDVKPAVV+TAI+A++ A +MRPAPEC+ NR E
Sbjct 61 GAGSAASAANVTMLNASLHGLAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
D INP VL LTPRI SL++EY+G MWPNN+AVGA+YG VL ALAESLAI PP+A+MG
Sbjct 121 TDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYGAVLTALAESLAIAPPIASMG 180
Query 181 ASPAAPAQAAAAVGQAA 197
ASPAAPA+A +A+G++A
Sbjct 181 ASPAAPAEAVSAIGESA 197
>gi|212596388|gb|ACJ35574.1| PPE2 [Mycobacterium intracellulare ATCC 13950]
Length=345
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/177 (71%), Positives = 141/177 (80%), Gaps = 0/177 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE NDLLL AG GV THLANQ AWT L A+HH S +AS INT AT+ASW
Sbjct 1 MADPGWAARTPEENDLLLKAGAGVVTHLANQAAWTALAATHHGSSIASTINTVATSASWT 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GS ASA N T LNA+LHGLAGWVDVKPAVVSTA++A++ A +MRPAPEC+ENR E
Sbjct 61 GAGSLASAANATALNASLHGLAGWVDVKPAVVSTAVSAYQMAYGSMRPAPECIENRTETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVA 177
D INP VL LTPRI SL++EYFG MWPNN+AVGA+YG +L AL+ SL IPPP+A
Sbjct 121 TDYGINPLVLGALTPRITSLELEYFGSMWPNNSAVGASYGSILTALSSSLTIPPPIA 177
>gi|254822562|ref|ZP_05227563.1| hypothetical protein MintA_21714 [Mycobacterium intracellulare
ATCC 13950]
Length=165
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/165 (71%), Positives = 131/165 (80%), Gaps = 0/165 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
M DPGWAARTPE NDLLL AG GV THLANQ AWT L A+HH S +AS INT AT+ASW
Sbjct 1 MADPGWAARTPEENDLLLKAGAGVVTHLANQAAWTALAATHHGSSIASTINTVATSASWT 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
G GS ASA N T LNA+LHGLAGWVDVKPAVVSTA++A++ A +MRPAPEC+ENR E
Sbjct 61 GAGSLASAANATALNASLHGLAGWVDVKPAVVSTAVSAYQMAYGSMRPAPECIENRTETA 120
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAA 165
D INP VL LTPRI SL++EYFG MWPNN+AVGA+YG +L A
Sbjct 121 TDYGINPLVLGALTPRITSLELEYFGSMWPNNSAVGASYGSILTA 165
>gi|289572149|ref|ZP_06452376.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289545904|gb|EFD49551.1| PPE family protein [Mycobacterium tuberculosis T17]
Length=99
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/99 (99%), Positives = 98/99 (99%), Gaps = 0/99 (0%)
Query 1 MPDPGWAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
MPDPGWAARTPEANDLLL AGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL
Sbjct 1 MPDPGWAARTPEANDLLLKAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAASWL 60
Query 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAF 99
GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAF
Sbjct 61 GVGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAF 99
>gi|254821252|ref|ZP_05226253.1| hypothetical protein MintA_15042 [Mycobacterium intracellulare
ATCC 13950]
Length=140
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/147 (66%), Positives = 108/147 (74%), Gaps = 9/147 (6%)
Query 252 LQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGAGG 311
+QAP MQAPM MQPL +GMFANPGA+GMGGA P SA SA G +SAA GA
Sbjct 2 MQAPMQAMQAPMQMMQPL---MGMFANPGAMGMGGATPAVSAVSATG-LSAAEAGGGASL 57
Query 312 GGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGADVVRAPTTTVGGTPIGGMP 371
G A + PA++FTRPVSAFE TSGRPVGLRP+GALGA+ +R TTT GG P+GGMP
Sbjct 58 GSAGV-----PASTFTRPVSAFEPATSGRPVGLRPAGALGAEAMRPQTTTTGGAPMGGMP 112
Query 372 VGHAAGGHRGSHGKSEQAATVRVVDDR 398
VGHAAGG RGS K+EQ ATVRVVD R
Sbjct 113 VGHAAGGDRGSRDKAEQPATVRVVDAR 139
>gi|336457765|gb|EGO36761.1| hypothetical protein MAPs_20052 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=163
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/165 (66%), Positives = 127/165 (77%), Gaps = 3/165 (1%)
Query 234 LSTFMQPMQAVMQAAPQALQAPSGLMQAPMSAMQPLQSMVGMFANPGALGMGGAAPGASA 293
+S+ MQP+Q +M A PQA+QAP +MQAPM MQPLQSM+GMFANPGA+GMGGAAPG SA
Sbjct 1 MSSLMQPVQELMGAVPQAMQAPMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSA 60
Query 294 ASAAGGISAAATEVGAGGGGAALGGGGMPATSFTRPVSAFESGTSGRPVGLRPSGALGAD 353
SA + + GG +LG G+PATSFTRPVSAFE TSGRPVGLRP+GALGA+
Sbjct 61 VSA---TTGLSAAEAGAGGAGSLGSAGVPATSFTRPVSAFEPATSGRPVGLRPAGALGAE 117
Query 354 VVRAPTTTVGGTPIGGMPVGHAAGGHRGSHGKSEQAATVRVVDDR 398
+R TTT+ G P+GGMPVGH AGG RGS K+E+ ATVRVVDDR
Sbjct 118 ALRPQTTTMSGAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDR 162
>gi|254773208|ref|ZP_05214724.1| hypothetical protein MaviaA2_00801 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=129
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/131 (68%), Positives = 101/131 (78%), Gaps = 3/131 (2%)
Query 268 PLQSMVGMFANPGALGMGGAAPGASAASAAGGISAAATEVGAGGGGAALGGGGMPATSFT 327
PLQSM+GMFANPGA+GMGGAAPG SA SA + + GG +LG G+PATSFT
Sbjct 1 PLQSMMGMFANPGAMGMGGAAPGVSAVSA---TTGLSAAEAGAGGAGSLGSAGVPATSFT 57
Query 328 RPVSAFESGTSGRPVGLRPSGALGADVVRAPTTTVGGTPIGGMPVGHAAGGHRGSHGKSE 387
RPVSAFE TSGRPVGLRP+GALGA+ +R TTT+ G P+GGMPVGH AGG RGS K+E
Sbjct 58 RPVSAFEPATSGRPVGLRPAGALGAEALRPQTTTMSGAPMGGMPVGHGAGGQRGSRDKAE 117
Query 388 QAATVRVVDDR 398
+ ATVRVVDDR
Sbjct 118 EPATVRVVDDR 128
>gi|333989613|ref|YP_004522227.1| hypothetical protein JDM601_0973 [Mycobacterium sp. JDM601]
gi|333485581|gb|AEF34973.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=218
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/203 (39%), Positives = 110/203 (55%), Gaps = 1/203 (0%)
Query 6 WAARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAATAAS-WLGVGS 64
W+A++PEAN +L +G G + +A+ A A +S N A T S W G G+
Sbjct 5 WSAQSPEANHTVLVSGPGSASTIAHAQALNAQAAQLQVLASSSKANAAGTYGSAWSGAGA 64
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNA 124
+S ++ +N L LA W+ + +V++A A+ A +AM P + NR + D
Sbjct 65 TSSQASLAGINTELLALAQWLQARAPMVTSAAQAYHRAVSAMVPTQQARANRVQEAADVE 124
Query 125 INPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPA 184
NP VL LTPRI L+++YFG MWP NA+ G+ YG L +LA PPP A SP
Sbjct 125 ANPRVLGALTPRITELNLDYFGQMWPTNASAGSGYGAALNTATAALAAPPPPANAAISPE 184
Query 185 APAQAAAAVGQAAAEAAAGDGMR 207
AP +AAAAV +A AAG MR
Sbjct 185 APVRAAAAVSEAVGRTAAGAAMR 207
>gi|296165453|ref|ZP_06847989.1| possible PPE protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899193|gb|EFG78663.1| possible PPE protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=370
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/288 (29%), Positives = 116/288 (41%), Gaps = 37/288 (12%)
Query 7 AARTPEANDLLLTAGTGVGTHLANQTA-WTTLGASHHASGVASAINTAATA-ASWLGVGS 64
AA PE N L+ AG +G L A + ++ A A + T+ TA W G G
Sbjct 8 AAVAPEINHTLMIAGD-LGASLVEAAAGYESVADMLIAELTAMGLTTSTTAMVGWQGPGG 66
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENR-------- 116
++ A + W+ + + AA A M PA C+ NR
Sbjct 67 EMMEMSAAEFMAVCAAASAWIRIGQIQAAEVAAAHTAAVENMIPAQVCLTNRTTQAGLVG 126
Query 117 DEWGVDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPV 176
W N TP I++LD +Y+G W NA YG +++ +++ P P+
Sbjct 127 TNWFGQN----------TPGIIALDAQYYGHFWVTNALNRTYYGATVSSALAAISEPNPL 176
Query 177 ATMGASPAAPA-----QAAAAVGQAAAEAAAGDGMRSAYQ-GVQAGSTGAGQSTSAGENF 230
+ A+P PA A GQ A +A+A +A Q Q S ++ AG F
Sbjct 177 SPTAANPLGPALGVAQDAGQTGGQTAFQASAKTMTTAADQTSQQPTSIMTSMASQAGGLF 236
Query 231 GNQLSTFMQPMQAVMQAAPQALQAPSGLMQAP--MSAMQ-PLQSMVGM 275
G STF Q A Q PS L QAP S M PL SM G+
Sbjct 237 GQVGSTFGQFTSA-------GQQLPSMLGQAPQMFSGMLGPLSSMNGL 277
>gi|240170154|ref|ZP_04748813.1| hypothetical protein MkanA1_12628 [Mycobacterium kansasii ATCC
12478]
Length=157
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/108 (45%), Positives = 63/108 (59%), Gaps = 1/108 (0%)
Query 104 AAMRPAPECMENRDEWGVDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVL 163
A+M A + + NR + +NP V LTP+IV+L++EY+G MWP NAA GA YG L
Sbjct 2 ASMVTAQQAVANRRDEATAQQLNPLVWGALTPQIVALNLEYYGQMWPRNAAAGAAYGAAL 61
Query 164 AALAESLAIPPPVATMGASPAAPAQAAAAVG-QAAAEAAAGDGMRSAY 210
A A +L +P P A G SPAA A A G +AAEA R+A+
Sbjct 62 RAAAAALMVPFPPAVAGGSPAAAAVGLAETGADSAAEATLQASERAAH 109
>gi|118616708|ref|YP_905040.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118568818|gb|ABL03569.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=393
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/210 (33%), Positives = 94/210 (45%), Gaps = 15/210 (7%)
Query 11 PEANDLLLTAGTGVGTHLANQTAWTTLGASHH--ASGVASAINTAATAASWLGVGS---- 64
PE N + AG G G+ L AW ++ + AS S I A W+G +
Sbjct 8 PEFNSGKMYAGAGSGSILVAAEAWDSVAVDLYSAASSCQSVIWGLAFG-QWVGASASLMG 66
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNA 124
AA+A V L AT A ++ A A+E+A AA P +ENR + +
Sbjct 67 AAAAPYVAWLGAT----ATQAELAANQARGAAVAYESAFAATVPPALILENRLQ--LVTL 120
Query 125 INPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPA 184
I ++ TP I + + EY G MW +AA Y G A LAE+L P A A+
Sbjct 121 IATNIFGQNTPAIATTEAEY-GEMWAQDAAAMYGYAGSAAMLAETL-TPFEEAPEVANAG 178
Query 185 APAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+ AAVGQA AAAG M + Q +Q
Sbjct 179 GLVKQTAAVGQAIDSAAAGQLMSNVPQALQ 208
>gi|183984212|ref|YP_001852503.1| PPE family protein, PPE18 [Mycobacterium marinum M]
gi|183177538|gb|ACC42648.1| PPE family protein, PPE18 [Mycobacterium marinum M]
Length=393
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/210 (33%), Positives = 93/210 (45%), Gaps = 15/210 (7%)
Query 11 PEANDLLLTAGTGVGTHLANQTAWTTLGASHH--ASGVASAINTAATAASWLGVGS---- 64
PE N + AG G G+ L AW ++ + AS S I A W+G +
Sbjct 8 PEINSAKMYAGAGSGSILVAAEAWDSVAVDLYSAASSCQSVIWGLAFG-QWVGASASLMG 66
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNA 124
AA+A V L AT A ++ A A+E+A AA P +ENR + +
Sbjct 67 AAAAPYVAWLGAT----ATRAELAANQARGAAVAYESAFAATVPPALILENRLQ--LVTL 120
Query 125 INPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPA 184
I ++ TP I + + EY G MW +AA Y G A LAE+L P A A+
Sbjct 121 IATNIFGQNTPAIATTEAEY-GEMWAQDAAAMYGYAGSAAMLAETL-TPFEEAPEVANAG 178
Query 185 APAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
AAVGQA AAAG M + Q +Q
Sbjct 179 GLVNQTAAVGQAIDSAAAGQLMSNVPQALQ 208
>gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=406
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 78/274 (29%), Positives = 113/274 (42%), Gaps = 33/274 (12%)
Query 11 PEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGV-ASAINTAATAASWLGVGSAASAL 69
PE N + G G A +AW L A +++ + + TA + WLG SA+ A
Sbjct 9 PEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLGPASASMAQ 68
Query 70 NVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINPSV 129
V A + A + + A A+ETA AA P P NR + A N V
Sbjct 69 AVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQLLATN--V 126
Query 130 LWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPAQA 189
L TP I L+ +Y G MW +A+ +Y G AA A+ AP A
Sbjct 127 LGLNTPAIAQLEAQY-GEMWAQDASTMYSYAGQSAA---------------ATKVAPFTA 170
Query 190 AAAVGQAAAEAAAGDGMRSAYQGVQAGSTGAGQSTSAGENFGNQLSTFMQPMQAVMQAAP 249
A + +A+A G + A +TG ++S + +S+ +QA+ AAP
Sbjct 171 APQIANPSAQATQGTAV--------ANATGNSAASSTQSVLSHAVSSTPNTLQAL--AAP 220
Query 250 QALQAPSGLMQAPMSAMQPLQSMVGMFANPGALG 283
A Q S AP S + L + G P +LG
Sbjct 221 AATQ--SSTTSAPFSEIWYL--LTGQTTLPTSLG 250
>gi|289446957|ref|ZP_06436701.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289419915|gb|EFD17116.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=396
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 64/210 (31%), Positives = 92/210 (44%), Gaps = 9/210 (4%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLGVGS 64
A PE N + AG G + +A W ++ + ++ ASA + T SW+G +
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 63
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNA 124
A + A + AG ++ A V A AA+ETA P P ENR E + A
Sbjct 64 GLMAAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYRLTVPPPVIAENRAELMILIA 123
Query 125 INPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPA 184
N +L TP I + EY G MW +AA Y A E+L +P A + +P
Sbjct 124 TN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLITNPG 179
Query 185 APAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+ A AV +A AAA M + Q +Q
Sbjct 180 GLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|340626377|ref|YP_004744829.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004567|emb|CCC43711.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=396
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 64/210 (31%), Positives = 92/210 (44%), Gaps = 9/210 (4%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLGVGS 64
A PE N + AG G + +A W ++ + ++ ASA + T SW+G +
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAQMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 63
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNA 124
A + A + AG + A V A AA+ETA+ P P ENR E + A
Sbjct 64 GLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAHGLTVPPPVIAENRAELMILIA 123
Query 125 INPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPA 184
N +L TP I + EY G MW +AA Y A E+L +P A + +P
Sbjct 124 TN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLITNPG 179
Query 185 APAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+ A AV +A AAA M + Q +Q
Sbjct 180 GLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|339294339|gb|AEJ46450.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=396
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/210 (31%), Positives = 91/210 (44%), Gaps = 9/210 (4%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLGVGS 64
A PE N + AG G + +A W ++ + ++ ASA + T SW+G +
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 63
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNA 124
A + A + AG + A V A AA+ETA P P ENR E + A
Sbjct 64 GLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIA 123
Query 125 INPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPA 184
N +L TP I + EY G MW +AA Y A E+L +P A + +P
Sbjct 124 TN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLITNPG 179
Query 185 APAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+ A AV +A AAA M + Q +Q
Sbjct 180 GLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|294993380|ref|ZP_06799071.1| PPE family protein [Mycobacterium tuberculosis 210]
Length=390
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAQMWDSVASDLFSA--ASAFQSVVWGLTVGSWIGSSA 63
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 64 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 119
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 120 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 175
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 176 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|253799589|ref|YP_003032590.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297730905|ref|ZP_06960023.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313658238|ref|ZP_07815118.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|253321092|gb|ACT25695.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
Length=396
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 63
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 64 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 119
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 120 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 175
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 176 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|57116852|ref|YP_177801.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661151|ref|YP_001282674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148822583|ref|YP_001287337.1| PPE family protein [Mycobacterium tuberculosis F11]
21 more sequence titles
Length=396
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 63
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 64 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 119
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 120 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 175
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 176 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308215968|gb|EFO75367.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=395
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 5 ALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 62
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 63 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 118
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 119 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 174
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 175 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 208
>gi|121637292|ref|YP_977515.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989766|ref|YP_002644453.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121492939|emb|CAL71410.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224772879|dbj|BAH25685.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601310|emb|CCC63983.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=396
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAQMWDSVASDLFSA--ASAFQSVVWGLTVGSWIGSSA 63
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 64 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 119
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 120 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 175
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 176 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|306784092|ref|ZP_07422414.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306788459|ref|ZP_07426781.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|306792785|ref|ZP_07431087.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|306797185|ref|ZP_07435487.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308331160|gb|EFP20011.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308334942|gb|EFP23793.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308338747|gb|EFP27598.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308342446|gb|EFP31297.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
Length=396
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 63
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 64 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 119
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 120 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 175
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 176 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|289554847|ref|ZP_06444057.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|289439479|gb|EFD21972.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length=395
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 5 ALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 62
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 63 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 118
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 119 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 174
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 175 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 208
>gi|289574028|ref|ZP_06454255.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289753443|ref|ZP_06512821.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|339631430|ref|YP_004723072.1| PPE family protein [Mycobacterium africanum GM041182]
gi|289538459|gb|EFD43037.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289694030|gb|EFD61459.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|339330786|emb|CCC26457.1| PPE family protein [Mycobacterium africanum GM041182]
Length=396
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 66/214 (31%), Positives = 96/214 (45%), Gaps = 17/214 (7%)
Query 8 ARTPEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG--- 61
A PE N + AG G + +A W ++ + ++ ASA + T SW+G
Sbjct 6 ALPPEINSARMYAGPGSASLVAAAQMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSA 63
Query 62 -VGSAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWG 120
+ AA++ V ++ T AG ++ A V A AA+ETA P P ENR E
Sbjct 64 GLMVAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELM 119
Query 121 VDNAINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMG 180
+ A N +L TP I + EY G MW +AA Y A E+L +P A +
Sbjct 120 ILIATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLI 175
Query 181 ASPAAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+P + A AV +A AAA M + Q +Q
Sbjct 176 TNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
>gi|308376701|ref|ZP_07439733.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308350282|gb|EFP39133.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
Length=405
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 65/211 (31%), Positives = 95/211 (46%), Gaps = 17/211 (8%)
Query 11 PEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLGVGS--- 64
PE N + AG G + +A W ++ + ++ ASA + T SW+G +
Sbjct 18 PEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSAGLM 75
Query 65 -AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDN 123
AA++ V ++ T AG ++ A V A AA+ETA P P ENR E +
Sbjct 76 VAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILI 131
Query 124 AINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASP 183
A N +L TP I + EY G MW +AA Y A E+L +P A + +P
Sbjct 132 ATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLITNP 187
Query 184 AAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+ A AV +A AAA M + Q +Q
Sbjct 188 GGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 218
>gi|333991172|ref|YP_004523786.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
gi|333487140|gb|AEF36532.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
Length=386
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/60 (42%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query 6 WAARTPEANDLLLTAGTGVGTHLANQTAWTTLGAS-HHASGVASAINTAATAASWLGVGS 64
+AA PE N + AG G G+ +A AWT L A H A+ A+ T T+ +WLGV S
Sbjct 3 FAALPPEVNSGRMYAGPGSGSLVAASAAWTELAAELHTAAASYRAVVTELTSGAWLGVSS 62
>gi|306783914|ref|ZP_07422236.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306797010|ref|ZP_07435312.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308331352|gb|EFP20203.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308342642|gb|EFP31493.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
Length=391
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 61/207 (30%), Positives = 88/207 (43%), Gaps = 9/207 (4%)
Query 11 PEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLGVGSAAS 67
PE N + AG G + +A W ++ + ++ ASA + T SW+G +
Sbjct 9 PEINSARMYAGPGSASLVAAAQMWDSVASDLFSA--ASAFQSVVWGLTVGSWIGSSAGLM 66
Query 68 ALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNAINP 127
+ A + AG ++ A V A AA+ETA P P ENR E + A N
Sbjct 67 VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILTATN- 125
Query 128 SVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASPAAPA 187
+L TP I + EY G MW +A Y A +L +P A S
Sbjct 126 -LLGQNTPAIAVNEAEY-GEMWAQDAEAMFGYAAATATATATL-LPFEEAPEMTSAGGLL 182
Query 188 QAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+ AAAV +A+ AAA M + Q +Q
Sbjct 183 EQAAAVEEASDTAAANQLMNNVPQALQ 209
>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 59/172 (35%), Positives = 73/172 (43%), Gaps = 16/172 (9%)
Query 11 PEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVAS--AINTAATAASWLGVGS---- 64
PE N + AG G G+ LA TAW L A+ S AS ++ T SW G S
Sbjct 8 PEINSARIYAGAGPGSLLAAATAWQEL-ATELNSAAASYGSVIAGLTTGSWAGPSSVAMA 66
Query 65 AASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDNA 124
AA+ +T LNAT A VS A+AA+ETA AA P P NR A
Sbjct 67 AAAGPYITWLNAT----GAQAQQAAAQVSAAVAAYETAFAATVPPPLITANRSLQATLTA 122
Query 125 INPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGG--VLAALAESLAIPP 174
N +L T I + + +Y MW + A Y G LA PP
Sbjct 123 TN--ILGQNTAAIATTEADYL-EMWAQDTAAMYGYAGASALATRVSPFTSPP 171
>gi|344221312|gb|AEN01943.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=394
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 65/211 (31%), Positives = 95/211 (46%), Gaps = 17/211 (8%)
Query 11 PEANDLLLTAGTGVGTHLANQTAWTTLGASHHASGVASAINTAA---TAASWLG----VG 63
PE N + AG G + +A W ++ + ++ ASA + T SW+G +
Sbjct 9 PEINSARMYAGPGSASLVAAAKMWDSVASDLFSA--ASAFQSVVWGLTTGSWIGSSAGLM 66
Query 64 SAASALNVTMLNATLHGLAGWVDVKPAVVSTAIAAFETANAAMRPAPECMENRDEWGVDN 123
AA++ V ++ T AG ++ A V A AA+ETA P P ENR E +
Sbjct 67 VAAASPYVAWMSVT----AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILI 122
Query 124 AINPSVLWTLTPRIVSLDVEYFGVMWPNNAAVGATYGGVLAALAESLAIPPPVATMGASP 183
A N +L TP I + EY G MW +AA Y A E+L +P A + +P
Sbjct 123 ATN--LLGQNTPAIAVNEAEY-GEMWAQDAAAMFGYAATAATATEAL-LPFEDAPLITNP 178
Query 184 AAPAQAAAAVGQAAAEAAAGDGMRSAYQGVQ 214
+ A AV +A AAA M + Q +Q
Sbjct 179 GGLLEQAVAVEEAIDTAAANQLMNNVPQALQ 209
Lambda K H
0.312 0.126 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 785717421624
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40