BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3897c

Length=210
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15611033|ref|NP_218414.1|  hypothetical protein Rv3897c [Mycob...   401    3e-110
gi|326905731|gb|EGE52664.1|  hypothetical protein TBPG_03696 [Myc...   311    5e-83 
gi|289760070|ref|ZP_06519448.1|  conserved hypothetical protein [...   310    6e-83 
gi|31795071|ref|NP_857564.1|  hypothetical protein Mb3927c [Mycob...   310    8e-83 
gi|289747742|ref|ZP_06507120.1|  conserved hypothetical protein [...   310    9e-83 
gi|289756032|ref|ZP_06515410.1|  conserved hypothetical protein [...   310    1e-82 
gi|289441339|ref|ZP_06431083.1|  conserved hypothetical protein [...   309    1e-82 
gi|15843528|ref|NP_338565.1|  hypothetical protein MT4013 [Mycoba...   308    4e-82 
gi|289572154|ref|ZP_06452381.1|  conserved hypothetical protein [...   308    5e-82 
gi|340628869|ref|YP_004747321.1|  hypothetical protein MCAN_39191...   187    1e-45 
gi|298527370|ref|ZP_07014779.1|  conserved hypothetical protein [...   134    9e-30 
gi|289447704|ref|ZP_06437448.1|  conserved hypothetical protein [...   127    9e-28 
gi|340627095|ref|YP_004745547.1|  hypothetical protein MCAN_21081...   125    5e-27 
gi|31793266|ref|NP_855759.1|  hypothetical protein Mb2109 [Mycoba...   125    5e-27 
gi|298525583|ref|ZP_07012992.1|  conserved hypothetical protein [...   125    5e-27 
gi|15841576|ref|NP_336613.1|  hypothetical protein MT2145 [Mycoba...   125    5e-27 
gi|15609220|ref|NP_216599.1|  hypothetical protein Rv2083 [Mycoba...   124    1e-26 
gi|183983066|ref|YP_001851357.1|  hypothetical protein MMAR_3067 ...   120    1e-25 
gi|289748435|ref|ZP_06507813.1|  conserved hypothetical protein [...   115    3e-24 
gi|336459791|gb|EGO38705.1|  hypothetical protein MAPs_46820 [Myc...   115    4e-24 
gi|41410423|ref|NP_963259.1|  hypothetical protein MAP4325c [Myco...   115    4e-24 
gi|118617824|ref|YP_906156.1|  hypothetical protein MUL_2312 [Myc...   105    3e-21 
gi|240168378|ref|ZP_04747037.1|  hypothetical protein MkanA1_0364...   101    6e-20 
gi|342862327|ref|ZP_08718968.1|  hypothetical protein MCOL_25673 ...  99.4    3e-19 
gi|254777635|ref|ZP_05219151.1|  hypothetical protein MaviaA2_236...  89.7    2e-16 
gi|306780111|ref|ZP_07418448.1|  hypothetical protein TMBG_00631 ...  89.4    3e-16 
gi|323719381|gb|EGB28520.1|  hypothetical protein TMMG_01360 [Myc...  88.6    6e-16 
gi|308376907|ref|ZP_07668376.1|  hypothetical protein TMHG_01272 ...  88.6    6e-16 
gi|254232248|ref|ZP_04925575.1|  conserved hypothetical protein [...  87.4    1e-15 
gi|254819418|ref|ZP_05224419.1|  hypothetical protein MintA_05814...  78.6    6e-13 
gi|289748434|ref|ZP_06507812.1|  conserved hypothetical protein [...  72.4    3e-11 
gi|296167168|ref|ZP_06849575.1|  conserved hypothetical protein [...  64.3    1e-08 
gi|289762245|ref|ZP_06521623.1|  conserved hypothetical protein [...  59.3    4e-07 
gi|333988703|ref|YP_004521317.1|  hypothetical protein JDM601_006...  56.2    3e-06 
gi|254777634|ref|ZP_05219150.1|  hypothetical protein MaviaA2_235...  47.4    0.001 


>gi|15611033|ref|NP_218414.1| hypothetical protein Rv3897c [Mycobacterium tuberculosis H37Rv]
 gi|148663764|ref|YP_001285287.1| hypothetical protein MRA_3936 [Mycobacterium tuberculosis H37Ra]
 gi|2072691|emb|CAB08104.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507916|gb|ABQ75725.1| hypothetical protein MRA_3936 [Mycobacterium tuberculosis H37Ra]
Length=210

 Score =  401 bits (1031),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 210/210 (100%), Positives = 210/210 (100%), Gaps = 0/210 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCAEWSTGQGPLNST  180
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCAEWSTGQGPLNST
Sbjct  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCAEWSTGQGPLNST  180

Query  181  AECSGEICRRQAGGHQVDATDPCCAERRQG  210
            AECSGEICRRQAGGHQVDATDPCCAERRQG
Sbjct  181  AECSGEICRRQAGGHQVDATDPCCAERRQG  210


>gi|326905731|gb|EGE52664.1| hypothetical protein TBPG_03696 [Mycobacterium tuberculosis W-148]
Length=350

 Score =  311 bits (796),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 166/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  137  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  196

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  197  ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  256

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  257  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  304


>gi|289760070|ref|ZP_06519448.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289715634|gb|EFD79646.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=305

 Score =  310 bits (795),  Expect = 6e-83, Method: Compositional matrix adjust.
 Identities = 166/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  92   MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  151

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  152  ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  211

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  212  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  259


>gi|31795071|ref|NP_857564.1| hypothetical protein Mb3927c [Mycobacterium bovis AF2122/97]
 gi|121639809|ref|YP_980033.1| hypothetical protein BCG_3954c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224992304|ref|YP_002646994.1| hypothetical protein JTY_3956 [Mycobacterium bovis BCG str. Tokyo 
172]
 8 more sequence titles
 gi|289445498|ref|ZP_06435242.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289572550|ref|ZP_06452777.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|31620669|emb|CAD96113.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121495457|emb|CAL73944.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224775420|dbj|BAH28226.1| hypothetical protein JTY_3956 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289418456|gb|EFD15657.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289536981|gb|EFD41559.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|341603830|emb|CCC66511.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=329

 Score =  310 bits (794),  Expect = 8e-83, Method: Compositional matrix adjust.
 Identities = 166/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  116  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  175

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  176  ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  235

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  236  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  283


>gi|289747742|ref|ZP_06507120.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289688270|gb|EFD55758.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|339296704|gb|AEJ48815.1| hypothetical protein CCDC5079_3626 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339300296|gb|AEJ52406.1| hypothetical protein CCDC5180_3569 [Mycobacterium tuberculosis 
CCDC5180]
Length=331

 Score =  310 bits (794),  Expect = 9e-83, Method: Compositional matrix adjust.
 Identities = 166/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  118  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  177

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  178  ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  237

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  238  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  285


>gi|289756032|ref|ZP_06515410.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289696619|gb|EFD64048.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=305

 Score =  310 bits (793),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 165/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  92   MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  151

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDS+EGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  152  ARLVDSVEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  211

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  212  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  259


>gi|289441339|ref|ZP_06431083.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289414258|gb|EFD11498.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=329

 Score =  309 bits (792),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 165/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  116  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  175

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDS+EGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  176  ARLVDSVEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  235

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  236  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  283


>gi|15843528|ref|NP_338565.1| hypothetical protein MT4013 [Mycobacterium tuberculosis CDC1551]
 gi|148825105|ref|YP_001289859.1| hypothetical protein TBFG_13932 [Mycobacterium tuberculosis F11]
 gi|253800947|ref|YP_003033949.1| hypothetical protein TBMG_03945 [Mycobacterium tuberculosis KZN 
1435]
 28 more sequence titles
 gi|254233383|ref|ZP_04926709.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254366436|ref|ZP_04982480.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289556166|ref|ZP_06445376.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289764090|ref|ZP_06523468.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|308369271|ref|ZP_07417129.2| hypothetical protein TMBG_02438 [Mycobacterium tuberculosis SUMu002]
 gi|308372778|ref|ZP_07429804.2| hypothetical protein TMEG_00398 [Mycobacterium tuberculosis SUMu005]
 gi|308375027|ref|ZP_07442419.2| hypothetical protein TMGG_01444 [Mycobacterium tuberculosis SUMu007]
 gi|308376271|ref|ZP_07438210.2| hypothetical protein TMHG_02969 [Mycobacterium tuberculosis SUMu008]
 gi|308378509|ref|ZP_07482809.2| hypothetical protein TMIG_00254 [Mycobacterium tuberculosis SUMu009]
 gi|308380854|ref|ZP_07491258.2| hypothetical protein TMKG_01149 [Mycobacterium tuberculosis SUMu011]
 gi|339633887|ref|YP_004725529.1| hypothetical protein MAF_39120 [Mycobacterium africanum GM041182]
 gi|13883904|gb|AAK48379.1| hypothetical protein MT4013 [Mycobacterium tuberculosis CDC1551]
 gi|124603176|gb|EAY61451.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151948|gb|EBA43993.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148723632|gb|ABR08257.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253322451|gb|ACT27054.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289440798|gb|EFD23291.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289711596|gb|EFD75612.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|308328129|gb|EFP16980.1| hypothetical protein TMBG_02438 [Mycobacterium tuberculosis SUMu002]
 gi|308339854|gb|EFP28705.1| hypothetical protein TMEG_00398 [Mycobacterium tuberculosis SUMu005]
 gi|308347649|gb|EFP36500.1| hypothetical protein TMGG_01444 [Mycobacterium tuberculosis SUMu007]
 gi|308351675|gb|EFP40526.1| hypothetical protein TMHG_02969 [Mycobacterium tuberculosis SUMu008]
 gi|308352274|gb|EFP41125.1| hypothetical protein TMIG_00254 [Mycobacterium tuberculosis SUMu009]
 gi|308360268|gb|EFP49119.1| hypothetical protein TMKG_01149 [Mycobacterium tuberculosis SUMu011]
 gi|323717313|gb|EGB26518.1| hypothetical protein TMMG_00393 [Mycobacterium tuberculosis CDC1551A]
 gi|328460675|gb|AEB06098.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339333243|emb|CCC28980.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|344221737|gb|AEN02368.1| hypothetical protein MTCTRI2_3976 [Mycobacterium tuberculosis 
CTRI-2]
Length=214

 Score =  308 bits (789),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 166/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  168


>gi|289572154|ref|ZP_06452381.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289545909|gb|EFD49556.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=329

 Score =  308 bits (788),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 165/168 (99%), Positives = 166/168 (99%), Gaps = 0/168 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  118  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  177

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDS+EGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  178  ARLVDSVEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  237

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  238  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  285


>gi|340628869|ref|YP_004747321.1| hypothetical protein MCAN_39191 [Mycobacterium canettii CIPT 
140010059]
 gi|340007059|emb|CCC46250.1| putative uncharacterized protein bcg_3954c [Mycobacterium canettii 
CIPT 140010059]
Length=329

 Score =  187 bits (474),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 160/165 (97%), Positives = 161/165 (98%), Gaps = 0/165 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLD ADG
Sbjct  116  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDFADG  175

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  176  ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  235

Query  121  PDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  165
            P PVSGTPRASGPAGMTGMPMVPPG +GAGAEGA KDKPVEKRVT
Sbjct  236  PAPVSGTPRASGPAGMTGMPMVPPGTVGAGAEGAIKDKPVEKRVT  280


>gi|298527370|ref|ZP_07014779.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497164|gb|EFI32458.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=280

 Score =  134 bits (337),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  116  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  175

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  120
            ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT
Sbjct  176  ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVT  235

Query  121  PDPVSGTPRA  130
            PDPVSGTPRA
Sbjct  236  PDPVSGTPRA  245


>gi|289447704|ref|ZP_06437448.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420662|gb|EFD17863.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=1033

 Score =  127 bits (319),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 119/167 (72%), Positives = 127/167 (77%), Gaps = 1/167 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  814  MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  873

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTP  121
            RL+DSI GEPGLG     G    GGG GGTTPTGYLGPPPVPTSSPPTTPAGAP KS T 
Sbjct  874  RLLDSIGGEPGLGSG-AGGGDVGGGGAGGTTPTGYLGPPPVPTSSPPTTPAGAPTKSATM  932

Query  122  DPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
             P  G   AS   G  GMPMVPPGA+GA  EG+ ++KPVEKRVT  A
Sbjct  933  PPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRVTAPA  979


>gi|340627095|ref|YP_004745547.1| hypothetical protein MCAN_21081 [Mycobacterium canettii CIPT 
140010059]
 gi|340005285|emb|CCC44440.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=314

 Score =  125 bits (313),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 119/167 (72%), Positives = 127/167 (77%), Gaps = 1/167 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTP  121
            RL+DSI GEPGLG     G    GGG GGTTPTGYLGPPPVPTSSPPTTPAGAP KS T 
Sbjct  155  RLLDSIGGEPGLGSG-AGGGDVGGGGAGGTTPTGYLGPPPVPTSSPPTTPAGAPTKSATM  213

Query  122  DPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
             P  G   AS   G  GMPMVPPGA+GA  EG+ ++KPVEKRVT  A
Sbjct  214  PPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRVTAPA  260


>gi|31793266|ref|NP_855759.1| hypothetical protein Mb2109 [Mycobacterium bovis AF2122/97]
 gi|121637968|ref|YP_978192.1| hypothetical protein BCG_2102 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990462|ref|YP_002645149.1| hypothetical protein JTY_2096 [Mycobacterium bovis BCG str. Tokyo 
172]
 16 more sequence titles
 gi|289443589|ref|ZP_06433333.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289570196|ref|ZP_06450423.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574764|ref|ZP_06454991.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289750679|ref|ZP_06510057.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754194|ref|ZP_06513572.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|339632119|ref|YP_004723761.1| hypothetical protein MAF_20970 [Mycobacterium africanum GM041182]
 gi|31618858|emb|CAD96962.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493616|emb|CAL72090.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773575|dbj|BAH26381.1| hypothetical protein JTY_2096 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289416508|gb|EFD13748.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289539195|gb|EFD43773.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543950|gb|EFD47598.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289691266|gb|EFD58695.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694781|gb|EFD62210.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|339331475|emb|CCC27167.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341602006|emb|CCC64680.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=314

 Score =  125 bits (313),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 119/167 (72%), Positives = 127/167 (77%), Gaps = 1/167 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTP  121
            RL+DSI GEPGLG     G    GGG GGTTPTGYLGPPPVPTSSPPTTPAGAP KS T 
Sbjct  155  RLLDSIGGEPGLGSG-AGGGDVGGGGAGGTTPTGYLGPPPVPTSSPPTTPAGAPTKSATM  213

Query  122  DPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
             P  G   AS   G  GMPMVPPGA+GA  EG+ ++KPVEKRVT  A
Sbjct  214  PPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRVTAPA  260


>gi|298525583|ref|ZP_07012992.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298495377|gb|EFI30671.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=314

 Score =  125 bits (313),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 118/167 (71%), Positives = 126/167 (76%), Gaps = 1/167 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTP  121
            RL+DSI GEPGLG     G    GGG GGTTPTGYLGP PVPTSSPPTTPAGAP KS T 
Sbjct  155  RLLDSIGGEPGLGSG-AGGGDVGGGGAGGTTPTGYLGPSPVPTSSPPTTPAGAPTKSATM  213

Query  122  DPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
             P  G   AS   G  GMPMVPPGA+GA  EG+ ++KPVEKRVT  A
Sbjct  214  PPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRVTAPA  260


>gi|15841576|ref|NP_336613.1| hypothetical protein MT2145 [Mycobacterium tuberculosis CDC1551]
 gi|148823299|ref|YP_001288053.1| hypothetical protein TBFG_12120 [Mycobacterium tuberculosis F11]
 gi|253798858|ref|YP_003031859.1| hypothetical protein TBMG_01898 [Mycobacterium tuberculosis KZN 
1435]
 35 more sequence titles
 gi|254364896|ref|ZP_04980942.1| hypothetical protein TBHG_02041 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254551116|ref|ZP_05141563.1| hypothetical protein Mtube_11741 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289554132|ref|ZP_06443342.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289745360|ref|ZP_06504738.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289758202|ref|ZP_06517580.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294997027|ref|ZP_06802718.1| hypothetical protein Mtub2_21613 [Mycobacterium tuberculosis 
210]
 gi|297634664|ref|ZP_06952444.1| hypothetical protein MtubK4_11106 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731652|ref|ZP_06960770.1| hypothetical protein MtubKR_11211 [Mycobacterium tuberculosis 
KZN R506]
 gi|306776324|ref|ZP_07414661.1| hypothetical protein TMAG_02267 [Mycobacterium tuberculosis SUMu001]
 gi|306784857|ref|ZP_07423179.1| hypothetical protein TMCG_00180 [Mycobacterium tuberculosis SUMu003]
 gi|306789222|ref|ZP_07427544.1| hypothetical protein TMDG_00563 [Mycobacterium tuberculosis SUMu004]
 gi|306793553|ref|ZP_07431855.1| hypothetical protein TMEG_02450 [Mycobacterium tuberculosis SUMu005]
 gi|306808391|ref|ZP_07445059.1| hypothetical protein TMGG_00640 [Mycobacterium tuberculosis SUMu007]
 gi|306968214|ref|ZP_07480875.1| hypothetical protein TMIG_00750 [Mycobacterium tuberculosis SUMu009]
 gi|307080148|ref|ZP_07489318.1| hypothetical protein TMKG_00343 [Mycobacterium tuberculosis SUMu011]
 gi|313658987|ref|ZP_07815867.1| hypothetical protein MtubKV_11226 [Mycobacterium tuberculosis 
KZN V2475]
 gi|13881824|gb|AAK46427.1| hypothetical protein MT2145 [Mycobacterium tuberculosis CDC1551]
 gi|134150410|gb|EBA42455.1| hypothetical protein TBHG_02041 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148721826|gb|ABR06451.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253320361|gb|ACT24964.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289438764|gb|EFD21257.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289685888|gb|EFD53376.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289713766|gb|EFD77778.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308215277|gb|EFO74676.1| hypothetical protein TMAG_02267 [Mycobacterium tuberculosis SUMu001]
 gi|308330450|gb|EFP19301.1| hypothetical protein TMCG_00180 [Mycobacterium tuberculosis SUMu003]
 gi|308334282|gb|EFP23133.1| hypothetical protein TMDG_00563 [Mycobacterium tuberculosis SUMu004]
 gi|308338084|gb|EFP26935.1| hypothetical protein TMEG_02450 [Mycobacterium tuberculosis SUMu005]
 gi|308345262|gb|EFP34113.1| hypothetical protein TMGG_00640 [Mycobacterium tuberculosis SUMu007]
 gi|308354193|gb|EFP43044.1| hypothetical protein TMIG_00750 [Mycobacterium tuberculosis SUMu009]
 gi|308362071|gb|EFP50922.1| hypothetical protein TMKG_00343 [Mycobacterium tuberculosis SUMu011]
 gi|326903698|gb|EGE50631.1| hypothetical protein TBPG_01578 [Mycobacterium tuberculosis W-148]
 gi|328458616|gb|AEB04039.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339295005|gb|AEJ47116.1| hypothetical protein CCDC5079_1926 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298630|gb|AEJ50740.1| hypothetical protein CCDC5180_1903 [Mycobacterium tuberculosis 
CCDC5180]
 gi|344219910|gb|AEN00541.1| hypothetical protein MTCTRI2_2122 [Mycobacterium tuberculosis 
CTRI-2]
Length=314

 Score =  125 bits (313),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 119/167 (72%), Positives = 127/167 (77%), Gaps = 1/167 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTP  121
            RL+DSI GEPGLG     G    GGG GGTTPTGYLGPPPVPTSSPPTTPAGAP KS T 
Sbjct  155  RLLDSIGGEPGLGSG-AGGGDVGGGGAGGTTPTGYLGPPPVPTSSPPTTPAGAPTKSATM  213

Query  122  DPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
             P  G   AS   G  GMPMVPPGA+GA  EG+ ++KPVEKRVT  A
Sbjct  214  PPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRVTAPA  260


>gi|15609220|ref|NP_216599.1| hypothetical protein Rv2083 [Mycobacterium tuberculosis H37Rv]
 gi|148661899|ref|YP_001283422.1| hypothetical protein MRA_2099 [Mycobacterium tuberculosis H37Ra]
 gi|167966798|ref|ZP_02549075.1| hypothetical protein MtubH3_01505 [Mycobacterium tuberculosis 
H37Ra]
 gi|307084728|ref|ZP_07493841.1| hypothetical protein TMLG_03576 [Mycobacterium tuberculosis SUMu012]
 gi|1731339|sp|Q10691.1|Y2083_MYCTU RecName: Full=Uncharacterized protein Rv2083/MT2145
 gi|1370249|emb|CAA98195.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148506051|gb|ABQ73860.1| hypothetical protein MRA_2099 [Mycobacterium tuberculosis H37Ra]
 gi|308365710|gb|EFP54561.1| hypothetical protein TMLG_03576 [Mycobacterium tuberculosis SUMu012]
Length=314

 Score =  124 bits (310),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 118/167 (71%), Positives = 127/167 (77%), Gaps = 1/167 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTP  121
            RL+DSI GEPGLG     G    GGG GGTTPTGYLGPPPVPTSSPPTTPAGAP KS T 
Sbjct  155  RLLDSIGGEPGLGSG-AGGGDVGGGGAGGTTPTGYLGPPPVPTSSPPTTPAGAPTKSATM  213

Query  122  DPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
             P  G   AS   G  GMPMVPPGA+GA  EG+ ++KPVEKR+T  A
Sbjct  214  PPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRLTAPA  260


>gi|183983066|ref|YP_001851357.1| hypothetical protein MMAR_3067 [Mycobacterium marinum M]
 gi|183176392|gb|ACC41502.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=322

 Score =  120 bits (302),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 113/166 (69%), Positives = 128/166 (78%), Gaps = 1/166 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            M+ Q  SGI GAL GA+GGV+GPLTQ+PQQA+QAGQGA+QPLM ALQQ+ G EGL+ ADG
Sbjct  97   MIPQMASGIGGALSGALGGVLGPLTQIPQQALQAGQGALQPLMGALQQSAGVEGLEAADG  156

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGT-TPTGYLGPPPVPTSSPPTTPAGAPAKSV  119
            ARLVDS+E EPGLGG         GGGGGG   PTGYLGPPPVPTSSPPTTPAGAP K  
Sbjct  157  ARLVDSLESEPGLGGGGAGELGTGGGGGGGGTIPTGYLGPPPVPTSSPPTTPAGAPTKPA  216

Query  120  TPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  165
            +     GTP +S P G TGMPM+PPGA+GAG  G +K+KP EKRVT
Sbjct  217  SMMSTGGTPSSSTPMGATGMPMMPPGAMGAGGTGGSKEKPAEKRVT  262


>gi|289748435|ref|ZP_06507813.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689022|gb|EFD56451.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=176

 Score =  115 bits (289),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG
Sbjct  116  MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  175

Query  61   A  61
            A
Sbjct  176  A  176


>gi|336459791|gb|EGO38705.1| hypothetical protein MAPs_46820 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=292

 Score =  115 bits (288),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 115/166 (70%), Positives = 126/166 (76%), Gaps = 5/166 (3%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            M+QQ +S +TGALGGA+GGVMGPLTQLPQQAMQAGQ A+QPLMSA+Q  +GA  L  AD 
Sbjct  79   MLQQMLSSVTGALGGAMGGVMGPLTQLPQQAMQAGQSALQPLMSAVQGAHGAASL--ADN  136

Query  61   ARLVDSI-EGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSV  119
            A LVDS+     GLGG  GAG  GAG GGGGT PT  LGPPPVPTSSPPTTPAG  AK+ 
Sbjct  137  AHLVDSVGGAGSGLGGGAGAGGGGAGLGGGGTVPTSSLGPPPVPTSSPPTTPAG--AKAA  194

Query  120  TPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  165
               P  G P   G  GMTGMPM+PPGA+GAG EG NKDKPVEKRVT
Sbjct  195  MMPPTGGMPAMPGQTGMTGMPMMPPGAMGAGGEGGNKDKPVEKRVT  240


>gi|41410423|ref|NP_963259.1| hypothetical protein MAP4325c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118465693|ref|YP_884398.1| hypothetical protein MAV_5287 [Mycobacterium avium 104]
 gi|41399257|gb|AAS06875.1| hypothetical protein MAP_4325c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118166980|gb|ABK67877.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=306

 Score =  115 bits (288),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 115/166 (70%), Positives = 126/166 (76%), Gaps = 5/166 (3%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            M+QQ +S +TGALGGA+GGVMGPLTQLPQQAMQAGQ A+QPLMSA+Q  +GA  L  AD 
Sbjct  93   MLQQMLSSVTGALGGAMGGVMGPLTQLPQQAMQAGQSALQPLMSAVQGAHGAASL--ADN  150

Query  61   ARLVDSI-EGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSV  119
            A LVDS+     GLGG  GAG  GAG GGGGT PT  LGPPPVPTSSPPTTPAG  AK+ 
Sbjct  151  AHLVDSVGGAGSGLGGGAGAGGGGAGLGGGGTVPTSSLGPPPVPTSSPPTTPAG--AKAA  208

Query  120  TPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  165
               P  G P   G  GMTGMPM+PPGA+GAG EG NKDKPVEKRVT
Sbjct  209  MMPPTGGMPAMPGQTGMTGMPMMPPGAMGAGGEGGNKDKPVEKRVT  254


>gi|118617824|ref|YP_906156.1| hypothetical protein MUL_2312 [Mycobacterium ulcerans Agy99]
 gi|118569934|gb|ABL04685.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=322

 Score =  105 bits (263),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 113/166 (69%), Positives = 128/166 (78%), Gaps = 1/166 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            M+ Q  SGI GAL GA+GGV+GPLTQ+PQQA+QAGQGA+QPLM ALQQ+ G EGL+ ADG
Sbjct  97   MIPQMASGIGGALSGALGGVLGPLTQIPQQALQAGQGALQPLMGALQQSAGVEGLEAADG  156

Query  61   ARLVDSIEGEPGLGGEPGAGDVGAGGGGGGT-TPTGYLGPPPVPTSSPPTTPAGAPAKSV  119
            ARLVDS+E EPGLGG         GGGGGG    TGYLGPPPVPTSSPPTTPAGAP K  
Sbjct  157  ARLVDSLESEPGLGGGGAGELGTGGGGGGGGTISTGYLGPPPVPTSSPPTTPAGAPTKPA  216

Query  120  TPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  165
            +    SGTP +S P G TGMPM+PPGA+GAG  G +K+KP EKRVT
Sbjct  217  SMMSTSGTPSSSTPMGATGMPMMPPGAMGAGGTGGSKEKPAEKRVT  262


>gi|240168378|ref|ZP_04747037.1| hypothetical protein MkanA1_03647 [Mycobacterium kansasii ATCC 
12478]
Length=343

 Score =  101 bits (252),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 59/71 (84%), Positives = 67/71 (95%), Gaps = 0/71 (0%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            M+QQ VSGITGA+GGAVGG++GPLTQLPQQAMQAGQGAMQPLMSALQQ++GA+GLD ADG
Sbjct  127  MIQQVVSGITGAVGGAVGGILGPLTQLPQQAMQAGQGAMQPLMSALQQSHGAQGLDAADG  186

Query  61   ARLVDSIEGEP  71
            ARLVDS+  EP
Sbjct  187  ARLVDSVGEEP  197


>gi|342862327|ref|ZP_08718968.1| hypothetical protein MCOL_25673 [Mycobacterium colombiense CECT 
3035]
 gi|342130184|gb|EGT83512.1| hypothetical protein MCOL_25673 [Mycobacterium colombiense CECT 
3035]
Length=266

 Score = 99.4 bits (246),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 94/163 (58%), Positives = 108/163 (67%), Gaps = 4/163 (2%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            +QQ +  +TGALGGA+GGVMGPLTQLPQQAMQAGQ A+QPLMSA+Q   GA G  +A+ A
Sbjct  55   IQQMLQSVTGALGGAIGGVMGPLTQLPQQAMQAGQSALQPLMSAVQ--GGAHGAGLANDA  112

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTP  121
             LVDS+    G G   GAG  GAG GGGGTTP   LG  P P  +       A AK+   
Sbjct  113  HLVDSVGSGGGSGLGGGAGGGGAGLGGGGTTPASSLG--PPPVPTSSPPTTPAAAKAAMM  170

Query  122  DPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRV  164
             P  G P   G +GMTGMPM+PPGA+G G EG  KD PVEKRV
Sbjct  171  PPTGGMPAMPGQSGMTGMPMMPPGAMGHGGEGGKKDSPVEKRV  213


>gi|254777635|ref|ZP_05219151.1| hypothetical protein MaviaA2_23601 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=132

 Score = 89.7 bits (221),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 49/69 (72%), Positives = 57/69 (83%), Gaps = 2/69 (2%)

Query  1    MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADG  60
            M+QQ +S +TGALGGA+GGVMGPLTQLPQQAMQAGQ A+QPLMSA+Q  +GA  L  AD 
Sbjct  62   MLQQMLSSVTGALGGAMGGVMGPLTQLPQQAMQAGQSALQPLMSAVQGAHGAASL--ADN  119

Query  61   ARLVDSIEG  69
            A LVDS+ G
Sbjct  120  AHLVDSVGG  128


>gi|306780111|ref|ZP_07418448.1| hypothetical protein TMBG_00631 [Mycobacterium tuberculosis SUMu002]
 gi|308327014|gb|EFP15865.1| hypothetical protein TMBG_00631 [Mycobacterium tuberculosis SUMu002]
Length=312

 Score = 89.4 bits (220),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 55/70 (79%), Positives = 59/70 (85%), Gaps = 0/70 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEP  71
            RL+DSI GEP
Sbjct  155  RLLDSIGGEP  164


>gi|323719381|gb|EGB28520.1| hypothetical protein TMMG_01360 [Mycobacterium tuberculosis CDC1551A]
Length=255

 Score = 88.6 bits (218),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 55/70 (79%), Positives = 59/70 (85%), Gaps = 0/70 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEP  71
            RL+DSI GEP
Sbjct  155  RLLDSIGGEP  164


>gi|308376907|ref|ZP_07668376.1| hypothetical protein TMHG_01272 [Mycobacterium tuberculosis SUMu008]
 gi|308349563|gb|EFP38414.1| hypothetical protein TMHG_01272 [Mycobacterium tuberculosis SUMu008]
Length=255

 Score = 88.6 bits (218),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 55/70 (79%), Positives = 59/70 (85%), Gaps = 0/70 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEP  71
            RL+DSI GEP
Sbjct  155  RLLDSIGGEP  164


>gi|254232248|ref|ZP_04925575.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|124601307|gb|EAY60317.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=178

 Score = 87.4 bits (215),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 55/70 (79%), Positives = 59/70 (85%), Gaps = 0/70 (0%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M Q  SGI GAL GA+GGVMGPLTQLPQQAMQAGQGAMQPLMSA+QQ  GA+GL   DGA
Sbjct  95   MAQMASGIGGALSGALGGVMGPLTQLPQQAMQAGQGAMQPLMSAMQQAQGADGLAAVDGA  154

Query  62   RLVDSIEGEP  71
            RL+DSI GEP
Sbjct  155  RLLDSIGGEP  164


>gi|254819418|ref|ZP_05224419.1| hypothetical protein MintA_05814 [Mycobacterium intracellulare 
ATCC 13950]
Length=258

 Score = 78.6 bits (192),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 91/142 (65%), Positives = 99/142 (70%), Gaps = 6/142 (4%)

Query  24   LTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGARLVDSIEGEPGLGGEPGAGDVG  83
            +TQLPQQAMQAGQ A+QPLMSA+Q  +GA  L  AD A LVDS+       G  G    G
Sbjct  71   MTQLPQQAMQAGQSALQPLMSAVQGAHGAASL--ADSAHLVDSVGSG--GAGLGGGSGGG  126

Query  84   AGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTPDPVSGTPRASGPAGMTGMPMVP  143
            AG GGGGT P   LGPPPVPTSSPPTTPAGA A  + P    G P   G  GMTGMPM+P
Sbjct  127  AGLGGGGTVPASSLGPPPVPTSSPPTTPAGAKA-PIMPA-TGGMPAMPGQTGMTGMPMMP  184

Query  144  PGALGAGAEGANKDKPVEKRVT  165
            PGA+GAG EG NKDKPVEKRVT
Sbjct  185  PGAMGAGGEGGNKDKPVEKRVT  206


>gi|289748434|ref|ZP_06507812.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689021|gb|EFD56450.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=96

 Score = 72.4 bits (176),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 47/50 (94%), Positives = 48/50 (96%), Gaps = 0/50 (0%)

Query  119  VTPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
            +TPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  A
Sbjct  1    MTPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTAPA  50


>gi|296167168|ref|ZP_06849575.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897490|gb|EFG77089.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=322

 Score = 64.3 bits (155),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 97/159 (62%), Positives = 112/159 (71%), Gaps = 5/159 (3%)

Query  8    GITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGARLVDSI  67
             ITGALGGAVGGVM PLTQLPQQAMQAGQ A+QPLMSA+Q   GA G  + + A LVDS+
Sbjct  118  SITGALGGAVGGVMQPLTQLPQQAMQAGQSAIQPLMSAVQ---GAHGAGLVNDAHLVDSV  174

Query  68   EGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTPDPVSGT  127
            + +    G       G  G GGGTTP   LGPPPVPTSSPPTTPAGA   ++TP PVSG 
Sbjct  175  KPD-AGLGGGAGSGGGGAGLGGGTTPASSLGPPPVPTSSPPTTPAGAAKAAMTP-PVSGA  232

Query  128  PRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTG  166
            P  +GP  M GM M+PPGA+G   EG NK+KP EKR++ 
Sbjct  233  PTTAGPTSMGGMGMMPPGAMGGHGEGGNKEKPPEKRISA  271


>gi|289762245|ref|ZP_06521623.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709751|gb|EFD73767.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=164

 Score = 59.3 bits (142),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 76/110 (70%), Positives = 81/110 (74%), Gaps = 1/110 (0%)

Query  59   DGARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKS  118
            DGARL+DSI GEPGLG   G GDVG GG GG T  TGYLGPPPVPTSSPPTTPAGAP KS
Sbjct  2    DGARLLDSIGGEPGLGSGAGGGDVGGGGAGGTTP-TGYLGPPPVPTSSPPTTPAGAPTKS  60

Query  119  VTPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCA  168
             T  P  G   AS   G  GMPMVPPGA+GA  EG+ ++KPVEKRVT  A
Sbjct  61   ATMPPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRVTAPA  110


>gi|333988703|ref|YP_004521317.1| hypothetical protein JDM601_0063 [Mycobacterium sp. JDM601]
 gi|333484671|gb|AEF34063.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=281

 Score = 56.2 bits (134),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 57/118 (49%), Positives = 67/118 (57%), Gaps = 9/118 (7%)

Query  2    MQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGA  61
            M  A+ GITGAL GA+G      ++LPQ  MQAGQGA+ PLM A  Q+    GL    G 
Sbjct  77   MTGAMQGITGALSGALGAA----SRLPQGLMQAGQGALSPLMGA-AQSLAKGGLG---GT  128

Query  62   RLVDSIEGEPGLGGEPGAGDVGAGGGGGG-TTPTGYLGPPPVPTSSPPTTPAGAPAKS  118
             L   I  +PGLGG         GGG G  TTP   LGPPPVP +S PTTPA + A +
Sbjct  129  TLASDISPDPGLGGGDFGSGGAGGGGLGMGTTPASNLGPPPVPGTSTPTTPASSLANT  186


>gi|254777634|ref|ZP_05219150.1| hypothetical protein MaviaA2_23596 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=108

 Score = 47.4 bits (111),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 38/58 (66%), Positives = 41/58 (71%), Gaps = 2/58 (3%)

Query  108  PTTPAGAPAKSVTPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVT  165
            PTTPAGA  K+    P  G P   G  GMTGMPM+PPGA+GAG EG NKDKP EKRVT
Sbjct  1    PTTPAGA--KAAMMPPTGGMPAMPGQTGMTGMPMMPPGAMGAGGEGGNKDKPAEKRVT  56



Lambda     K      H
   0.310    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 245963417238


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40