BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3899c Length=410 Score E Sequences producing significant alignments: (Bits) Value gi|289556167|ref|ZP_06445377.1| conserved hypothetical protein [... 786 0.0 gi|15611035|ref|NP_218416.1| hypothetical protein Rv3899c [Mycob... 785 0.0 gi|323717315|gb|EGB26520.1| hypothetical protein TMMG_00395 [Myc... 783 0.0 gi|289445499|ref|ZP_06435243.1| conserved hypothetical protein [... 782 0.0 gi|15843530|ref|NP_338567.1| hypothetical protein MT4016 [Mycoba... 778 0.0 gi|167969434|ref|ZP_02551711.1| hypothetical protein MtubH3_1598... 707 0.0 gi|148825107|ref|YP_001289861.1| hypothetical protein TBFG_13934... 699 0.0 gi|340628870|ref|YP_004747322.1| hypothetical protein MCAN_39201... 598 6e-169 gi|31795072|ref|NP_857565.1| hypothetical protein Mb3928c [Mycob... 570 2e-160 gi|289764092|ref|ZP_06523470.1| conserved hypothetical protein [... 511 8e-143 gi|289760071|ref|ZP_06519449.1| conserved hypothetical protein [... 509 5e-142 gi|308371543|ref|ZP_07425271.2| hypothetical protein TMDG_01859 ... 497 1e-138 gi|308373859|ref|ZP_07433871.2| putative Tat (twin-arginine tran... 478 5e-133 gi|296167167|ref|ZP_06849574.1| conserved hypothetical protein [... 444 1e-122 gi|289748436|ref|ZP_06507814.1| conserved hypothetical protein [... 421 2e-115 gi|41410424|ref|NP_963260.1| hypothetical protein MAP4326c [Myco... 387 3e-105 gi|118465280|ref|YP_884399.1| hypothetical protein MAV_5288 [Myc... 382 4e-104 gi|240168379|ref|ZP_04747038.1| hypothetical protein MkanA1_0365... 379 4e-103 gi|254819417|ref|ZP_05224418.1| hypothetical protein MintA_05809... 343 4e-92 gi|336459792|gb|EGO38706.1| hypothetical protein MAPs_46830 [Myc... 339 6e-91 gi|342862328|ref|ZP_08718969.1| hypothetical protein MCOL_25678 ... 337 3e-90 gi|254777636|ref|ZP_05219152.1| hypothetical protein MaviaA2_236... 314 2e-83 gi|183983065|ref|YP_001851356.1| hypothetical protein MMAR_3066 ... 305 1e-80 gi|308373321|ref|ZP_07431854.2| hypothetical protein TMEG_02449 ... 301 2e-79 gi|340627094|ref|YP_004745546.1| hypothetical protein MCAN_21071... 293 3e-77 gi|289554133|ref|ZP_06443343.1| conserved hypothetical protein [... 289 5e-76 gi|15841575|ref|NP_336612.1| hypothetical protein MT2144 [Mycoba... 289 6e-76 gi|289758201|ref|ZP_06517579.1| conserved hypothetical protein [... 289 7e-76 gi|148823298|ref|YP_001288052.1| hypothetical protein TBFG_12119... 289 7e-76 gi|121637967|ref|YP_978191.1| hypothetical protein BCG_2101 [Myc... 288 8e-76 gi|289443588|ref|ZP_06433332.1| conserved hypothetical protein [... 288 8e-76 gi|298525582|ref|ZP_07012991.1| conserved hypothetical protein [... 288 8e-76 gi|31793265|ref|NP_855758.1| hypothetical protein Mb2108 [Mycoba... 288 8e-76 gi|326903697|gb|EGE50630.1| hypothetical protein TBPG_01577 [Myc... 288 9e-76 gi|339632118|ref|YP_004723760.1| hypothetical protein MAF_20960 ... 288 1e-75 gi|289762244|ref|ZP_06521622.1| conserved hypothetical protein [... 288 2e-75 gi|15609219|ref|NP_216598.1| hypothetical protein Rv2082 [Mycoba... 285 8e-75 gi|333992294|ref|YP_004524908.1| hypothetical protein JDM601_365... 271 2e-70 gi|254364895|ref|ZP_04980941.1| hypothetical protein TBHG_02040 ... 270 3e-70 gi|289447703|ref|ZP_06437447.1| conserved hypothetical protein [... 252 1e-64 gi|308406285|ref|ZP_07495813.2| hypothetical protein TMLG_00396 ... 234 2e-59 gi|340627090|ref|YP_004745542.1| hypothetical protein MCAN_21031... 232 9e-59 gi|333988704|ref|YP_004521318.1| hypothetical protein JDM601_006... 229 8e-58 gi|167966573|ref|ZP_02548850.1| hypothetical protein MtubH3_0028... 210 4e-52 gi|289748437|ref|ZP_06507815.1| conserved hypothetical protein [... 179 8e-43 gi|340627091|ref|YP_004745543.1| hypothetical protein MCAN_21041... 159 9e-37 gi|289750678|ref|ZP_06510056.1| LOW QUALITY PROTEIN: conserved h... 125 2e-26 gi|333988685|ref|YP_004521299.1| hypothetical protein JDM601_004... 122 9e-26 gi|118615961|ref|YP_904293.1| hypothetical protein MUL_0047 [Myc... 120 5e-25 gi|240172404|ref|ZP_04751063.1| hypothetical protein MkanA1_2401... 116 5e-24 >gi|289556167|ref|ZP_06445377.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289747743|ref|ZP_06507121.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|308380856|ref|ZP_07491260.2| putative Tat (twin-arginine translocation) pathway signal sequence containing protein [Mycobacterium tuberculosis SUMu011] gi|289440799|gb|EFD23292.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289688271|gb|EFD55759.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|308360270|gb|EFP49121.1| putative Tat (twin-arginine translocation) pathway signal sequence containing protein [Mycobacterium tuberculosis SUMu011] gi|328460677|gb|AEB06100.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length=439 Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT Sbjct 30 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 89 Query 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA Sbjct 90 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 149 Query 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS Sbjct 150 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 209 Query 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP Sbjct 210 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 269 Query 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA Sbjct 270 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 329 Query 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA Sbjct 330 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 389 Query 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 390 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 439 >gi|15611035|ref|NP_218416.1| hypothetical protein Rv3899c [Mycobacterium tuberculosis H37Rv] gi|148663766|ref|YP_001285289.1| hypothetical protein MRA_3938 [Mycobacterium tuberculosis H37Ra] gi|253800949|ref|YP_003033951.1| hypothetical protein TBMG_03947 [Mycobacterium tuberculosis KZN 1435] 17 more sequence titles Length=410 Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT Sbjct 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 Query 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA Sbjct 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 Query 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS Sbjct 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 Query 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP Sbjct 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 Query 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA Sbjct 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 Query 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA Sbjct 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 Query 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 >gi|323717315|gb|EGB26520.1| hypothetical protein TMMG_00395 [Mycobacterium tuberculosis CDC1551A] Length=410 Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/410 (99%), Positives = 409/410 (99%), Gaps = 0/410 (0%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT Sbjct 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 Query 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 PANTSGAPPASTGTTGPVAPTVVTAGPVA PAAPVVGGSAVPAGPLPAYGSDLRPPVVAA Sbjct 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAVPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 Query 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS Sbjct 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 Query 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP Sbjct 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 Query 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA Sbjct 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 Query 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA Sbjct 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 Query 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 >gi|289445499|ref|ZP_06435243.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289572551|ref|ZP_06452778.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339633889|ref|YP_004725531.1| hypothetical protein MAF_39140 [Mycobacterium africanum GM041182] gi|289418457|gb|EFD15658.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289536982|gb|EFD41560.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339333245|emb|CCC28982.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=410 Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/410 (99%), Positives = 409/410 (99%), Gaps = 0/410 (0%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT Sbjct 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 Query 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 PANT GAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA Sbjct 61 PANTPGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 Query 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS Sbjct 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 Query 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP Sbjct 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 Query 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA Sbjct 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 Query 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA Sbjct 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 Query 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 >gi|15843530|ref|NP_338567.1| hypothetical protein MT4016 [Mycobacterium tuberculosis CDC1551] gi|13883906|gb|AAK48381.1| hypothetical protein MT4016 [Mycobacterium tuberculosis CDC1551] Length=410 Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/410 (99%), Positives = 407/410 (99%), Gaps = 0/410 (0%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT Sbjct 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 Query 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 PANTSGAPPASTGTTGPVAPTVVTAGPVA PAAPVVGGSAVPAGPLPAYGSDLRPPVVAA Sbjct 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAVPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 Query 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS Sbjct 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 Query 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTL TDLAGGWIPP Sbjct 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLWSTDLAGGWIPP 240 Query 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA Sbjct 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 Query 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA Sbjct 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 Query 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 >gi|167969434|ref|ZP_02551711.1| hypothetical protein MtubH3_15982 [Mycobacterium tuberculosis H37Ra] gi|339296705|gb|AEJ48816.1| hypothetical protein CCDC5079_3627 [Mycobacterium tuberculosis CCDC5079] Length=370 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/370 (99%), Positives = 370/370 (100%), Gaps = 0/370 (0%) Query 41 VVSAPTMAAGIEATHGPVDTPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSA 100 +VSAPTMAAGIEATHGPVDTPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSA Sbjct 1 MVSAPTMAAGIEATHGPVDTPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSA 60 Query 101 VPAGPLPAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASK 160 VPAGPLPAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASK Sbjct 61 VPAGPLPAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASK 120 Query 161 AVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGL 220 AVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGL Sbjct 121 AVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGL 180 Query 221 RDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTY 280 RDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTY Sbjct 181 RDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTY 240 Query 281 VAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLE 340 VAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLE Sbjct 241 VAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLE 300 Query 341 NEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTT 400 NEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTT Sbjct 301 NEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTT 360 Query 401 RRGGSRGFAA 410 RRGGSRGFAA Sbjct 361 RRGGSRGFAA 370 >gi|148825107|ref|YP_001289861.1| hypothetical protein TBFG_13934 [Mycobacterium tuberculosis F11] gi|148723634|gb|ABR08259.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] Length=364 Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/364 (100%), Positives = 364/364 (100%), Gaps = 0/364 (0%) Query 47 MAAGIEATHGPVDTPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPL 106 MAAGIEATHGPVDTPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPL Sbjct 1 MAAGIEATHGPVDTPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPL 60 Query 107 PAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQA 166 PAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQA Sbjct 61 PAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQA 120 Query 167 GASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTT 226 GASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTT Sbjct 121 GASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTT 180 Query 227 TLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGP 286 TLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGP Sbjct 181 TLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGP 240 Query 287 DAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELL 346 DAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELL Sbjct 241 DAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELL 300 Query 347 HGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSR 406 HGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSR Sbjct 301 HGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSR 360 Query 407 GFAA 410 GFAA Sbjct 361 GFAA 364 >gi|340628870|ref|YP_004747322.1| hypothetical protein MCAN_39201 [Mycobacterium canettii CIPT 140010059] gi|340007060|emb|CCC46251.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=735 Score = 598 bits (1542), Expect = 6e-169, Method: Compositional matrix adjust. Identities = 375/410 (92%), Positives = 390/410 (96%), Gaps = 0/410 (0%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQ PPIT PPVVSAPTMAAGIEATHGPVDT Sbjct 326 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQVAPPITAPPVVSAPTMAAGIEATHGPVDT 385 Query 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAA 120 PANT GAPPAS GTTGPVAP VVTAGPVAAPAAPVVGGSA+P+GPLPAYGSDLRPPVVA Sbjct 386 PANTPGAPPASIGTTGPVAPAVVTAGPVAAPAAPVVGGSAMPSGPLPAYGSDLRPPVVAP 445 Query 121 PAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALS 180 PA+PSV TAPVSGAPVAPSASS+PSAGGALVSPVERAASKAVAGQA AS+S+MAGASA S Sbjct 446 PAMPSVSTAPVSGAPVAPSASSSPSAGGALVSPVERAASKAVAGQASASASSMAGASAAS 505 Query 181 ATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPP 240 ATAGATAGAVSARAAEQQRLQ+IVDAVARQEPR+SWAAGLRDDGTTTLLVTDLAGGW+PP Sbjct 506 ATAGATAGAVSARAAEQQRLQQIVDAVARQEPRLSWAAGLRDDGTTTLLVTDLAGGWVPP 565 Query 241 HVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA 300 HVRLPANVTLLEP ARRRD V+DLLGAVVAVAAH+SN YVAEPGPDAP L+GDRSARSA Sbjct 566 HVRLPANVTLLEPAARRRDVGVVDLLGAVVAVAAHQSNGYVAEPGPDAPVLSGDRSARSA 625 Query 301 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKA 360 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENE ELL GC AVKESVLKA Sbjct 626 IPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEVELLRGCTAAVKESVLKA 685 Query 361 YPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 YPSH+LT VGDWMLLAAIEALIDEQDYLANYH+AWYA+TTRRGGSRGFAA Sbjct 686 YPSHDLTGVGDWMLLAAIEALIDEQDYLANYHVAWYAITTRRGGSRGFAA 735 >gi|31795072|ref|NP_857565.1| hypothetical protein Mb3928c [Mycobacterium bovis AF2122/97] gi|121639810|ref|YP_980034.1| hypothetical protein BCG_3955c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992305|ref|YP_002646995.1| hypothetical protein JTY_3957 [Mycobacterium bovis BCG str. Tokyo 172] 10 more sequence titles Length=293 Score = 570 bits (1469), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 292/293 (99%), Positives = 293/293 (100%), Gaps = 0/293 (0%) Query 118 VAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGAS 177 +AAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGAS Sbjct 1 MAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGAS 60 Query 178 ALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGW 237 ALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGW Sbjct 61 ALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGW 120 Query 238 IPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSA 297 IPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSA Sbjct 121 IPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSA 180 Query 298 RSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESV 357 RSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESV Sbjct 181 RSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESV 240 Query 358 LKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 LKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 241 LKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 293 >gi|289764092|ref|ZP_06523470.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711598|gb|EFD75614.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=257 Score = 511 bits (1316), Expect = 8e-143, Method: Compositional matrix adjust. Identities = 256/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%) Query 154 VERAASKAVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPR 213 +ERAASKAVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPR Sbjct 1 MERAASKAVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPR 60 Query 214 ISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVA 273 ISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVA Sbjct 61 ISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVA 120 Query 274 AHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAV 333 AHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAV Sbjct 121 AHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAV 180 Query 334 RKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHL 393 RKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHL Sbjct 181 RKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHL 240 Query 394 AWYAVTTRRGGSRGFAA 410 AWYAVTTRRGGSRGFAA Sbjct 241 AWYAVTTRRGGSRGFAA 257 >gi|289760071|ref|ZP_06519449.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289715635|gb|EFD79647.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=319 Score = 509 bits (1310), Expect = 5e-142, Method: Compositional matrix adjust. Identities = 270/281 (97%), Positives = 271/281 (97%), Gaps = 0/281 (0%) Query 130 PVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALSATAGATAGA 189 P+S P PSAGGALVSPVERAASKAVAGQAGASSSTMAGASALSATAGATAGA Sbjct 39 PLSARRWPPRRHRPPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALSATAGATAGA 98 Query 190 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 249 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT Sbjct 99 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 158 Query 250 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 309 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP Sbjct 159 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 218 Query 310 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 369 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV Sbjct 219 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 278 Query 370 GDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 GDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 279 GDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 319 >gi|308371543|ref|ZP_07425271.2| hypothetical protein TMDG_01859 [Mycobacterium tuberculosis SUMu004] gi|308336351|gb|EFP25202.1| hypothetical protein TMDG_01859 [Mycobacterium tuberculosis SUMu004] Length=249 Score = 497 bits (1280), Expect = 1e-138, Method: Compositional matrix adjust. Identities = 248/249 (99%), Positives = 249/249 (100%), Gaps = 0/249 (0%) Query 162 VAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLR 221 +AGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLR Sbjct 1 MAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLR 60 Query 222 DDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYV 281 DDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYV Sbjct 61 DDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYV 120 Query 282 AEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLEN 341 AEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLEN Sbjct 121 AEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLEN 180 Query 342 EAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTR 401 EAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTR Sbjct 181 EAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTR 240 Query 402 RGGSRGFAA 410 RGGSRGFAA Sbjct 241 RGGSRGFAA 249 >gi|308373859|ref|ZP_07433871.2| putative Tat (twin-arginine translocation) pathway signal sequence [Mycobacterium tuberculosis SUMu006] gi|308343864|gb|EFP32715.1| putative Tat (twin-arginine translocation) pathway signal sequence [Mycobacterium tuberculosis SUMu006] gi|339300297|gb|AEJ52407.1| hypothetical protein CCDC5180_3570 [Mycobacterium tuberculosis CCDC5180] Length=238 Score = 478 bits (1231), Expect = 5e-133, Method: Compositional matrix adjust. Identities = 238/238 (100%), Positives = 238/238 (100%), Gaps = 0/238 (0%) Query 173 MAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTD 232 MAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTD Sbjct 1 MAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTD 60 Query 233 LAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALT 292 LAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALT Sbjct 61 LAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALT 120 Query 293 GDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITA 352 GDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITA Sbjct 121 GDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITA 180 Query 353 VKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 VKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 181 VKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 238 >gi|296167167|ref|ZP_06849574.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897489|gb|EFG77088.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=720 Score = 444 bits (1143), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 276/402 (69%), Positives = 313/402 (78%), Gaps = 5/402 (1%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTM-AAGIEATHGPVD 59 M TGQPA AGA +S GAM AM+SG+ PPQA PP TPPV APT +AG+ G Sbjct 320 MATGQPAGAGAQGISSGAMNAMESGAGAPPQAGPPAGTPPV--APTAPSAGVFIPTGTPA 377 Query 60 TPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVA 119 P +TGT PVAP V+T G + AA V GG +VPAGPLPAYG+DLRP A Sbjct 378 DAPPPPAPAPPATGTA-PVAP-VMTGGSWSGTAASVSGGPSVPAGPLPAYGADLRPTAAA 435 Query 120 APAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASAL 179 PA PS PVSGAPVAPS S+PSAGG VSPVERAA A AGQAGAS S+M GASA+ Sbjct 436 PPATPSAAAGPVSGAPVAPSPGSSPSAGGPFVSPVERAAQGAAAGQAGASPSSMVGASAM 495 Query 180 SATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIP 239 SA GA AGAVS+RAAEQQRLQR+VDAVARQEPR+SWAAGLRDDGTTTLLVTDLAGGW+P Sbjct 496 SAATGAAAGAVSSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLLVTDLAGGWMP 555 Query 240 PHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARS 299 PHVRLPA+VTLLEP ARRRDA+V+DLLGAVV AAHE NTYVAE P+AP L+GDR AR+ Sbjct 556 PHVRLPAHVTLLEPAARRRDANVVDLLGAVVVAAAHEHNTYVAESDPEAPTLSGDRPART 615 Query 300 AIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLK 359 +VDE GPTLVEAVRRRD LPRIAQAIA PAVRKTGVL++EAELLH C+ +++SVL Sbjct 616 VASQVDELGPTLVEAVRRRDGLPRIAQAIAAPAVRKTGVLDSEAELLHKCMNDIQQSVLS 675 Query 360 AYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTR 401 YP+H++ AVGDWMLLAAIEA+I+ +YLANYHLAW+ TR Sbjct 676 LYPNHDVAAVGDWMLLAAIEAVIEGHEYLANYHLAWFIAITR 717 >gi|289748436|ref|ZP_06507814.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|308406284|ref|ZP_07495812.2| hypothetical protein TMLG_00395 [Mycobacterium tuberculosis SUMu012] gi|289689023|gb|EFD56452.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|308363895|gb|EFP52746.1| hypothetical protein TMLG_00395 [Mycobacterium tuberculosis SUMu012] Length=207 Score = 421 bits (1081), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 206/207 (99%), Positives = 207/207 (100%), Gaps = 0/207 (0%) Query 204 VDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVI 263 +DAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVI Sbjct 1 MDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVI 60 Query 264 DLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPR 323 DLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPR Sbjct 61 DLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPR 120 Query 324 IAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALID 383 IAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALID Sbjct 121 IAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALID 180 Query 384 EQDYLANYHLAWYAVTTRRGGSRGFAA 410 EQDYLANYHLAWYAVTTRRGGSRGFAA Sbjct 181 EQDYLANYHLAWYAVTTRRGGSRGFAA 207 >gi|41410424|ref|NP_963260.1| hypothetical protein MAP4326c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399258|gb|AAS06876.1| hypothetical protein MAP_4326c [Mycobacterium avium subsp. paratuberculosis K-10] Length=719 Score = 387 bits (993), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 258/406 (64%), Positives = 305/406 (76%), Gaps = 12/406 (2%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTM-AAGIEATHGPVD 59 + TGQ G + A+ AM++G+ P TPP+ APT+ +AG P Sbjct 325 LATGQATGPGGQAFPANALQAMETGAPQTPAGTPPV-------APTVPSAGAFIAATPPV 377 Query 60 TPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVA 119 + P++ G PVAP V+T G ++ A GG +VP+G LPAYGSDLRPPVVA Sbjct 378 DAPPAAAPAPSTAGGAAPVAPAVMTGGSWSSAA---TGGPSVPSGSLPAYGSDLRPPVVA 434 Query 120 APAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASAL 179 AP+VPS PT PVSGAPVAPS +S+PSAGG LVSPVER+A+ A AGQAGA SST+A ASA+ Sbjct 435 APSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQAGAGSSTLANASAV 494 Query 180 SATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIP 239 SATAGATAGA S+RAAEQQRLQR+VDAVARQEPR+SWAAGLRDDGTTTL VTDLA GWIP Sbjct 495 SATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTL-VTDLASGWIP 553 Query 240 PHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARS 299 PH+RLPA+VTLLEP ARR DA+V+DLLGAV AAH +NTYVAEPG D P L+GDR ARS Sbjct 554 PHLRLPAHVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARS 613 Query 300 AIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLK 359 A P++DE GPTLV+AVRRRD LPRIAQA+A PAVRKTGVLE+E +L C ++ +VL Sbjct 614 AAPQIDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLT 673 Query 360 AYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGS 405 AYP H+ AVGDWMLLAAI+ALID +YLA+YHLAW+ R GS Sbjct 674 AYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS 719 >gi|118465280|ref|YP_884399.1| hypothetical protein MAV_5288 [Mycobacterium avium 104] gi|118166567|gb|ABK67464.1| conserved hypothetical protein [Mycobacterium avium 104] Length=419 Score = 382 bits (982), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 258/406 (64%), Positives = 305/406 (76%), Gaps = 11/406 (2%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTM-AAGIEATHGPVD 59 + TGQ G + S A+ AM++G+ P TPP+ APT+ +AG P Sbjct 24 LATGQATGPGGQAFSANALQAMETGAPQTPAGTPPV-------APTVPSAGAFIAATPPV 76 Query 60 TPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVA 119 + P++ G PVAP V+T G ++ A GG +VP+G LPAYGSDLRPPV+A Sbjct 77 DAPPAAAPAPSAAGGAAPVAPAVMTGGSWSSAA---TGGPSVPSGSLPAYGSDLRPPVLA 133 Query 120 APAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASAL 179 AP+VPS PT PVSGAPVAPS +S+PSAGG LVSPVER+A+ A AGQAGA SST+A ASA+ Sbjct 134 APSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQAGAGSSTLANASAV 193 Query 180 SATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIP 239 SA AGATAGA S+RAAEQQRLQR+VDAVARQEPR+SWAAGLRDDG TTLLVTDLA GWIP Sbjct 194 SAAAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGITTLLVTDLASGWIP 253 Query 240 PHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARS 299 PHVRLPA+VTLLEP ARR DA+V+DLLGAV AAH +NTYVAEPG D P L+GDR ARS Sbjct 254 PHVRLPAHVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARS 313 Query 300 AIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLK 359 A P++DE GPTLV+AVRRRD LPRIAQA+A PAVRKTGVLE+E +L C ++ +VL Sbjct 314 AAPQIDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLT 373 Query 360 AYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGS 405 AYP H+ AVGDWMLLAAI+ALID +YLA+YHLAW+ R GS Sbjct 374 AYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS 419 >gi|240168379|ref|ZP_04747038.1| hypothetical protein MkanA1_03652 [Mycobacterium kansasii ATCC 12478] Length=232 Score = 379 bits (974), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 185/232 (80%), Positives = 203/232 (88%), Gaps = 0/232 (0%) Query 179 LSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWI 238 +SA GAT G V+ RA EQQRLQRIVDAVARQE R+SWAAGLRDDG+TTLLVTDLAGGWI Sbjct 1 MSAATGATVGVVTTRAVEQQRLQRIVDAVARQESRLSWAAGLRDDGSTTLLVTDLAGGWI 60 Query 239 PPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSAR 298 PPHVRL ANVTLLEPTARRRDA V+DLLGAVV AAHE N YVAEPGPDAPALTGDR+AR Sbjct 61 PPHVRLTANVTLLEPTARRRDASVVDLLGAVVTAAAHEPNAYVAEPGPDAPALTGDRAAR 120 Query 299 SAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVL 358 SA PKVDE GPTLVEAVRRRD LPRIAQAIA PAVR+TGVLENE ++L I A++ESVL Sbjct 121 SAAPKVDELGPTLVEAVRRRDGLPRIAQAIAAPAVRRTGVLENETKMLRDRIAAIQESVL 180 Query 359 KAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGSRGFAA 410 AYP+ +L+AVGDWML+AAI+ALID +YLANYH+AWYAV RRGGS GFAA Sbjct 181 DAYPNQDLSAVGDWMLMAAIDALIDGHEYLANYHMAWYAVICRRGGSSGFAA 232 >gi|254819417|ref|ZP_05224418.1| hypothetical protein MintA_05809 [Mycobacterium intracellulare ATCC 13950] Length=233 Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 162/213 (77%), Positives = 185/213 (87%), Gaps = 0/213 (0%) Query 193 RAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLE 252 RAAEQQRLQR+VDAVARQEPR+SWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPA+V+LLE Sbjct 21 RAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPAHVSLLE 80 Query 253 PTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLV 312 P+ARR DA+V+DLLGA+ AAH +NTYVAEPG D PAL+GDR ARSA P+VDE GPTLV Sbjct 81 PSARRHDANVVDLLGAITVAAAHHANTYVAEPGSDEPALSGDRPARSAAPQVDELGPTLV 140 Query 313 EAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDW 372 EAVRRRD LPRIAQA+A PAVRKTGVLE+E E+LH C+ ++ SV+ AYP+H+ AVGDW Sbjct 141 EAVRRRDGLPRIAQAVAAPAVRKTGVLESEIEMLHECVADIQHSVMSAYPNHDPAAVGDW 200 Query 373 MLLAAIEALIDEQDYLANYHLAWYAVTTRRGGS 405 MLLAAIEALID +YL NYHLAW+ + R GS Sbjct 201 MLLAAIEALIDGHEYLTNYHLAWFGAISHRSGS 233 >gi|336459792|gb|EGO38706.1| hypothetical protein MAPs_46830 [Mycobacterium avium subsp. paratuberculosis S397] Length=282 Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 208/283 (74%), Positives = 238/283 (85%), Gaps = 1/283 (0%) Query 123 VPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTMAGASALSAT 182 +PS PT PVSGAPVAPS +S+PSAGG LVSPVER+A+ A AGQAGA SST+A ASA+SAT Sbjct 1 MPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQAGAGSSTLANASAVSAT 60 Query 183 AGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHV 242 AGATAGA S+RAAEQQRLQR+VDAVARQEPR+SWAAGLRDDGTTTL VTDLA GWIPPH+ Sbjct 61 AGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTL-VTDLASGWIPPHL 119 Query 243 RLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIP 302 RLPA+VTLLEP ARR DA+V+DLLGAV AAH +NTYVAEPG D P L+GDR ARSA P Sbjct 120 RLPAHVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAP 179 Query 303 KVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYP 362 ++DE GPTLV+AVRRRD LPRIAQA+A PAVRKTGVLE+E +L C ++ +VL AYP Sbjct 180 QIDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYP 239 Query 363 SHELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGS 405 H+ AVGDWMLLAAI+ALID +YLA+YHLAW+ R GS Sbjct 240 HHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS 282 >gi|342862328|ref|ZP_08718969.1| hypothetical protein MCOL_25678 [Mycobacterium colombiense CECT 3035] gi|342130185|gb|EGT83513.1| hypothetical protein MCOL_25678 [Mycobacterium colombiense CECT 3035] Length=233 Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 162/216 (75%), Positives = 186/216 (87%), Gaps = 0/216 (0%) Query 190 VSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVT 249 VSAR AEQQRLQR+VDAVARQEPR+SWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPA+V+ Sbjct 18 VSARTAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPAHVS 77 Query 250 LLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGP 309 LLEP+ARR DA+V+DLLGA+ AAH +NTYVAEPGPD PAL+GDR ARSA P VDE GP Sbjct 78 LLEPSARRHDANVVDLLGAITVAAAHHANTYVAEPGPDEPALSGDRPARSAAPPVDELGP 137 Query 310 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 369 TLV+AVRRRD LPRIAQA+A PAVR+TGVLE+E +L C+ +++SVL AYP+H+ AV Sbjct 138 TLVDAVRRRDGLPRIAQAVAAPAVRQTGVLESETAMLRECVAEIQDSVLTAYPNHDPAAV 197 Query 370 GDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRGGS 405 GDWMLLAAIEALID +YLANYHLAW+ + R S Sbjct 198 GDWMLLAAIEALIDGHEYLANYHLAWFDAVSHRMSS 233 >gi|254777636|ref|ZP_05219152.1| hypothetical protein MaviaA2_23606 [Mycobacterium avium subsp. avium ATCC 25291] Length=251 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 183/252 (73%), Positives = 211/252 (84%), Gaps = 1/252 (0%) Query 154 VERAASKAVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPR 213 +ER+A+ A AGQAGA SST+A ASA+SATAGATAGA S+RAAEQQRLQR+VDAVARQEPR Sbjct 1 MERSAASAAAGQAGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPR 60 Query 214 ISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVA 273 +SWAAGLRDDGTTTL VTDLA GWIPPH+RLPA+VTLLEP ARR DA+V+DLLGAV A Sbjct 61 LSWAAGLRDDGTTTL-VTDLASGWIPPHLRLPAHVTLLEPAARRHDANVVDLLGAVTVAA 119 Query 274 AHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAV 333 AH +NTYVAEPG D P L+GDR ARSA P++DE GPTLV+AVRRRD LPRIAQA+A PAV Sbjct 120 AHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQAVAAPAV 179 Query 334 RKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHL 393 RKTGVLE+E +L C ++ +VL AYP H+ AVGDWMLLAAI+ALID +YLA+YHL Sbjct 180 RKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHL 239 Query 394 AWYAVTTRRGGS 405 AW+ R GS Sbjct 240 AWFQAINHRAGS 251 >gi|183983065|ref|YP_001851356.1| hypothetical protein MMAR_3066 [Mycobacterium marinum M] gi|183176391|gb|ACC41501.1| conserved hypothetical protein [Mycobacterium marinum M] Length=718 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 225/411 (55%), Positives = 263/411 (64%), Gaps = 18/411 (4%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGP--- 57 M TG PAAAGA+S+S GAMTA P P + P AG TH P Sbjct 315 MSTGAPAAAGANSISAGAMTAATEPPPPTTAPPAAPLIP-PSTVPATGAGF--THVPDAG 371 Query 58 ----VDTPANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDL 113 +P + TG VAP ++ GPV AP VG PAGPLPAYGSDL Sbjct 372 LGAAPTSPPPVAPPTSDMTGGVTTVAP-MMAGGPVTGSVAPAVG---APAGPLPAYGSDL 427 Query 114 RPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGASSSTM 173 RPP VA PAVPS PT PVSGAPVA +SS SAGG++VSPV ++++ A S T Sbjct 428 RPPTVAPPAVPSAPTGPVSGAPVASPSSSP-SAGGSMVSPVAKSSAHDAAQAQTTSGPTS 486 Query 174 AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDL 233 + +AT GA G + R+AEQQRL+RIVDAVARQEP +SWAAGLRDDG TTLLVTDL Sbjct 487 MAGATAAATTGAVTGDSAKRSAEQQRLRRIVDAVARQEPGLSWAAGLRDDGRTTLLVTDL 546 Query 234 AGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTG 293 AGGWIPPHVRLP++VTLLEP RR D DLLGAV A H+ + Y+ EPG DAP L G Sbjct 547 AGGWIPPHVRLPSHVTLLEPATRRSDIGAADLLGAVTISAVHQPHGYIGEPGRDAPKLAG 606 Query 294 DRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAV 353 DR+AR A P++DE GPTL E VRRRD LPR+AQ +A+ A R GV +NEAELL + + Sbjct 607 DRAARIA-PEIDELGPTLAEHVRRRDGLPRVAQVVAVAAARNYGVPDNEAELLRDRASDI 665 Query 354 KESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 SVL AYP H+L DWMLLAAI+ALID ANYHLAW A++ RR Sbjct 666 HRSVLAAYPHHDLAEATDWMLLAAIDALIDGNRTAANYHLAWAMAAMSMRR 716 >gi|308373321|ref|ZP_07431854.2| hypothetical protein TMEG_02449 [Mycobacterium tuberculosis SUMu005] gi|308338083|gb|EFP26934.1| hypothetical protein TMEG_02449 [Mycobacterium tuberculosis SUMu005] Length=314 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 180/304 (60%), Positives = 218/304 (72%), Gaps = 7/304 (2%) Query 102 PAGPLPAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKA 161 PAGPLPAYG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ Sbjct 13 PAGPLPAYGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAP 69 Query 162 VAGQAGASSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGL 220 QA S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGL Sbjct 70 ATTQAQPSNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGL 129 Query 221 RDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTY 280 RD+G TTLLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y Sbjct 130 RDNGQTTLLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGY 189 Query 281 VAEPGPDAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLE 340 +++P PD PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV + Sbjct 190 LSQPDPDTPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPD 248 Query 341 NEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAV 398 NE +LLH T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A+ Sbjct 249 NETDLLHHKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAI 308 Query 399 TTRR 402 +TRR Sbjct 309 STRR 312 >gi|340627094|ref|YP_004745546.1| hypothetical protein MCAN_21071 [Mycobacterium canettii CIPT 140010059] gi|340005284|emb|CCC44439.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=717 Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 214/297 (73%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPP+ PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 423 YGADLRPPMTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTTPATTQAQP 479 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 480 SNPTPPITSATAAATTGAVAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 539 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLAGGWIPPH+RLPA++TLLEP RRR A V DLLGA AAH + Y+++P PD Sbjct 540 LLVTDLAGGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGATTVAAAHHPHGYLSQPDPD 599 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A +++E GPTLVE VRRRD+LPRIAQA+ + A R GV +NE +LLH Sbjct 600 TPALTGDRTARIAA-RIEELGPTLVETVRRRDTLPRIAQAVVVAATRNYGVPDNETDLLH 658 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 659 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 715 >gi|289554133|ref|ZP_06443343.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289438765|gb|EFD21258.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=315 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 174/298 (59%), Positives = 212/298 (72%), Gaps = 7/298 (2%) Query 108 AYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAG 167 AYG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 20 AYGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQ 76 Query 168 ASSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTT 226 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G T Sbjct 77 PSNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQT 136 Query 227 TLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGP 286 TLLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P P Sbjct 137 TLLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDP 196 Query 287 DAPALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELL 346 D PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LL Sbjct 197 DTPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLL 255 Query 347 HGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 H T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 256 HHKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 313 >gi|15841575|ref|NP_336612.1| hypothetical protein MT2144 [Mycobacterium tuberculosis CDC1551] gi|13881823|gb|AAK46426.1| hypothetical protein MT2144 [Mycobacterium tuberculosis CDC1551] Length=719 Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 425 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 481 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 482 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 541 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 542 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 601 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 602 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 660 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 661 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 717 >gi|289758201|ref|ZP_06517579.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289713765|gb|EFD77777.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=324 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 30 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 86 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 87 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 146 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 147 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 206 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 207 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 265 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 266 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 322 >gi|148823298|ref|YP_001288052.1| hypothetical protein TBFG_12119 [Mycobacterium tuberculosis F11] gi|253798859|ref|YP_003031860.1| hypothetical protein TBMG_01899 [Mycobacterium tuberculosis KZN 1435] gi|308370910|ref|ZP_07667042.1| hypothetical protein TMCG_00179 [Mycobacterium tuberculosis SUMu003] gi|148721825|gb|ABR06450.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253320362|gb|ACT24965.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|308330449|gb|EFP19300.1| hypothetical protein TMCG_00179 [Mycobacterium tuberculosis SUMu003] gi|328458617|gb|AEB04040.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] gi|344219909|gb|AEN00540.1| hypothetical protein MTCTRI2_2121 [Mycobacterium tuberculosis CTRI-2] Length=721 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 427 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 483 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 484 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 543 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 544 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 603 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 604 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 662 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 663 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 719 >gi|121637967|ref|YP_978191.1| hypothetical protein BCG_2101 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990461|ref|YP_002645148.1| hypothetical protein JTY_2095 [Mycobacterium bovis BCG str. Tokyo 172] gi|121493615|emb|CAL72089.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773574|dbj|BAH26380.1| hypothetical protein JTY_2095 [Mycobacterium bovis BCG str. Tokyo 172] gi|341602005|emb|CCC64679.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=695 Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 401 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 457 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 458 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 517 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 518 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 577 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 578 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 636 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 637 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 693 >gi|289443588|ref|ZP_06433332.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289570195|ref|ZP_06450422.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289574763|ref|ZP_06454990.1| predicted protein [Mycobacterium tuberculosis K85] gi|289754193|ref|ZP_06513571.1| hypothetical protein TBGG_01309 [Mycobacterium tuberculosis EAS054] gi|289416507|gb|EFD13747.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289539194|gb|EFD43772.1| predicted protein [Mycobacterium tuberculosis K85] gi|289543949|gb|EFD47597.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289694780|gb|EFD62209.1| hypothetical protein TBGG_01309 [Mycobacterium tuberculosis EAS054] Length=721 Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 427 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 483 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 484 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 543 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 544 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 603 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 604 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 662 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 663 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 719 >gi|298525582|ref|ZP_07012991.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495376|gb|EFI30670.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=721 Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 427 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 483 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 484 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 543 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 544 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 603 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 604 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 662 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 663 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 719 >gi|31793265|ref|NP_855758.1| hypothetical protein Mb2108 [Mycobacterium bovis AF2122/97] gi|31618857|emb|CAD96961.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=721 Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 427 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 483 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 484 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 543 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 544 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 603 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 604 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 662 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 663 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 719 >gi|326903697|gb|EGE50630.1| hypothetical protein TBPG_01577 [Mycobacterium tuberculosis W-148] gi|339295004|gb|AEJ47115.1| hypothetical protein CCDC5079_1925 [Mycobacterium tuberculosis CCDC5079] Length=721 Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 427 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 483 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 484 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 543 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 544 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 603 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 604 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 662 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 663 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 719 >gi|339632118|ref|YP_004723760.1| hypothetical protein MAF_20960 [Mycobacterium africanum GM041182] gi|339331474|emb|CCC27166.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=695 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 211/297 (72%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 401 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 457 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 458 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 517 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 518 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 577 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 578 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 636 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 637 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 693 >gi|289762244|ref|ZP_06521622.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709750|gb|EFD73766.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=324 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 173/297 (59%), Positives = 210/297 (71%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 30 YGADLRPPVTTPPATPPTPTEPFSGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 86 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 87 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 146 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 147 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 206 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 207 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 265 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 266 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 322 >gi|15609219|ref|NP_216598.1| hypothetical protein Rv2082 [Mycobacterium tuberculosis H37Rv] gi|148661898|ref|YP_001283421.1| hypothetical protein MRA_2098 [Mycobacterium tuberculosis H37Ra] gi|308232024|ref|ZP_07663972.1| hypothetical protein TMAG_02266 [Mycobacterium tuberculosis SUMu001] 6 more sequence titles Length=721 Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 172/297 (58%), Positives = 210/297 (71%), Gaps = 7/297 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 427 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 483 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 484 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 543 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 544 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 603 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LP IAQA+ + A R GV +NE +LLH Sbjct 604 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPPIAQAVVVAATRNYGVPDNETDLLH 662 Query 348 GCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAW--YAVTTRR 402 T + ++VL YP+H++ V DWMLLAAI ALI ANYHLAW A++TRR Sbjct 663 HKTTEIHQAVLTTYPNHDIATVVDWMLLAAINALIAGDQSGANYHLAWAIAAISTRR 719 >gi|333992294|ref|YP_004524908.1| hypothetical protein JDM601_3654 [Mycobacterium sp. JDM601] gi|333488262|gb|AEF37654.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=659 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 163/332 (50%), Positives = 200/332 (61%), Gaps = 14/332 (4%) Query 77 PVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAAPAVPS---VPTAPVSG 133 P A +TAGP + P+AP+ G A P+GPLP YG+DLRP AP P+ P+ P S Sbjct 328 PTAAPPMTAGPTSVPSAPISAGPAAPSGPLPGYGADLRPAGAVAPGAPTPAAGPSGPAS- 386 Query 134 APVAPSASSAPSAGGALVS-----PVERAASKAVAGQAGASSSTMAGASALSATAGATAG 188 P AP ++ P++G V+ PV + GQ+GAS +AG AGA AG Sbjct 387 -PSAPGGATTPTSGSTTVASSGDRPVPGKPTSGTGGQSGAS---IAGRMGAGGMAGAGAG 442 Query 189 AVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANV 248 + R AEQ +QR VDAVARQ P ++WAAGLRDD TTT+LVTDLAGGW+PP V LP V Sbjct 443 TAAKRMAEQDDVQRKVDAVARQAPNLAWAAGLRDDETTTVLVTDLAGGWVPPGVLLPPGV 502 Query 249 TLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFG 308 TLL P RR D V+DLLGAV+A A H+ NTYVAE GP+ P AR +DE G Sbjct 503 TLLAPAQRRHDVSVVDLLGAVIATATHQPNTYVAEAGPNDPLPGAGERARYGQ-HIDELG 561 Query 309 PTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTA 368 PTL++AV LPRI Q + R++GV +NE E +T VL AYP Sbjct 562 PTLIDAVGASTRLPRIVQTVGRAVARRSGVADNEIERFRNVVTDTANKVLSAYPDQLARD 621 Query 369 VGDWMLLAAIEALIDEQDYLANYHLAWYAVTT 400 V DWMLLAAI+ALID + LA YHLAW+ V T Sbjct 622 VADWMLLAAIDALIDGSEELARYHLAWHQVVT 653 >gi|254364895|ref|ZP_04980941.1| hypothetical protein TBHG_02040 [Mycobacterium tuberculosis str. Haarlem] gi|254551115|ref|ZP_05141562.1| hypothetical protein Mtube_11736 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289745358|ref|ZP_06504736.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] 12 more sequence titles Length=256 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 135/215 (63%), Positives = 161/215 (75%), Gaps = 3/215 (1%) Query 191 SARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTL 250 S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TTLLVTDLA GWIPPH+RLPA++TL Sbjct 42 SRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITL 101 Query 251 LEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPT 310 LEP RRR A V DLLG AAH + Y+++P PD PALTGDR+AR A P +DE GPT Sbjct 102 LEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIA-PTIDELGPT 160 Query 311 LVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVG 370 LVE VRR D+LPRIAQA+ + A R GV +NE +LLH T + ++VL YP+H++ V Sbjct 161 LVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLHHKTTEIHQAVLTTYPNHDIATVV 220 Query 371 DWMLLAAIEALIDEQDYLANYHLAW--YAVTTRRG 403 DWMLLAAI ALI ANYHLAW A++TRR Sbjct 221 DWMLLAAINALIAGDQSGANYHLAWAIAAISTRRS 255 >gi|289447703|ref|ZP_06437447.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289420661|gb|EFD17862.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=281 Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 151/262 (58%), Positives = 187/262 (72%), Gaps = 5/262 (1%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 21 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 77 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 78 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 137 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLA GWIPPH+RLPA++TLLEP RRR A V DLLG AAH + Y+++P PD Sbjct 138 LLVTDLASGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPD 197 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLH 347 PALTGDR+AR A P +DE GPTLVE VRR D+LPRIAQA+ + A R GV +NE +LLH Sbjct 198 TPALTGDRTARIA-PTIDELGPTLVETVRRHDTLPRIAQAVVVAATRNYGVPDNETDLLH 256 Query 348 GCITAVKESVLKAYPSHELTAV 369 T + ++VL YP+H++ V Sbjct 257 HKTTEIHQAVLTTYPNHDIATV 278 >gi|308406285|ref|ZP_07495813.2| hypothetical protein TMLG_00396 [Mycobacterium tuberculosis SUMu012] gi|308363888|gb|EFP52739.1| hypothetical protein TMLG_00396 [Mycobacterium tuberculosis SUMu012] Length=133 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 132/133 (99%), Positives = 133/133 (100%), Gaps = 0/133 (0%) Query 14 LSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDTPANTSGAPPASTG 73 +SEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDTPANTSGAPPASTG Sbjct 1 MSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDTPANTSGAPPASTG 60 Query 74 TTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAAPAVPSVPTAPVSG 133 TTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAAPAVPSVPTAPVSG Sbjct 61 TTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLRPPVVAAPAVPSVPTAPVSG 120 Query 134 APVAPSASSAPSA 146 APVAPSASSAPSA Sbjct 121 APVAPSASSAPSA 133 >gi|340627090|ref|YP_004745542.1| hypothetical protein MCAN_21031 [Mycobacterium canettii CIPT 140010059] gi|340005280|emb|CCC44435.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=657 Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 144/239 (61%), Positives = 176/239 (74%), Gaps = 5/239 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 422 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTTPATTQAQP 478 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 479 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 538 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLAGGWIPPH+RLPA++TLLEP RRR A V DLLGA AAH + Y+++P PD Sbjct 539 LLVTDLAGGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGATTVAAAHHPHGYLSQPDPD 598 Query 288 APALTGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELL 346 PALTGDR+AR A +++E GPTLVE VRRRD+LPRIAQA+ + A R GV +NE +LL Sbjct 599 TPALTGDRTARIAA-RIEELGPTLVETVRRRDTLPRIAQAVVVAATRNYGVPDNETDLL 656 >gi|333988704|ref|YP_004521318.1| hypothetical protein JDM601_0064 [Mycobacterium sp. JDM601] gi|333484672|gb|AEF34064.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=849 Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 149/307 (49%), Positives = 180/307 (59%), Gaps = 8/307 (2%) Query 104 GPLPAYGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGA--LVSPVERAA-SK 160 GPLP YG+DLRP AP VP+ + P A G + S +R+ + Sbjct 542 GPLPGYGADLRPATGTAPGVPAATAGAPAAPTSPPPGGPTTPASGGTTVASSSDRSTPGR 601 Query 161 AVAGQAGASSSTMAGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGL 220 G AG S + MAG A ATAGA AG + R AE Q LQR VDAVARQ P ++WAAGL Sbjct 602 PSPGPAGQSGAAMAGGMAAGATAGAGAGTAAKRLAEHQDLQRKVDAVARQAPNLAWAAGL 661 Query 221 RDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTY 280 RDD TTT++VTDLAGGWIPP V LP VTLLEP RR +DLLGAV+A A HE NTY Sbjct 662 RDDETTTVVVTDLAGGWIPPTVTLPPGVTLLEPAHRRSGTSAVDLLGAVIAAATHEPNTY 721 Query 281 VAEPGPDAPAL--TGDRSARSAIPKVDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGV 338 + E P P + TG+R+ VDE GPTL++ LPRI Q +A R++GV Sbjct 722 ITEADPHDPPVPGTGERARYGQ--HVDELGPTLIDVAGSSTRLPRIVQTVAQAMARRSGV 779 Query 339 LENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALIDEQDYLANYHLAWY-A 397 +NE +L + VL AYP H V DWMLLAA++ALID + LA YHLAW+ Sbjct 780 ADNEVDLFRQVVADTAARVLSAYPEHAPRDVADWMLLAAVDALIDGSEELARYHLAWHET 839 Query 398 VTTRRGG 404 V R GG Sbjct 840 VAVRHGG 846 >gi|167966573|ref|ZP_02548850.1| hypothetical protein MtubH3_00284 [Mycobacterium tuberculosis H37Ra] Length=206 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 104/161 (65%), Positives = 124/161 (78%), Gaps = 1/161 (0%) Query 191 SARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTL 250 S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TTLLVTDLA GWIPPH+RLPA++TL Sbjct 42 SRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTTLLVTDLASGWIPPHIRLPAHITL 101 Query 251 LEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKVDEFGPT 310 LEP RRR A V DLLG AAH + Y+++P PD PALTGDR+AR A P +DE GPT Sbjct 102 LEPAPRRRHATVTDLLGTTTVAAAHHPHGYLSQPDPDTPALTGDRTARIA-PTIDELGPT 160 Query 311 LVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCIT 351 LVE VRR D+LP IAQA+ + A R GV +++ +LLH T Sbjct 161 LVETVRRHDTLPPIAQAVVVAATRHYGVPDHDTDLLHHNTT 201 >gi|289748437|ref|ZP_06507815.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289689024|gb|EFD56453.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=247 Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 113/114 (99%), Positives = 113/114 (99%), Gaps = 0/114 (0%) Query 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT Sbjct 1 MVTGQPAAAGAHSLSEGAMTAMQSGSVPPPQATPPITTPPVVSAPTMAAGIEATHGPVDT 60 Query 61 PANTSGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLR 114 PANT GAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLR Sbjct 61 PANTPGAPPASTGTTGPVAPTVVTAGPVAAPAAPVVGGSAVPAGPLPAYGSDLR 114 >gi|340627091|ref|YP_004745543.1| hypothetical protein MCAN_21041 [Mycobacterium canettii CIPT 140010059] gi|340005281|emb|CCC44436.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=608 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 106/182 (59%), Positives = 130/182 (72%), Gaps = 4/182 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 423 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTTPATTQAQP 479 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 480 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 539 Query 228 LLVTDLAGGWIPPHVRLPANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPD 287 LLVTDLAGGWIPPH+RLPA++TLLEP RRR A V DLLGA AAH + Y+++P Sbjct 540 LLVTDLAGGWIPPHIRLPAHITLLEPAPRRRHATVTDLLGATTVAAAHHPHGYLSQPDRQ 599 Query 288 AP 289 +P Sbjct 600 SP 601 >gi|289750678|ref|ZP_06510056.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289691265|gb|EFD58694.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=722 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/145 (61%), Positives = 107/145 (74%), Gaps = 4/145 (2%) Query 109 YGSDLRPPVVAAPAVPSVPTAPVSGAPVAPSASSAPSAGGALVSPVERAASKAVAGQAGA 168 YG+DLRPPV PA P PT P+SGA V PS+ P+AGG+L+SPV ++ QA Sbjct 427 YGADLRPPVTTPPATPPTPTGPISGAAVTPSS---PAAGGSLMSPVVNKSTAPATTQAQP 483 Query 169 SSSTM-AGASALSATAGATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTT 227 S+ T ++ +AT GA AG S RAAEQQRL+RI+D VARQEP +SWAAGLRD+G TT Sbjct 484 SNPTPPLASATAAATTGAAAGDTSRRAAEQQRLRRILDTVARQEPGLSWAAGLRDNGQTT 543 Query 228 LLVTDLAGGWIPPHVRLPANVTLLE 252 LLVTDLA GWIPPH+RLPA++TLLE Sbjct 544 LLVTDLASGWIPPHIRLPAHITLLE 568 >gi|333988685|ref|YP_004521299.1| hypothetical protein JDM601_0045 [Mycobacterium sp. JDM601] gi|333484653|gb|AEF34045.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=496 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 84/206 (41%), Positives = 109/206 (53%), Gaps = 17/206 (8%) Query 197 QQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTAR 256 +QRLQR++ VARQEP + WA G DG T LLVTD+A GWIP + +PA V LLEP Sbjct 287 EQRLQRLLAFVARQEPGLRWAIGTFADGRT-LLVTDVANGWIPSGIEVPAGVHLLEPG-- 343 Query 257 RRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSA------IPKVDEFGPT 310 RR +LGA ES +Y PG D D A A + +D+ G Sbjct 344 RRSGTATAMLGAPA-----ESASY--SPG-DRLGWASDFGATDASVQPRELEPIDDLGWQ 395 Query 311 LVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVG 370 L EA RD LPR+A +A TGVL+ E +LL + ++ +L YP +LT V Sbjct 396 LSEATHWRDGLPRMANTLAKAGSAGTGVLDAEVDLLRVHLDTLRYQLLAQYPDTDLTLVL 455 Query 371 DWMLLAAIEALIDEQDYLANYHLAWY 396 + MLLAA E + ANYH +W+ Sbjct 456 NCMLLAATEGVATGDTVSANYHYSWF 481 >gi|118615961|ref|YP_904293.1| hypothetical protein MUL_0047 [Mycobacterium ulcerans Agy99] gi|118568071|gb|ABL02822.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=368 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/207 (37%), Positives = 112/207 (55%), Gaps = 16/207 (7%) Query 195 AEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPT 254 ++ QRL+R++ VARQEPR++WA G + +GT +LVTD+A GWIPP + LP V LL P Sbjct 168 SDDQRLRRLLMFVARQEPRLNWAIGRQSEGT--VLVTDVAHGWIPPGIALPQGVRLLPPK 225 Query 255 ARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAI-----PKVDEFGP 309 R G + A+ + + PG P + D + RS++ P D Sbjct 226 RRS---------GRLAALVDAATGSLSYSPGDPLPWVDEDTATRSSVRPRELPMADNVAR 276 Query 310 TLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAV 369 L +A R R LPR+A +A A T V+E+E +LL + + ++ YPS + + Sbjct 277 ELCDATRSRVGLPRMAHVLAKAADAGTAVVEDEIDLLRVHLDTARHQIVAHYPSIDGEVL 336 Query 370 GDWMLLAAIEALIDEQDYLANYHLAWY 396 +WMLLAA + ++ ANYHLAW+ Sbjct 337 LNWMLLAATASSVNGDAVTANYHLAWF 363 >gi|240172404|ref|ZP_04751063.1| hypothetical protein MkanA1_24018 [Mycobacterium kansasii ATCC 12478] Length=375 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 78/212 (37%), Positives = 112/212 (53%), Gaps = 5/212 (2%) Query 185 ATAGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRL 244 A A V+A ++ +RLQR++ VARQEPR++WA G R DG T +LVTDLA GW+PP + L Sbjct 164 APARGVAAPESDDERLQRLLTFVARQEPRLNWAVGQRADGLT-VLVTDLAHGWVPPGLML 222 Query 245 PANVTLLEPTARRRDADVIDLLGAVVAVAAHESNTYVAEPGPDAPALTGDRSARSAIPKV 304 P V LLEP +RR + L+G +A + ++ P + +P Sbjct 223 PEGVQLLEP--QRRSGGIAKLIGTTARLATYRPGDFLGWTSDFTPTTPSPKP--RELPTS 278 Query 305 DEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSH 364 D L R RD LPRI +A A GV E+E +LL + + +V+ YP+ Sbjct 279 DNLASELSGVTRWRDGLPRIVHLLAQAAAAGGGVGEDEIDLLRVHLDTARHAVVAQYPNV 338 Query 365 ELTAVGDWMLLAAIEALIDEQDYLANYHLAWY 396 + + + MLLAA E+ + ANYH AW+ Sbjct 339 DPALLLNCMLLAATESGVTGDPVSANYHFAWF 370 Lambda K H 0.312 0.126 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 819347350176 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40