BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3900c

Length=311
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15611036|ref|NP_218417.1|  hypothetical protein Rv3900c [Mycob...   619    2e-175
gi|15843531|ref|NP_338568.1|  hypothetical protein MT4017 [Mycoba...   618    5e-175
gi|289441341|ref|ZP_06431085.1|  conserved hypothetical alanine r...   617    7e-175
gi|31795073|ref|NP_857566.1|  hypothetical protein Mb3930c [Mycob...   617    7e-175
gi|289445500|ref|ZP_06435244.1|  conserved alanine rich protein [...   617    8e-175
gi|253800950|ref|YP_003033952.1|  hypothetical protein TBMG_03948...   616    2e-174
gi|339296706|gb|AEJ48817.1|  hypothetical protein CCDC5079_3628 [...   595    2e-168
gi|323717316|gb|EGB26521.1|  conserved alanine rich protein [Myco...   590    1e-166
gi|289756035|ref|ZP_06515413.1|  conserved hypothetical protein [...   380    2e-103
gi|340628870|ref|YP_004747322.1|  hypothetical protein MCAN_39201...   284    1e-74 
gi|289441343|ref|ZP_06431087.1|  conserved hypothetical protein [...   268    1e-69 
gi|41410424|ref|NP_963260.1|  hypothetical protein MAP4326c [Myco...   247    2e-63 
gi|254777637|ref|ZP_05219153.1|  hypothetical protein MaviaA2_236...   241    8e-62 
gi|296167167|ref|ZP_06849574.1|  conserved hypothetical protein [...   226    3e-57 
gi|340627094|ref|YP_004745546.1|  hypothetical protein MCAN_21071...   170    3e-40 
gi|340627090|ref|YP_004745542.1|  hypothetical protein MCAN_21031...   160    2e-37 
gi|289447704|ref|ZP_06437448.1|  conserved hypothetical protein [...   156    5e-36 
gi|308374488|ref|ZP_07667795.1|  hypothetical protein TMFG_01040 ...   155    6e-36 
gi|308375773|ref|ZP_07668106.1|  hypothetical protein TMGG_00638 ...   155    7e-36 
gi|289750678|ref|ZP_06510056.1|  LOW QUALITY PROTEIN: conserved h...   155    7e-36 
gi|15609219|ref|NP_216598.1|  hypothetical protein Rv2082 [Mycoba...   155    7e-36 
gi|148823298|ref|YP_001288052.1|  hypothetical protein TBFG_12119...   155    8e-36 
gi|121637967|ref|YP_978191.1|  hypothetical protein BCG_2101 [Myc...   155    1e-35 
gi|339632118|ref|YP_004723760.1|  hypothetical protein MAF_20960 ...   155    1e-35 
gi|289443588|ref|ZP_06433332.1|  conserved hypothetical protein [...   155    1e-35 
gi|31793265|ref|NP_855758.1|  hypothetical protein Mb2108 [Mycoba...   155    1e-35 
gi|289745357|ref|ZP_06504735.1|  hypothetical protein TBBG_00808 ...   155    1e-35 
gi|298525582|ref|ZP_07012991.1|  conserved hypothetical protein [...   154    1e-35 
gi|326903697|gb|EGE50630.1|  hypothetical protein TBPG_01577 [Myc...   154    1e-35 
gi|167967774|ref|ZP_02550051.1|  hypothetical protein MtubH3_0696...   154    2e-35 
gi|323719379|gb|EGB28518.1|  hypothetical protein TMMG_01358 [Myc...   154    2e-35 
gi|15841575|ref|NP_336612.1|  hypothetical protein MT2144 [Mycoba...   153    3e-35 
gi|340627091|ref|YP_004745543.1|  hypothetical protein MCAN_21041...   149    8e-34 
gi|183983065|ref|YP_001851356.1|  hypothetical protein MMAR_3066 ...   147    3e-33 
gi|333988704|ref|YP_004521318.1|  hypothetical protein JDM601_006...   104    2e-20 
gi|240173523|ref|ZP_04752181.1|  hypothetical protein MkanA1_2970...  99.4    7e-19 
gi|183983063|ref|YP_001851354.1|  hypothetical protein MMAR_3064 ...  98.2    2e-18 
gi|118617822|ref|YP_906154.1|  hypothetical protein MUL_2308 [Myc...  61.2    2e-07 
gi|320165138|gb|EFW42037.1|  hypothetical protein CAOG_07169 [Cap...  37.7    2.2   


>gi|15611036|ref|NP_218417.1| hypothetical protein Rv3900c [Mycobacterium tuberculosis H37Rv]
 gi|148663767|ref|YP_001285290.1| hypothetical protein MRA_3939 [Mycobacterium tuberculosis H37Ra]
 gi|148825108|ref|YP_001289862.1| hypothetical protein TBFG_13935 [Mycobacterium tuberculosis F11]
 31 more sequence titles
 
gi|167969435|ref|ZP_02551712.1| conserved alanine rich protein [Mycobacterium tuberculosis H37Ra]
 gi|254233385|ref|ZP_04926711.1| conserved hypothetical alanine rich protein [Mycobacterium tuberculosis 
C]
 gi|254366439|ref|ZP_04982483.1| conserved hypothetical alanine rich protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|289747744|ref|ZP_06507122.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289760072|ref|ZP_06519450.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298527372|ref|ZP_07014781.1| conserved alanine rich protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308232604|ref|ZP_07664128.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu001]
 gi|308369273|ref|ZP_07666707.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu002]
 gi|308371497|ref|ZP_07667183.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu003]
 gi|308371544|ref|ZP_07667198.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu004]
 gi|308376274|ref|ZP_07668236.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu008]
 gi|308378511|ref|ZP_07668774.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu009]
 gi|308379661|ref|ZP_07669015.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu010]
 gi|308380857|ref|ZP_07491261.2| conserved alanine rich protein [Mycobacterium tuberculosis SUMu011]
 gi|1944589|emb|CAB08101.1| CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN [Mycobacterium tuberculosis 
H37Rv]
 gi|124603178|gb|EAY61453.1| conserved hypothetical alanine rich protein [Mycobacterium tuberculosis 
C]
 gi|134151951|gb|EBA43996.1| conserved hypothetical alanine rich protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|148507919|gb|ABQ75728.1| conserved hypothetical alanine rich protein [Mycobacterium tuberculosis 
H37Ra]
 gi|148723635|gb|ABR08260.1| conserved alanine rich protein [Mycobacterium tuberculosis F11]
 gi|289688272|gb|EFD55760.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289715636|gb|EFD79648.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497166|gb|EFI32460.1| conserved alanine rich protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308213414|gb|EFO72813.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu001]
 gi|308328132|gb|EFP16983.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu002]
 gi|308328594|gb|EFP17445.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu003]
 gi|308336352|gb|EFP25203.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu004]
 gi|308351678|gb|EFP40529.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu008]
 gi|308352276|gb|EFP41127.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu009]
 gi|308356278|gb|EFP45129.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu010]
 gi|308360271|gb|EFP49122.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu011]
 gi|326905733|gb|EGE52666.1| conserved alanine rich protein [Mycobacterium tuberculosis W-148]
Length=311

 Score =  619 bits (1596),  Expect = 2e-175, Method: Compositional matrix adjust.
 Identities = 310/311 (99%), Positives = 311/311 (100%), Gaps = 0/311 (0%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG
Sbjct  1    MVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL
Sbjct  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120

Query  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180
            ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG
Sbjct  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180

Query  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240
            FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS
Sbjct  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240

Query  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300
            QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL
Sbjct  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300

Query  301  RRLGNRLRPGW  311
            RRLGNRLRPGW
Sbjct  301  RRLGNRLRPGW  311


>gi|15843531|ref|NP_338568.1| hypothetical protein MT4017 [Mycobacterium tuberculosis CDC1551]
 gi|13883907|gb|AAK48382.1| hypothetical protein MT4017 [Mycobacterium tuberculosis CDC1551]
Length=311

 Score =  618 bits (1593),  Expect = 5e-175, Method: Compositional matrix adjust.
 Identities = 309/311 (99%), Positives = 310/311 (99%), Gaps = 0/311 (0%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG
Sbjct  1    MVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL
Sbjct  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120

Query  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180
            ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG
Sbjct  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180

Query  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240
            FNVDDAPPPRLIRENDL ALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS
Sbjct  181  FNVDDAPPPRLIRENDLEALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240

Query  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300
            QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL
Sbjct  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300

Query  301  RRLGNRLRPGW  311
            RRLGNRLRPGW
Sbjct  301  RRLGNRLRPGW  311


>gi|289441341|ref|ZP_06431085.1| conserved hypothetical alanine rich protein [Mycobacterium tuberculosis 
T46]
 gi|289748438|ref|ZP_06507816.1| conserved alanine rich protein [Mycobacterium tuberculosis T92]
 gi|289414260|gb|EFD11500.1| conserved hypothetical alanine rich protein [Mycobacterium tuberculosis 
T46]
 gi|289689025|gb|EFD56454.1| conserved alanine rich protein [Mycobacterium tuberculosis T92]
Length=310

 Score =  617 bits (1591),  Expect = 7e-175, Method: Compositional matrix adjust.
 Identities = 309/310 (99%), Positives = 310/310 (100%), Gaps = 0/310 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +AADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR
Sbjct  1    MAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA
Sbjct  61   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
            SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF
Sbjct  121  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  180

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQ  241
            NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQ
Sbjct  181  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQ  240

Query  242  PAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLR  301
            PAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLR
Sbjct  241  PAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLR  300

Query  302  RLGNRLRPGW  311
            RLGNRLRPGW
Sbjct  301  RLGNRLRPGW  310


>gi|31795073|ref|NP_857566.1| hypothetical protein Mb3930c [Mycobacterium bovis AF2122/97]
 gi|121639811|ref|YP_980035.1| hypothetical protein BCG_3957c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224992306|ref|YP_002646996.1| hypothetical alanine rich protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 8 more sequence titles
 
gi|289572552|ref|ZP_06452779.1| conserved alanine rich protein [Mycobacterium tuberculosis K85]
 gi|339633890|ref|YP_004725532.1| hypothetical protein MAF_39150 [Mycobacterium africanum GM041182]
 gi|31620671|emb|CAD96116.1| CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN [Mycobacterium bovis 
AF2122/97]
 gi|121495459|emb|CAL73947.1| Conserved hypothetical alanine rich protein [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224775422|dbj|BAH28228.1| hypothetical alanine rich protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|289536983|gb|EFD41561.1| conserved alanine rich protein [Mycobacterium tuberculosis K85]
 gi|339333246|emb|CCC28983.1| conserved hypothetical alanine rich protein [Mycobacterium africanum 
GM041182]
 gi|341603832|emb|CCC66514.1| conserved hypothetical alanine rich protein [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=311

 Score =  617 bits (1591),  Expect = 7e-175, Method: Compositional matrix adjust.
 Identities = 309/311 (99%), Positives = 310/311 (99%), Gaps = 0/311 (0%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +VAADLPPGRWSAVLVG WWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG
Sbjct  1    MVAADLPPGRWSAVLVGAWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL
Sbjct  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120

Query  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180
            ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG
Sbjct  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180

Query  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240
            FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS
Sbjct  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240

Query  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300
            QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL
Sbjct  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300

Query  301  RRLGNRLRPGW  311
            RRLGNRLRPGW
Sbjct  301  RRLGNRLRPGW  311


>gi|289445500|ref|ZP_06435244.1| conserved alanine rich protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418458|gb|EFD15659.1| conserved alanine rich protein [Mycobacterium tuberculosis CPHL_A]
Length=311

 Score =  617 bits (1591),  Expect = 8e-175, Method: Compositional matrix adjust.
 Identities = 309/311 (99%), Positives = 310/311 (99%), Gaps = 0/311 (0%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLL RNQG
Sbjct  1    MVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLSRNQG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL
Sbjct  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120

Query  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180
            ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG
Sbjct  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180

Query  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240
            FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS
Sbjct  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240

Query  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300
            QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL
Sbjct  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300

Query  301  RRLGNRLRPGW  311
            RRLGNRLRPGW
Sbjct  301  RRLGNRLRPGW  311


>gi|253800950|ref|YP_003033952.1| hypothetical protein TBMG_03948 [Mycobacterium tuberculosis KZN 
1435]
 gi|289556168|ref|ZP_06445378.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN 
605]
 gi|253322454|gb|ACT27057.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289440800|gb|EFD23293.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN 
605]
 gi|328460678|gb|AEB06101.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN 
4207]
 gi|344221740|gb|AEN02371.1| hypothetical protein MTCTRI2_3979 [Mycobacterium tuberculosis 
CTRI-2]
Length=311

 Score =  616 bits (1588),  Expect = 2e-174, Method: Compositional matrix adjust.
 Identities = 309/311 (99%), Positives = 310/311 (99%), Gaps = 0/311 (0%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG
Sbjct  1    MVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL
Sbjct  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120

Query  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180
            ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG
Sbjct  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180

Query  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240
            FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS
Sbjct  181  FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS  240

Query  241  QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300
            QPAPRAIGASSRHASAGPV PAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL
Sbjct  241  QPAPRAIGASSRHASAGPVRPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL  300

Query  301  RRLGNRLRPGW  311
            RRLGNRLRPGW
Sbjct  301  RRLGNRLRPGW  311


>gi|339296706|gb|AEJ48817.1| hypothetical protein CCDC5079_3628 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339300298|gb|AEJ52408.1| hypothetical protein CCDC5180_3571 [Mycobacterium tuberculosis 
CCDC5180]
Length=298

 Score =  595 bits (1535),  Expect = 2e-168, Method: Compositional matrix adjust.
 Identities = 297/298 (99%), Positives = 298/298 (100%), Gaps = 0/298 (0%)

Query  14   VLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGRTAEDLIGRYLRG  73
            +LVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGRTAEDLIGRYLRG
Sbjct  1    MLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGRTAEDLIGRYLRG  60

Query  74   AKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASKKPLPEQLAEI  133
            AKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASKKPLPEQLAEI
Sbjct  61   AKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASKKPLPEQLAEI  120

Query  134  QAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNVDDAPPPRLIR  193
            QAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNVDDAPPPRLIR
Sbjct  121  QAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNVDDAPPPRLIR  180

Query  194  ENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQPAPRAIGASSRH  253
            ENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQPAPRAIGASSRH
Sbjct  181  ENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQPAPRAIGASSRH  240

Query  254  ASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLRRLGNRLRPGW  311
            ASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLRRLGNRLRPGW
Sbjct  241  ASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLRRLGNRLRPGW  298


>gi|323717316|gb|EGB26521.1| conserved alanine rich protein [Mycobacterium tuberculosis CDC1551A]
Length=296

 Score =  590 bits (1520),  Expect = 1e-166, Method: Compositional matrix adjust.
 Identities = 294/296 (99%), Positives = 295/296 (99%), Gaps = 0/296 (0%)

Query  16   VGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGRTAEDLIGRYLRGAK  75
            +GPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGRTAEDLIGRYLRGAK
Sbjct  1    MGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGRTAEDLIGRYLRGAK  60

Query  76   SEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASKKPLPEQLAEIQA  135
            SEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASKKPLPEQLAEIQA
Sbjct  61   SEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASKKPLPEQLAEIQA  120

Query  136  IQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNVDDAPPPRLIREN  195
            IQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNVDDAPPPRLIREN
Sbjct  121  IQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNVDDAPPPRLIREN  180

Query  196  DLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQPAPRAIGASSRHAS  255
            DL ALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQPAPRAIGASSRHAS
Sbjct  181  DLEALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACSQPAPRAIGASSRHAS  240

Query  256  AGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLRRLGNRLRPGW  311
            AGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLRRLGNRLRPGW
Sbjct  241  AGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRLRRLGNRLRPGW  296


>gi|289756035|ref|ZP_06515413.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289696622|gb|EFD64051.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=190

 Score =  380 bits (976),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 187/189 (99%), Positives = 189/189 (100%), Gaps = 0/189 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +AADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR
Sbjct  1    MAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA
Sbjct  61   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
            SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF
Sbjct  121  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  180

Query  182  NVDDAPPPR  190
            NVDDAPPP+
Sbjct  181  NVDDAPPPQ  189


>gi|340628870|ref|YP_004747322.1| hypothetical protein MCAN_39201 [Mycobacterium canettii CIPT 
140010059]
 gi|340007060|emb|CCC46251.1| putative uncharacterized protein [Mycobacterium canettii CIPT 
140010059]
Length=735

 Score =  284 bits (727),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 171/294 (59%), Positives = 200/294 (69%), Gaps = 17/294 (5%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +VA DLP G+W+  L+G WWP P  ALRAAA HWATW   KQELA +L  Q +LL RN+G
Sbjct  1    MVAGDLPAGKWTPALIGAWWPTPPTALRAAAHHWATWMTLKQELAESLRGQRELLSRNEG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTAEDLI RY +G KSE+ KAEKY++K  AFN+ ADAI YLRSRLT IA  GN+E+D+VL
Sbjct  61   RTAEDLISRYFQGEKSELDKAEKYKVKADAFNSGADAIHYLRSRLTEIADAGNREVDEVL  120

Query  121  ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG  180
            ASKK LPEQ+AEIQAIQ RCNADAANASR AVDK++ A QEILEAE  G D R+WAR +G
Sbjct  121  ASKKLLPEQVAEIQAIQARCNADAANASRAAVDKILAATQEILEAEGTGRDARSWAREHG  180

Query  181  FNVDDAPPPRLIRENDL----AALTGPGARGGSFGSVEGAGDLASP---QSVGAGGFSGS  233
            F++DD PPPR I ++DL    AA+   G RG       G G   +P   QSVG  G  G 
Sbjct  181  FDIDDVPPPRSISKDDLDSAPAAIGDRGMRGDGGVPSAGVGAEMTPEPGQSVGETGMRGD  240

Query  234  --------GVQAACSQPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATG  279
                    GV AA    AP  +  +    S GPVPPAPVVT+P AAT PVI  G
Sbjct  241  GGVWSSDGGVVAALPPAAP--VSDTGLRGSTGPVPPAPVVTSPPAATLPVIGGG  292


>gi|289441343|ref|ZP_06431087.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289567854|ref|ZP_06448081.1| predicted protein [Mycobacterium tuberculosis T17]
 gi|289414262|gb|EFD11502.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289541607|gb|EFD45256.1| predicted protein [Mycobacterium tuberculosis T17]
Length=172

 Score =  268 bits (684),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 141/150 (94%), Positives = 143/150 (96%), Gaps = 0/150 (0%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG
Sbjct  1    MVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL
Sbjct  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120

Query  121  ASKKPLPEQLAEIQAIQTRCNADAANASRD  150
            ASKKPLPEQLAEIQAIQ RCN   A   R+
Sbjct  121  ASKKPLPEQLAEIQAIQARCNTGVAWCKRE  150


>gi|41410424|ref|NP_963260.1| hypothetical protein MAP4326c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41399258|gb|AAS06876.1| hypothetical protein MAP_4326c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=719

 Score =  247 bits (630),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 134/240 (56%), Positives = 167/240 (70%), Gaps = 14/240 (5%)

Query  5    DLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLL-RNQGRTA  63
            DLPPG W+A L+GPWWPAPS ALRA AQHW+   +++Q  ++ L +Q  L    NQG TA
Sbjct  4    DLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTA  63

Query  64   EDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASK  123
            +DLI R+ +G K  +  AEKY+ K  AFN+AADA DYLRSRL+ IA  GN+EI+++LASK
Sbjct  64   DDLIDRFQQGEKFHLDLAEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASK  123

Query  124  KPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNV  183
            K  PE+LAEIQA+Q RCNADAANASRDAVDK+M A Q+IL+A+ +G D R+WARANGFN 
Sbjct  124  KLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQKILDADGVGGDARSWARANGFNT  183

Query  184  DDAPPPRLIRENDL-----AALTGPGARGG------SFGSVEGAGDLASPQSVGAGGFSG  232
             +AP P+ I   DL      + TGPG  GG      S GS +   +  SP  VGA GF G
Sbjct  184  QEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSN-GSP-GVGAAGFPG  241


>gi|254777637|ref|ZP_05219153.1| hypothetical protein MaviaA2_23611 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=330

 Score =  241 bits (616),  Expect = 8e-62, Method: Compositional matrix adjust.
 Identities = 117/194 (61%), Positives = 146/194 (76%), Gaps = 1/194 (0%)

Query  5    DLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLL-RNQGRTA  63
            DLPPG W+  L+GPWWPAPS ALRA AQHW+   +++Q  ++ L +Q  L    NQG TA
Sbjct  4    DLPPGTWTVALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTA  63

Query  64   EDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLASK  123
            +DLI R+ +G K  +  AEKY+ K  AFN+AADA DYLRSRL+ IA  GN+EI+++LASK
Sbjct  64   DDLIDRFQQGEKFHLDLAEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASK  123

Query  124  KPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFNV  183
            K  PE+LAEIQA+Q RCNADAANASRDAVDK+M A Q+IL+A+ +G D R+WARANGFN 
Sbjct  124  KLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQKILDADGVGGDARSWARANGFNT  183

Query  184  DDAPPPRLIRENDL  197
             DAP P+ I   DL
Sbjct  184  QDAPAPQQITAEDL  197


>gi|296167167|ref|ZP_06849574.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897489|gb|EFG77088.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=720

 Score =  226 bits (577),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 122/231 (53%), Positives = 156/231 (68%), Gaps = 8/231 (3%)

Query  4    ADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLL-RNQGRT  62
            ADLPPG+++A L+GPWW APS  LRA AQHW+    ++Q  ++NL +Q  ++   NQG T
Sbjct  3    ADLPPGKFTAALIGPWWSAPSTELRAGAQHWSQSCAEQQLFSQNLRNQWTVIAAHNQGHT  62

Query  63   AEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLAS  122
            A+DLI RY  G +  +  AEKY+ K GAFN+AADA DYLRSRL  IA  GN EID +LAS
Sbjct  63   ADDLISRYQDGERFHLDLAEKYQAKAGAFNSAADATDYLRSRLAEIAHTGNSEIDQILAS  122

Query  123  KKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFN  182
            K+PLP+++AE+QA+Q RCN DAANAS  AVDK+MTA Q+IL+ E  G D RTWAR NGFN
Sbjct  123  KEPLPQKVAEVQAVQLRCNGDAANASAAAVDKIMTATQKILDVEGHGGDARTWARENGFN  182

Query  183  VDDAPPPRLIRENDLAALTGP-------GARGGSFGSVEGAGDLASPQSVG  226
             D   PPR I  +DL    GP       G  G + G+     +L++P + G
Sbjct  183  TDSVQPPRSITGDDLKPGAGPSLAEPRMGGAGLNAGATHTDQNLSAPNAPG  233


>gi|340627094|ref|YP_004745546.1| hypothetical protein MCAN_21071 [Mycobacterium canettii CIPT 
140010059]
 gi|340005284|emb|CCC44439.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=717

 Score =  170 bits (431),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 95/221 (43%), Positives = 128/221 (58%), Gaps = 7/221 (3%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K++ A +L ++   L  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWREAAQLKRDEANDLRNERSRLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       AD  +YLR RLT IA  GN++ID +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEHVADTANYLRDRLTEIAQSGNQQIDQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
            SKKP+  ++  + A+  R N DAANA R A+  ++ A Q +L+ E IG D  TW R +G 
Sbjct  121  SKKPIEAKVTAVNAVIERSNIDAANAGRTAMSNIIDATQRVLD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASP  222
             +D  PP R +  +DL +L  P       GS  G   +A P
Sbjct  180  TLDTPPPSRPLTADDLDSLMSPA------GSTVGGASMAPP  214


>gi|340627090|ref|YP_004745542.1| hypothetical protein MCAN_21031 [Mycobacterium canettii CIPT 
140010059]
 gi|340005280|emb|CCC44435.1| putative uncharacterized protein [Mycobacterium canettii CIPT 
140010059]
Length=657

 Score =  160 bits (405),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 96/243 (40%), Positives = 133/243 (55%), Gaps = 3/243 (1%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++   L  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPAQPDAPMAGVTYWREAAQLKRNEANDLRNERSRLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       A+A+ ++R RLT IA  GN++ID +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVANAVHHVRDRLTEIAQSGNQQIDQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
            SKKP+  ++  + A+  R N DAANA R A+  ++ A Q +L+ E IG D  TW R +G 
Sbjct  121  SKKPIEAKVTAVNAVIERSNIDAANAGRTAMSNIIDATQRVLD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDL--AALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAAC  239
             +D    PR I   DL  +  + P    G   +      +  P +  AG   G+G   A 
Sbjct  180  TLDTPARPRPITAEDLNPSFQSAPAFGIGQVPAASAPDHVGVPPASPAGSALGAGQVPAT  239

Query  240  SQP  242
            S P
Sbjct  240  SAP  242


>gi|289447704|ref|ZP_06437448.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420662|gb|EFD17863.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=1033

 Score =  156 bits (394),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 128/224 (58%), Gaps = 2/224 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +AADLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++   L  NQGR
Sbjct  1    MAADLPPGRWSALLVGAWWPAQPDAPMAGVTYWRKAAQLKRNEANDLRNERSRLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + EIK       AD ++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEIKSDQSEQVADTVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALT-GPGARGGSFGSVEGAGDLASPQS  224
            ++D  PP R +  +DL + T G      +FGS + A    +P S
Sbjct  180  SLDTPPPSRPLTADDLTSPTAGSPPEAAAFGSGQPAPGATTPDS  223


>gi|308374488|ref|ZP_07667795.1| hypothetical protein TMFG_01040 [Mycobacterium tuberculosis SUMu006]
 gi|308341776|gb|EFP30627.1| hypothetical protein TMFG_01040 [Mycobacterium tuberculosis SUMu006]
Length=408

 Score =  155 bits (393),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDTPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|308375773|ref|ZP_07668106.1| hypothetical protein TMGG_00638 [Mycobacterium tuberculosis SUMu007]
 gi|308376906|ref|ZP_07668375.1| hypothetical protein TMHG_01270 [Mycobacterium tuberculosis SUMu008]
 gi|308377912|ref|ZP_07668619.1| hypothetical protein TMIG_00748 [Mycobacterium tuberculosis SUMu009]
 gi|308379115|ref|ZP_07668898.1| hypothetical protein TMJG_00341 [Mycobacterium tuberculosis SUMu010]
 gi|308345260|gb|EFP34111.1| hypothetical protein TMGG_00638 [Mycobacterium tuberculosis SUMu007]
 gi|308349561|gb|EFP38412.1| hypothetical protein TMHG_01270 [Mycobacterium tuberculosis SUMu008]
 gi|308354191|gb|EFP43042.1| hypothetical protein TMIG_00748 [Mycobacterium tuberculosis SUMu009]
 gi|308358144|gb|EFP46995.1| hypothetical protein TMJG_00341 [Mycobacterium tuberculosis SUMu010]
Length=434

 Score =  155 bits (392),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDTPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|289750678|ref|ZP_06510056.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium 
tuberculosis T92]
 gi|289691265|gb|EFD58694.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium 
tuberculosis T92]
Length=722

 Score =  155 bits (392),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|15609219|ref|NP_216598.1| hypothetical protein Rv2082 [Mycobacterium tuberculosis H37Rv]
 gi|148661898|ref|YP_001283421.1| hypothetical protein MRA_2098 [Mycobacterium tuberculosis H37Ra]
 gi|308232024|ref|ZP_07663972.1| hypothetical protein TMAG_02266 [Mycobacterium tuberculosis SUMu001]
 6 more sequence titles
 
gi|308403488|ref|ZP_07669429.1| hypothetical protein TMLG_03575 [Mycobacterium tuberculosis SUMu012]
 gi|1731338|sp|Q10690.1|Y2082_MYCTU RecName: Full=Uncharacterized protein Rv2082
 gi|1370248|emb|CAA98194.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148506050|gb|ABQ73859.1| hypothetical protein MRA_2098 [Mycobacterium tuberculosis H37Ra]
 gi|308215276|gb|EFO74675.1| hypothetical protein TMAG_02266 [Mycobacterium tuberculosis SUMu001]
 gi|308365709|gb|EFP54560.1| hypothetical protein TMLG_03575 [Mycobacterium tuberculosis SUMu012]
Length=721

 Score =  155 bits (392),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDTPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|148823298|ref|YP_001288052.1| hypothetical protein TBFG_12119 [Mycobacterium tuberculosis F11]
 gi|253798859|ref|YP_003031860.1| hypothetical protein TBMG_01899 [Mycobacterium tuberculosis KZN 
1435]
 gi|308370910|ref|ZP_07667042.1| hypothetical protein TMCG_00179 [Mycobacterium tuberculosis SUMu003]
 gi|148721825|gb|ABR06450.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253320362|gb|ACT24965.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|308330449|gb|EFP19300.1| hypothetical protein TMCG_00179 [Mycobacterium tuberculosis SUMu003]
 gi|328458617|gb|AEB04040.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|344219909|gb|AEN00540.1| hypothetical protein MTCTRI2_2121 [Mycobacterium tuberculosis 
CTRI-2]
Length=721

 Score =  155 bits (392),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDTPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|121637967|ref|YP_978191.1| hypothetical protein BCG_2101 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990461|ref|YP_002645148.1| hypothetical protein JTY_2095 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121493615|emb|CAL72089.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773574|dbj|BAH26380.1| hypothetical protein JTY_2095 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341602005|emb|CCC64679.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=695

 Score =  155 bits (391),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|339632118|ref|YP_004723760.1| hypothetical protein MAF_20960 [Mycobacterium africanum GM041182]
 gi|339331474|emb|CCC27166.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=695

 Score =  155 bits (391),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|289443588|ref|ZP_06433332.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289570195|ref|ZP_06450422.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574763|ref|ZP_06454990.1| predicted protein [Mycobacterium tuberculosis K85]
 gi|289754193|ref|ZP_06513571.1| hypothetical protein TBGG_01309 [Mycobacterium tuberculosis EAS054]
 gi|289416507|gb|EFD13747.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289539194|gb|EFD43772.1| predicted protein [Mycobacterium tuberculosis K85]
 gi|289543949|gb|EFD47597.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289694780|gb|EFD62209.1| hypothetical protein TBGG_01309 [Mycobacterium tuberculosis EAS054]
Length=721

 Score =  155 bits (391),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|31793265|ref|NP_855758.1| hypothetical protein Mb2108 [Mycobacterium bovis AF2122/97]
 gi|31618857|emb|CAD96961.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
Length=721

 Score =  155 bits (391),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|289745357|ref|ZP_06504735.1| hypothetical protein TBBG_00808 [Mycobacterium tuberculosis 02_1987]
 gi|289685885|gb|EFD53373.1| hypothetical protein TBBG_00808 [Mycobacterium tuberculosis 02_1987]
Length=435

 Score =  155 bits (391),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWREAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|298525582|ref|ZP_07012991.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298495376|gb|EFI30670.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=721

 Score =  154 bits (390),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWREAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|326903697|gb|EGE50630.1| hypothetical protein TBPG_01577 [Mycobacterium tuberculosis W-148]
 gi|339295004|gb|AEJ47115.1| hypothetical protein CCDC5079_1925 [Mycobacterium tuberculosis 
CCDC5079]
Length=721

 Score =  154 bits (390),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWREAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDAPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|167967774|ref|ZP_02550051.1| hypothetical protein MtubH3_06962 [Mycobacterium tuberculosis 
H37Ra]
Length=269

 Score =  154 bits (389),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 85/215 (40%), Positives = 123/215 (58%), Gaps = 1/215 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++  LL  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWRKAAQLKRNEANDLRNERSLLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       ADA++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEQVADAVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGA  216
            ++D    PR +   D+ ++T     G  FG+   A
Sbjct  180  SLDTPARPRPVTAEDMTSMTANSPAGSPFGAAPSA  214


>gi|323719379|gb|EGB28518.1| hypothetical protein TMMG_01358 [Mycobacterium tuberculosis CDC1551A]
Length=432

 Score =  154 bits (388),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 89/224 (40%), Positives = 127/224 (57%), Gaps = 2/224 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++   L  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPAQPDAPMAGVTYWRKAAQLKRNEANDLRNERSRLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + EIK       AD ++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEIKSDQSEQVADTVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALT-GPGARGGSFGSVEGAGDLASPQS  224
            ++D  PP R +  +DL + T G      +FGS + A    +P S
Sbjct  180  SLDTPPPSRPLTADDLTSPTAGSPPEAAAFGSGQPAPGATTPDS  223


>gi|15841575|ref|NP_336612.1| hypothetical protein MT2144 [Mycobacterium tuberculosis CDC1551]
 gi|13881823|gb|AAK46426.1| hypothetical protein MT2144 [Mycobacterium tuberculosis CDC1551]
Length=719

 Score =  153 bits (387),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 89/224 (40%), Positives = 127/224 (57%), Gaps = 2/224 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K+  A +L ++   L  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPAQPDAPMAGVTYWRKAAQLKRNEANDLRNERSRLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + EIK       AD ++YLR RLT IA  GN++I+ +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEIKSDQSEQVADTVNYLRDRLTEIAQSGNQQINQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K P+  ++A + A+  + NA A +    A+  ++ A Q + + E IG D  TW R +G 
Sbjct  121  GKGPIEAKVAAVNAVIEQSNAMADHVGATAMSNIIDATQRVFD-ETIGGDAHTWLRDHGV  179

Query  182  NVDDAPPPRLIRENDLAALT-GPGARGGSFGSVEGAGDLASPQS  224
            ++D  PP R +  +DL + T G      +FGS + A    +P S
Sbjct  180  SLDTPPPSRPLTADDLTSPTAGSPPEAAAFGSGQPAPGATTPDS  223


>gi|340627091|ref|YP_004745543.1| hypothetical protein MCAN_21041 [Mycobacterium canettii CIPT 
140010059]
 gi|340005281|emb|CCC44436.1| putative uncharacterized protein [Mycobacterium canettii CIPT 
140010059]
Length=608

 Score =  149 bits (375),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 100/262 (39%), Positives = 138/262 (53%), Gaps = 15/262 (5%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            +A DLPPGRWSA+LVG WWPA   A  A   +W   A  K++ A +L ++   L  NQGR
Sbjct  1    MAGDLPPGRWSALLVGAWWPARPDAPMAGVTYWREAAQLKRDEANDLRNERSRLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+ RY RG +   T A + E+K       AD ++YLR RLT IA  GN++ID +LA
Sbjct  61   TADDLLERYWRGEQRLATIAHQCEVKSDQSEHVADTVNYLRDRLTEIAQSGNQQIDQILA  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K  +  ++  + A+  + NA A +    A+  ++ A Q +L A  +G   R W R +G 
Sbjct  121  GKDSMEAKVTAVNAVIAQSNAMADHVRATAMSNIIDATQCVLSAT-VGGHARAWLRDHGV  179

Query  182  NVDDAPPPRLIREND----LAALTGPGA---RGGSFGSVE----GAGDLASPQSVGAGGF  230
            N+D  P PR I   D    LA+ T P     RGGS   +      AG  ASP   G  G 
Sbjct  180  NLDKPPRPRPITAEDLNLSLASSTAPAVGAPRGGSDAPLPDTGIAAGSPASPAVSGPRGV  239

Query  231  SGSGVQAA---CSQPAPRAIGA  249
            S + +  A      PA  A+G+
Sbjct  240  STASLSEAGIPAGPPASPAVGS  261


>gi|183983065|ref|YP_001851356.1| hypothetical protein MMAR_3066 [Mycobacterium marinum M]
 gi|183176391|gb|ACC41501.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=718

 Score =  147 bits (370),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 88/198 (45%), Positives = 117/198 (60%), Gaps = 1/198 (0%)

Query  2    VAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQGR  61
            + ADLPPGRWSA LVGPWWPAP  +  A   +W      KQ  AR+L  +   L  NQGR
Sbjct  1    MGADLPPGRWSAWLVGPWWPAPPGSPAAGVSYWRQAGEIKQNEARDLQIERSRLAVNQGR  60

Query  62   TAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLA  121
            TA+DL+GRY RG +S     E+ + K        DA++ LR RL  IA  GN EID +L+
Sbjct  61   TADDLMGRYWRGEQSLSATGEQCDTKSVQSGRVVDAVNNLRDRLRDIAHSGNGEIDRILS  120

Query  122  SKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGF  181
             K+P+   +A + A+  R N DAANA   A+  ++ A Q +L+   IG + RTW R +G 
Sbjct  121  EKRPIEAIVAAVNAVIARANTDAANAGAAAMSNIIDATQRVLDTT-IGGNARTWLREHGV  179

Query  182  NVDDAPPPRLIRENDLAA  199
            ++D+APP R I   DL A
Sbjct  180  DLDNAPPSRPITALDLNA  197


>gi|333988704|ref|YP_004521318.1| hypothetical protein JDM601_0064 [Mycobacterium sp. JDM601]
 gi|333484672|gb|AEF34064.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=849

 Score =  104 bits (259),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 67/195 (35%), Positives = 96/195 (50%), Gaps = 2/195 (1%)

Query  4    ADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLL-LRNQGRT  62
            +DLPPG WSA LVG  WP P          W+  A  K++ A  L          N G T
Sbjct  2    SDLPPGEWSAWLVGASWPEPPTQPTFGISFWSGHADIKEQEASELDKALTFFGQNNSGHT  61

Query  63   AEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVLAS  122
            A+D+I +   G K      +    K  A +  ADA++ LR RLT IA +GN+EI+ +L+ 
Sbjct  62   ADDMITKLRTGIKRLRKVRDDCRAKSAANSRVADAVNNLRDRLTEIARQGNQEINAILSR  121

Query  123  KKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANGFN  182
            +  L  +L EI  +    NA A  A  DA   ++TA Q +    D+ +D + W + +G N
Sbjct  122  QGSLESKLPEINRVIAEANALATGAGIDANTAIVTATQSMFNDMDVDEDAQKWLQDHGAN  181

Query  183  VDDAPPPRLIRENDL  197
                PP + I  +DL
Sbjct  182  F-GTPPRQHISADDL  195


>gi|240173523|ref|ZP_04752181.1| hypothetical protein MkanA1_29701 [Mycobacterium kansasii ATCC 
12478]
Length=330

 Score = 99.4 bits (246),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 97/180 (54%), Gaps = 2/180 (1%)

Query  41   KQELARNLISQHDLLLRNQGRTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDY  100
            K+  A +L +    L  NQGRTAEDL+GRY RG +   T A + E+K    +  ADA+++
Sbjct  7    KRNEASDLHNARSQLGVNQGRTAEDLLGRYWRGEQRLTTIASQCEVKSAQSDLVADAVNH  66

Query  101  LRSRLTGIAGEGNKEIDDVLASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQ  160
            LR +L+ IA  GN EI+ +L+ K  +  ++A +  +  + NA A+ A   A   ++ AMQ
Sbjct  67   LRDQLSEIARSGNDEIERILSDKGSIEAKVAAVNRVIEQSNARASCAGDIATSHIVDAMQ  126

Query  161  EILEAEDIGDDPRTWARANGFNVDDAPPPRLIRENDLA-ALTGPGARGGSFGSVEGAGDL  219
            ++L A   G D R W R +  N+D   P R +   DL  +L    +   +FG    A D+
Sbjct  127  KVLSAT-TGQDAREWLRDHDVNLDGPRPTRPLSVEDLKNSLASKSSETSAFGGDRPAPDM  185


>gi|183983063|ref|YP_001851354.1| hypothetical protein MMAR_3064 [Mycobacterium marinum M]
 gi|183176389|gb|ACC41499.1| conserved membrane protein [Mycobacterium marinum M]
Length=171

 Score = 98.2 bits (243),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 54/125 (44%), Positives = 71/125 (57%), Gaps = 0/125 (0%)

Query  1    VVAADLPPGRWSAVLVGPWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG  60
            +V ADLPPG+WSA LVG WWPA   A    A +W      K   AR+L  +   L  N+G
Sbjct  1    MVGADLPPGKWSAWLVGAWWPALPDAPATGATYWRGAGEIKHNEARDLQDERSRLTVNRG  60

Query  61   RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL  120
            RTA+DL+ RY RG +  +T  ++ + K        DA++ LR RL  IA  GN EID +L
Sbjct  61   RTADDLMDRYWRGEQRLLTIGDQCDTKSVQSGRVVDAVNNLRDRLRDIAHSGNDEIDRIL  120

Query  121  ASKKP  125
            + K P
Sbjct  121  SGKGP  125


>gi|118617822|ref|YP_906154.1| hypothetical protein MUL_2308 [Mycobacterium ulcerans Agy99]
 gi|118569932|gb|ABL04683.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=149

 Score = 61.2 bits (147),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 34/95 (36%), Positives = 49/95 (52%), Gaps = 0/95 (0%)

Query  31   AQHWATWAMQKQELARNLISQHDLLLRNQGRTAEDLIGRYLRGAKSEVTKAEKYEIKKGA  90
            A +W      K   AR+L ++   L  N+GRTA+DL+ RY RG +      ++ + K   
Sbjct  9    ATYWRGAGAIKHNEARDLQNERSQLAVNEGRTADDLMDRYWRGEQRLTAIGDQCDTKSVQ  68

Query  91   FNTAADAIDYLRSRLTGIAGEGNKEIDDVLASKKP  125
                 DA++ LR RL  IA  GN E D +L+ K P
Sbjct  69   SGRVVDAVNNLRDRLRDIAHSGNDETDRILSGKGP  103


>gi|320165138|gb|EFW42037.1| hypothetical protein CAOG_07169 [Capsaspora owczarzaki ATCC 30864]
Length=846

 Score = 37.7 bits (86),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 22/69 (32%), Positives = 37/69 (54%), Gaps = 1/69 (1%)

Query  46   RNLISQHDLLLRNQGRTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRL  105
            R L SQHDLLL+++   AE ++ ++LR  K +V   E+ E  K     A D    L++R+
Sbjct  498  RELASQHDLLLKSERERAE-MLEKHLRSLKPDVNFTEQLEALKQKSEAAHDIAVQLQARV  556

Query  106  TGIAGEGNK  114
              +  +  +
Sbjct  557  DELQADNQR  565



Lambda     K      H
   0.316    0.132    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 533708119992


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40