BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3907c Length=480 Score E Sequences producing significant alignments: (Bits) Value gi|15843539|ref|NP_338576.1| polyA polymerase [Mycobacterium tub... 962 0.0 gi|289756042|ref|ZP_06515420.1| polyA polymerase [Mycobacterium ... 960 0.0 gi|289441350|ref|ZP_06431094.1| tRNA adenylyltransferase [Mycoba... 901 0.0 gi|254233393|ref|ZP_04926719.1| poly(A) polymerase pcnA [Mycobac... 880 0.0 gi|183985441|ref|YP_001853732.1| poly(a) polymerase PcnA [Mycoba... 866 0.0 gi|118620062|ref|YP_908394.1| poly(a) polymerase PcnA [Mycobacte... 866 0.0 gi|240168387|ref|ZP_04747046.1| poly(a) polymerase PcnA [Mycobac... 852 0.0 gi|118465833|ref|YP_884405.1| tRNA adenylyltransferase [Mycobact... 850 0.0 gi|41410430|ref|NP_963266.1| PcnA [Mycobacterium avium subsp. pa... 848 0.0 gi|254777641|ref|ZP_05219157.1| PcnA [Mycobacterium avium subsp.... 847 0.0 gi|342862333|ref|ZP_08718974.1| PcnA [Mycobacterium colombiense ... 847 0.0 gi|254823068|ref|ZP_05228069.1| PcnA [Mycobacterium intracellula... 844 0.0 gi|296167162|ref|ZP_06849569.1| polyA polymerase [Mycobacterium ... 825 0.0 gi|15828457|ref|NP_302720.1| hypothetical protein ML2697 [Mycoba... 822 0.0 gi|333992971|ref|YP_004525585.1| poly(a) polymerase PcnA [Mycoba... 807 0.0 gi|118471508|ref|YP_891120.1| tRNA adenylyltransferase [Mycobact... 787 0.0 gi|126438336|ref|YP_001074027.1| metal dependent phosphohydrolas... 773 0.0 gi|119871509|ref|YP_941461.1| metal dependent phosphohydrolase [... 772 0.0 gi|289760079|ref|ZP_06519457.1| poly(A) polymerase [Mycobacteriu... 764 0.0 gi|289567863|ref|ZP_06448090.1| poly(A) polymerase pcnA [Mycobac... 761 0.0 gi|108802356|ref|YP_642553.1| metal dependent phosphohydrolase [... 760 0.0 gi|315446809|ref|YP_004079688.1| tRNA adenylyltransferase [Mycob... 755 0.0 gi|145221439|ref|YP_001132117.1| metal dependent phosphohydrolas... 755 0.0 gi|120406990|ref|YP_956819.1| metal dependent phosphohydrolase [... 754 0.0 gi|169632007|ref|YP_001705656.1| Poly(A) polymerase PcnA [Mycoba... 744 0.0 gi|111020630|ref|YP_703602.1| tRNA nucleotidyltransferase [Rhodo... 694 0.0 gi|226362873|ref|YP_002780653.1| tRNA nucleotidyltransferase [Rh... 690 0.0 gi|54027630|ref|YP_121872.1| putative tRNA nucleotidyltransferas... 686 0.0 gi|262204638|ref|YP_003275846.1| tRNA adenylyltransferase [Gordo... 684 0.0 gi|296141887|ref|YP_003649130.1| polynucleotide adenylyltransfer... 682 0.0 gi|312142006|ref|YP_004009342.1| polynucleotide adenylyltransfer... 680 0.0 gi|325677331|ref|ZP_08156996.1| polyA polymerase family protein ... 678 0.0 gi|229491197|ref|ZP_04385025.1| tRNA adenylyltransferase [Rhodoc... 676 0.0 gi|226309497|ref|YP_002769459.1| tRNA nucleotidyltransferase [Rh... 673 0.0 gi|343928710|ref|ZP_08768155.1| putative tRNA nucleotidyltransfe... 672 0.0 gi|333922219|ref|YP_004495800.1| putative tRNA nucleotidyltransf... 653 0.0 gi|326383888|ref|ZP_08205572.1| tRNA adenylyltransferase [Gordon... 642 0.0 gi|319948990|ref|ZP_08023091.1| polynucleotide adenylyltransfera... 641 0.0 gi|19554274|ref|NP_602276.1| putative polynucleotide polymerase ... 635 4e-180 gi|302531336|ref|ZP_07283678.1| tRNA adenylyltransferase [Strept... 633 3e-179 gi|145297078|ref|YP_001139899.1| hypothetical protein cgR_2974 [... 630 1e-178 gi|257057896|ref|YP_003135728.1| tRNA adenylyltransferase [Sacch... 629 2e-178 gi|886309|gb|AAB53125.1| polyA polymerase [Mycobacterium leprae] 629 3e-178 gi|300791145|ref|YP_003771436.1| poly(A) polymerase [Amycolatops... 629 3e-178 gi|38234901|ref|NP_940668.1| putative tRNA nucleotidyltransferas... 620 2e-175 gi|331700374|ref|YP_004336613.1| polynucleotide adenylyltransfer... 617 1e-174 gi|25029484|ref|NP_739538.1| putative tRNA nucleotidyltransferas... 617 1e-174 gi|21325858|dbj|BAC00479.1| tRNA nucleotidyltransferase/poly(A) ... 615 6e-174 gi|256381055|ref|YP_003104715.1| polynucleotide adenylyltransfer... 614 8e-174 gi|300859512|ref|YP_003784495.1| tRNA nucleotidyltransferase [Co... 613 2e-173 >gi|15843539|ref|NP_338576.1| polyA polymerase [Mycobacterium tuberculosis CDC1551] gi|31795080|ref|NP_857573.1| poly(A) polymerase PCNA (polynucleotide adenylyltransferase) (NTP polymerase) (RNA adenylating enzyme) (poly(A) polymerase) [Mycobacterium bovis AF2122/97] gi|57117168|ref|YP_178026.1| poly(A) polymerase [Mycobacterium tuberculosis H37Rv] 71 more sequence titles Length=480 Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/480 (99%), Positives = 480/480 (100%), Gaps = 0/480 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +PEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF Sbjct 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL Sbjct 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV Sbjct 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR Sbjct 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 >gi|289756042|ref|ZP_06515420.1| polyA polymerase [Mycobacterium tuberculosis EAS054] gi|289696629|gb|EFD64058.1| polyA polymerase [Mycobacterium tuberculosis EAS054] Length=480 Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/480 (99%), Positives = 479/480 (99%), Gaps = 0/480 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +PEAVQEADLLTAAAVALNRH ALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPEAVQEADLLTAAAVALNRHVALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF Sbjct 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL Sbjct 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV Sbjct 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR Sbjct 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 >gi|289441350|ref|ZP_06431094.1| tRNA adenylyltransferase [Mycobacterium tuberculosis T46] gi|289414269|gb|EFD11509.1| tRNA adenylyltransferase [Mycobacterium tuberculosis T46] Length=450 Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/450 (99%), Positives = 450/450 (100%), Gaps = 0/450 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +PEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF Sbjct 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL Sbjct 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV Sbjct 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRY 450 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRY Sbjct 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRY 450 >gi|254233393|ref|ZP_04926719.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis C] gi|124603186|gb|EAY61461.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis C] Length=514 Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/442 (99%), Positives = 441/442 (99%), Gaps = 0/442 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +PEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF Sbjct 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL Sbjct 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV Sbjct 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGP 442 DRVRPDLDGNQIMAVLDIP GP Sbjct 421 DRVRPDLDGNQIMAVLDIPGGP 442 >gi|183985441|ref|YP_001853732.1| poly(a) polymerase PcnA [Mycobacterium marinum M] gi|183178767|gb|ACC43877.1| poly(a) polymerase PcnA [Mycobacterium marinum M] Length=481 Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/480 (89%), Positives = 453/480 (95%), Gaps = 1/480 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRL-SPDLD 59 +PE VQ+ADLLTAAAVALNRHAA+L ELGS FA AGH+LYLVGGSVRDALLGRL SPDLD Sbjct 1 MPETVQDADLLTAAAVALNRHAAVLGELGSAFADAGHDLYLVGGSVRDALLGRLKSPDLD 60 Query 60 FTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVR 119 FTTDARP++VQ+IVR WADAVWDTGIEFGT+G+ K+D+R+EITTFRADSYD+VSRHPEVR Sbjct 61 FTTDARPQQVQKIVRSWADAVWDTGIEFGTIGIAKNDYRLEITTFRADSYDQVSRHPEVR 120 Query 120 FGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDP 179 FG+ LE DLVRRDFT NAMAVR+TA+GPGEFLDPLGGL+ LR KVLDTPAAPS SFGDDP Sbjct 121 FGERLEDDLVRRDFTVNAMAVRITASGPGEFLDPLGGLSVLRDKVLDTPAAPSVSFGDDP 180 Query 180 LRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLM 239 LRMLRAARFVSQLGFAVAPRVR AIEEMAPQLARISAERVAAELDKLL+GE+P AGIDLM Sbjct 181 LRMLRAARFVSQLGFAVAPRVRDAIEEMAPQLARISAERVAAELDKLLLGENPVAGIDLM 240 Query 240 VQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHD 299 V +GMG VVLPEIGGM+MAIDEHHQHKDVYQHSLTVLRQAI LEDDGPDLVLRWAALLHD Sbjct 241 VHTGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIELEDDGPDLVLRWAALLHD 300 Query 300 IGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD 359 IGKP TRRHE +GGVSFHHHEVVGAKMVRKRMRALKYSKQM+DD+SQLVYLHLRFHGYGD Sbjct 301 IGKPTTRRHEANGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDDVSQLVYLHLRFHGYGD 360 Query 360 GKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQED 419 GKWTDSAVRRYVTDAG LL RLHKLVRADCTTRNKRRAARLQASYDRLEERI ELAAQED Sbjct 361 GKWTDSAVRRYVTDAGPLLARLHKLVRADCTTRNKRRAARLQASYDRLEERITELAAQED 420 Query 420 LDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 LDRVRPDLDGNQIM +LDIPAGPQVGEAWRYLKELRLERGPL+ EEA ELLSWW+SRGN Sbjct 421 LDRVRPDLDGNQIMTLLDIPAGPQVGEAWRYLKELRLERGPLTIEEAKAELLSWWQSRGN 480 >gi|118620062|ref|YP_908394.1| poly(a) polymerase PcnA [Mycobacterium ulcerans Agy99] gi|118572172|gb|ABL06923.1| poly(a) polymerase PcnA [Mycobacterium ulcerans Agy99] Length=481 Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/480 (89%), Positives = 453/480 (95%), Gaps = 1/480 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRL-SPDLD 59 +PE VQ+ADLLTAAAVALNRHAA+LRELGS FA AGH+LYLVGGSVRDALLGRL SPDLD Sbjct 1 MPETVQDADLLTAAAVALNRHAAVLRELGSAFADAGHDLYLVGGSVRDALLGRLKSPDLD 60 Query 60 FTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVR 119 FTTDARP+++ +IVRPWADAVWDTGIEFGT+G+ K+D+R+EITTFRADSYD+VSRHPEVR Sbjct 61 FTTDARPQQILKIVRPWADAVWDTGIEFGTIGIAKNDYRLEITTFRADSYDQVSRHPEVR 120 Query 120 FGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDP 179 FG+ LE DLVRRDFT NAMAVR+TA+GPGEFLDPLGGL+ LR KVLDTPAAPS SFGDDP Sbjct 121 FGERLEDDLVRRDFTVNAMAVRITASGPGEFLDPLGGLSVLRDKVLDTPAAPSVSFGDDP 180 Query 180 LRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLM 239 LRMLRAARFVSQLGFAVAPRVR AIEEMAPQLARISAERVAAELDKLL+GEDP AGIDLM Sbjct 181 LRMLRAARFVSQLGFAVAPRVRDAIEEMAPQLARISAERVAAELDKLLLGEDPVAGIDLM 240 Query 240 VQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHD 299 V +GMG VVLPEIGGM+MAIDEHHQHKDVYQHSLTVLRQAI LED+GPDL LRWAALLHD Sbjct 241 VHTGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIELEDEGPDLALRWAALLHD 300 Query 300 IGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD 359 IGKPATRRHE +GGVSFHHHEVVGAKMVR RMRALKYSKQM+DD+SQLVYLHLRFHGYGD Sbjct 301 IGKPATRRHEANGGVSFHHHEVVGAKMVRNRMRALKYSKQMVDDVSQLVYLHLRFHGYGD 360 Query 360 GKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQED 419 GKWTDSAVRRYVTDAG LL RLHKLVRADCTTRNKRRAARLQ+SYDRLEERI ELAAQED Sbjct 361 GKWTDSAVRRYVTDAGPLLARLHKLVRADCTTRNKRRAARLQSSYDRLEERITELAAQED 420 Query 420 LDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 LDRVRPDLDGNQIM +LDIPAGPQVGEAWRYLKELRLERGPL+ EEA ELLSWW+SRGN Sbjct 421 LDRVRPDLDGNQIMTLLDIPAGPQVGEAWRYLKELRLERGPLTIEEAKAELLSWWRSRGN 480 >gi|240168387|ref|ZP_04747046.1| poly(a) polymerase PcnA [Mycobacterium kansasii ATCC 12478] Length=480 Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/479 (88%), Positives = 446/479 (94%), Gaps = 0/479 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P+ VQ+ADLLTAAAVALNRH A+LRELGS FA AGHELYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPDTVQDADLLTAAAVALNRHTAVLRELGSAFAEAGHELYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE+VQ++VR WADAVWDTGI+FGT+GVGK +R+EITTFRADSYD+VSRHPEV F Sbjct 61 TTDARPEQVQKLVRSWADAVWDTGIDFGTIGVGKDAYRLEITTFRADSYDQVSRHPEVSF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GD L DLVRRDFT NAMAVRVT GPGEFLDPLGGLA+LR KVLDTPA PS SFGDDPL Sbjct 121 GDRLHDDLVRRDFTVNAMAVRVTPNGPGEFLDPLGGLASLRDKVLDTPAPPSESFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRVR AIEEMAPQL RISAERV AELDKLL+G+DP AGIDLMV Sbjct 181 RMLRAARFVSQLGFTVAPRVRTAIEEMAPQLGRISAERVGAELDKLLLGDDPVAGIDLMV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 QSGMG VVLPE+GGMRMAIDEHHQHKDVYQHSLTVLRQA+ALED+ PDLVLRWAALLHDI Sbjct 241 QSGMGEVVLPEVGGMRMAIDEHHQHKDVYQHSLTVLRQAMALEDEEPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHE +GGVSFHHHEVVGAKMVRKRMRALKYSKQMIDD+SQLVYLHLRFHGYGD Sbjct 301 GKPATRRHEANGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDVSQLVYLHLRFHGYGDA 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAG LL RLHKLVRADCTTRN+RRAARLQ SYDRLE+RIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGPLLSRLHKLVRADCTTRNQRRAARLQVSYDRLEQRIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 RVRPDLDGNQIM +LDIPAGP VGEAWRYLKELRL+RGPLSTEEAT ELL+WW++RGN Sbjct 421 ARVRPDLDGNQIMRLLDIPAGPLVGEAWRYLKELRLDRGPLSTEEATAELLAWWETRGN 479 >gi|118465833|ref|YP_884405.1| tRNA adenylyltransferase [Mycobacterium avium 104] gi|118167120|gb|ABK68017.1| tRNA adenylyltransferase [Mycobacterium avium 104] Length=480 Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/479 (87%), Positives = 449/479 (94%), Gaps = 0/479 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P+A Q+A+LLTAAAVALN+HA +LRELGS F AAGH+LYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPDAAQDAELLTAAAVALNKHAPMLRELGSAFDAAGHQLYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARP++VQ+I+R WAD +WDTGIEFGTVGVGK D R+EITTFRAD+YD+VSR+P+VRF Sbjct 61 TTDARPDQVQQILRRWADNLWDTGIEFGTVGVGKGDRRLEITTFRADTYDQVSRNPQVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 G+ LE DLVRRDFTTNAMAVR+T GPGEFLDPLGGLAALR +VLDTPA P SFGDDPL Sbjct 121 GNRLEDDLVRRDFTTNAMAVRITPDGPGEFLDPLGGLAALRQRVLDTPATPEESFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRVR AIE MAPQLARISAERVAAELDKL++G+DP AGIDL+V Sbjct 181 RMLRAARFVSQLGFTVAPRVREAIERMAPQLARISAERVAAELDKLVLGDDPVAGIDLLV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 SGMG VVLPEIGGM+MAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 HSGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHEP+GGVSFHHHEVVGAKMVRKR+RALKYSKQM+DD+SQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEPNGGVSFHHHEVVGAKMVRKRLRALKYSKQMVDDVSQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAARLQASYDRLE RIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGPLLPRLHKLVRADCTTRNKRRAARLQASYDRLEARIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 RVRPDLDGNQIM +L IPAGPQVGEAWR+LKELRLERGPL +EAT ELLSWW+SRGN Sbjct 421 ARVRPDLDGNQIMEILGIPAGPQVGEAWRFLKELRLERGPLDPDEATAELLSWWRSRGN 479 >gi|41410430|ref|NP_963266.1| PcnA [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399264|gb|AAS06882.1| PcnA [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459797|gb|EGO38711.1| tRNA adenylyltransferase [Mycobacterium avium subsp. paratuberculosis S397] Length=480 Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/479 (87%), Positives = 447/479 (94%), Gaps = 0/479 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P+A Q+A+LLTAAAVALN+HA +LRELGS F AAGH+LYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPDAAQDAELLTAAAVALNKHAPMLRELGSAFDAAGHQLYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE+VQ+I+R WAD +WDTGIEFGTVGVGK D R+EITTFRAD+YD+VSR+P+VRF Sbjct 61 TTDARPEQVQQILRRWADNLWDTGIEFGTVGVGKGDRRLEITTFRADTYDQVSRNPQVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 G+ LE DLVRRDFT NAMAVR+T GPGEFLDPLGGLAALR +VLDTPA P SFGDDPL Sbjct 121 GNRLEDDLVRRDFTANAMAVRITPDGPGEFLDPLGGLAALRQRVLDTPATPEESFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRVR AIE MAPQLARISAERVAAELDKL++G+DP AGIDL+V Sbjct 181 RMLRAARFVSQLGFTVAPRVREAIERMAPQLARISAERVAAELDKLVLGDDPVAGIDLLV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 SGMG VVLPEIGGM+MAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 HSGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHEP+GGVSFHHHEVVGAKMVRKR+RALKYSKQMIDD+SQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEPNGGVSFHHHEVVGAKMVRKRLRALKYSKQMIDDVSQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAARL ASYDRLE RIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGPLLPRLHKLVRADCTTRNKRRAARLHASYDRLEARIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 RVRPDLDGNQIM +L IPAGPQVGEAWR+LKELRLERGPL +EAT ELLSWW+SRGN Sbjct 421 ARVRPDLDGNQIMEILGIPAGPQVGEAWRFLKELRLERGPLDPDEATAELLSWWRSRGN 479 >gi|254777641|ref|ZP_05219157.1| PcnA [Mycobacterium avium subsp. avium ATCC 25291] Length=480 Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/479 (87%), Positives = 448/479 (94%), Gaps = 0/479 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P+A Q+A+LLTAAAVALN+HA +LRELGS F AAGH+LYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPDAAQDAELLTAAAVALNKHAPMLRELGSAFDAAGHQLYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE+VQ+I+R WAD +WDTGIEFGTVGVGK D R+EITTFRAD+YD+VSR+P+VRF Sbjct 61 TTDARPEQVQQILRRWADNLWDTGIEFGTVGVGKGDRRLEITTFRADTYDQVSRNPQVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 G+ LE DLVRRDFT NAMAVR+T GPGEFLDPLGGLAALR +VLDTPA P SFGDDPL Sbjct 121 GNRLEDDLVRRDFTANAMAVRITPDGPGEFLDPLGGLAALRQRVLDTPATPEESFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRVR AIE MAPQLARISAERVAAELDKL++G+DP AGIDL+V Sbjct 181 RMLRAARFVSQLGFTVAPRVREAIERMAPQLARISAERVAAELDKLVLGDDPVAGIDLLV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 SGMG VVLPEIGGM+MAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 HSGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHEP+GGVSFHHHEVVGAKMVRKR+RAL+YSKQM+DD+SQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEPNGGVSFHHHEVVGAKMVRKRLRALRYSKQMVDDVSQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAARLQA+YDRLE RIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGPLLPRLHKLVRADCTTRNKRRAARLQAAYDRLEARIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 RVRPDLDGNQIM +L IPAGPQVGEAWR+LKELRLERGPL +EAT ELLSWW+SRGN Sbjct 421 ARVRPDLDGNQIMEILGIPAGPQVGEAWRFLKELRLERGPLDPDEATAELLSWWRSRGN 479 >gi|342862333|ref|ZP_08718974.1| PcnA [Mycobacterium colombiense CECT 3035] gi|342130190|gb|EGT83518.1| PcnA [Mycobacterium colombiense CECT 3035] Length=480 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/479 (87%), Positives = 448/479 (94%), Gaps = 0/479 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P+A Q+ADLLTAAAVALNRHA +L ELGS F AAGHELYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPDAAQDADLLTAAAVALNRHAPMLAELGSAFGAAGHELYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE+VQ+I+R WAD +WDTGIEFGTVGVGK DHR+EITTFRAD+YD+VSR+PEVRF Sbjct 61 TTDARPEQVQQILRRWADNLWDTGIEFGTVGVGKGDHRLEITTFRADTYDQVSRNPEVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GD L+ DLVRRDFT NAMAVR+T GPGEFLDPLGGLAALRA++LDTPAAP SFGDDPL Sbjct 121 GDRLDDDLVRRDFTANAMAVRITPAGPGEFLDPLGGLAALRARMLDTPAAPEVSFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRVR AIE MAPQL+RISAERVA ELDKL++G+DP AGIDL+V Sbjct 181 RMLRAARFVSQLGFTVAPRVREAIEHMAPQLSRISAERVATELDKLVLGDDPTAGIDLLV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Q+GMG VVLPE+GGM+MAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 QTGMGEVVLPEVGGMQMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHE +GGVSFHHHEVVGAKMVRKR+RALKYSKQMIDD+SQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEANGGVSFHHHEVVGAKMVRKRLRALKYSKQMIDDVSQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAARLQASYDRLE RIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGPLLPRLHKLVRADCTTRNKRRAARLQASYDRLEARIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 RVRPDLDGN+IM +L IP GPQVGEAWR+LKELRL+RGPL EEAT ELL+WW+SRGN Sbjct 421 ARVRPDLDGNRIMELLGIPPGPQVGEAWRFLKELRLDRGPLDDEEATAELLAWWQSRGN 479 >gi|254823068|ref|ZP_05228069.1| PcnA [Mycobacterium intracellulare ATCC 13950] Length=480 Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/479 (87%), Positives = 448/479 (94%), Gaps = 0/479 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P+A Q+A+LLTAAAVALNRHA +L ELGS F AGH+LYLVGGSVRDALLGRLSPDLDF Sbjct 1 MPDAAQDAELLTAAAVALNRHAPVLAELGSAFEGAGHQLYLVGGSVRDALLGRLSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE+VQ I+R WAD +WDTGI+FGTVGVGK DHR+EITTFRAD+YD+VSR+P+V++ Sbjct 61 TTDARPEQVQNILRRWADNLWDTGIQFGTVGVGKGDHRLEITTFRADTYDQVSRNPDVQY 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GD LE DLVRRDFT NAMAVR+T GPGEFLDPLGGLAALR +VLDTPAAP SFGDDPL Sbjct 121 GDRLEDDLVRRDFTANAMAVRITPEGPGEFLDPLGGLAALRERVLDTPAAPEVSFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRVRAAIE+MA QL RISAERVAAELDKL++G+DP AGIDL+V Sbjct 181 RMLRAARFVSQLGFTVAPRVRAAIEQMASQLGRISAERVAAELDKLVLGDDPTAGIDLLV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Q+GMG VVLPEIGGM+MAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI Sbjct 241 QTGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHE +GGVSFHHHEVVGAKMVRKR+RALKYSKQM++DISQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEANGGVSFHHHEVVGAKMVRKRLRALKYSKQMVEDISQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAARLQ+SYDRLE RIAELAAQEDL Sbjct 361 KWTDSAVRRYVTDAGPLLPRLHKLVRADCTTRNKRRAARLQSSYDRLETRIAELAAQEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 RVRPDLDGNQIM +L IPAGPQVGEAWR+LKELRLERGPL T+EAT ELL+WW+SRGN Sbjct 421 ARVRPDLDGNQIMELLGIPAGPQVGEAWRFLKELRLERGPLDTDEATAELLAWWRSRGN 479 >gi|296167162|ref|ZP_06849569.1| polyA polymerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897484|gb|EFG77083.1| polyA polymerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=478 Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/462 (88%), Positives = 433/462 (94%), Gaps = 0/462 (0%) Query 19 NRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPWAD 78 N+HA +LRELGS F AAGHELYLVGGSVRDA+LGRLSPDLDFTTDARPE+VQEI+R WAD Sbjct 17 NQHAPMLRELGSAFDAAGHELYLVGGSVRDAVLGRLSPDLDFTTDARPEQVQEILRRWAD 76 Query 79 AVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAM 138 +WDTGIEFGTVGVGK +R+EITTFRAD+YDRVSR PEV+FG+ LE DLVRRDFT NAM Sbjct 77 NLWDTGIEFGTVGVGKGGNRLEITTFRADAYDRVSRKPEVQFGERLEDDLVRRDFTANAM 136 Query 139 AVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAP 198 AVR+T GPGEFLDPLGGLAALR +VLDTPAAPS SFGDDPLRMLRAARFV+QLGFAVAP Sbjct 137 AVRITPEGPGEFLDPLGGLAALRQRVLDTPAAPSVSFGDDPLRMLRAARFVAQLGFAVAP 196 Query 199 RVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMA 258 RVR AIEEMAP+LARISAERVAAELDKLL+G+DP +GIDL+VQ+GMG VVLPE+GGM+MA Sbjct 197 RVREAIEEMAPELARISAERVAAELDKLLLGDDPVSGIDLLVQTGMGEVVLPEVGGMQMA 256 Query 259 IDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHH 318 IDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE +GGVSFHH Sbjct 257 IDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEANGGVSFHH 316 Query 319 HEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALL 378 HEVVGAKM RKR+RALKYSKQM+DD+SQLVYLHLRFHGYG+GKWTDSAVRRYVTDAG LL Sbjct 317 HEVVGAKMTRKRLRALKYSKQMVDDVSQLVYLHLRFHGYGEGKWTDSAVRRYVTDAGPLL 376 Query 379 PRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDI 438 PRLHKLVRADCTTRNKRRAARLQASYDRLE RI ELAAQEDL RVRPDLDGN IM +LDI Sbjct 377 PRLHKLVRADCTTRNKRRAARLQASYDRLEARIVELAAQEDLARVRPDLDGNAIMKLLDI 436 Query 439 PAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 PAGPQVGEAWR+LKELRLERGPL+ EEAT ELL WW+SRGNR Sbjct 437 PAGPQVGEAWRFLKELRLERGPLTAEEATAELLDWWRSRGNR 478 >gi|15828457|ref|NP_302720.1| hypothetical protein ML2697 [Mycobacterium leprae TN] gi|221230934|ref|YP_002504350.1| pcnA [Mycobacterium leprae Br4923] gi|13093887|emb|CAC32229.1| pcnA [Mycobacterium leprae] gi|219934041|emb|CAR72797.1| pcnA [Mycobacterium leprae Br4923] Length=486 Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/481 (84%), Positives = 443/481 (93%), Gaps = 1/481 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRL-SPDLD 59 VPEA Q+ DLLT AAV LNRH +LR+LGSVFAA+GHELYLVGGSVRDALLGRL SPDLD Sbjct 3 VPEAAQDTDLLTVAAVTLNRHTPVLRDLGSVFAASGHELYLVGGSVRDALLGRLDSPDLD 62 Query 60 FTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVR 119 F TDA PE+VQ+I+R WAD +W+TGIEFGT+GVGK D+R+EITTFRAD YD+VSR+PEVR Sbjct 63 FATDAGPEQVQQIMRRWADNLWETGIEFGTIGVGKGDYRLEITTFRADRYDQVSRNPEVR 122 Query 120 FGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDP 179 F D L+ DLVRRDFT NAMAVR+ + GPGEF DPLGGLAALR +VL+TPAAPS SFGDDP Sbjct 123 FSDRLDDDLVRRDFTVNAMAVRIASYGPGEFFDPLGGLAALRVRVLETPAAPSVSFGDDP 182 Query 180 LRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLM 239 LRMLRAARFVSQLGF VAP+V AAIEEMA QLARISAERV+ ELDKLL+G DPAAGIDL+ Sbjct 183 LRMLRAARFVSQLGFTVAPQVHAAIEEMASQLARISAERVSTELDKLLLGNDPAAGIDLL 242 Query 240 VQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHD 299 VQ+GMG VVLPEIG MRMAIDEHHQHKDVYQHSLTVLRQAIALED+GPDLVLRWAALLHD Sbjct 243 VQTGMGEVVLPEIGDMRMAIDEHHQHKDVYQHSLTVLRQAIALEDNGPDLVLRWAALLHD 302 Query 300 IGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD 359 IGKPATRRHE +GGVSFHHHEVVGAKMVRKRMRALKY+KQ++DD+SQLVYLHLRFHGYG+ Sbjct 303 IGKPATRRHELNGGVSFHHHEVVGAKMVRKRMRALKYAKQLVDDVSQLVYLHLRFHGYGE 362 Query 360 GKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQED 419 GKWTDSAVRRYVTDAG LL RLHKLVRADCTTRN+RRAARLQ SYDRLE RIAELAA+ED Sbjct 363 GKWTDSAVRRYVTDAGPLLSRLHKLVRADCTTRNQRRAARLQDSYDRLEARIAELAAEED 422 Query 420 LDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 L RVRPDLDGNQIMA+LDIPAGPQVGEAWR+LKELRL+RGPL+ EEAT ELL+WWK+R + Sbjct 423 LARVRPDLDGNQIMALLDIPAGPQVGEAWRFLKELRLDRGPLTNEEATAELLAWWKTRQS 482 Query 480 R 480 + Sbjct 483 Q 483 >gi|333992971|ref|YP_004525585.1| poly(a) polymerase PcnA [Mycobacterium sp. JDM601] gi|333488939|gb|AEF38331.1| poly(a) polymerase PcnA [Mycobacterium sp. JDM601] Length=482 Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/482 (84%), Positives = 436/482 (91%), Gaps = 2/482 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +PEA Q+ADLLTAAAVALNRHA LLR+LG++F AAGH+LYLVGGSVRDALLGR SPDLDF Sbjct 1 MPEAHQDADLLTAAAVALNRHAELLRDLGAMFDAAGHQLYLVGGSVRDALLGRSSPDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE+VQ+++R A+A+WDTGIEFGT+G G +R+EITTFRAD YDRVSR+PEVRF Sbjct 61 TTDARPEQVQQLLRGRAEALWDTGIEFGTIGAGLHGYRVEITTFRADKYDRVSRNPEVRF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GD L DLVRRDFT NAMAVR+T GPGEFLDPLGGLAALRA VLDTP AP SFGDDPL Sbjct 121 GDSLHEDLVRRDFTANAMAVRITGAGPGEFLDPLGGLAALRAGVLDTPTAPQDSFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRVRAAIEEMA QL+RI+ ERVAAELDKLL+G DPAAGI+LMV Sbjct 181 RMLRAARFVSQLGFTVAPRVRAAIEEMAEQLSRITPERVAAELDKLLLGADPAAGIELMV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALED--DGPDLVLRWAALLH 298 SGMG VVLPE+G MRMAIDEHHQHKDVYQHSLTVLRQAI LED GPDLVLRWAALLH Sbjct 241 ASGMGDVVLPEVGAMRMAIDEHHQHKDVYQHSLTVLRQAIELEDARGGPDLVLRWAALLH 300 Query 299 DIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYG 358 DIGKP TRRHEPDGGVSFHHHEVVGAKMVRKRMRAL+YSKQM+DD+SQLVYLHLRFHGYG Sbjct 301 DIGKPDTRRHEPDGGVSFHHHEVVGAKMVRKRMRALRYSKQMVDDVSQLVYLHLRFHGYG 360 Query 359 DGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQE 418 DGKWTDSAVRRYVTDAG LL RLHKLVRADCTTRNKRRAARLQA+YD+LE RI LA QE Sbjct 361 DGKWTDSAVRRYVTDAGPLLDRLHKLVRADCTTRNKRRAARLQANYDQLEARITALAEQE 420 Query 419 DLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 DL RVRPDLDGN+IMA+LDIPAGP VG AW +LKELRLERGPLS +EAT ELL+WW+++ Sbjct 421 DLQRVRPDLDGNEIMALLDIPAGPLVGRAWNFLKELRLERGPLSRDEATAELLAWWQTQR 480 Query 479 NR 480 NR Sbjct 481 NR 482 >gi|118471508|ref|YP_891120.1| tRNA adenylyltransferase [Mycobacterium smegmatis str. MC2 155] gi|118172795|gb|ABK73691.1| tRNA adenylyltransferase [Mycobacterium smegmatis str. MC2 155] Length=480 Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/465 (84%), Positives = 422/465 (91%), Gaps = 2/465 (0%) Query 16 VALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLS--PDLDFTTDARPERVQEIV 73 VALNR A +LRELG+VFAAAGHELYLVGGSVRDALLGRL+ DLDFTTDARPE++Q+ + Sbjct 16 VALNRRAGVLRELGAVFAAAGHELYLVGGSVRDALLGRLTENSDLDFTTDARPEQMQKFL 75 Query 74 RPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDF 133 R W+DA+WDTGIEFGT+GVGK D R+EITTFRADSYD+VSR+P V FGD L DLVRRDF Sbjct 76 RGWSDALWDTGIEFGTIGVGKGDDRLEITTFRADSYDQVSRNPTVEFGDNLGDDLVRRDF 135 Query 134 TTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLG 193 T NAMAVR+TA GPGEF DPLGGLAA R KVLDTP+AP SFGDDPLRMLRAARFVSQLG Sbjct 136 TINAMAVRITADGPGEFHDPLGGLAAARDKVLDTPSAPEVSFGDDPLRMLRAARFVSQLG 195 Query 194 FAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIG 253 F+VAPRV A+ EMAPQL RI+AERVAAELDKLL+G DP AGIDLMVQ+GMGAVVLPE+G Sbjct 196 FSVAPRVLEALIEMAPQLERITAERVAAELDKLLLGADPVAGIDLMVQTGMGAVVLPEVG 255 Query 254 GMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGG 313 MRMAIDEHHQHKDVY HSLTVLRQAI LEDDGPDLVLRWAALLHDIGKPATR+HEPDGG Sbjct 256 EMRMAIDEHHQHKDVYWHSLTVLRQAIDLEDDGPDLVLRWAALLHDIGKPATRKHEPDGG 315 Query 314 VSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTD 373 VSFHHHEVVGAKMVRKRMRALKYSKQM++D+SQLVYLHLRFHGYGDGKWTDSAVRRYVTD Sbjct 316 VSFHHHEVVGAKMVRKRMRALKYSKQMVEDVSQLVYLHLRFHGYGDGKWTDSAVRRYVTD 375 Query 374 AGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIM 433 AG LL RLHKLVRADCTTRNKRRAARL+A+YD LE RIAELAA+EDL RVRPDLDGN+IM Sbjct 376 AGPLLSRLHKLVRADCTTRNKRRAARLRANYDDLEARIAELAAKEDLQRVRPDLDGNEIM 435 Query 434 AVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 +L IP GPQVGEAW+YLKELRLERGPLS +EA ELL WW +RG Sbjct 436 QILGIPPGPQVGEAWKYLKELRLERGPLSHDEAVDELLKWWNARG 480 >gi|126438336|ref|YP_001074027.1| metal dependent phosphohydrolase [Mycobacterium sp. JLS] gi|126238136|gb|ABO01537.1| metal dependent phosphohydrolase [Mycobacterium sp. JLS] Length=489 Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/466 (83%), Positives = 416/466 (90%), Gaps = 5/466 (1%) Query 19 NRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPWAD 78 NR +LR++G+VFA AGH LYLVGGSVRDALLGRL DLDFTTDARPE++Q +RPWAD Sbjct 23 NRDGEVLRDIGAVFAEAGHTLYLVGGSVRDALLGRLGTDLDFTTDARPEQMQAFLRPWAD 82 Query 79 AVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAM 138 A+WDTGIEFGTVGVGK+ HRMEITTFRADSYD+VSR+P VR+GD LE DLVRRDFT NAM Sbjct 83 ALWDTGIEFGTVGVGKAGHRMEITTFRADSYDQVSRNPAVRYGDRLEDDLVRRDFTVNAM 142 Query 139 AVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAP 198 AV +TA GPGEF DPLGGLAALRAKVLDTP+AP SFGDDPLRMLRAARF SQLGF VAP Sbjct 143 AVAITAAGPGEFHDPLGGLAALRAKVLDTPSAPEVSFGDDPLRMLRAARFASQLGFGVAP 202 Query 199 RVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMA 258 RVR A+ EMAPQLARI+ ERVAAELDKLL+G DP GIDLMVQ+G+G VVLPE+GGMR+A Sbjct 203 RVRTAMTEMAPQLARITVERVAAELDKLLLGADPVTGIDLMVQTGLGDVVLPEVGGMRLA 262 Query 259 IDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHH 318 IDEHHQHKDVY HSLTVLRQAI LE DGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHH Sbjct 263 IDEHHQHKDVYWHSLTVLRQAIDLE-DGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHH 321 Query 319 HEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD----GKWTDSAVRRYVTDA 374 HEVVGAKM RKRMRALKYSKQM+DD+SQLV+LHLRFHGYGD GKWTDSAVRRYVTDA Sbjct 322 HEVVGAKMARKRMRALKYSKQMVDDVSQLVFLHLRFHGYGDAKGPGKWTDSAVRRYVTDA 381 Query 375 GALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMA 434 G LL RLHKLVRADCTTRNKRRAARLQA+YD LE RIAELAA+EDL RVRPDLDGN+IM Sbjct 382 GPLLDRLHKLVRADCTTRNKRRAARLQANYDDLERRIAELAAKEDLQRVRPDLDGNEIMR 441 Query 435 VLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 +LDIPAGPQVGEAWR+LKELRLERGPLS +EA ELL WW + R Sbjct 442 LLDIPAGPQVGEAWRHLKELRLERGPLSHDEAVDELLKWWNAEPRR 487 >gi|119871509|ref|YP_941461.1| metal dependent phosphohydrolase [Mycobacterium sp. KMS] gi|119697598|gb|ABL94671.1| metal dependent phosphohydrolase [Mycobacterium sp. KMS] Length=489 Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/466 (83%), Positives = 416/466 (90%), Gaps = 5/466 (1%) Query 19 NRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPWAD 78 NR +LR++G+VFA AGH LYLVGGSVRDALLGRL DLDFTTDARPE++Q +RPWAD Sbjct 23 NRDGEVLRDIGAVFAEAGHTLYLVGGSVRDALLGRLGTDLDFTTDARPEQMQAFLRPWAD 82 Query 79 AVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAM 138 A+WDTGIEFGTVGVGK+ HRMEITTFRADSYD+VSR+P VR+GD LE DLVRRDFT NAM Sbjct 83 ALWDTGIEFGTVGVGKAGHRMEITTFRADSYDQVSRNPAVRYGDRLEDDLVRRDFTVNAM 142 Query 139 AVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAP 198 AV +TA GPGEF DPLGGLAALRAKVLDTP+AP SFGDDPLRMLRAARF SQLGF VAP Sbjct 143 AVAITAAGPGEFHDPLGGLAALRAKVLDTPSAPEVSFGDDPLRMLRAARFASQLGFGVAP 202 Query 199 RVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMA 258 RVR A+ EMAPQL+RI+ ERVAAELDKLL+G DP GIDLMVQ+G+G VVLPE+GGMR+A Sbjct 203 RVRTAMTEMAPQLSRITVERVAAELDKLLLGADPVTGIDLMVQTGLGDVVLPEVGGMRLA 262 Query 259 IDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHH 318 IDEHHQHKDVY HSLTVLRQAI LE DGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHH Sbjct 263 IDEHHQHKDVYWHSLTVLRQAIDLE-DGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHH 321 Query 319 HEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD----GKWTDSAVRRYVTDA 374 HEVVGAKM RKRMRALKYSKQM+DD+SQLV+LHLRFHGYGD GKWTDSAVRRYVTDA Sbjct 322 HEVVGAKMARKRMRALKYSKQMVDDVSQLVFLHLRFHGYGDAKGPGKWTDSAVRRYVTDA 381 Query 375 GALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMA 434 G LL RLHKLVRADCTTRNKRRAARLQA+YD LE RIAELAA+EDL RVRPDLDGN+IM Sbjct 382 GPLLDRLHKLVRADCTTRNKRRAARLQANYDDLERRIAELAAKEDLQRVRPDLDGNEIMR 441 Query 435 VLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 +LDIPAGPQVGEAWR+LKELRLERGPLS +EA ELL WW + R Sbjct 442 LLDIPAGPQVGEAWRHLKELRLERGPLSHDEAVDELLKWWNAEPRR 487 >gi|289760079|ref|ZP_06519457.1| poly(A) polymerase [Mycobacterium tuberculosis T85] gi|289715643|gb|EFD79655.1| poly(A) polymerase [Mycobacterium tuberculosis T85] Length=398 Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/379 (100%), Positives = 379/379 (100%), Gaps = 0/379 (0%) Query 102 TTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALR 161 TTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALR Sbjct 20 TTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALR 79 Query 162 AKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAA 221 AKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAA Sbjct 80 AKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAA 139 Query 222 ELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIA 281 ELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIA Sbjct 140 ELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIA 199 Query 282 LEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMI 341 LEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMI Sbjct 200 LEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMI 259 Query 342 DDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQ 401 DDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQ Sbjct 260 DDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQ 319 Query 402 ASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPL 461 ASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPL Sbjct 320 ASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPL 379 Query 462 STEEATTELLSWWKSRGNR 480 STEEATTELLSWWKSRGNR Sbjct 380 STEEATTELLSWWKSRGNR 398 >gi|289567863|ref|ZP_06448090.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis T17] gi|289541616|gb|EFD45265.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis T17] Length=396 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/396 (96%), Positives = 383/396 (97%), Gaps = 0/396 (0%) Query 85 IEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTA 144 +EFGT ++ RADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTA Sbjct 1 MEFGTSAWVRATTAWRSPHSRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTA 60 Query 145 TGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAI 204 TGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAI Sbjct 61 TGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAI 120 Query 205 EEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQ 264 EEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQ Sbjct 121 EEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQ 180 Query 265 HKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGA 324 HKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGA Sbjct 181 HKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGA 240 Query 325 KMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHKL 384 KMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHKL Sbjct 241 KMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHKL 300 Query 385 VRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQV 444 VRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQV Sbjct 301 VRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQV 360 Query 445 GEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 GEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR Sbjct 361 GEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 396 >gi|108802356|ref|YP_642553.1| metal dependent phosphohydrolase [Mycobacterium sp. MCS] gi|108772775|gb|ABG11497.1| metal dependent phosphohydrolase [Mycobacterium sp. MCS] Length=455 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/454 (84%), Positives = 407/454 (90%), Gaps = 5/454 (1%) Query 31 VFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPWADAVWDTGIEFGTV 90 +FA AGH LYLVGGSVRDALLGRL DLDFTTDARPE++Q +RPWADA+WDTGIEFGTV Sbjct 1 MFAEAGHTLYLVGGSVRDALLGRLGTDLDFTTDARPEQMQAFLRPWADALWDTGIEFGTV 60 Query 91 GVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEF 150 GVGK+ HRMEITTFRADSYD+VSR+P VR+GD LE DLVRRDFT NAMAV +TA GPGEF Sbjct 61 GVGKAGHRMEITTFRADSYDQVSRNPAVRYGDRLEDDLVRRDFTVNAMAVAITAAGPGEF 120 Query 151 LDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQ 210 DPLGGLAALRAKVLDTP+AP SFGDDPLRMLRAARF SQLGF VAPRVR A+ EMAPQ Sbjct 121 HDPLGGLAALRAKVLDTPSAPEVSFGDDPLRMLRAARFASQLGFGVAPRVRTAMTEMAPQ 180 Query 211 LARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQ 270 L+RI+ ERVAAELDKLL+G DP GIDLMVQ+G+G VVLPE+GGMR+AIDEHHQHKDVY Sbjct 181 LSRITVERVAAELDKLLLGADPVTGIDLMVQTGLGDVVLPEVGGMRLAIDEHHQHKDVYW 240 Query 271 HSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKR 330 HSLTVLRQAI LE DGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKM RKR Sbjct 241 HSLTVLRQAIDLE-DGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMARKR 299 Query 331 MRALKYSKQMIDDISQLVYLHLRFHGYGD----GKWTDSAVRRYVTDAGALLPRLHKLVR 386 MRALKYSKQM+DD+SQLV+LHLRFHGYGD GKWTDSAVRRYVTDAG LL RLHKLVR Sbjct 300 MRALKYSKQMVDDVSQLVFLHLRFHGYGDAKGPGKWTDSAVRRYVTDAGPLLDRLHKLVR 359 Query 387 ADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQVGE 446 ADCTTRNKRRAARLQA+YD LE RIAELAA+EDL RVRPDLDGN+IM +LDIPAGPQVGE Sbjct 360 ADCTTRNKRRAARLQANYDDLERRIAELAAKEDLQRVRPDLDGNEIMRLLDIPAGPQVGE 419 Query 447 AWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 AWR+LKELRLERGPLS +EA ELL WW + R Sbjct 420 AWRHLKELRLERGPLSHDEAVDELLKWWNAEPRR 453 >gi|315446809|ref|YP_004079688.1| tRNA adenylyltransferase [Mycobacterium sp. Spyr1] gi|315265112|gb|ADU01854.1| tRNA adenylyltransferase [Mycobacterium sp. Spyr1] Length=486 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/482 (78%), Positives = 416/482 (87%), Gaps = 4/482 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPD--- 57 + + + +A+ L A VALNR +LR+LG VFA GHELYLVGG VRDALLGR PD Sbjct 1 MSDPISDAERLATAQVALNRRGDVLRDLGRVFADNGHELYLVGGPVRDALLGRFDPDKND 60 Query 58 LDFTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPE 117 LDFTTDARPE++Q ++R W DA+WDTGIEFGT+GVGK + R+EITTFRAD+YD+VSR+PE Sbjct 61 LDFTTDARPEQMQRVLRGWGDALWDTGIEFGTLGVGKGEDRLEITTFRADTYDKVSRNPE 120 Query 118 VRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGD 177 VRFGD L DLVRRDFT NAMAVRVTA GP EFLDPL GL+ALR VLDTPAAP SFGD Sbjct 121 VRFGDNLADDLVRRDFTVNAMAVRVTADGPTEFLDPLDGLSALRDGVLDTPAAPEVSFGD 180 Query 178 DPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGID 237 DPLRMLRAARFVSQLGF VAPRVR A+EEM+ QL+RI+AERVAAELDKLL+G DP AG+D Sbjct 181 DPLRMLRAARFVSQLGFTVAPRVRRALEEMSSQLSRITAERVAAELDKLLLGADPVAGLD 240 Query 238 LMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALED-DGPDLVLRWAAL 296 LMV +G+G VVLPE+G MRMAIDEHHQHKDVYQHSLTVLRQA+ LE DGPDLVLRWAAL Sbjct 241 LMVDTGLGEVVLPEVGAMRMAIDEHHQHKDVYQHSLTVLRQAMDLEGADGPDLVLRWAAL 300 Query 297 LHDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHG 356 LHDIGKPATRRHEPDGGVSFHHHEVVGAKM RKRMR LKYSKQMI D+SQLVYLHLRFHG Sbjct 301 LHDIGKPATRRHEPDGGVSFHHHEVVGAKMTRKRMRELKYSKQMISDVSQLVYLHLRFHG 360 Query 357 YGDGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAA 416 YGDG+WTDSAVRRYVTDAG LL RLHKLVRADCTTRNKRRAARLQA+YD LE RI +LAA Sbjct 361 YGDGRWTDSAVRRYVTDAGPLLTRLHKLVRADCTTRNKRRAARLQANYDDLERRIQDLAA 420 Query 417 QEDLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKS 476 +EDL RVRPD+DGN+IM +L IP GPQVG+AW +LKELRL+RGPL +EA EL+ WW Sbjct 421 REDLARVRPDIDGNEIMKILGIPPGPQVGQAWNHLKELRLDRGPLDHDEAVEELVRWWNE 480 Query 477 RG 478 RG Sbjct 481 RG 482 >gi|145221439|ref|YP_001132117.1| metal dependent phosphohydrolase [Mycobacterium gilvum PYR-GCK] gi|145213925|gb|ABP43329.1| metal dependent phosphohydrolase [Mycobacterium gilvum PYR-GCK] Length=497 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/482 (78%), Positives = 415/482 (87%), Gaps = 4/482 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPD--- 57 V + + +A+ L A VALNR +LR+LG VFA GHELYLVGG VRDALLGR PD Sbjct 12 VSDPISDAERLATAQVALNRRGDVLRDLGRVFADNGHELYLVGGPVRDALLGRFDPDKND 71 Query 58 LDFTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPE 117 LDFTTDARPE++Q +R W DA+WDTGIEFGT+GVGK + R+EITTFRAD+YD+VSR+PE Sbjct 72 LDFTTDARPEQMQRFLRGWGDALWDTGIEFGTLGVGKGEDRLEITTFRADTYDKVSRNPE 131 Query 118 VRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGD 177 VRFGD L DLVRRDFT NAMAVRVTA GP EFLDPL GL+ALR VLDTPAAP SFGD Sbjct 132 VRFGDNLADDLVRRDFTVNAMAVRVTADGPTEFLDPLDGLSALRDGVLDTPAAPEVSFGD 191 Query 178 DPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGID 237 DPLRMLRAARFVSQLGF VAPRVR A+EEM+ QL+RI+AERVAAELDKLL+G DP AG+D Sbjct 192 DPLRMLRAARFVSQLGFTVAPRVRRALEEMSSQLSRITAERVAAELDKLLLGADPVAGLD 251 Query 238 LMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALED-DGPDLVLRWAAL 296 LMV +G+G VVLPE+G MRMAIDEHHQHKDVYQHSLTVLRQA+ LE DGPDLVLRWAAL Sbjct 252 LMVDTGLGEVVLPEVGAMRMAIDEHHQHKDVYQHSLTVLRQAMDLEGADGPDLVLRWAAL 311 Query 297 LHDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHG 356 LHDIGKPATRRHEPDGGVSFHHHEVVGAKM RKRMR LKYSKQMI D+SQLVYLHLRFHG Sbjct 312 LHDIGKPATRRHEPDGGVSFHHHEVVGAKMTRKRMRELKYSKQMISDVSQLVYLHLRFHG 371 Query 357 YGDGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAA 416 YGDG+WTDSAVRRYVTDAG LL RLHKLVRADCTTRNKRRAARLQA+YD LE RI +LAA Sbjct 372 YGDGRWTDSAVRRYVTDAGPLLTRLHKLVRADCTTRNKRRAARLQANYDDLERRIQDLAA 431 Query 417 QEDLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKS 476 +EDL RVRPD+DGN+IM +L IP GPQVG+AW +LKELRL+RGPL +EA EL+ WW Sbjct 432 REDLARVRPDIDGNEIMKILGIPPGPQVGQAWNHLKELRLDRGPLDHDEAVEELVRWWNE 491 Query 477 RG 478 RG Sbjct 492 RG 493 >gi|120406990|ref|YP_956819.1| metal dependent phosphohydrolase [Mycobacterium vanbaalenii PYR-1] gi|119959808|gb|ABM16813.1| metal dependent phosphohydrolase [Mycobacterium vanbaalenii PYR-1] Length=483 Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/479 (78%), Positives = 416/479 (87%), Gaps = 1/479 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P+ +++LL AA VALN H +LRELG +F GH+LYLVGGSVRDALLGRL DLDF Sbjct 1 MPDPTSDSELLAAAQVALNVHGGVLRELGRLFGDHGHQLYLVGGSVRDALLGRLGTDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARP+++ +R W DA+WDTGI+FGT+GV K R+EITTFRADSYD+VSRHPEVR+ Sbjct 61 TTDARPDQMLPFLRGWGDALWDTGIDFGTLGVAKGGDRLEITTFRADSYDQVSRHPEVRY 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GD L DLVRRDFT NAMAVR+T GP EFLDPL GLAALR +VLDTP+ P SF DDPL Sbjct 121 GDNLADDLVRRDFTVNAMAVRITPGGPTEFLDPLDGLAALRDQVLDTPSEPEVSFSDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGFAVAPRVR A++EMAPQL+RI+AERVAAELDKLL+G DP AG++LMV Sbjct 181 RMLRAARFVSQLGFAVAPRVRRALQEMAPQLSRITAERVAAELDKLLLGADPVAGLNLMV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALED-DGPDLVLRWAALLHD 299 ++G+G VVLPEIG MRMAIDEHHQHKDVYQHSLTVLRQA+ LE +GPDLVLRWAALLHD Sbjct 241 ETGLGDVVLPEIGAMRMAIDEHHQHKDVYQHSLTVLRQAMDLEGPEGPDLVLRWAALLHD 300 Query 300 IGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD 359 IGKPATRRHEPDGGVSFHHHEVVGAKM RKR+R LKYSKQMI D+SQLVYLHLRFHGYGD Sbjct 301 IGKPATRRHEPDGGVSFHHHEVVGAKMTRKRLRELKYSKQMISDVSQLVYLHLRFHGYGD 360 Query 360 GKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQED 419 G+WTDSAVRRYVTDAG LL +LHKLVRADCTTRNKRRAARLQASYD LE RI ELAA+ED Sbjct 361 GRWTDSAVRRYVTDAGPLLGQLHKLVRADCTTRNKRRAARLQASYDDLERRIEELAAKED 420 Query 420 LDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 L RVRPD+DGN+IM +LDIP GPQVG+AW +LKELRL+RGPL +EA ELL WW +G Sbjct 421 LARVRPDIDGNEIMRILDIPPGPQVGQAWNHLKELRLDRGPLEYDEAVAELLKWWNEKG 479 >gi|169632007|ref|YP_001705656.1| Poly(A) polymerase PcnA [Mycobacterium abscessus ATCC 19977] gi|169243974|emb|CAM65002.1| Poly(A) polymerase PcnA [Mycobacterium abscessus] Length=478 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/477 (77%), Positives = 408/477 (86%), Gaps = 0/477 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +PE++ A+LL AAV LNRH LL ELG++F +AG +LYLVGGSVRDA LG+ DLDF Sbjct 1 MPESIPTAELLATAAVTLNRHKKLLSELGALFDSAGFDLYLVGGSVRDAALGKPGIDLDF 60 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE+VQ +V WA+A+WDTGI FGT+GV + R+EITTFR+DSYD+ SR+PEV F Sbjct 61 TTDARPEQVQNLVTGWAEAIWDTGIAFGTIGVARRGQRVEITTFRSDSYDQQSRNPEVVF 120 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GD LEGDLVRRDFT NAMAV++ GPGEF DPL GL ALRA VLDTP+AP SFGDDPL Sbjct 121 GDSLEGDLVRRDFTVNAMAVKIGPDGPGEFCDPLNGLEALRAGVLDTPSAPEISFGDDPL 180 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF VAPRV A+ MA QL RI+AERV ELDKL+VG P AGIDL+V Sbjct 181 RMLRAARFVSQLGFTVAPRVLEALHAMADQLGRITAERVQTELDKLIVGAHPVAGIDLLV 240 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 SG+GAVVLPE+G M++ IDEHHQHKDVY+HSLTVL QA+ LED+GPDLVLRWAALLHDI Sbjct 241 DSGLGAVVLPEVGQMQLTIDEHHQHKDVYRHSLTVLEQAVDLEDEGPDLVLRWAALLHDI 300 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKPATRRHE GGVSFHHHEVVGAKMVRKRMRALKYSKQM+DD+SQLVYLHLRFHGYGDG Sbjct 301 GKPATRRHEEGGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDDVSQLVYLHLRFHGYGDG 360 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 KWTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAARLQA+YD LEERIAELAA+EDL Sbjct 361 KWTDSAVRRYVTDAGPLLPRLHKLVRADCTTRNKRRAARLQANYDGLEERIAELAAKEDL 420 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 RVRPDLDGNQIM +L +PAGP VG+AW++LKELRLERGPL +EA L WW R Sbjct 421 ARVRPDLDGNQIMELLGVPAGPIVGQAWQFLKELRLERGPLDHDEAVEALRQWWAGR 477 >gi|111020630|ref|YP_703602.1| tRNA nucleotidyltransferase [Rhodococcus jostii RHA1] gi|110820160|gb|ABG95444.1| probable tRNA nucleotidyltransferase [Rhodococcus jostii RHA1] Length=483 Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/468 (73%), Positives = 391/468 (84%), Gaps = 0/468 (0%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 LL AAV L + +L LG FAAAGHELYLVGGSVRDA+LGRL DLDFTTDA PERV Sbjct 14 LLAGAAVTLRELSEVLTPLGERFAAAGHELYLVGGSVRDAILGRLGTDLDFTTDAHPERV 73 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLV 129 Q+++ WAD WDTGIEFGT+ K+ ++EITT+RAD+YDRVSR+P V+FG LE DLV Sbjct 74 QKLLSGWADNQWDTGIEFGTISAAKAGQQIEITTYRADAYDRVSRNPVVQFGTKLEDDLV 133 Query 130 RRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFV 189 RRDFT NAMAVR+ A G +F+DPLGG+ AL A VLDTP+AP SF DDPLRMLRAARFV Sbjct 134 RRDFTVNAMAVRIGADGSQDFVDPLGGMNALLAGVLDTPSAPENSFNDDPLRMLRAARFV 193 Query 190 SQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVL 249 SQLGF + RV AI +MAPQ+ RI+AERV AELDKL++GE P G+++M ++G+ VL Sbjct 194 SQLGFTLHERVHQAIVDMAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADFVL 253 Query 250 PEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE 309 PE+ M++ IDEHHQHKDVY HSLTVL+QA+ LED PDLVLRWAALLHDIGKP T+R+E Sbjct 254 PEVPQMKLEIDEHHQHKDVYWHSLTVLKQAVDLEDGDPDLVLRWAALLHDIGKPDTKRNE 313 Query 310 PDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRR 369 P GGVSFHHHEVVGAKMVRKRMRALKYSKQM+DD+SQLV+LHLRFHGYG G+WTDSAVRR Sbjct 314 PGGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDDVSQLVFLHLRFHGYGKGQWTDSAVRR 373 Query 370 YVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDG 429 YVTDAG LLPRLHKLVRADCTTRNKRRAA LQA+YD +EERIA LA QEDL RVRPDLDG Sbjct 374 YVTDAGPLLPRLHKLVRADCTTRNKRRAAALQATYDDIEERIARLAEQEDLARVRPDLDG 433 Query 430 NQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 N IM +L IPAGP VG+AW+YLKELRL+RGPLS +EA ELLSWW ++ Sbjct 434 NAIMELLGIPAGPDVGKAWKYLKELRLDRGPLSRDEAEAELLSWWATQ 481 >gi|226362873|ref|YP_002780653.1| tRNA nucleotidyltransferase [Rhodococcus opacus B4] gi|226241360|dbj|BAH51708.1| tRNA nucleotidyltransferase [Rhodococcus opacus B4] Length=483 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/468 (72%), Positives = 391/468 (84%), Gaps = 0/468 (0%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 LL AA+ L + +L LG FA+AGHELYLVGGSVRDA+LGRL DLDFTTDARPE+V Sbjct 14 LLAGAAMTLRELSEVLTPLGEKFASAGHELYLVGGSVRDAILGRLGTDLDFTTDARPEQV 73 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLV 129 Q+++ W D WDTGIEFGT+ K+ ++EITT+RAD+YDRVSR+P V+FG LE DLV Sbjct 74 QKLLSGWVDNQWDTGIEFGTISAAKAGQQIEITTYRADAYDRVSRNPVVQFGTKLEDDLV 133 Query 130 RRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFV 189 RRDFT NAMAVR+ A G +F+DPL G+ AL A +LDTP+AP SF DDPLRMLRAARFV Sbjct 134 RRDFTVNAMAVRIGADGSQDFVDPLNGMDALLAGMLDTPSAPENSFNDDPLRMLRAARFV 193 Query 190 SQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVL 249 SQLGF + RV AAI +MAPQ+ RI+AERV AELDKL++GE P G+++M ++G+ VL Sbjct 194 SQLGFTLHERVHAAIADMAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADFVL 253 Query 250 PEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE 309 PE+ M++ IDEHHQHKDVY HSLTVL+QA+ LED PDLVLRWAALLHDIGKP T+R+E Sbjct 254 PEVPQMKLEIDEHHQHKDVYWHSLTVLKQAVDLEDGDPDLVLRWAALLHDIGKPDTKRNE 313 Query 310 PDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRR 369 P GGVSFHHHEVVGAKMVRKRMRALKYSKQM+DD+SQLV+LHLRFHGYG G+WTDSAVRR Sbjct 314 PGGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDDVSQLVFLHLRFHGYGKGQWTDSAVRR 373 Query 370 YVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDG 429 YVTDAG LLPRLHKLVRADCTTRNKRRAA LQA+YD +EERIA +A QEDL RVRPDLDG Sbjct 374 YVTDAGPLLPRLHKLVRADCTTRNKRRAAALQATYDDIEERIARIAEQEDLARVRPDLDG 433 Query 430 NQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 N IM +L IPAGP VG+AW+YLKELRL+RGPLS +EA ELLSWW ++ Sbjct 434 NAIMELLGIPAGPDVGKAWKYLKELRLDRGPLSRDEAEAELLSWWAAQ 481 >gi|54027630|ref|YP_121872.1| putative tRNA nucleotidyltransferase [Nocardia farcinica IFM 10152] gi|54019138|dbj|BAD60508.1| putative tRNA nucleotidyltransferase [Nocardia farcinica IFM 10152] Length=485 Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/478 (72%), Positives = 392/478 (83%), Gaps = 1/478 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 +P + LL +AAV L A +L LG +FAA GHELYLVGGSVRDA+LGRL DLDF Sbjct 7 LPSEDRRTRLLASAAVTLGALADVLTPLGGLFAARGHELYLVGGSVRDAVLGRLGTDLDF 66 Query 61 TTDARPERVQEIVRPWADAVWDTG-IEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVR 119 TTDARPE+V EI+R WAD VWDTG + FGTV K+ ++EITTFR+D+YDRVSR+PEV Sbjct 67 TTDARPEQVLEIMRGWADHVWDTGGLAFGTVSAAKAGQQLEITTFRSDTYDRVSRNPEVT 126 Query 120 FGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDP 179 FGD LEGDLVRRDFT NAMAVR+ A G EF+DPLGG+ AL A VLDTPA+P SF DDP Sbjct 127 FGDTLEGDLVRRDFTVNAMAVRIAADGSLEFVDPLGGMDALLAGVLDTPASPEDSFDDDP 186 Query 180 LRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLM 239 LRMLRAARFVSQLGF +APRVRAAI MA Q+ RI+AERV ELDKL+ G+ P GID+M Sbjct 187 LRMLRAARFVSQLGFELAPRVRAAIGRMAEQIDRITAERVRVELDKLIAGDHPIDGIDIM 246 Query 240 VQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHD 299 ++G+ VLPE+ M++ IDEHHQHKDVY+HSLTVL QAI LED PDLVLRWAALLHD Sbjct 247 CETGLAQRVLPEVPAMKLEIDEHHQHKDVYRHSLTVLEQAIDLEDGDPDLVLRWAALLHD 306 Query 300 IGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD 359 IGKP T+R+EP GGVSFHHHEVVGAKMVRKRMRALKY KQ +D+++LV+LHLRFHGYG Sbjct 307 IGKPDTKRNEPGGGVSFHHHEVVGAKMVRKRMRALKYPKQFTEDVARLVFLHLRFHGYGK 366 Query 360 GKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQED 419 G+WTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRA+ LQA+YD LEERIA L +ED Sbjct 367 GQWTDSAVRRYVTDAGDLLPRLHKLVRADCTTRNKRRASALQATYDELEERIARLQQEED 426 Query 420 LDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 L +VRPDLDGN IM +L +P GP+VG AWRYLKELRL+RGPL+ EEA L+ WWKS+ Sbjct 427 LAKVRPDLDGNAIMELLGLPPGPEVGRAWRYLKELRLDRGPLTREEAEAALVEWWKSQ 484 >gi|262204638|ref|YP_003275846.1| tRNA adenylyltransferase [Gordonia bronchialis DSM 43247] gi|262087985|gb|ACY23953.1| tRNA adenylyltransferase [Gordonia bronchialis DSM 43247] Length=489 Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/468 (74%), Positives = 383/468 (82%), Gaps = 0/468 (0%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 LL A AV L +L LG++F AGHELYLVGGSVRDA+LGRL DLDFTTDARPE++ Sbjct 20 LLAAGAVTLRGLGDVLGPLGALFTDAGHELYLVGGSVRDAILGRLGNDLDFTTDARPEQI 79 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLV 129 E+V WADA+WD GIEFGTVGV K + +EITTFRAD+YDRV R+PEV FGD L+GDLV Sbjct 80 LELVGGWADAIWDVGIEFGTVGVRKGEAMIEITTFRADAYDRVGRNPEVTFGDTLDGDLV 139 Query 130 RRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFV 189 RRDFT NAMAVRV A G + LDPL G+ AL A V+DTPAAP SFGDDPLRMLRA RF+ Sbjct 140 RRDFTINAMAVRVDADGAQDLLDPLDGVTALLAGVIDTPAAPEDSFGDDPLRMLRAVRFI 199 Query 190 SQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVL 249 SQLGF +APRV AI MA Q+ RI+AERV ELDKL+ GE P ID MV++G+ VL Sbjct 200 SQLGFRLAPRVADAITRMADQIERITAERVRMELDKLICGEYPIDAIDAMVETGLAQHVL 259 Query 250 PEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE 309 PE+ GM++ IDEHHQHKDVYQHSLTVLRQAI LE+ PDLVLRWAALLHDIGKPATRRHE Sbjct 260 PEVPGMKLTIDEHHQHKDVYQHSLTVLRQAIDLEEGDPDLVLRWAALLHDIGKPATRRHE 319 Query 310 PDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRR 369 P GGVSFHHHEVVGAKMVRKRMRALKY K ++ D++ LVYLHLRFHGYGDG WTDSAVRR Sbjct 320 PGGGVSFHHHEVVGAKMVRKRMRALKYPKAVVSDVADLVYLHLRFHGYGDGTWTDSAVRR 379 Query 370 YVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDG 429 YVTDAG LL RLHKLVRADCTTRNKRRA RLQ +YD LE+RIA+LAA EDLDRVRPDLDG Sbjct 380 YVTDAGPLLGRLHKLVRADCTTRNKRRARRLQQNYDHLEQRIADLAAAEDLDRVRPDLDG 439 Query 430 NQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 N IM +L +P GP VGEAWRYLKELRL+RGPLS EEA L WW +R Sbjct 440 NAIMELLGLPPGPLVGEAWRYLKELRLDRGPLSHEEAEDALREWWAAR 487 >gi|296141887|ref|YP_003649130.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Tsukamurella paurometabola DSM 20162] gi|296030021|gb|ADG80791.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Tsukamurella paurometabola DSM 20162] Length=486 Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/468 (72%), Positives = 393/468 (84%), Gaps = 0/468 (0%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 LL AA ++L + +L LG+ FA AGHELYLVGGSVRDALLGRL+ DLDFTTDARPE+V Sbjct 16 LLAAAHISLRELSDVLVPLGTRFADAGHELYLVGGSVRDALLGRLTSDLDFTTDARPEQV 75 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLV 129 Q ++R WADA+WDTGIEFGTV D ++EITT+RA++YDRV+R+P V+FG+ L DLV Sbjct 76 QALLRGWADAMWDTGIEFGTVSAAFHDQQIEITTYRAEAYDRVTRNPVVKFGENLRDDLV 135 Query 130 RRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFV 189 RRDFT NAMAVR+ G +F DPL GL AL A V+DTPA P SF DDPLRMLRAARFV Sbjct 136 RRDFTINAMAVRIGRDGAEDFQDPLNGLDALLAGVIDTPATPEESFSDDPLRMLRAARFV 195 Query 190 SQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVL 249 SQLGFAVA RV+ A+ +MAP++ RI+AERV AELDKL++GE P GI L+V +G+ V+ Sbjct 196 SQLGFAVAARVQRAMTDMAPEIDRITAERVRAELDKLILGEHPVDGIVLLVDTGLAERVI 255 Query 250 PEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE 309 PEI GM++AIDEHHQHKDV+ HS+TVL+QAI LE+ PDL+LRWAALLHDIGKPATRRHE Sbjct 256 PEIPGMKLAIDEHHQHKDVFWHSMTVLQQAIDLEESDPDLILRWAALLHDIGKPATRRHE 315 Query 310 PDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRR 369 P+GGVSFHHHEVVGAKMVRKRMRAL Y K +I+D++QLV+LHLRFHGYGDG+WTDSAVRR Sbjct 316 PNGGVSFHHHEVVGAKMVRKRMRALAYPKSVIEDVAQLVFLHLRFHGYGDGQWTDSAVRR 375 Query 370 YVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDG 429 Y TDAG LLPRLHKLVRADCTTRNKRRAARLQA+YD LEERIA++AAQEDL RVRPDLDG Sbjct 376 YATDAGPLLPRLHKLVRADCTTRNKRRAARLQATYDGLEERIAKIAAQEDLARVRPDLDG 435 Query 430 NQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 N IM +L +P GPQVG AW+YLKELRL+RGP+ +EA EL WW ++ Sbjct 436 NAIMELLGLPPGPQVGAAWKYLKELRLDRGPMDRDEAEAELAKWWAAQ 483 >gi|312142006|ref|YP_004009342.1| polynucleotide adenylyltransferase [Rhodococcus equi 103S] gi|311891345|emb|CBH50666.1| putative polynucleotide adenylyltransferase [Rhodococcus equi 103S] Length=484 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/474 (71%), Positives = 389/474 (83%), Gaps = 0/474 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 P+A + A LL A L+ + +L LG+ F AGHELYLVGGSVRDA+LGRL DLDF Sbjct 5 TPDAERRARLLNGAHRTLSSLSDVLDPLGARFTEAGHELYLVGGSVRDAVLGRLGTDLDF 64 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDA PERVQ+I+R WAD WDTGI FGT+ K ++EITT+R D+YD V+R+PEV++ Sbjct 65 TTDAHPERVQQILRGWADNQWDTGIAFGTISAAKGADQIEITTYRTDTYDGVTRNPEVQY 124 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 G L+ DLVRRDFT NAMAVRV TG EF+DPL G+ AL A VLDTPAAP SF DDPL Sbjct 125 GTTLDEDLVRRDFTVNAMAVRVDGTGTFEFVDPLNGMDALLAGVLDTPAAPEISFNDDPL 184 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF +APRV AI EM+ Q+ RI+AERV ELDKL++GE P G+++M Sbjct 185 RMLRAARFVSQLGFTLAPRVHEAIVEMSGQIERITAERVRTELDKLILGEFPIDGVNVMC 244 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 ++G+ A V+PEI +++ IDEHHQHKDVY HSLTVL+QAI LED PDLVLRWAALLHDI Sbjct 245 ETGLAARVIPEIPQLKLEIDEHHQHKDVYWHSLTVLKQAIDLEDGDPDLVLRWAALLHDI 304 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKP T+R+EP GGVSFHHHEVVGAKMVRKRMRALKYSKQM+D++ QLV+LHLRFHGYG+G Sbjct 305 GKPDTKRNEPGGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDEVGQLVFLHLRFHGYGEG 364 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 +WTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAA+LQA+YD LE RIA +A QEDL Sbjct 365 QWTDSAVRRYVTDAGDLLPRLHKLVRADCTTRNKRRAAKLQATYDDLERRIARIAEQEDL 424 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWW 474 RVRPDLDGN IM +L IPAGPQVG+AW++LKELRL+RGPL +EA ELL WW Sbjct 425 ARVRPDLDGNAIMELLGIPAGPQVGKAWKFLKELRLDRGPLERDEAEAELLKWW 478 >gi|325677331|ref|ZP_08156996.1| polyA polymerase family protein [Rhodococcus equi ATCC 33707] gi|325551794|gb|EGD21491.1| polyA polymerase family protein [Rhodococcus equi ATCC 33707] Length=484 Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/474 (71%), Positives = 389/474 (83%), Gaps = 0/474 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 P+A + A LL A L+ + +L LG+ F AGHELYLVGGSVRDA+LGRL DLDF Sbjct 5 TPDAERRARLLNGAHRTLSSLSDVLDPLGARFTEAGHELYLVGGSVRDAVLGRLGTDLDF 64 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDA PE+VQ+I+R WAD WDTGI FGT+ K ++EITT+R D+YD V+R+PEV++ Sbjct 65 TTDAHPEQVQQILRGWADNQWDTGIAFGTISAAKGADQIEITTYRTDTYDGVTRNPEVQY 124 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 G L+ DLVRRDFT NAMAVRV TG EF+DPL G+ AL A VLDTPAAP SF DDPL Sbjct 125 GTTLDEDLVRRDFTVNAMAVRVDGTGTFEFVDPLNGMDALLAGVLDTPAAPEISFNDDPL 184 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF +APRV AI EM+ Q+ RI+AERV ELDKL++GE P G+++M Sbjct 185 RMLRAARFVSQLGFTLAPRVHEAIVEMSGQIERITAERVRTELDKLILGEFPIDGVNVMC 244 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 ++G+ A V+PEI +++ IDEHHQHKDVY HSLTVL+QAI LED PDLVLRWAALLHDI Sbjct 245 ETGLAARVIPEIPQLKLEIDEHHQHKDVYWHSLTVLKQAIDLEDGDPDLVLRWAALLHDI 304 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKP T+R+EP GGVSFHHHEVVGAKMVRKRMRALKYSKQM+D++ QLV+LHLRFHGYG+G Sbjct 305 GKPDTKRNEPGGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDEVGQLVFLHLRFHGYGEG 364 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 +WTDSAVRRYVTDAG LLPRLHKLVRADCTTRNKRRAA+LQA+YD LE RIA +A QEDL Sbjct 365 QWTDSAVRRYVTDAGDLLPRLHKLVRADCTTRNKRRAAKLQATYDDLERRIARIAEQEDL 424 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWW 474 RVRPDLDGN IM +L IPAGPQVG+AW++LKELRL+RGPL +EA ELL WW Sbjct 425 ARVRPDLDGNAIMELLGIPAGPQVGKAWKFLKELRLDRGPLERDEAEAELLKWW 478 >gi|229491197|ref|ZP_04385025.1| tRNA adenylyltransferase [Rhodococcus erythropolis SK121] gi|229321935|gb|EEN87728.1| tRNA adenylyltransferase [Rhodococcus erythropolis SK121] Length=483 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/468 (71%), Positives = 382/468 (82%), Gaps = 0/468 (0%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 LL A L + +L LG FAAAGHEL+LVGGSVRDA+LGR S DLDFTTDARPE+V Sbjct 14 LLADATATLGTLSDVLNPLGERFAAAGHELFLVGGSVRDAILGRFSGDLDFTTDARPEKV 73 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLV 129 Q +++ W D WDTGIEFGT+ K +EITTFRAD+YDRVSR+P V +G L DLV Sbjct 74 QALLKGWVDKQWDTGIEFGTISAIKHGQEIEITTFRADAYDRVSRNPIVEYGTTLADDLV 133 Query 130 RRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFV 189 RRDFT NAMA+++ A G F+DPL G+ AL A LDTP+AP SF DDPLRMLRAARFV Sbjct 134 RRDFTVNAMAMKIGADGSYTFVDPLNGMDALLAGELDTPSAPENSFNDDPLRMLRAARFV 193 Query 190 SQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVL 249 SQLGF + RV AI+EMA Q+ RI+AERV EL+KL++G P GI++MV SG+ A VL Sbjct 194 SQLGFTLNNRVFEAIKEMASQIERITAERVQVELNKLMLGMYPVDGINMMVDSGLAAYVL 253 Query 250 PEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE 309 PE+ M++ IDEHHQHKDVYQHSLTVL+QAI LE+ PDLVLRWAALLHDIGKP T+R+E Sbjct 254 PEVPQMKLEIDEHHQHKDVYQHSLTVLQQAIDLEEGDPDLVLRWAALLHDIGKPDTKRNE 313 Query 310 PDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRR 369 P GGVSFHHHEVVGAK+VRKRMRALK+SKQM+DD+SQLV+LHLRFHGYG G+WTDSAVRR Sbjct 314 PGGGVSFHHHEVVGAKLVRKRMRALKFSKQMVDDVSQLVFLHLRFHGYGKGQWTDSAVRR 373 Query 370 YVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDG 429 YVTDAG LLPRLHKLVRADCTTRNKRRAA+LQA+YD +EERIA +A QEDL RVRPDLDG Sbjct 374 YVTDAGELLPRLHKLVRADCTTRNKRRAAQLQATYDDIEERIARIAEQEDLARVRPDLDG 433 Query 430 NQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 N IM +L+IPAGPQVG+AW +LKELRL+RGPL +EA ELL WW ++ Sbjct 434 NAIMELLNIPAGPQVGKAWTFLKELRLDRGPLERDEAEAELLKWWATQ 481 >gi|226309497|ref|YP_002769459.1| tRNA nucleotidyltransferase [Rhodococcus erythropolis PR4] gi|226188616|dbj|BAH36720.1| putative tRNA nucleotidyltransferase [Rhodococcus erythropolis PR4] Length=483 Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/468 (70%), Positives = 381/468 (82%), Gaps = 0/468 (0%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 LL A L + +L LG FA AGHEL+LVGGSVRDA+LGR S DLDFTTDARPE+V Sbjct 14 LLADATATLGTLSDVLNPLGERFAEAGHELFLVGGSVRDAILGRFSGDLDFTTDARPEKV 73 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLV 129 Q +++ W D WDTGIEFGT+ K +EITTFRAD+YDRVSR+P V +G L DLV Sbjct 74 QALLKGWVDKQWDTGIEFGTISAIKHGQEIEITTFRADAYDRVSRNPIVEYGTTLADDLV 133 Query 130 RRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFV 189 RRDFT NAMA+++ A G F+DPL G+ AL A LDTP+AP SF DDPLRMLRAARFV Sbjct 134 RRDFTVNAMAMKIGADGSYTFVDPLNGMDALLAGELDTPSAPENSFNDDPLRMLRAARFV 193 Query 190 SQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVL 249 SQLGF + RV AI+EMA Q+ RI+AERV EL+K+++G P GI++MV SG+ A VL Sbjct 194 SQLGFTLNNRVFEAIKEMASQIERITAERVQVELNKMILGMYPVDGINMMVDSGLAAYVL 253 Query 250 PEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE 309 PE+ M++ IDEHHQHKDVYQHSLTVL+QAI LE+ PDLVLRWAALLHDIGKP T+R+E Sbjct 254 PEVPQMKLEIDEHHQHKDVYQHSLTVLQQAIDLEEGDPDLVLRWAALLHDIGKPDTKRNE 313 Query 310 PDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRR 369 P GGVSFHHHEVVGAK+VRKRMRALK+SKQM+DD+SQLV+LHLRFHGYG G+WTDSAVRR Sbjct 314 PGGGVSFHHHEVVGAKLVRKRMRALKFSKQMVDDVSQLVFLHLRFHGYGKGQWTDSAVRR 373 Query 370 YVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDG 429 YVTDAG LLPRLHKLVRADCTTRNKRRAA+LQA+YD +EERIA +A QEDL RVRPDLDG Sbjct 374 YVTDAGELLPRLHKLVRADCTTRNKRRAAQLQATYDDIEERIARIAEQEDLARVRPDLDG 433 Query 430 NQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 N IM +L+IPAGPQVG+AW +LKELRL+RGPL +EA ELL WW ++ Sbjct 434 NAIMELLNIPAGPQVGKAWTFLKELRLDRGPLERDEAEAELLKWWATQ 481 >gi|343928710|ref|ZP_08768155.1| putative tRNA nucleotidyltransferase [Gordonia alkanivorans NBRC 16433] gi|343761459|dbj|GAA15081.1| putative tRNA nucleotidyltransferase [Gordonia alkanivorans NBRC 16433] Length=480 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/457 (72%), Positives = 379/457 (83%), Gaps = 0/457 (0%) Query 24 LLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPWADAVWDT 83 +L LG +FAAAGHELYLVGGSVRDA+LGRL DLDFTTDARPE+V +++ WADA WD Sbjct 24 VLAPLGELFAAAGHELYLVGGSVRDAVLGRLGNDLDFTTDARPEQVSRLLKGWADAFWDV 83 Query 84 GIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143 GIEFGTVG+ K +H++EITTFRADSYD+VSR+PEV FG+ L+ DL+RRDFT NAMAVR+ Sbjct 84 GIEFGTVGIRKGEHQIEITTFRADSYDQVSRNPEVTFGETLDDDLIRRDFTVNAMAVRIG 143 Query 144 ATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAA 203 ATG +F DPL G++AL A ++DTPA P SFGDDPLRMLRA RF+SQLGF +APRV A Sbjct 144 ATGAEDFCDPLDGMSALLAGMIDTPATPEQSFGDDPLRMLRAVRFISQLGFGLAPRVWQA 203 Query 204 IEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHH 263 I EM ++ RI+AERV AELDKL+ GE P ID MV++G+ V+PEI GM++ IDEHH Sbjct 204 ITEMNGEIDRITAERVRAELDKLICGEFPLDAIDAMVETGLAERVMPEIPGMKLTIDEHH 263 Query 264 QHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVG 323 QHKDVYQHSLTVL+QAI LE+ PDLVLRWAALLHDIGKPATRRHEP GGVSFHHHEVVG Sbjct 264 QHKDVYQHSLTVLKQAIDLEEGDPDLVLRWAALLHDIGKPATRRHEPGGGVSFHHHEVVG 323 Query 324 AKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHK 383 AKMVRKRMRALKY K ++ D++ LV+LHLRFHGYGDG WTDSAVRRYV DAG LL RL+K Sbjct 324 AKMVRKRMRALKYPKAVVSDVADLVFLHLRFHGYGDGAWTDSAVRRYVNDAGPLLDRLNK 383 Query 384 LVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQ 443 LVRADCTTRNKRRA RLQ +YD LE+RIA L EDL++VRPDLDGN IM +L +P GP Sbjct 384 LVRADCTTRNKRRARRLQQNYDNLEQRIAALKEAEDLEKVRPDLDGNAIMEMLGVPPGPI 443 Query 444 VGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 VG+AWRYLKELRL+RGPLS EEA L WW +RG + Sbjct 444 VGQAWRYLKELRLDRGPLSHEEAEQALGEWWAARGEK 480 >gi|333922219|ref|YP_004495800.1| putative tRNA nucleotidyltransferase [Amycolicicoccus subflavus DQS3-9A1] gi|333484440|gb|AEF43000.1| putative tRNA nucleotidyltransferase [Amycolicicoccus subflavus DQS3-9A1] Length=491 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/457 (71%), Positives = 366/457 (81%), Gaps = 0/457 (0%) Query 18 LNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPWA 77 L H AL ELG F A G ELYLVGGSVRDA+LGRL DLDFTT+A PE V+E +R WA Sbjct 26 LRDHDALFTELGRRFDAIGSELYLVGGSVRDAMLGRLGKDLDFTTNALPETVREALRGWA 85 Query 78 DAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNA 137 DAVW+TGI FGT+ K ++EITT+R DSYDRV R PEV +GD L DLVRRDF NA Sbjct 86 DAVWETGIAFGTISASKQGVQVEITTYRTDSYDRVGRKPEVSYGDSLNDDLVRRDFRVNA 145 Query 138 MAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVA 197 MAV+V +G G F DPL GLA L A VLDTPAAP SF DDPLRMLRAARF SQLG + Sbjct 146 MAVQVRVSGIGSFTDPLNGLADLAAGVLDTPAAPEDSFNDDPLRMLRAARFASQLGLQLT 205 Query 198 PRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRM 257 PRV AI EMA Q+ R++AER+ AELDKL+ G DP AG++++V +G+ VLPE+ M++ Sbjct 206 PRVDQAIREMADQIKRVTAERIRAELDKLMEGSDPIAGLEVLVSTGLAEHVLPEVPAMQL 265 Query 258 AIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFH 317 IDEHHQHKDVY HSLTVLRQAI ED+GPDLVLRWAALLHDIGKPATR+HEP GGVSFH Sbjct 266 EIDEHHQHKDVYTHSLTVLRQAIEREDNGPDLVLRWAALLHDIGKPATRKHEPGGGVSFH 325 Query 318 HHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGAL 377 HHEVVGAKM RKRMRAL+YSKQMI+D+S+LVYLHLRFHGYG G+WTDSAVRRYVTDAG L Sbjct 326 HHEVVGAKMTRKRMRALRYSKQMIEDVSRLVYLHLRFHGYGKGQWTDSAVRRYVTDAGPL 385 Query 378 LPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLD 437 L RL+KLVRADCTTRNKRRA LQ +YD LE RIA + QEDL RVRPDLDGN IM +L Sbjct 386 LDRLNKLVRADCTTRNKRRALALQRAYDDLEARIARIQEQEDLARVRPDLDGNAIMELLG 445 Query 438 IPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWW 474 +P GP+VG+AW++LKELRLERGPLS +EA L WW Sbjct 446 LPPGPEVGKAWKFLKELRLERGPLSRDEAEAALREWW 482 >gi|326383888|ref|ZP_08205572.1| tRNA adenylyltransferase [Gordonia neofelifaecis NRRL B-59395] gi|326197347|gb|EGD54537.1| tRNA adenylyltransferase [Gordonia neofelifaecis NRRL B-59395] Length=484 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/475 (68%), Positives = 366/475 (78%), Gaps = 0/475 (0%) Query 6 QEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDAR 65 + A LL +A V L +L L FAA GHELYLVGGSVRDA+LGRL+ DLD TTDAR Sbjct 9 RRARLLASATVTLQSLGDVLTPLADSFAARGHELYLVGGSVRDAVLGRLAGDLDLTTDAR 68 Query 66 PERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLE 125 P + EI+R W DAVWDTGI+FGTV K+ +EITTFR+D YD+ SR+P V FGD L+ Sbjct 69 PAVIAEILRSWGDAVWDTGIDFGTVSAAKAGATVEITTFRSDIYDQQSRNPVVTFGDTLD 128 Query 126 GDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRA 185 GDL+RRDF NAMAVR+ G EF DPL G+ L A ++DTPAAP SF DDPLRMLR Sbjct 129 GDLIRRDFRINAMAVRLLPGGGQEFCDPLDGMTDLLAGIIDTPAAPESSFNDDPLRMLRG 188 Query 186 ARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMG 245 RFVSQLGF ++ RV A MA Q+ RI+AER+ ELDK + GE P +DL+V++G+ Sbjct 189 VRFVSQLGFRMSDRVLEATRSMAGQIERITAERIRVELDKTICGEHPLEAVDLLVETGLA 248 Query 246 AVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPAT 305 +++PEI GM++ IDEHHQHKDVYQHSLTVL+QAI LE PD VLRWAALLHDIGKPAT Sbjct 249 ELIIPEIPGMKLTIDEHHQHKDVYQHSLTVLQQAIDLETGDPDPVLRWAALLHDIGKPAT 308 Query 306 RRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDS 365 RRHE GGVSFHHHEVVGAKMVRKRMRALKY K ++DD+SQLV+LHLRFHGYGDG WTDS Sbjct 309 RRHEDGGGVSFHHHEVVGAKMVRKRMRALKYPKAVVDDVSQLVFLHLRFHGYGDGMWTDS 368 Query 366 AVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRP 425 AVRRYVTDAG LL RLHKLVRADCTTRNKRRA RLQ +YD LE RIA L EDLDRVRP Sbjct 369 AVRRYVTDAGPLLDRLHKLVRADCTTRNKRRARRLQETYDDLERRIAVLREAEDLDRVRP 428 Query 426 DLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR 480 DLDGN IM +L +P GP VGEAWRYLKELRL+ GP+S E+A L WW R R Sbjct 429 DLDGNAIMELLGLPPGPLVGEAWRYLKELRLDSGPMSREDAEAALREWWAQRDGR 483 >gi|319948990|ref|ZP_08023091.1| polynucleotide adenylyltransferase [Dietzia cinnamea P4] gi|319437345|gb|EFV92364.1| polynucleotide adenylyltransferase [Dietzia cinnamea P4] Length=542 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/470 (69%), Positives = 378/470 (81%), Gaps = 5/470 (1%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 LL A LN+ A +L L + F AGHELYLVGGSVRDA+LGRL DLDFTTDARPE V Sbjct 50 LLAGAQTTLNQLADVLSPLAAAFGEAGHELYLVGGSVRDAVLGRLGTDLDFTTDARPEAV 109 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSD-----HRMEITTFRADSYDRVSRHPEVRFGDCL 124 + I+ +ADAVWDTGIEFGT+ K D ++EITTFRADSYD V+R+PEV +GD L Sbjct 110 RGILDRYADAVWDTGIEFGTLSAVKRDGDGIEQQIEITTFRADSYDGVTRNPEVVYGDTL 169 Query 125 EGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLR 184 GDLVRRDFT NAMAVR+ G EF+DPL G+ AL A V+DTPAAP SF DDPLRMLR Sbjct 170 SGDLVRRDFTVNAMAVRLHPDGRHEFVDPLNGMDALLAGVIDTPAAPEQSFADDPLRMLR 229 Query 185 AARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGM 244 A RFVSQLGF +APRV A+ EM ++ RI+AERV AELDK ++G+ P GI+++ ++G+ Sbjct 230 ACRFVSQLGFTLAPRVFRAMTEMTAEIDRITAERVRAELDKTILGDYPIDGINMLCETGL 289 Query 245 GAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPA 304 VLPE+ GM++ DEH QHKDVY HSLTVL+QAI LE +GPDLVLRWAALLHDIGKPA Sbjct 290 ADHVLPEVPGMKLERDEHMQHKDVYWHSLTVLKQAIDLEPEGPDLVLRWAALLHDIGKPA 349 Query 305 TRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTD 364 TR +P GGV+FHHHEVVGAKMVRKRMRALKY KQMI+D+S LV+LHLRFHGYG+G+WTD Sbjct 350 TRAPKPGGGVTFHHHEVVGAKMVRKRMRALKYPKQMIEDVSGLVFLHLRFHGYGEGQWTD 409 Query 365 SAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVR 424 SAVRRYV+DAG LLPRLH+LVRADCTTRN+RRAA+LQA+YD LE RIAE+ +EDL RVR Sbjct 410 SAVRRYVSDAGHLLPRLHRLVRADCTTRNRRRAAKLQANYDSLERRIAEIEEKEDLARVR 469 Query 425 PDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWW 474 PDLDGN+IM++L + GP VG AW +LKELRL+RGPL +EA ELL WW Sbjct 470 PDLDGNEIMSLLGLGPGPDVGRAWAFLKELRLDRGPLDRDEAEAELLRWW 519 >gi|19554274|ref|NP_602276.1| putative polynucleotide polymerase [Corynebacterium glutamicum ATCC 13032] gi|62391931|ref|YP_227333.1| polyA polymerase [Corynebacterium glutamicum ATCC 13032] gi|41223078|emb|CAF19023.1| POLYA POLYMERASE [Corynebacterium glutamicum ATCC 13032] gi|344045516|gb|EGV41187.1| polyA polymerase [Corynebacterium glutamicum S9114] Length=494 Score = 635 bits (1638), Expect = 4e-180, Method: Compositional matrix adjust. Identities = 311/482 (65%), Positives = 368/482 (77%), Gaps = 4/482 (0%) Query 2 PEAV-QEAD---LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPD 57 P+ V QE D L+ A A+ + +L L + F++ GH LYLVGGSVRDA LG L D Sbjct 12 PQKVDQEVDRLALMARAHQAIGELSDILVPLAAAFSSKGHSLYLVGGSVRDAFLGELGHD 71 Query 58 LDFTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPE 117 LDFTT ARPE + I+ +AD VWDTGI FGT+ K ++EITTFR+D YD SR+PE Sbjct 72 LDFTTSARPEETKAILDDYADVVWDTGIAFGTLSAEKHGQQIEITTFRSDLYDGNSRNPE 131 Query 118 VRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGD 177 V FGD LEGDL+RRDF NAMAV + A G F DP+GGL L LDTPA P SF D Sbjct 132 VTFGDTLEGDLIRRDFKVNAMAVEIQADGELTFHDPVGGLEDLLTHTLDTPATPEQSFND 191 Query 178 DPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGID 237 DPLRMLRAARFVSQL F +APRV A+ EMA Q+ RI+ ER+ ELDK+++G++P AGID Sbjct 192 DPLRMLRAARFVSQLNFTLAPRVITAMTEMAQQITRITVERMQVELDKMILGKNPEAGID 251 Query 238 LMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALL 297 LMV+SG+ ++ PEI M+M DEH QHKDVY HSL V+RQAI E+DGPDLVLRWAALL Sbjct 252 LMVESGIAQIIYPEIPAMQMTQDEHMQHKDVYAHSLQVMRQAIDQEEDGPDLVLRWAALL 311 Query 298 HDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGY 357 HD GKP TR +G VSFH HEVVGAK+VR+RMR LKYSKQM+ D+ QLV+LH+RFHG+ Sbjct 312 HDCGKPDTRDFNEEGRVSFHQHEVVGAKLVRRRMRKLKYSKQMVGDVGQLVFLHMRFHGF 371 Query 358 GDGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQ 417 +G+WTDSAVRRY DAG LLPRLHKLVRADCTTRNKR+AARLQA+YD LEERIAE+AA+ Sbjct 372 SEGQWTDSAVRRYAADAGELLPRLHKLVRADCTTRNKRKAARLQATYDHLEERIAEIAAK 431 Query 418 EDLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSR 477 EDL RVRPDLDGN+IM +L+I AGP+VG+AW +LKELRLERGPL E A EL SWW+ Sbjct 432 EDLARVRPDLDGNEIMEILNIQAGPEVGKAWAFLKELRLERGPLDREVAIAELKSWWEGE 491 Query 478 GN 479 N Sbjct 492 NN 493 >gi|302531336|ref|ZP_07283678.1| tRNA adenylyltransferase [Streptomyces sp. AA4] gi|302440231|gb|EFL12047.1| tRNA adenylyltransferase [Streptomyces sp. AA4] Length=481 Score = 633 bits (1632), Expect = 3e-179, Method: Compositional matrix adjust. Identities = 319/470 (68%), Positives = 366/470 (78%), Gaps = 8/470 (1%) Query 14 AAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIV 73 A L R + L EL FA AGH LYLVGGSVRDALLGRLS DLDFTTDARP+RV +IV Sbjct 10 AVTELMRVSPLADELAERFARAGHSLYLVGGSVRDALLGRLSSDLDFTTDARPDRVLQIV 69 Query 74 RPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDF 133 W DAVWD GI FGTVGV K+ +EITTFRADSYDRV R+PEV FGD +EGDL+RRDF Sbjct 70 SEWGDAVWDVGIAFGTVGVTKNGTTLEITTFRADSYDRVGRNPEVTFGDTIEGDLLRRDF 129 Query 134 TTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLG 193 T NAMA+ + F+DP G+ ALR KVLDTPA P SF DDPLRM+RAARF +QLG Sbjct 130 TVNAMAIDLVGK---TFIDPHDGMDALRLKVLDTPALPQESFADDPLRMMRAARFSAQLG 186 Query 194 FAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIG 253 F APRV A+ MA ++ RI+AERV EL KL++ DP G++L+V +G+ VLPE+ Sbjct 187 FTAAPRVVEAMTSMAEEIDRITAERVQTELSKLMLAPDPRPGLELLVDTGLADRVLPELP 246 Query 254 GMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDG-----PDLVLRWAALLHDIGKPATRRH 308 GMR+AIDEHHQHKDVYQHSLTVL QAIALE PDLVLR AALLHDIGKPATR Sbjct 247 GMRLAIDEHHQHKDVYQHSLTVLAQAIALEKSHEPTSEPDLVLRLAALLHDIGKPATREF 306 Query 309 EPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVR 368 P GGVSFHHHEVVGA+M RKR+RALKYSK++++ +SQLV+LHLRFHGYG G+WTDSAVR Sbjct 307 TPGGGVSFHHHEVVGARMARKRLRALKYSKEIVEQVSQLVFLHLRFHGYGGGEWTDSAVR 366 Query 369 RYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLD 428 RYVTDAG LL RLHKLVRAD TTRNKR+AA LQA+YD LE RI + QEDLDRVRPDLD Sbjct 367 RYVTDAGDLLTRLHKLVRADSTTRNKRKAAALQATYDDLEARIERIKEQEDLDRVRPDLD 426 Query 429 GNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 GN+IM +L +P GPQVG AW++LKELRL+RGPL +EA EL W K+ G Sbjct 427 GNEIMRLLGLPPGPQVGRAWKFLKELRLDRGPLDHDEAVAELKKWAKTEG 476 >gi|145297078|ref|YP_001139899.1| hypothetical protein cgR_2974 [Corynebacterium glutamicum R] gi|140846998|dbj|BAF55997.1| hypothetical protein [Corynebacterium glutamicum R] Length=470 Score = 630 bits (1626), Expect = 1e-178, Method: Compositional matrix adjust. Identities = 304/463 (66%), Positives = 358/463 (78%), Gaps = 0/463 (0%) Query 17 ALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPW 76 A+ + +L L + F++ GH LYLVGGSVRDA LG L DLDFTT ARPE + I+ + Sbjct 7 AIGELSDILVPLAAAFSSKGHSLYLVGGSVRDAFLGELGHDLDFTTSARPEETKAILDDY 66 Query 77 ADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTN 136 AD VWDTGI FGT+ K ++EITTFR+D YD SR+PEV FGD LEGDL+RRDF N Sbjct 67 ADVVWDTGIAFGTLSAEKHGQQIEITTFRSDLYDGNSRNPEVTFGDTLEGDLIRRDFKVN 126 Query 137 AMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAV 196 AMA + A G F DP+GGL L LDTPA P SF DDPLRMLRAARFVSQL F + Sbjct 127 AMAAEIQADGELTFHDPVGGLEDLLTHTLDTPATPEQSFNDDPLRMLRAARFVSQLNFTL 186 Query 197 APRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMR 256 APRV A+ EMA Q+ RI+ ER+ ELDK+++G++P AGIDLMV+SG+ +V PEI M+ Sbjct 187 APRVITAMTEMAQQITRITVERMQVELDKMILGKNPEAGIDLMVESGIAQIVYPEIPAMQ 246 Query 257 MAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSF 316 M DEH QHKDVY HSL V+RQAI E+DGPDLVLRWAALLHD GKP TR +G VSF Sbjct 247 MTQDEHMQHKDVYAHSLQVMRQAIDQEEDGPDLVLRWAALLHDCGKPDTRDFNEEGRVSF 306 Query 317 HHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGA 376 H HEVVGAK+VR+RMR LKYSKQM+ D+ QLV+LH+RFHG+ +G+WTDSAVRRY DAG Sbjct 307 HQHEVVGAKLVRRRMRKLKYSKQMVGDVGQLVFLHMRFHGFSEGQWTDSAVRRYAADAGE 366 Query 377 LLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVL 436 LLPRLHKLVRADCTTRNKR+AARLQA+YD LEERIAE+AA+EDL RVRPDLDGN+IM +L Sbjct 367 LLPRLHKLVRADCTTRNKRKAARLQATYDHLEERIAEIAAKEDLARVRPDLDGNEIMEIL 426 Query 437 DIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGN 479 +I AGP+VG+AW +LKELRLERGPL E A EL SWW+ N Sbjct 427 NIQAGPEVGKAWAFLKELRLERGPLDREVAIAELKSWWEGENN 469 >gi|257057896|ref|YP_003135728.1| tRNA adenylyltransferase [Saccharomonospora viridis DSM 43017] gi|256587768|gb|ACU98901.1| tRNA adenylyltransferase [Saccharomonospora viridis DSM 43017] Length=523 Score = 629 bits (1623), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 318/470 (68%), Positives = 366/470 (78%), Gaps = 8/470 (1%) Query 14 AAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERVQEIV 73 A L R + + EL + F+ AGH LYLVGGSVRDALLG+LS DLDFTTDARPE++Q IV Sbjct 21 AVAELMRVSPIADELAARFSRAGHRLYLVGGSVRDALLGKLSTDLDFTTDARPEQIQRIV 80 Query 74 RPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDF 133 WA+AVWDTGIEFGTVGV K EITTFRAD YDRV RHPEV FGD +E DLVRRDF Sbjct 81 SGWAEAVWDTGIEFGTVGVAKHGTTCEITTFRADRYDRVGRHPEVEFGDSIESDLVRRDF 140 Query 134 TTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLG 193 T NAMAV + F+DP GL AL + LDTPA P SF DDPLRMLRAARFVSQLG Sbjct 141 TVNAMAVDLATKS---FVDPHNGLEALARRTLDTPATPEESFADDPLRMLRAARFVSQLG 197 Query 194 FAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIG 253 F PRV A+ +MA ++ RI+AERV AEL KL++G P GI+LMV +G+ VLPE+ Sbjct 198 FEPEPRVVRAMTDMADEIKRITAERVQAELSKLILGSAPRKGIELMVDTGLADHVLPEVP 257 Query 254 GMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDG-----PDLVLRWAALLHDIGKPATRRH 308 GMR+AIDEHHQHKDVYQHSL VL QAI LE PDLVLR AALLHDIGKPATRR Sbjct 258 GMRLAIDEHHQHKDVYQHSLKVLEQAIDLETAHEPRLEPDLVLRLAALLHDIGKPATRRF 317 Query 309 EPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVR 368 EP GGVSFHHHEVVGAKM RKR+RAL+Y K +++D+SQLV+LHLRFHGYG G+WTDSAVR Sbjct 318 EPGGGVSFHHHEVVGAKMARKRLRALRYPKDVVNDVSQLVFLHLRFHGYGRGEWTDSAVR 377 Query 369 RYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLD 428 RYVTDAG LLP+LHKLVRADCTTRNKR+AA LQ +YD LE+RI +A +EDL +VRPDLD Sbjct 378 RYVTDAGPLLPKLHKLVRADCTTRNKRKAAALQRAYDDLEQRIERIAKEEDLAKVRPDLD 437 Query 429 GNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 GN+IM +L + GP VG+AW++LKELRL+RGPL +EA ELL W +G Sbjct 438 GNEIMRILGVEPGPIVGKAWKHLKELRLDRGPLGRDEAVAELLRWAAEQG 487 >gi|886309|gb|AAB53125.1| polyA polymerase [Mycobacterium leprae] Length=411 Score = 629 bits (1622), Expect = 3e-178, Method: Compositional matrix adjust. Identities = 308/373 (83%), Positives = 342/373 (92%), Gaps = 1/373 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRL-SPDLD 59 +PEA Q+ DLLT AAV LNRH +LR+LGSVFAA+GHELYLVGGSVRDALLGRL SPDLD Sbjct 1 MPEAAQDTDLLTVAAVTLNRHTPVLRDLGSVFAASGHELYLVGGSVRDALLGRLDSPDLD 60 Query 60 FTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVR 119 F TDA PE+VQ+I+R WAD +W+TGIEFGT+GVGK D+R+EITTFRAD YD+VSR+PEVR Sbjct 61 FATDAGPEQVQQIMRRWADNLWETGIEFGTIGVGKGDYRLEITTFRADRYDQVSRNPEVR 120 Query 120 FGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDP 179 F D L+ DLVRRDFT NAMAVR+ + GPGEF DPLGGLAALR +VL+TPAAPS SFGDDP Sbjct 121 FSDRLDDDLVRRDFTVNAMAVRIASYGPGEFFDPLGGLAALRVRVLETPAAPSVSFGDDP 180 Query 180 LRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLM 239 LR++RAARFVSQLGF VAP+V AAIEEMA QLARISAERV+ ELDKLL+G D AAGIDL+ Sbjct 181 LRIVRAARFVSQLGFTVAPQVHAAIEEMASQLARISAERVSTELDKLLLGNDAAAGIDLL 240 Query 240 VQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHD 299 VQ+GMG VVLPEIG MRMAIDEHHQHKDVYQHSLTVLRQAIALED+GPDLVLRWAALLHD Sbjct 241 VQTGMGEVVLPEIGDMRMAIDEHHQHKDVYQHSLTVLRQAIALEDNGPDLVLRWAALLHD 300 Query 300 IGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGD 359 IGKPATRRHE +GGVSFHHHEVVGAKMVRKRMRALKY+KQ++DD+SQLVYLHLRFHGYG+ Sbjct 301 IGKPATRRHELNGGVSFHHHEVVGAKMVRKRMRALKYAKQLVDDVSQLVYLHLRFHGYGE 360 Query 360 GKWTDSAVRRYVT 372 GKWTDSAVRRYVT Sbjct 361 GKWTDSAVRRYVT 373 >gi|300791145|ref|YP_003771436.1| poly(A) polymerase [Amycolatopsis mediterranei U32] gi|299800659|gb|ADJ51034.1| poly(A) polymerase [Amycolatopsis mediterranei U32] gi|340532844|gb|AEK48049.1| poly(A) polymerase [Amycolatopsis mediterranei S699] Length=478 Score = 629 bits (1622), Expect = 3e-178, Method: Compositional matrix adjust. Identities = 318/475 (67%), Positives = 371/475 (79%), Gaps = 8/475 (1%) Query 9 DLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPER 68 D++ V L + + L EL FA AGH LYLVGGSVRDALLGR S DLDFTTDARP+R Sbjct 3 DVVEKQVVELMQVSPLAEELAERFARAGHRLYLVGGSVRDALLGRRSGDLDFTTDARPDR 62 Query 69 VQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDL 128 V +IV W DAVWD GI FGTVGV K ++EITTFRADSYDRV R+PEV FGD +EGDL Sbjct 63 VLKIVSGWGDAVWDVGIAFGTVGVTKKGMQLEITTFRADSYDRVGRNPEVTFGDSIEGDL 122 Query 129 VRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARF 188 +RRDFT NAMAV + + F+DP GL+ALR +VLDTPA P SF DDPLRMLRAARF Sbjct 123 LRRDFTVNAMAVDLASK---TFIDPHDGLSALRERVLDTPATPQESFADDPLRMLRAARF 179 Query 189 VSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVV 248 +QL FA APRV A+ MA ++ RI+AERV AEL KLL+ DP G++L+V +G+ V Sbjct 180 AAQLDFAAAPRVVDAMTSMAEEIDRITAERVQAELSKLLLAADPRPGLELLVDTGLADRV 239 Query 249 LPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDG-----PDLVLRWAALLHDIGKP 303 LPE+ GMR+AIDEHHQHKDVYQHSLTVL QAI LE PDL+LR AALLHD+GKP Sbjct 240 LPEVAGMRLAIDEHHQHKDVYQHSLTVLAQAIDLESSHEPTSEPDLILRLAALLHDVGKP 299 Query 304 ATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWT 363 ATR + GGVSFHHHEVVGA+M RKR+RALK+SK+++DD+SQLV+LHLRFHGYG G+WT Sbjct 300 ATREFQEGGGVSFHHHEVVGARMARKRLRALKFSKEIVDDVSQLVFLHLRFHGYGKGEWT 359 Query 364 DSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRV 423 DSAVRRYVTDAG LL RLHKLVRADCTTRN+R+AA LQA+YD LE RIA L A+EDLDRV Sbjct 360 DSAVRRYVTDAGPLLTRLHKLVRADCTTRNRRKAAVLQATYDDLEARIAALKAKEDLDRV 419 Query 424 RPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 RPDL+G QIMA+L + GP VG+AW++LKELRL+RGPL +EA EL W G Sbjct 420 RPDLNGEQIMALLGLKPGPDVGKAWKFLKELRLDRGPLDHDEAVAELKKWAAENG 474 >gi|38234901|ref|NP_940668.1| putative tRNA nucleotidyltransferase [Corynebacterium diphtheriae NCTC 13129] gi|38201166|emb|CAE50890.1| Putative tRNA nucleotidyltransferase [Corynebacterium diphtheriae] Length=495 Score = 620 bits (1598), Expect = 2e-175, Method: Compositional matrix adjust. Identities = 306/474 (65%), Positives = 366/474 (78%), Gaps = 0/474 (0%) Query 1 VPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF 60 V EA A+LL A L + LL L F GH LYLVGGSVRDALL L DLD Sbjct 19 VLEAADPAELLVRAQKTLGLLSPLLSPLAQAFHDRGHRLYLVGGSVRDALLDELGHDLDC 78 Query 61 TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF 120 TTDARPE V I+ +A VWDTGIEFGTV K ++EITTFR+D YD SR+PEV+F Sbjct 79 TTDARPEVVSAILEEYAPVVWDTGIEFGTVSAEKDGQQIEITTFRSDVYDGQSRNPEVQF 138 Query 121 GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL 180 GD LEGDL+RRDFT NAMA+ + G +F DP+GG+ L A +LDTPA P SF DDPL Sbjct 139 GDTLEGDLIRRDFTVNAMAMEILPDGSMQFHDPVGGMNDLVAGLLDTPATPQQSFNDDPL 198 Query 181 RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV 240 RMLRAARFVSQLGF +APRVR A+ EMA Q+ RI+AERV ELDK++ G+ P GID+MV Sbjct 199 RMLRAARFVSQLGFDLAPRVRHAMTEMADQITRITAERVQVELDKMICGKVPWDGIDVMV 258 Query 241 QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI 300 +G+ ++ PEI +R+ DEHHQHKDVY HSLTVLRQA+ E+DGPD+VLRWAAL+HD Sbjct 259 DTGLADIIYPEISALRLTQDEHHQHKDVYAHSLTVLRQAMDQEEDGPDVVLRWAALMHDC 318 Query 301 GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG 360 GKP TR P+G VSFH HE+VGA+++R RMRALKYSK I D+S+L+ LH+RFHG+ +G Sbjct 319 GKPDTREFSPEGRVSFHQHEIVGARLMRHRMRALKYSKHTIRDVSELIRLHMRFHGFSEG 378 Query 361 KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL 420 +WTDSAVRRYVTDAG LLPRLHKLVRADCTTRNK++A RLQ +YD LE+RIA++AA+EDL Sbjct 379 EWTDSAVRRYVTDAGDLLPRLHKLVRADCTTRNKKKAERLQKTYDHLEDRIADIAAKEDL 438 Query 421 DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWW 474 +VRPDLDGN+IM +LDI AGPQVG+AW++LKELRLERGPL E+A EL WW Sbjct 439 AKVRPDLDGNEIMEILDIKAGPQVGQAWKFLKELRLERGPLEREDAILELKKWW 492 >gi|331700374|ref|YP_004336613.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Pseudonocardia dioxanivorans CB1190] gi|326955063|gb|AEA28760.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Pseudonocardia dioxanivorans CB1190] Length=545 Score = 617 bits (1592), Expect = 1e-174, Method: Compositional matrix adjust. Identities = 319/474 (68%), Positives = 367/474 (78%), Gaps = 12/474 (2%) Query 9 DLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSP---DLDFTTDAR 65 DLL AVA ELG F AAGH LYLVGGSVRDALLGR + DLDFTTDAR Sbjct 79 DLLAIPAVA--------DELGERFRAAGHVLYLVGGSVRDALLGRGAAAGGDLDFTTDAR 130 Query 66 PERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLE 125 PER+QE++ WAD VWDTGI+FGT+G + DH +EITTFRAD+YDRV R+P VRFGD +E Sbjct 131 PERIQELLAGWADTVWDTGIDFGTIGARRGDHVLEITTFRADAYDRVGRNPIVRFGDSIE 190 Query 126 GDLVRRDFTTNAMAVRVTAT-GPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLR 184 GDLVRRDFT NAMAV V A G F+DP GGLAAL A LDTPA P SF DDPLRMLR Sbjct 191 GDLVRRDFTVNAMAVEVHAPDGQRRFVDPHGGLAALAAGTLDTPATPQESFADDPLRMLR 250 Query 185 AARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGM 244 ARFVSQLGFA APRV A+ MA +LARI+ ERV AE KL++G P I+LMV +G+ Sbjct 251 GARFVSQLGFAPAPRVVEAMTAMAGELARITKERVQAEFSKLILGAHPRRAIELMVDTGL 310 Query 245 GAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPA 304 +V+PE+ MR+AIDEH QHKDVY HSL VL QAI E DGPDLVLR AALLHD+GKP Sbjct 311 AELVVPEVPAMRLAIDEHMQHKDVYTHSLVVLEQAIEREQDGPDLVLRLAALLHDVGKPD 370 Query 305 TRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTD 364 TRR EPDG VSFHHHEVVGAKMVR+R+R L+Y K ++D+++QLV+LHLRFHGYG+G+WTD Sbjct 371 TRRKEPDGRVSFHHHEVVGAKMVRRRLRELRYPKVVVDEVAQLVFLHLRFHGYGNGEWTD 430 Query 365 SAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVR 424 SAVRRYVTDAG LL RLHKLVR+DCTTRN+RRAA LQ SYD LEERIA L QE+LD +R Sbjct 431 SAVRRYVTDAGPLLDRLHKLVRSDCTTRNRRRAAALQRSYDSLEERIAALREQEELDSIR 490 Query 425 PDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 PDLDGN IM +L + GP VG+A+++L LR+ERGPLS EEA EL +W G Sbjct 491 PDLDGNAIMQLLGLRPGPLVGKAYKHLLALRMERGPLSHEEAEAELRAWAAENG 544 >gi|25029484|ref|NP_739538.1| putative tRNA nucleotidyltransferase [Corynebacterium efficiens YS-314] gi|259508336|ref|ZP_05751236.1| polyA polymerase [Corynebacterium efficiens YS-314] gi|23494773|dbj|BAC19738.1| putative tRNA nucleotidyltransferase [Corynebacterium efficiens YS-314] gi|259164070|gb|EEW48624.1| polyA polymerase [Corynebacterium efficiens YS-314] Length=489 Score = 617 bits (1592), Expect = 1e-174, Method: Compositional matrix adjust. Identities = 303/466 (66%), Positives = 360/466 (78%), Gaps = 1/466 (0%) Query 10 LLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPERV 69 L+ A A+ + +L L + F GH LYLVGGSVRDA LG L DLDFTT A PE Sbjct 20 LMARAHQAVGELSPILTPLAAAFTEQGHSLYLVGGSVRDAFLGTLGNDLDFTTSAPPEIT 79 Query 70 QEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLV 129 + I+ +A+ VWDTGI FGT+ K ++EITTFR+D YD SR+PEV FGD L+GDL+ Sbjct 80 RAILDDYAEVVWDTGIAFGTLSAEKHGQQIEITTFRSDVYDGTSRNPEVTFGDTLDGDLI 139 Query 130 RRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFV 189 RRDF NAMAV + G F DP+GGL L + LDTPAAP SF DDPLRMLRAARFV Sbjct 140 RRDFKVNAMAVEIAGDGTLSFHDPVGGLDDLLHRRLDTPAAPEQSFNDDPLRMLRAARFV 199 Query 190 SQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVL 249 SQLGF VA V A+ EMA Q++RI+AERV ELDKL++G P GIDLMV +G+ V+ Sbjct 200 SQLGFTVADCVVTAMTEMAGQISRITAERVQVELDKLMLGAHPEEGIDLMVDTGIAEVIF 259 Query 250 PEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHE 309 PEI M+M DEH QHKDVY+HSL V+RQ+I E + PDLVLRWAALLHD GKP TR Sbjct 260 PEIPAMQMTQDEHMQHKDVYRHSLQVMRQSIDQETE-PDLVLRWAALLHDCGKPDTREFN 318 Query 310 PDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRR 369 DG VSFH HEVVGAK+VR+RMR LKYSKQM++D+SQLV+LH+RFHG+G+G+WTDSAVRR Sbjct 319 EDGRVSFHQHEVVGAKLVRRRMRKLKYSKQMVNDVSQLVFLHMRFHGFGEGQWTDSAVRR 378 Query 370 YVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDG 429 YV DAG LLPRLHKLVRADCTTRNKR+A RLQA+YD LEERIA++AA+EDL RVRPDLDG Sbjct 379 YVADAGELLPRLHKLVRADCTTRNKRKAQRLQATYDHLEERIADIAAREDLARVRPDLDG 438 Query 430 NQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWK 475 N+IM +L+IPAGPQVG+AW +LKELRLERGPL ++A EL +WW+ Sbjct 439 NEIMEILNIPAGPQVGKAWSFLKELRLERGPLERDDAIAELKAWWE 484 >gi|21325858|dbj|BAC00479.1| tRNA nucleotidyltransferase/poly(A) polymerase [Corynebacterium glutamicum ATCC 13032] Length=440 Score = 615 bits (1585), Expect = 6e-174, Method: Compositional matrix adjust. Identities = 295/439 (68%), Positives = 345/439 (79%), Gaps = 0/439 (0%) Query 41 LVGGSVRDALLGRLSPDLDFTTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRME 100 +VGGSVRDA LG L DLDFTT ARPE + I+ +AD VWDTGI FGT+ K ++E Sbjct 1 MVGGSVRDAFLGELGHDLDFTTSARPEETKAILDDYADVVWDTGIAFGTLSAEKHGQQIE 60 Query 101 ITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAAL 160 ITTFR+D YD SR+PEV FGD LEGDL+RRDF NAMAV + A G F DP+GGL L Sbjct 61 ITTFRSDLYDGNSRNPEVTFGDTLEGDLIRRDFKVNAMAVEIQADGELTFHDPVGGLEDL 120 Query 161 RAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVA 220 LDTPA P SF DDPLRMLRAARFVSQL F +APRV A+ EMA Q+ RI+ ER+ Sbjct 121 LTHTLDTPATPEQSFNDDPLRMLRAARFVSQLNFTLAPRVITAMTEMAQQITRITVERMQ 180 Query 221 AELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAI 280 ELDK+++G++P AGIDLMV+SG+ ++ PEI M+M DEH QHKDVY HSL V+RQAI Sbjct 181 VELDKMILGKNPEAGIDLMVESGIAQIIYPEIPAMQMTQDEHMQHKDVYAHSLQVMRQAI 240 Query 281 ALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQM 340 E+DGPDLVLRWAALLHD GKP TR +G VSFH HEVVGAK+VR+RMR LKYSKQM Sbjct 241 DQEEDGPDLVLRWAALLHDCGKPDTRDFNEEGRVSFHQHEVVGAKLVRRRMRKLKYSKQM 300 Query 341 IDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARL 400 + D+ QLV+LH+RFHG+ +G+WTDSAVRRY DAG LLPRLHKLVRADCTTRNKR+AARL Sbjct 301 VGDVGQLVFLHMRFHGFSEGQWTDSAVRRYAADAGELLPRLHKLVRADCTTRNKRKAARL 360 Query 401 QASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGP 460 QA+YD LEERIAE+AA+EDL RVRPDLDGN+IM +L+I AGP+VG+AW +LKELRLERGP Sbjct 361 QATYDHLEERIAEIAAKEDLARVRPDLDGNEIMEILNIQAGPEVGKAWAFLKELRLERGP 420 Query 461 LSTEEATTELLSWWKSRGN 479 L E A EL SWW+ N Sbjct 421 LDREVAIAELKSWWEGENN 439 >gi|256381055|ref|YP_003104715.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Actinosynnema mirum DSM 43827] gi|255925358|gb|ACU40869.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Actinosynnema mirum DSM 43827] Length=502 Score = 614 bits (1584), Expect = 8e-174, Method: Compositional matrix adjust. Identities = 312/457 (69%), Positives = 361/457 (79%), Gaps = 8/457 (1%) Query 27 ELGSVFAAAGHELYLVGGSVRDALLGRLSP---DLDFTTDARPERVQEIVRPWADAVWDT 83 EL + FA AGH LYLVGGSVRDALLGR S DLDFTTDARPE++Q ++ WAD +WDT Sbjct 12 ELAARFAEAGHRLYLVGGSVRDALLGRSSGGDFDLDFTTDARPEQIQRLLSGWADGLWDT 71 Query 84 GIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143 GI FGTVG K +EITTFRADSYD V+R+PEV FGD +EGDLVRRDFT NAMA V Sbjct 72 GIAFGTVGATKHGRTVEITTFRADSYDGVTRNPEVTFGDTVEGDLVRRDFTVNAMAFDVA 131 Query 144 ATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVRAA 203 A E +DP GG AL A VLDTPA P SFGDDPLRMLRAARFVSQ+GF A RV A Sbjct 132 AR---ELIDPTGGREALAAMVLDTPATPQQSFGDDPLRMLRAARFVSQIGFTPADRVVEA 188 Query 204 IEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMRMAIDEHH 263 + MA +L RI+ ERV EL KLL G P G++L +G+ AVVLPE+ MR+ IDEHH Sbjct 189 MTAMAGELERITPERVQQELSKLLCGAHPRRGVELFESTGLAAVVLPELPAMRLEIDEHH 248 Query 264 QHKDVYQHSLTVLRQAIALED--DGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEV 321 QHKDV+ HSL VL+QAI LED + PDLVLR AALLHDIGKP TRR E GGVSFHHHEV Sbjct 249 QHKDVFDHSLVVLQQAIDLEDEDNSPDLVLRLAALLHDIGKPGTRRFESGGGVSFHHHEV 308 Query 322 VGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGALLPRL 381 +GAKMVRKR+RAL+YSK+++++++QLVYLHLRFHGYG+G+WTDSAVRRY TDAG LL RL Sbjct 309 LGAKMVRKRLRALRYSKEVVEEVAQLVYLHLRFHGYGNGEWTDSAVRRYATDAGPLLSRL 368 Query 382 HKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVLDIPAG 441 HKLVRADCTTRNKR+A LQ +YD LEERI LAA+EDL RVRPDLDGN+IM +L +P G Sbjct 369 HKLVRADCTTRNKRKANALQRTYDGLEERIDRLAAEEDLRRVRPDLDGNEIMRLLGLPPG 428 Query 442 PQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRG 478 PQVG AW++LKELRL+RGPL +EA ELL+W ++ G Sbjct 429 PQVGRAWKFLKELRLDRGPLDRDEAEVELLAWARAEG 465 >gi|300859512|ref|YP_003784495.1| tRNA nucleotidyltransferase [Corynebacterium pseudotuberculosis FRC41] gi|300686966|gb|ADK29888.1| tRNA nucleotidyltransferase [Corynebacterium pseudotuberculosis FRC41] gi|302207195|gb|ADL11537.1| tRNA nucleotidyltransferase [Corynebacterium pseudotuberculosis C231] gi|302331756|gb|ADL21950.1| tRNA nucleotidyltransferase [Corynebacterium pseudotuberculosis 1002] gi|308277448|gb|ADO27347.1| tRNA nucleotidyltransferase [Corynebacterium pseudotuberculosis I19] gi|341825887|gb|AEK93408.1| tRNA nucleotidyltransferase [Corynebacterium pseudotuberculosis PAT10] Length=533 Score = 613 bits (1581), Expect = 2e-173, Method: Compositional matrix adjust. Identities = 301/472 (64%), Positives = 359/472 (77%), Gaps = 1/472 (0%) Query 9 DLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDFTTDARPER 68 +LL A L + LL L +F GH LYLVGGSVRDALL L DLDFTTDARPE Sbjct 54 ELLARAQKTLADLSPLLAPLAQLFQKRGHRLYLVGGSVRDALLDELGNDLDFTTDARPET 113 Query 69 VQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDL 128 V EI+ + VWDTGIEFGTV K ++EITTFR+D YD +R+PEV+FGD LEGDL Sbjct 114 VMEILNDYTSVVWDTGIEFGTVSAEKDGQQIEITTFRSDVYDGKTRNPEVQFGDSLEGDL 173 Query 129 VRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARF 188 +RRDF NAMAV V TG F DP+ G+ L KVLDTP+ P SF DDPLRMLRAARF Sbjct 174 IRRDFRVNAMAVEVHPTGEMTFHDPVKGMDDLVKKVLDTPSLPEQSFNDDPLRMLRAARF 233 Query 189 VSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVV 248 VSQL F+VA RV A+ +MA Q+ RI+ ER+ ELDKLL G P GIDLMV +G+ + Sbjct 234 VSQLEFSVADRVDNAMTQMADQIDRITVERIQVELDKLLCGRAPWDGIDLMVDTGLAERI 293 Query 249 LPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRH 308 +PEI +R+ DEH QHKDVY HSLTVLRQA+ E+DGPD+VLRWA+L+HD GKP TR Sbjct 294 IPEIPALRLTQDEHRQHKDVYLHSLTVLRQAMEQEEDGPDVVLRWASLMHDCGKPDTRAF 353 Query 309 EPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVR 368 +G VSFHHHE+VGA+++R RMRALKYSKQM++D+S L+ LH+RFHG+ +G+WTDSAVR Sbjct 354 TDEGKVSFHHHEIVGARIMRARMRALKYSKQMVNDVSDLIRLHMRFHGFSEGEWTDSAVR 413 Query 369 RYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLD 428 RYVTDAG LL +LHKLVRADCTTRNK++AARLQ +YD LEERIAE+A +EDL RVRPDLD Sbjct 414 RYVTDAGPLLSKLHKLVRADCTTRNKKKAARLQRTYDHLEERIAEIAEREDLQRVRPDLD 473 Query 429 GNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWW-KSRGN 479 GN+IM +LD+ GP VG AW +LKELRLERGPL +EEA EL +WW +S N Sbjct 474 GNEIMKILDLQPGPDVGRAWSFLKELRLERGPLPSEEAIAELKAWWLQSHSN 525 Lambda K H 0.321 0.136 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1017007352256 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40