BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3909

Length=802
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15611045|ref|NP_218426.1|  hypothetical protein Rv3909 [Mycoba...  1563    0.0   
gi|344221749|gb|AEN02380.1|  hypothetical protein MTCTRI2_3988 [M...  1562    0.0   
gi|308375031|ref|ZP_07442431.2|  hypothetical protein TMGG_01456 ...  1561    0.0   
gi|298527381|ref|ZP_07014790.1|  conserved hypothetical protein [...  1560    0.0   
gi|289441352|ref|ZP_06431096.1|  conserved hypothetical protein [...  1558    0.0   
gi|289748447|ref|ZP_06507825.1|  conserved hypothetical protein [...  1556    0.0   
gi|121639820|ref|YP_980044.1|  hypothetical protein BCG_3966 [Myc...  1554    0.0   
gi|31795082|ref|NP_857575.1|  hypothetical protein Mb3939 [Mycoba...  1553    0.0   
gi|340628879|ref|YP_004747331.1|  hypothetical protein MCAN_39291...  1548    0.0   
gi|15843542|ref|NP_338579.1|  hypothetical protein MT4028 [Mycoba...  1490    0.0   
gi|339300306|gb|AEJ52416.1|  hypothetical protein CCDC5180_3579 [...  1285    0.0   
gi|240168389|ref|ZP_04747048.1|  hypothetical protein MkanA1_0370...  1207    0.0   
gi|296167158|ref|ZP_06849565.1|  conserved hypothetical protein [...  1191    0.0   
gi|183985443|ref|YP_001853734.1|  hypothetical protein MMAR_5473 ...  1189    0.0   
gi|41410433|ref|NP_963269.1|  hypothetical protein MAP4335 [Mycob...  1159    0.0   
gi|336459800|gb|EGO38714.1|  hypothetical protein MAPs_46910 [Myc...  1157    0.0   
gi|254777646|ref|ZP_05219162.1|  hypothetical protein MaviaA2_236...  1157    0.0   
gi|118620064|ref|YP_908396.1|  hypothetical protein MUL_5062 [Myc...  1154    0.0   
gi|342862337|ref|ZP_08718978.1|  hypothetical protein MCOL_25723 ...  1149    0.0   
gi|254823063|ref|ZP_05228064.1|  hypothetical protein MintA_24255...  1147    0.0   
gi|15828459|ref|NP_302722.1|  hypothetical protein [Mycobacterium...  1073    0.0   
gi|333992973|ref|YP_004525587.1|  hypothetical protein JDM601_433...   941    0.0   
gi|120406992|ref|YP_956821.1|  hypothetical protein Mvan_6063 [My...   921    0.0   
gi|145221437|ref|YP_001132115.1|  hypothetical protein Mflv_0843 ...   902    0.0   
gi|315446811|ref|YP_004079690.1|  hypothetical protein Mspyr1_533...   902    0.0   
gi|108802358|ref|YP_642555.1|  hypothetical protein Mmcs_5399 [My...   898    0.0   
gi|126438338|ref|YP_001074029.1|  hypothetical protein Mjls_5775 ...   897    0.0   
gi|118472256|ref|YP_891122.1|  hypothetical protein MSMEG_6928 [M...   884    0.0   
gi|169632009|ref|YP_001705658.1|  hypothetical protein MAB_4936 [...   771    0.0   
gi|886312|gb|AAB53128.1|  L222-ORF8; putative [Mycobacterium leprae]   677    0.0   
gi|111020632|ref|YP_703604.1|  glycoprotein [Rhodococcus jostii R...   581    1e-163
gi|325677329|ref|ZP_08156994.1|  glycoprotein [Rhodococcus equi A...   568    1e-159
gi|312142008|ref|YP_004009344.1|  integral membrane protein [Rhod...   566    5e-159
gi|226362875|ref|YP_002780655.1|  hypothetical protein ROP_34630 ...   553    4e-155
gi|226309499|ref|YP_002769461.1|  hypothetical protein RER_60140 ...   536    8e-150
gi|229491222|ref|ZP_04385050.1|  conserved hypothetical protein [...   535    1e-149
gi|54027632|ref|YP_121874.1|  hypothetical protein nfa56580 [Noca...   471    2e-130
gi|343928712|ref|ZP_08768157.1|  hypothetical protein GOALK_120_0...   434    3e-119
gi|333922221|ref|YP_004495802.1|  glycoprotein [Amycolicicoccus s...   423    6e-116
gi|296141889|ref|YP_003649132.1|  glycoprotein [Tsukamurella paur...   422    1e-115
gi|326383890|ref|ZP_08205574.1|  hypothetical protein SCNU_13193 ...   421    4e-115
gi|262204640|ref|YP_003275848.1|  hypothetical protein Gbro_4842 ...   381    3e-103
gi|886311|gb|AAB53127.1|  L222-ORF7; putative [Mycobacterium leprae]   345    3e-92 
gi|317509434|ref|ZP_07967052.1|  collagen alpha-2(I) protein [Seg...   322    2e-85 
gi|296392449|ref|YP_003657333.1|  glycoprotein [Segniliparus rotu...   305    2e-80 
gi|256381057|ref|YP_003104717.1|  hypothetical protein Amir_7081 ...   279    2e-72 
gi|331700376|ref|YP_004336615.1|  hypothetical protein Psed_6674 ...   271    3e-70 
gi|257057898|ref|YP_003135730.1|  hypothetical protein Svir_39620...   241    4e-61 
gi|134103799|ref|YP_001109460.1|  glycoprotein [Saccharopolyspora...   238    4e-60 
gi|302531339|ref|ZP_07283681.1|  predicted protein [Streptomyces ...   232    2e-58 


>gi|15611045|ref|NP_218426.1| hypothetical protein Rv3909 [Mycobacterium tuberculosis H37Rv]
 gi|148663776|ref|YP_001285299.1| hypothetical protein MRA_3948 [Mycobacterium tuberculosis H37Ra]
 gi|148825117|ref|YP_001289871.1| hypothetical protein TBFG_13944 [Mycobacterium tuberculosis F11]
 38 more sequence titles
 Length=802

 Score = 1563 bits (4047),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 801/802 (99%), Positives = 802/802 (100%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|344221749|gb|AEN02380.1| hypothetical protein MTCTRI2_3988 [Mycobacterium tuberculosis 
CTRI-2]
Length=802

 Score = 1562 bits (4044),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 800/802 (99%), Positives = 802/802 (100%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVM+RLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMLRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|308375031|ref|ZP_07442431.2| hypothetical protein TMGG_01456 [Mycobacterium tuberculosis SUMu007]
 gi|308347659|gb|EFP36510.1| hypothetical protein TMGG_01456 [Mycobacterium tuberculosis SUMu007]
Length=802

 Score = 1561 bits (4041),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 800/802 (99%), Positives = 802/802 (100%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TAL+LGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALRLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|298527381|ref|ZP_07014790.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497175|gb|EFI32469.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=802

 Score = 1560 bits (4040),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 800/802 (99%), Positives = 801/802 (99%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSP GA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPHGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|289441352|ref|ZP_06431096.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289445510|ref|ZP_06435254.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289567865|ref|ZP_06448092.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 9 more sequence titles
 Length=802

 Score = 1558 bits (4033),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 799/802 (99%), Positives = 801/802 (99%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQL WAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLRWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHG+TVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGSTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|289748447|ref|ZP_06507825.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689034|gb|EFD56463.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=802

 Score = 1556 bits (4029),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 798/802 (99%), Positives = 800/802 (99%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQL WAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLRWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAIN LSTHG+TVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINFLSTHGSTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|121639820|ref|YP_980044.1| hypothetical protein BCG_3966 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224992315|ref|YP_002647005.1| hypothetical protein JTY_3968 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121495468|emb|CAL73956.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224775431|dbj|BAH28237.1| hypothetical protein JTY_3968 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341603841|emb|CCC66523.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=802

 Score = 1554 bits (4024),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 798/802 (99%), Positives = 800/802 (99%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQL WAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLRWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHG+TVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGSTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLP VI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPVVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|31795082|ref|NP_857575.1| hypothetical protein Mb3939 [Mycobacterium bovis AF2122/97]
 gi|31620680|emb|CAD96125.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
Length=802

 Score = 1553 bits (4020),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 797/802 (99%), Positives = 799/802 (99%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQL WAALARVTSAIGVVAGL MALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLRWAALARVTSAIGVVAGLAMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHG+TVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGSTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLP VI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPVVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHAPQRRAVASRDDEKHRV
Sbjct  781  PTGKHAPQRRAVASRDDEKHRV  802


>gi|340628879|ref|YP_004747331.1| hypothetical protein MCAN_39291 [Mycobacterium canettii CIPT 
140010059]
 gi|340007069|emb|CCC46260.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=802

 Score = 1548 bits (4007),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 795/802 (99%), Positives = 798/802 (99%), Gaps = 0/802 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TALQL WAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV
Sbjct  1    MTALQLRWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT
Sbjct  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS
Sbjct  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA
Sbjct  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI
Sbjct  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHG+TVAVAAADFSPEEQQGSSQIG
Sbjct  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGSTVAVAAADFSPEEQQGSSQIG  420

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVP+YLDPSLFVRIAHESITARRQ
Sbjct  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPSYLDPSLFVRIAHESITARRQ  480

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI
Sbjct  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALT DDRTGLTGVQYTA
Sbjct  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTTDDRTGLTGVQYTA  600

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP
Sbjct  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT
Sbjct  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPD 
Sbjct  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDP  780

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            PTGKHA QRRAVASRDDEKHRV
Sbjct  781  PTGKHAQQRRAVASRDDEKHRV  802


>gi|15843542|ref|NP_338579.1| hypothetical protein MT4028 [Mycobacterium tuberculosis CDC1551]
 gi|13883919|gb|AAK48393.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=818

 Score = 1490 bits (3857),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 763/763 (100%), Positives = 763/763 (100%), Gaps = 0/763 (0%)

Query  40   GEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSST  99
            GEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSST
Sbjct  56   GEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSST  115

Query  100  ALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLV  159
            ALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLV
Sbjct  116  ALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLV  175

Query  160  NVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRL  219
            NVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRL
Sbjct  176  NVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRL  235

Query  220  APGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPD  279
            APGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPD
Sbjct  236  APGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPD  295

Query  280  LLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFA  339
            LLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFA
Sbjct  296  LLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFA  355

Query  340  QADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGN  399
            QADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGN
Sbjct  356  QADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGN  415

Query  400  TVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVP  459
            TVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVP
Sbjct  416  TVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVP  475

Query  460  TYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVIL  519
            TYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVIL
Sbjct  476  TYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVIL  535

Query  520  TALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLW  579
            TALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLW
Sbjct  536  TALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLW  595

Query  580  KLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFG  639
            KLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFG
Sbjct  596  KLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFG  655

Query  640  AVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLP  699
            AVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLP
Sbjct  656  AVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLP  715

Query  700  LRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAG  759
            LRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAG
Sbjct  716  LRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAG  775

Query  760  RRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKHRV  802
            RRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKHRV
Sbjct  776  RRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKHRV  818


>gi|339300306|gb|AEJ52416.1| hypothetical protein CCDC5180_3579 [Mycobacterium tuberculosis 
CCDC5180]
Length=656

 Score = 1285 bits (3324),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 655/656 (99%), Positives = 656/656 (100%), Gaps = 0/656 (0%)

Query  147  LAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVW  206
            +AVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVW
Sbjct  1    MAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVW  60

Query  207  ITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDG  266
            ITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDG
Sbjct  61   ITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDG  120

Query  267  AVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRT  326
            AVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRT
Sbjct  121  AVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRT  180

Query  327  LVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPL  386
            LVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPL
Sbjct  181  LVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPL  240

Query  387  TGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVG  446
            TGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVG
Sbjct  241  TGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVG  300

Query  447  AALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPA  506
            AALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPA
Sbjct  301  AALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPA  360

Query  507  SWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDD  566
            SWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDD
Sbjct  361  SWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDD  420

Query  567  ITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQR  626
            ITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQR
Sbjct  421  ITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQR  480

Query  627  LAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVA  686
            LAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVA
Sbjct  481  LAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVA  540

Query  687  DVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAI  746
            DVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAI
Sbjct  541  DVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAI  600

Query  747  TLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKHRV  802
            TLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKHRV
Sbjct  601  TLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKHRV  656


>gi|240168389|ref|ZP_04747048.1| hypothetical protein MkanA1_03702 [Mycobacterium kansasii ATCC 
12478]
Length=803

 Score = 1207 bits (3122),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 641/808 (80%), Positives = 706/808 (88%), Gaps = 11/808 (1%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TAL++ WA L R+ + IG+VAG    L     AP A AGEP+PTPFVQVRIDQVTPDVV
Sbjct  1    MTALRVPWAGLWRLAAVIGIVAGFTGVL----HAPRATAGEPTPTPFVQVRIDQVTPDVV  56

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TT+S+P VTVSGTVTN GDRPVRDVMVRLEHA  VTSS ALRTSLDG TDQYQPAADF+T
Sbjct  57   TTTSDPVVTVSGTVTNIGDRPVRDVMVRLEHAGTVTSSAALRTSLDGSTDQYQPAADFVT  116

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPEL RGQ AGFTLSAPLRSLT+PSL ++QPGI+P+LVNVNGTPDYGAPARLDNARFLL
Sbjct  117  VAPELQRGQGAGFTLSAPLRSLTKPSLTIDQPGIFPILVNVNGTPDYGAPARLDNARFLL  176

Query  181  PVVGVPPDQ---ATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDL  237
            PVVGVPPD+   AT F +AVAPETT PVWITMLWPLADRPRLAPG PGGT+PVRLVDDDL
Sbjct  177  PVVGVPPDKSDRATGFDTAVAPETTKPVWITMLWPLADRPRLAPGVPGGTIPVRLVDDDL  236

Query  238  ANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSP  297
            ANSLANGGRLD LLSAAE AT+R+VDP+GAV RALCLA+DPDLL+TVNAMT GYVVSDSP
Sbjct  237  ANSLANGGRLDTLLSAAELATSRDVDPEGAVTRALCLAVDPDLLVTVNAMTAGYVVSDSP  296

Query  298  DGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAI  357
            DG  QLPGTPTHPGTGQAAA+ WL+RLR L HRTCV PLP+AQADLDALQRVND  LS I
Sbjct  297  DGPGQLPGTPTHPGTGQAAATIWLNRLRALAHRTCVAPLPYAQADLDALQRVNDAGLSTI  356

Query  358  ATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSS  417
            AT+S ADIVD+ILD++S RGAT++PDGPLT RA++LLS +   VA+AAADF+  +   ++
Sbjct  357  ATVSAADIVDKILDINSVRGATLMPDGPLTRRAVDLLSANDGMVAIAAADFAAPDMSETA  416

Query  418  QIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITA  477
            Q  SA    T PRRLSP++VAAPFDPAVGAALAAAG NP VPTYLD SL V I+H+S TA
Sbjct  417  QGTSANADIT-PRRLSPQLVAAPFDPAVGAALAAAGANPIVPTYLDSSLSVHISHDSATA  475

Query  478  RRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLP  537
            RRQDALGA+LWRSL P+AAPRTQILVPPA+W+L  DDAQ ILTALAT I +GLAVPRPLP
Sbjct  476  RRQDALGALLWRSLYPDAAPRTQILVPPATWNLQGDDAQSILTALATTIHAGLAVPRPLP  535

Query  538  AVIADAAARTEPPEPPGAYS---AARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLT  594
            A+IADAAA TEPP+P G  +    ARGRF DDIT QI GQV RLWKLT+ALT DDRTGLT
Sbjct  536  ALIADAAAHTEPPQPLGTEANPATARGRFGDDITAQIAGQVGRLWKLTAALTTDDRTGLT  595

Query  595  GVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLAT  654
            GVQYTAPLREDMLRALSQS+PPDTRNGLAQQRLAVVG TI+D FGAVTIVNPGGSYTLAT
Sbjct  596  GVQYTAPLREDMLRALSQSVPPDTRNGLAQQRLAVVGNTINDFFGAVTIVNPGGSYTLAT  655

Query  655  EHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAV  714
            EHSPLPLALHNGLAVPIRV+LQVDAPPGMTV DVGQIELPPGYLPLRVPIEVNFTQRVA+
Sbjct  656  EHSPLPLALHNGLAVPIRVKLQVDAPPGMTVTDVGQIELPPGYLPLRVPIEVNFTQRVAI  715

Query  715  DVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRAD  774
            DV+L+TPDG+ALGEPVRLSVHSNAYGKVLFAITL+AAAVLVTLAGRRLWHRFRGQPDRAD
Sbjct  716  DVALKTPDGMALGEPVRLSVHSNAYGKVLFAITLTAAAVLVTLAGRRLWHRFRGQPDRAD  775

Query  775  LDRPDLPTGKHAPQRRAVASRDDEKHRV  802
            LDRPD P+ +H  Q  A   R +E+HRV
Sbjct  776  LDRPDPPSARHTQQVGAPDRRVEEEHRV  803


>gi|296167158|ref|ZP_06849565.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897480|gb|EFG77079.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=793

 Score = 1191 bits (3082),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 625/793 (79%), Positives = 684/793 (87%), Gaps = 6/793 (0%)

Query  10   ALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVT  69
             L R+ + IG+VAG  + LT P  AP A AGEP  TPFV+VRIDQVTPDVVTTSS+P VT
Sbjct  7    CLLRLAAVIGIVAGFAV-LTGP-VAPRAAAGEPGVTPFVRVRIDQVTPDVVTTSSQPVVT  64

Query  70   VSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQ  129
            VSG VTN GDRPVRDVMVRLEHA AVT+ST LRT+LDG TDQYQPAADFLTVAPEL RGQ
Sbjct  65   VSGMVTNIGDRPVRDVMVRLEHAGAVTASTGLRTTLDGDTDQYQPAADFLTVAPELQRGQ  124

Query  130  EAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQ  189
            EAGFTLSAPLRSLT+ SL V +PGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQ
Sbjct  125  EAGFTLSAPLRSLTKQSLGVEKPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQ  184

Query  190  ATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDI  249
              D  SAVAP+T+ PVWITMLWPLADRPRLAPG PGGT+PVRLVDD+LA SLA GGRLDI
Sbjct  185  GGDLSSAVAPDTSKPVWITMLWPLADRPRLAPGVPGGTIPVRLVDDELATSLAGGGRLDI  244

Query  250  LLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTH  309
            LLSAAE AT+ +VDPDGAVGRALCLA+DPDLL+TVNAMT GYVVSDSPDG AQLPGTPTH
Sbjct  245  LLSAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGPAQLPGTPTH  304

Query  310  PGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRI  369
            PG GQAAA  WLDRLR L  RTCV PLP+AQADLDALQRVND  LSA AT     IVDRI
Sbjct  305  PGAGQAAAVEWLDRLRALAQRTCVVPLPYAQADLDALQRVNDRGLSAAATTGVNSIVDRI  364

Query  370  LDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAP  429
            LDV+S RGAT+LPDGPLT RA++LL  + +TVAVAAAD S  + +GSS+        TAP
Sbjct  365  LDVASVRGATLLPDGPLTNRAVSLLGANQSTVAVAAADLSAPDARGSSETTV----DTAP  420

Query  430  RRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWR  489
            RRLSP+VV APFDPAVGAALA AG++P  PTYLDPSL VR+AH+S+TARRQDALG+M W 
Sbjct  421  RRLSPQVVVAPFDPAVGAALAGAGSSPAAPTYLDPSLTVRLAHDSVTARRQDALGSMFWH  480

Query  490  SLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEP  549
            +L  + APRTQ+LVPPA+W+L +DDA VILTAL T+IRSGLAV RPLPAVIADAAART+P
Sbjct  481  ALRRDDAPRTQLLVPPATWNLQADDAHVILTALTTSIRSGLAVSRPLPAVIADAAARTDP  540

Query  550  PEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRA  609
             +PPG Y++ARGRF DD+T  I GQV RLW LTSAL+ D+RTGLTG  YTAPLREDMLRA
Sbjct  541  SQPPGTYTSARGRFGDDVTAAIAGQVGRLWGLTSALSTDERTGLTGFAYTAPLREDMLRA  600

Query  610  LSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAV  669
            LSQS PPDTRNGLAQQRLAVVGKTI+DLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAV
Sbjct  601  LSQSEPPDTRNGLAQQRLAVVGKTINDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAV  660

Query  670  PIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEP  729
            PIRVRLQVDAPPGM+V DVGQIELPPGYLPLRVPIEVNFTQRVA+DVSLRTPDG+ LGEP
Sbjct  661  PIRVRLQVDAPPGMSVTDVGQIELPPGYLPLRVPIEVNFTQRVAIDVSLRTPDGMRLGEP  720

Query  730  VRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQR  789
            VRLSVHSNAYGKVLFAIT++AAAVLV LAGRRLWHRFRGQPDRADLDRPD P  +HA   
Sbjct  721  VRLSVHSNAYGKVLFAITMTAAAVLVLLAGRRLWHRFRGQPDRADLDRPDPPHPRHADAH  780

Query  790  RAVASRDDEKHRV  802
                 R +++HRV
Sbjct  781  DRADHRVEQEHRV  793


>gi|183985443|ref|YP_001853734.1| hypothetical protein MMAR_5473 [Mycobacterium marinum M]
 gi|183178769|gb|ACC43879.1| conserved hypothetical secreted protein [Mycobacterium marinum 
M]
Length=793

 Score = 1189 bits (3077),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 632/802 (79%), Positives = 692/802 (87%), Gaps = 9/802 (1%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TAL+L W+ + R+ + IG+VAG  + LT P AAP A AGEP  TPFVQVRIDQVTPD+V
Sbjct  1    MTALRLPWSGMWRLAAVIGIVAGFAVVLTAP-AAPRASAGEPGATPFVQVRIDQVTPDLV  59

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TT+S+P +TVSG VTN GDRPVRDVMVRLEHAAAVTSS+ALRTSLDG TDQYQPAADFLT
Sbjct  60   TTTSDPVITVSGMVTNIGDRPVRDVMVRLEHAAAVTSSSALRTSLDGSTDQYQPAADFLT  119

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            V+ EL RGQ+ GFTLSAPLRSLT+PSL+++ PGI+PVLVNVNGTPDYGAPARLDNARFLL
Sbjct  120  VSSELRRGQQVGFTLSAPLRSLTKPSLSIDGPGIFPVLVNVNGTPDYGAPARLDNARFLL  179

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPD+  DF + V PET  PVWITMLWPLADRPRLAPG PGGT+PVRL+DDDLANS
Sbjct  180  PVVGVPPDRDADFDAPVTPETDKPVWITMLWPLADRPRLAPGVPGGTIPVRLIDDDLANS  239

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LA+GGRLD LLSAAE AT+R+VDP+G V R++CLA+DPDLL+TVNAMT GYVVSDSPDG 
Sbjct  240  LASGGRLDTLLSAAELATSRDVDPEGTVTRSICLAVDPDLLVTVNAMTAGYVVSDSPDGP  299

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQAAA+ WLDRLRTL  RTCV  LP+AQADLDALQRVNDPRLS IA I
Sbjct  300  AQLPGTPTHPGTGQAAANIWLDRLRTLARRTCVVTLPYAQADLDALQRVNDPRLSNIAVI  359

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            S ADIVDRILDV S RGA VLPDGPLT RA++LL+  G  V VAAADFS       +  G
Sbjct  360  SAADIVDRILDVKSVRGAAVLPDGPLTSRAVDLLNADGGMVTVAAADFSAH----VAAEG  415

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
                  TAPRRLS  VVAAPFDPAVGAALAA G+NPTVPTYLD SL V IAH+S TARRQ
Sbjct  416  GRATADTAPRRLSAEVVAAPFDPAVGAALAATGSNPTVPTYLDSSLSVHIAHDSPTARRQ  475

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALGAMLWRSL   AAPRTQILVPP +W L SDDAQ+ILTALAT I SGLAVPRPL A+I
Sbjct  476  DALGAMLWRSLWGEAAPRTQILVPPTTWDLHSDDAQLILTALATTIHSGLAVPRPLSALI  535

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ++AAA TEPPEPPG Y +ARGRF+DD+T QI  Q  RLWKLTSA+T DDRTGLTG QYTA
Sbjct  536  SEAAAHTEPPEPPGPYPSARGRFDDDVTAQISDQSGRLWKLTSAMTTDDRTGLTGAQYTA  595

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQS+PPDTRNGLAQQRLAVVG TI+D FGAVTIVNPGGSYTLATEHSPLP
Sbjct  596  PLREDMLRALSQSVPPDTRNGLAQQRLAVVGNTINDFFGAVTIVNPGGSYTLATEHSPLP  655

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTV D+G+IELPPGYLP+RVPIEVNFTQRVA+DV+L T
Sbjct  656  LALHNGLAVPIRVRLQVDAPPGMTVTDLGEIELPPGYLPIRVPIEVNFTQRVAIDVTLET  715

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            PDG+ALGEPVRLSVHSNAYGKVLFAITL+AAAVLV LAGRRLWHRFRGQPDRADLDRPD 
Sbjct  716  PDGMALGEPVRLSVHSNAYGKVLFAITLTAAAVLVALAGRRLWHRFRGQPDRADLDRPDP  775

Query  781  PTGKHAPQRRAVASRDDEKHRV  802
            P  +HA    A   R DE+HRV
Sbjct  776  PAARHA----ASGHRVDEEHRV  793


>gi|41410433|ref|NP_963269.1| hypothetical protein MAP4335 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41399267|gb|AAS06885.1| hypothetical protein MAP_4335 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=800

 Score = 1159 bits (2997),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/806 (77%), Positives = 677/806 (84%), Gaps = 10/806 (1%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TA +L WA   R+ + +GV+AGL + LT P   P A+AGEP  TPFV+VRIDQVTPDVV
Sbjct  1    MTAPRLCWAGGLRIAAVLGVLAGLAV-LTGP-VTPRAVAGEPGVTPFVRVRIDQVTPDVV  58

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TT+S P VTVSG VTN GDRPVRDVMVRLEHA  VT+S  LRTSLDG TDQYQ AADFLT
Sbjct  59   TTTSPPVVTVSGMVTNIGDRPVRDVMVRLEHAGPVTASAGLRTSLDGDTDQYQAAADFLT  118

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPEL RGQE GFTLSAPLR+LT+ SL V +PGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  119  VAPELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVNGTPDYGAPARLDNARFLL  178

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPD+A D GSAVAP+T+ PV ITMLWPLADRPRLAPG PGGT+PVRLVDDDLA S
Sbjct  179  PVVGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATS  238

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LA+GGRLDILL+AAE AT+ +VDPDGAVGRALCLA+DPDLL+TVNAMT GYVVSDSPDG 
Sbjct  239  LASGGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGP  298

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQA A+ WL+RLR L HRTCV PLP+AQADLDALQRVNDP LS  A  
Sbjct  299  AQLPGTPTHPGTGQATATEWLNRLRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALT  358

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            S   IVD+ILDV STRGAT++PDG LTGRA+ LL  +  TVAV AAD S  + QGSS+  
Sbjct  359  SVNSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVAVTAADLSAGDAQGSSETS  418

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
                  TAPRR+SP+VVAAPFDPAVGAALA AG NP VPTYLD SL VR+AH+S+TARRQ
Sbjct  419  V----DTAPRRVSPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQ  474

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALG+M W +L  +  PRTQ+LVPPA+W+L +DDAQVILTAL T+IRSGLAVPRPLPAVI
Sbjct  475  DALGSMFWHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVI  534

Query  541  ADAAARTEPPEPP----GAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGV  596
             +A    +   PP     A  +ARG+FNDD+T  I GQV RLW LTSAL  DDRTGLTGV
Sbjct  535  GEATQAAQTGAPPSDQVSADGSARGQFNDDVTGAITGQVGRLWGLTSALMTDDRTGLTGV  594

Query  597  QYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEH  656
            QYTAPLREDMLRALSQS PPD+RNGLAQQRLAVVGKTI+DLFGAVTIVNPGGSYTLATEH
Sbjct  595  QYTAPLREDMLRALSQSEPPDSRNGLAQQRLAVVGKTINDLFGAVTIVNPGGSYTLATEH  654

Query  657  SPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDV  716
            SPLPLALHNGLAVPIRVR+ VDAPPGM V DVG IELPPGYLPLR+PIEVNFTQRVAVDV
Sbjct  655  SPLPLALHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDV  714

Query  717  SLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLD  776
            +LRT DG+ LGEPVRLSVHSNAYGKVLFAITLSAAAVLV LAGRRLWHRFRGQPDRADLD
Sbjct  715  TLRTADGMRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLD  774

Query  777  RPDLPTGKHAPQRRAVASRDDEKHRV  802
            RPD P  +HA        R +++HRV
Sbjct  775  RPDPPDARHADPHDLADPRVEQEHRV  800


>gi|336459800|gb|EGO38714.1| hypothetical protein MAPs_46910 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=800

 Score = 1157 bits (2994),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 614/806 (77%), Positives = 677/806 (84%), Gaps = 10/806 (1%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TA +L WA   R+ + +GV+AGL + LT P   P A+AGEP  TPFV+VRIDQVTPDVV
Sbjct  1    MTAPRLCWAGGLRIAAVLGVLAGLAV-LTGP-VTPRAVAGEPGVTPFVRVRIDQVTPDVV  58

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TT+S P VTVSG VTN GDRPVRDVMVRLEHA  VT+S  LRTSLDG TDQYQ AADFLT
Sbjct  59   TTTSPPVVTVSGMVTNIGDRPVRDVMVRLEHAGPVTASAGLRTSLDGDTDQYQAAADFLT  118

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPEL RGQE GFTLSAPLR+LT+ SL V +PGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  119  VAPELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVNGTPDYGAPARLDNARFLL  178

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPD+A D GSAVAP+T+ PV ITMLWPLADRPRLAPG PGGT+PVRLVDDDLA S
Sbjct  179  PVVGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATS  238

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LA+GGRLDILL+AAE AT+ +VDPDGAVGRALCLA+DPDLL+TVNAMT GYVVSDSPDG 
Sbjct  239  LASGGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGP  298

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQA A+ WL+RLR L HRTCV PLP+AQADLDALQRVNDP LS  A  
Sbjct  299  AQLPGTPTHPGTGQATATEWLNRLRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALT  358

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            S   IVD+ILDV STRGAT++PDG LTGRA+ LL  +  TVAV AAD S  + QGSS+  
Sbjct  359  SVNSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVAVTAADLSAGDAQGSSETS  418

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
                  TAPRR+SP+VVAAPFDPAVGAALA AG NP VPTYLD SL VR+AH+S+TARRQ
Sbjct  419  V----DTAPRRVSPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQ  474

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALG+M W +L  +  PRTQ+LVPPA+W+L +DDAQVILTAL T+IRSGLAVPRPLPAVI
Sbjct  475  DALGSMFWHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVI  534

Query  541  ADAAARTEPPEPP----GAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGV  596
             +A    +   PP     A  +ARG+FNDD+T  I GQV RLW LTSAL  DDRTGLTGV
Sbjct  535  GEATQAAQTGAPPSDQVSADGSARGQFNDDVTGAITGQVGRLWGLTSALMTDDRTGLTGV  594

Query  597  QYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEH  656
            QYTAPLREDMLRALSQS PPD+RNGLAQQ+LAVVGKTI+DLFGAVTIVNPGGSYTLATEH
Sbjct  595  QYTAPLREDMLRALSQSEPPDSRNGLAQQQLAVVGKTINDLFGAVTIVNPGGSYTLATEH  654

Query  657  SPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDV  716
            SPLPLALHNGLAVPIRVR+ VDAPPGM V DVG IELPPGYLPLR+PIEVNFTQRVAVDV
Sbjct  655  SPLPLALHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDV  714

Query  717  SLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLD  776
            +LRT DG+ LGEPVRLSVHSNAYGKVLFAITLSAAAVLV LAGRRLWHRFRGQPDRADLD
Sbjct  715  TLRTADGMRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLD  774

Query  777  RPDLPTGKHAPQRRAVASRDDEKHRV  802
            RPD P  +HA        R +++HRV
Sbjct  775  RPDPPDARHADPHDLADPRVEQEHRV  800


>gi|254777646|ref|ZP_05219162.1| hypothetical protein MaviaA2_23656 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=800

 Score = 1157 bits (2994),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 614/806 (77%), Positives = 677/806 (84%), Gaps = 10/806 (1%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TA +L WA   R+ + +GV+AGL + LT P   P A+AGEP  TPFV+VRIDQVTPDVV
Sbjct  1    MTAPRLCWAGGLRIAAVLGVLAGLAV-LTGP-VTPRAVAGEPGVTPFVRVRIDQVTPDVV  58

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TT+S P VTVSG VTN GDRPVRDVMVRLEHA+ VT+S  LRTSLDG TDQYQ AADFLT
Sbjct  59   TTTSPPVVTVSGMVTNIGDRPVRDVMVRLEHASPVTASAGLRTSLDGDTDQYQAAADFLT  118

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VAPEL RGQE GFTLSAPLR+LT+ SL V +PGIYPVLVNVNGTPDYGAPARLDNARFLL
Sbjct  119  VAPELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVNGTPDYGAPARLDNARFLL  178

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PVVGVPPD+A D GSAVAP+T+ PV ITMLWPLADRPRLAPG PGGT+PVRLVDDDLA S
Sbjct  179  PVVGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATS  238

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LA+GGRLDILL+AAE AT+ +VDPDGAVGRALCLA+DPDLL+TVNAMT GYVVSDSPDG 
Sbjct  239  LASGGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGP  298

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQLPGTPTHPGTGQA A+ WL+RLR L HRTCV PLP+AQADLDALQRVNDP LS  A  
Sbjct  299  AQLPGTPTHPGTGQATATEWLNRLRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALT  358

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            S   IVD+ILDV STRGAT++PDG LTGRA+ LL  +  TVAV AAD S  + QGSS+  
Sbjct  359  SVNSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVAVTAADLSAGDAQGSSETS  418

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
                  TAPRR+ P+VVAAPFDPAVGAALA AG NP VPTYLD SL VR+AH+S+TARRQ
Sbjct  419  V----DTAPRRVFPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQ  474

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DALG+M W +L  +  PRTQ+LVPPA+W+L +DDAQVILTAL T+IRSGLAVPRPLPAVI
Sbjct  475  DALGSMFWHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVI  534

Query  541  ADAAARTEPPEPPG----AYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGV  596
             +A    +   PP     A  +ARG+FNDD+T  I GQV RLW LTSAL  DDRTGLTGV
Sbjct  535  GEATQAAQTGAPPADQVSADGSARGQFNDDVTGAITGQVGRLWGLTSALMTDDRTGLTGV  594

Query  597  QYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEH  656
            QYTAPLREDMLRALSQS PPD+RNGLAQQRLAVVGKTI+DLF AVTIVNPGGSYTLATEH
Sbjct  595  QYTAPLREDMLRALSQSEPPDSRNGLAQQRLAVVGKTINDLFDAVTIVNPGGSYTLATEH  654

Query  657  SPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDV  716
            SPLPLALHNGLAVPIRVR+ VDAPPGM V DVG IELPPGYLPLR+PIEVNFTQRVAVDV
Sbjct  655  SPLPLALHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDV  714

Query  717  SLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLD  776
            +LRT DG+ LGEPVRLSVHSNAYGKVLFAITLSAAAVLV LAGRRLWHRFRGQPDRADLD
Sbjct  715  TLRTADGMRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLD  774

Query  777  RPDLPTGKHAPQRRAVASRDDEKHRV  802
            RPD P  +HA Q      R +++HRV
Sbjct  775  RPDPPDARHAAQPDLADPRVEQEHRV  800


>gi|118620064|ref|YP_908396.1| hypothetical protein MUL_5062 [Mycobacterium ulcerans Agy99]
 gi|118572174|gb|ABL06925.1| conserved hypothetical secreted protein [Mycobacterium ulcerans 
Agy99]
Length=783

 Score = 1154 bits (2984),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 623/792 (79%), Positives = 682/792 (87%), Gaps = 9/792 (1%)

Query  11   LARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTV  70
            + R+ + IG+VAG  + LT P AAP A AGEP  TPFVQVRIDQVTPD+VTT+S+P +TV
Sbjct  1    MWRLAAVIGIVAGFAVVLTAP-AAPRASAGEPGATPFVQVRIDQVTPDLVTTTSDPVITV  59

Query  71   SGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQE  130
            SG VTN GDRPVRDVMVRLEHAAAVTSS+ALRTSLDG TDQYQPAADFLTV+ EL RGQ+
Sbjct  60   SGMVTNIGDRPVRDVMVRLEHAAAVTSSSALRTSLDGSTDQYQPAADFLTVSSELRRGQQ  119

Query  131  AGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQA  190
             GFTLSAPLRSLT+PSL+++ PGI+PVLVNVNGTPDYGAPARLDNARFLLPVVGVPPD+ 
Sbjct  120  VGFTLSAPLRSLTKPSLSIDAPGIFPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDRD  179

Query  191  TDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDIL  250
             DF + V PET  PVWITMLWPLADRPRLAPG PGGT+PVRL+DDDLANSLA+GGRLD L
Sbjct  180  ADFDAPVTPETDKPVWITMLWPLADRPRLAPGVPGGTIPVRLIDDDLANSLASGGRLDTL  239

Query  251  LSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHP  310
            LSAAE AT+R+VDP+G V R++CLA+DPDLL+TVNAMT GYVVSDSPDG AQLPGTPTHP
Sbjct  240  LSAAELATSRDVDPEGTVTRSICLAVDPDLLVTVNAMTAGYVVSDSPDGPAQLPGTPTHP  299

Query  311  GTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRIL  370
            GTGQAAA+ WLDRLRTL  RTCV  L +AQADLDALQRVNDPRLS IA IS ADIVDRIL
Sbjct  300  GTGQAAANIWLDRLRTLARRTCVVTLAYAQADLDALQRVNDPRLSNIAVISAADIVDRIL  359

Query  371  DVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPR  430
            DV S RGA VLPDGPLT RA++LL+  G  V +AAADFS       +  G      TAPR
Sbjct  360  DVKSVRGAAVLPDGPLTSRAVDLLNADGGMVTIAAADFSAH----VAAEGGRATADTAPR  415

Query  431  RLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRS  490
            RLS  VVAAPFDPAVGAALAAAG+NPTVPTYLD SL V IAH+S TARRQDALGAMLWRS
Sbjct  416  RLSAEVVAAPFDPAVGAALAAAGSNPTVPTYLDSSLSVHIAHDSPTARRQDALGAMLWRS  475

Query  491  LEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPP  550
            L   AAPRTQILVPP +W L SDDAQ+ILTALAT I SGLAVPRPL A+I++AAA TEPP
Sbjct  476  LWGEAAPRTQILVPPTTWDLHSDDAQLILTALATTIHSGLAVPRPLLALISEAAAHTEPP  535

Query  551  EPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRAL  610
            EPPG Y +ARGRF+DD+T QI  Q  RLWKLTSA+T DDRTGLTG QYTAP REDMLRAL
Sbjct  536  EPPGPYPSARGRFDDDVTAQISDQSGRLWKLTSAMTTDDRTGLTGAQYTAPFREDMLRAL  595

Query  611  SQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVP  670
            SQS+PPDTRNGLAQQRLAVVG TI+D FGAVTIVNPGGSYTLATEHSPLPLALHNGLAVP
Sbjct  596  SQSVPPDTRNGLAQQRLAVVGNTINDFFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVP  655

Query  671  IRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPV  730
            IRVRLQVDAPPGMTV D+G+I LPPGYLP+RVPIEVNFTQRVA+DV+L+TPDG+ALGEPV
Sbjct  656  IRVRLQVDAPPGMTVTDLGEIALPPGYLPIRVPIEVNFTQRVAIDVTLKTPDGMALGEPV  715

Query  731  RLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRR  790
            RLSVHSNAYGK LFAITL+AAAVLV LAGRRLWHRFRGQPDRADLDRPD P  +HA    
Sbjct  716  RLSVHSNAYGKALFAITLTAAAVLVALAGRRLWHRFRGQPDRADLDRPDPPAARHA----  771

Query  791  AVASRDDEKHRV  802
            A   R DE+HRV
Sbjct  772  ASDHRVDEEHRV  783


>gi|342862337|ref|ZP_08718978.1| hypothetical protein MCOL_25723 [Mycobacterium colombiense CECT 
3035]
 gi|342130194|gb|EGT83522.1| hypothetical protein MCOL_25723 [Mycobacterium colombiense CECT 
3035]
Length=783

 Score = 1149 bits (2972),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/789 (77%), Positives = 672/789 (86%), Gaps = 11/789 (1%)

Query  18   IGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNT  77
            + +VAGL + LT P   P A AGEP  TPFV+VRIDQVTPDVVTT+S P VTVSG VTN 
Sbjct  2    LAIVAGLAV-LTGP-VLPRAAAGEPGVTPFVRVRIDQVTPDVVTTTSPPVVTVSGMVTNI  59

Query  78   GDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSA  137
            GDRPVRDVMVRLEHA AVT+S  LRT+LDG TD YQ AADFLTVAPEL RGQE GFTLSA
Sbjct  60   GDRPVRDVMVRLEHAGAVTASAGLRTTLDGDTDGYQAAADFLTVAPELQRGQEVGFTLSA  119

Query  138  PLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAV  197
            PLR+LT+PSL V +PGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPD+A D GSAV
Sbjct  120  PLRALTKPSLGVEKPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDRADDLGSAV  179

Query  198  APETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFA  257
            AP+T+ PV +TMLWPLADRPRLAPG PGGT+PVRLVDD+LA SLA+GGRLDILL++AE A
Sbjct  180  APDTSKPVLMTMLWPLADRPRLAPGVPGGTIPVRLVDDELATSLASGGRLDILLASAEVA  239

Query  258  TNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAA  317
            T+ +VDPDGAVGRALCLAIDPDLL+TVNAMT GYVVSDSPDG  QLPGTPTHPG GQA A
Sbjct  240  TSHDVDPDGAVGRALCLAIDPDLLVTVNAMTAGYVVSDSPDGPGQLPGTPTHPGAGQAPA  299

Query  318  SSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRG  377
            + WL+RLR L HRTCV PLP+AQADLDA+QRVNDP LSAIAT S   I+D+ILDVSS RG
Sbjct  300  TEWLNRLRALAHRTCVAPLPYAQADLDAVQRVNDPGLSAIATTSANGIIDKILDVSSIRG  359

Query  378  ATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVV  437
            AT++PDGPLT RA+ LLS + NTVA+AAAD    E QGSS+        TAPRRLSP+V+
Sbjct  360  ATLVPDGPLTSRAVKLLSANENTVAIAAADLPGAEAQGSSETAV----DTAPRRLSPQVL  415

Query  438  AAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAP  497
             APFDPAVGAALA AGT P  PTYLD SL VR+ H+S+TARRQDALG++ W +L  +  P
Sbjct  416  VAPFDPAVGAALAGAGTAPEAPTYLDSSLTVRLGHDSVTARRQDALGSIFWHALRRD-DP  474

Query  498  RTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAA----ARTEPPEPP  553
            RTQILVPP +W+L +DDAQVILTAL T IRSGLAVPRPLPAVIA+A     A  EPP+  
Sbjct  475  RTQILVPPTTWNLQADDAQVILTALTTTIRSGLAVPRPLPAVIAEATQAAQAHPEPPQEV  534

Query  554  GAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQS  613
            G+Y++ARG+F+DDIT  I GQV RLW LTS+L  DDRTGLTGVQYTAPLREDMLRALSQS
Sbjct  535  GSYTSARGQFSDDITAGIAGQVGRLWGLTSSLMTDDRTGLTGVQYTAPLREDMLRALSQS  594

Query  614  LPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRV  673
             PPDTR+GLAQQRLAVVGKT++DLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRV
Sbjct  595  EPPDTRSGLAQQRLAVVGKTVNDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRV  654

Query  674  RLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLS  733
            RL VDAPPGM V DVGQIELPPGYLPLR+PIEVNFTQRVAVDV+LRT DG+ LGEPVRLS
Sbjct  655  RLHVDAPPGMNVTDVGQIELPPGYLPLRIPIEVNFTQRVAVDVTLRTADGLRLGEPVRLS  714

Query  734  VHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVA  793
            VHSNAYGKVLFAITLSAAAVLV LAGRRLWHRFRGQPDRADLDRPD P  +HA +  A  
Sbjct  715  VHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLDRPDPPDARHATEAGAAD  774

Query  794  SRDDEKHRV  802
               +++HRV
Sbjct  775  QPVEQEHRV  783


>gi|254823063|ref|ZP_05228064.1| hypothetical protein MintA_24255 [Mycobacterium intracellulare 
ATCC 13950]
Length=790

 Score = 1147 bits (2967),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 601/796 (76%), Positives = 677/796 (86%), Gaps = 10/796 (1%)

Query  11   LARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTV  70
            + R+ + +G+VAGL  A+      P A AGEP  TPFV+VRIDQVTPDVVTT+S P VTV
Sbjct  1    MLRIAAVLGIVAGL--AVLAGPVVPPAAAGEPGVTPFVRVRIDQVTPDVVTTTSPPVVTV  58

Query  71   SGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQE  130
            SG V N GDRPVRDVMVRLEH+ AVT+S  LRT+LDG TD+Y+ AADFLTVAPEL RGQ+
Sbjct  59   SGMVINIGDRPVRDVMVRLEHSGAVTTSAGLRTTLDGDTDRYEAAADFLTVAPELQRGQK  118

Query  131  AGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQA  190
             GFTLSAPLR+LT+PSL   +PGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPD+A
Sbjct  119  VGFTLSAPLRALTKPSLGAEKPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDRA  178

Query  191  TDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDIL  250
             D GSAVAP+T+ PV ITMLWPLADRPRLAPG PGGT+PVRLVDDDLA SLA+GGRLDIL
Sbjct  179  DDVGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATSLASGGRLDIL  238

Query  251  LSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHP  310
            LSAAE AT+ +VDPDGAVGRALCLAIDPDLL+TVNAMT GY+VS+SPDG  Q+PGTPTH 
Sbjct  239  LSAAEVATSHDVDPDGAVGRALCLAIDPDLLVTVNAMTAGYIVSNSPDGPGQIPGTPTHA  298

Query  311  GTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRIL  370
            GTGQA A+ WL+RLR L HRTCV PLP+AQ DLDALQRVNDP L+A AT +   IVD+IL
Sbjct  299  GTGQATATEWLNRLRALAHRTCVAPLPYAQTDLDALQRVNDPGLTATATTTGNSIVDKIL  358

Query  371  DVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPR  430
            DVSSTRGAT++PD PLT RA+ LL  + +TVA+ AAD S  E QGSS+        TAPR
Sbjct  359  DVSSTRGATLVPDAPLTNRAVKLLGANESTVAITAADLSAAEAQGSSETAV----DTAPR  414

Query  431  RLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRS  490
            RLSP+V  APFDPAVGAALA AG++P VPTYLDPSL VR+AH+S+TARRQDALG++ W +
Sbjct  415  RLSPQVAVAPFDPAVGAALAGAGSSPEVPTYLDPSLTVRLAHDSVTARRQDALGSIFWHA  474

Query  491  LEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPP  550
            L P+ APRTQILVPPA+W+L +DDAQV+LTAL+T+IRSGLAVPRPLPAVIADA++ TE  
Sbjct  475  LRPDDAPRTQILVPPATWNLQADDAQVMLTALSTSIRSGLAVPRPLPAVIADASSHTEAT  534

Query  551  EPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRAL  610
            E  GAY++ARG+FNDD+T  I GQV RL  LTSAL  DDRTGLTGVQYTAPLREDMLRAL
Sbjct  535  EEAGAYASARGQFNDDVTAAIAGQVGRLSGLTSALMTDDRTGLTGVQYTAPLREDMLRAL  594

Query  611  SQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVP  670
            SQS PPD+RNGLAQ+RLAVVGKTI+DLFGAVTIVNPGGSYTLATEHSPLPLALHNGL+VP
Sbjct  595  SQSEPPDSRNGLAQERLAVVGKTINDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLSVP  654

Query  671  IRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPV  730
            IRVR+ VDAPPGM V DVGQIELPPGYLPLR+PIEVNFTQRVAVDV+LRT DG+ LGEPV
Sbjct  655  IRVRVHVDAPPGMNVTDVGQIELPPGYLPLRIPIEVNFTQRVAVDVTLRTSDGLRLGEPV  714

Query  731  RLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRR  790
            RLSVHSNAYGKVLFAITLSAAAVLV LAGRRLWHRFRGQPD ADLDRPD P  + A +  
Sbjct  715  RLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDPADLDRPDPPHARRAAESG  774

Query  791  AVA----SRDDEKHRV  802
            A       R +++HRV
Sbjct  775  ATHDNADQRVEQEHRV  790


>gi|15828459|ref|NP_302722.1| hypothetical protein [Mycobacterium leprae TN]
 gi|221230936|ref|YP_002504352.1| putative secreted protein [Mycobacterium leprae Br4923]
 gi|13093889|emb|CAC32231.1| putative secreted protein [Mycobacterium leprae]
 gi|219934043|emb|CAR72799.1| putative secreted protein [Mycobacterium leprae Br4923]
Length=797

 Score = 1073 bits (2775),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 578/800 (73%), Positives = 650/800 (82%), Gaps = 4/800 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TA +L  A    +   + +VA   + L  P+A PHA A EP  T FV+VRID+VTPDVV
Sbjct  1    MTASRLRLAGSLSIALVVDIVASFAVLLVAPTATPHAAADEPRATSFVRVRIDKVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEP VTVSG VTN GDRPVRD+MVRLEH +AV SS  LRT LD G DQ+Q AADF+T
Sbjct  61   TTSSEPVVTVSGVVTNIGDRPVRDLMVRLEHESAVISSAVLRTYLDDGADQFQTAADFVT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VA EL RGQEAGFTL AP+RS T+PS+A++QPGIYPVLVNVNGTPDYG PARLDNARFLL
Sbjct  121  VAEELQRGQEAGFTLVAPIRSTTKPSMAIDQPGIYPVLVNVNGTPDYGTPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PV GVPP ++    SAVAP+ T PVWITMLWPLADRPRL+PGAPGGT+PVRLVDDDLA+S
Sbjct  181  PVAGVPPAKSDAMDSAVAPDITKPVWITMLWPLADRPRLSPGAPGGTIPVRLVDDDLASS  240

Query  241  LANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGA  300
            LA GGRLDILL+AAE AT R+VDPDGAV RALCLA+DPDLL+TVNAMTGGY+VS+SPDG 
Sbjct  241  LAPGGRLDILLTAAETATGRDVDPDGAVSRALCLAVDPDLLVTVNAMTGGYIVSNSPDGP  300

Query  301  AQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATI  360
            AQ PGTPTHPGTGQ AA  WL+RLR L HR CV  LP+AQADLDALQR+ND  LS  AT 
Sbjct  301  AQQPGTPTHPGTGQDAAVIWLNRLRALAHRMCVASLPYAQADLDALQRINDTELSTTATT  360

Query  361  SPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIG  420
            S  DIVD ILDV+S RG T+LPD PLT R ++LL+ + +TVA+AAA FS ++    S  G
Sbjct  361  SVGDIVDHILDVTSIRGVTMLPDSPLTNRVVDLLNDNNSTVAIAAAAFSAQD----STSG  416

Query  421  SALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQ  480
            S +   T PRRLSPRVV APFDPAVGAALAAAGT+P VPTYLD SL +RI H+S TARRQ
Sbjct  417  SLVDIDTEPRRLSPRVVVAPFDPAVGAALAAAGTDPIVPTYLDSSLNIRIVHDSDTARRQ  476

Query  481  DALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVI  540
            DAL ++LWR+LE +AAPR+QILVPP SW L +DDA+V+LT L+T IRSGLAV RPLP VI
Sbjct  477  DALSSILWRALERDAAPRSQILVPPTSWHLQADDARVMLTTLSTVIRSGLAVARPLPTVI  536

Query  541  ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTA  600
            ADA ART+  +  G+Y++ARGRFNDDI   I  QV RLW LTSALT D RTGLTGVQYTA
Sbjct  537  ADALARTKLSDTVGSYTSARGRFNDDIIADIASQVGRLWGLTSALTADGRTGLTGVQYTA  596

Query  601  PLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLP  660
            PLREDMLRALSQ  PP TRNGLAQQRLAVV KTI DL GAVTIVNPGGSYTLATEHSPLP
Sbjct  597  PLREDMLRALSQLEPPATRNGLAQQRLAVVSKTIKDLIGAVTIVNPGGSYTLATEHSPLP  656

Query  661  LALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRT  720
            LALHNGLAVPIRVRLQVDAPPGMTV DV QIELPPGYLPLRVPIEVNFTQRVAVDV+L+T
Sbjct  657  LALHNGLAVPIRVRLQVDAPPGMTVTDVSQIELPPGYLPLRVPIEVNFTQRVAVDVALQT  716

Query  721  PDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDL  780
            P+G+ LGEPVRL VHSNAYGKVLF ITL+AA +L+ LAGRRLWHRFR Q + AD +RPD 
Sbjct  717  PEGIQLGEPVRLLVHSNAYGKVLFEITLTAATILIVLAGRRLWHRFRIQTEGADSNRPDP  776

Query  781  PTGKHAPQRRAVASRDDEKH  800
                  PQ +     D+E  
Sbjct  777  LIVDAHPQHQYDDWVDEENR  796


>gi|333992973|ref|YP_004525587.1| hypothetical protein JDM601_4333 [Mycobacterium sp. JDM601]
 gi|333488941|gb|AEF38333.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=783

 Score =  941 bits (2433),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 508/763 (67%), Positives = 583/763 (77%), Gaps = 19/763 (2%)

Query  24   LGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVR  83
            LGMAL   +AAPHA+AGEP    FVQ+R+DQVTP+++TTSS P VTVSGTV+N GDRPVR
Sbjct  8    LGMALG-SAAAPHAIAGEPGGMSFVQIRVDQVTPELITTSSVPVVTVSGTVSNVGDRPVR  66

Query  84   DVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLT  143
            DVMVRLE A AV SS  LRT+L G  DQY+P   F TVA EL RGQEA FTLSAPL S +
Sbjct  67   DVMVRLEQAGAVASSAGLRTNLSGSNDQYRPVGPFSTVAAELQRGQEARFTLSAPLHSAS  126

Query  144  RPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATD--FGSAVAPET  201
            +P+L++++PGIYP+LVNVNGTPDYG PARLD+ARFLLPV G+P  +A       AVAP+T
Sbjct  127  QPALSIDRPGIYPLLVNVNGTPDYGEPARLDDARFLLPVTGLPKTEADGDPLAGAVAPDT  186

Query  202  TAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNRE  261
            + PV +TMLWPLADRPRL PGAPGGT+PVRL DD+LA SLA GGRLD LLSAAEFAT+  
Sbjct  187  SRPVRLTMLWPLADRPRLTPGAPGGTLPVRLTDDELAKSLAPGGRLDALLSAAEFATSPT  246

Query  262  VDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWL  321
            VD  G V +ALCLAIDPDLL+TVNAMT GY+V+DSPDGAA      +HPGTGQAAA++WL
Sbjct  247  VDGGGVVNQALCLAIDPDLLVTVNAMTRGYLVADSPDGAA------SHPGTGQAAATTWL  300

Query  322  DRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVL  381
            +RLR L HR+CVT  P+AQADLDAL RV DP L AIA   PADI+DRIL V+STRGA VL
Sbjct  301  ERLRRLAHRSCVTATPYAQADLDALARVGDPGLDAIAVSRPADIIDRILQVTSTRGAVVL  360

Query  382  PDGPLTGRAINLLSTHGNT---VAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVA  438
             DG LT  A +L+S   +T   V + A+D S ++    S  G++      PRRLSP++V 
Sbjct  361  GDGKLTTGAADLISAESSTGAAVVITASDCSAQD----STTGASATADVTPRRLSPQLVV  416

Query  439  APFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLE-PNA--  495
            AP+DPAVGAALA  GT+P  PTYLD SL VR+ H+S  ARRQDALGAMLWR LE P+   
Sbjct  417  APYDPAVGAALAGMGTDPVAPTYLDGSLTVRLHHDSALARRQDALGAMLWRGLEAPDGPD  476

Query  496  APRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGA  555
             PR QIL+PPA W    DDAQ +LT + TA+RSGLAVPRPL AVIA++   T  P  P  
Sbjct  477  EPRDQILMPPAYWKPRVDDAQAVLTTVGTALRSGLAVPRPLTAVIAESQGVTAAPAHPLP  536

Query  556  YSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLP  615
               A G F  D+   +   + RLW LTSALT D RTGLTG QYTAPL EDMLRALSQS P
Sbjct  537  AEQAVGGFGPDVIGAVTDDIGRLWALTSALTTDVRTGLTGDQYTAPLAEDMLRALSQSEP  596

Query  616  PDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRL  675
             D R+GLA QRL+VVG T+ DL GAVTIVNP GSYTLATEHSPLPLAL N LAVPIRVRL
Sbjct  597  LDVRSGLAAQRLSVVGDTVADLIGAVTIVNPAGSYTLATEHSPLPLALRNDLAVPIRVRL  656

Query  676  QVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVH  735
             VDAPPGMTVAD+G +ELPPGYLPLRVP+EV   Q   VDV+L+TP G+ LGE  RLSVH
Sbjct  657  HVDAPPGMTVADMGDLELPPGYLPLRVPVEVRVNQHFVVDVALQTPAGLPLGESARLSVH  716

Query  736  SNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRP  778
            SNAYG VLF IT++AAA L  L GRRLWHRFRGQPDRADLDRP
Sbjct  717  SNAYGMVLFLITMTAAAALTMLTGRRLWHRFRGQPDRADLDRP  759


>gi|120406992|ref|YP_956821.1| hypothetical protein Mvan_6063 [Mycobacterium vanbaalenii PYR-1]
 gi|119959810|gb|ABM16815.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=811

 Score =  921 bits (2380),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/744 (66%), Positives = 576/744 (78%), Gaps = 16/744 (2%)

Query  46   PFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSL  105
            PF++V+ID +TPDVVTT+S P VTV+GT++N GDRPVRDV+VRLE A AV SSTALRT L
Sbjct  35   PFLRVQIDNITPDVVTTTSNPLVTVTGTISNIGDRPVRDVVVRLERAKAVASSTALRTDL  94

Query  106  DGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTP  165
             G  DQYQP ADF+T APEL RGQ   F L+ PLRS    S+ ++ PG+YPV+VNVNGTP
Sbjct  95   AGNVDQYQPVADFVTAAPELARGQRVPFRLAYPLRSGVPSSMRIDNPGVYPVMVNVNGTP  154

Query  166  DYGAPARLDNARFLLPVVGVPPDQATD-----FGSAVAPETTAPVWITMLWPLADRPRLA  220
            DYGAPARLD++RFLLPV+GVPP+  +D       SAV P+TT PV +T+ WPLADRPRLA
Sbjct  155  DYGAPARLDDSRFLLPVLGVPPEGDSDSASEALDSAVPPDTTRPVGLTVFWPLADRPRLA  214

Query  221  PGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDL  280
             GAPGGT PVRL+DD+LA SLA GGRLD LL+A +FAT  EVDP G V R +CLAIDPDL
Sbjct  215  AGAPGGTTPVRLIDDELAGSLAPGGRLDTLLTAVDFATGPEVDPGGNVTRTVCLAIDPDL  274

Query  281  LITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQ  340
            LITVNAMT GYVV+D+ D     P TPTHPGTGQ AA  WL+RL+ L  R CV P  +AQ
Sbjct  275  LITVNAMTAGYVVNDAADAG---PRTPTHPGTGQQAAVDWLNRLKALARRMCVAPTTYAQ  331

Query  341  ADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNT  400
            ADLDAL RV DP LSAIAT   A I+D++L V+STRGA+++ DGPLT  A+ LLS HG T
Sbjct  332  ADLDALHRVADPGLSAIATTGAAGILDQLLGVTSTRGASLVGDGPLTAPAVQLLSGHGPT  391

Query  401  VAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPT  460
            VA+ AA+     + G +  G+A    T P R +P VVAAPFDPAVGAALA  G  P  P+
Sbjct  392  VAIGAANLG---EPGETADGTAETADTVPMRYTPTVVAAPFDPAVGAALAGMGPTPESPS  448

Query  461  YLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILT  520
            YL+P+L V +  +S  ARRQDA+GA+LWRSL P+  PRTQI++PP  W+LA  DAQ +LT
Sbjct  449  YLNPALDVAVKQDSDVARRQDAIGALLWRSLNPDIGPRTQIVMPPLMWNLAPADAQAVLT  508

Query  521  ALATAIRSGLAVPRPLPAVIADA-AARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLW  579
            A+A++IR+GLAVPRPL A+I +A +A  + P P G+    RGRF++ + + I     RLW
Sbjct  509  AVASSIRAGLAVPRPLTALIDEATSAARDAPLPSGSLGNPRGRFDNGVVSGISAATGRLW  568

Query  580  KLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFG  639
              T+ALT D+RTGLTG QYTAPLRED+LRALS S+PPD RNGLAQQRL  VG+T++DLF 
Sbjct  569  GFTAALTTDERTGLTGNQYTAPLREDLLRALSLSVPPDARNGLAQQRLTTVGRTVEDLFN  628

Query  640  AVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLP  699
            AVTIVNPGGSYTLATE SPLPLAL N L VPIRVRL +DAPPGM+V D+G+I LPPG+LP
Sbjct  629  AVTIVNPGGSYTLATERSPLPLALRNDLPVPIRVRLDIDAPPGMSVTDMGEIVLPPGFLP  688

Query  700  LRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAG  759
            L+VPIEV+FTQRVAVDV+LRT DG+ LGEPVRLSVHSNAYGKVLF ITL+  AVLV L G
Sbjct  689  LKVPIEVHFTQRVAVDVALRTADGLPLGEPVRLSVHSNAYGKVLFFITLTGGAVLVLLVG  748

Query  760  RRLWHRFRGQPDRADLD----RPD  779
            RRLWHRFRGQPD ADL+    RPD
Sbjct  749  RRLWHRFRGQPDPADLEADPTRPD  772


>gi|145221437|ref|YP_001132115.1| hypothetical protein Mflv_0843 [Mycobacterium gilvum PYR-GCK]
 gi|145213923|gb|ABP43327.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=804

 Score =  902 bits (2331),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/749 (65%), Positives = 572/749 (77%), Gaps = 16/749 (2%)

Query  41   EPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTA  100
            +P   PF++++ID VTPD+VTT+S+  VTV+GTV+N GDR VRDV++RLE A AVT+ST 
Sbjct  31   QPGAMPFLRIQIDTVTPDIVTTTSDQTVTVTGTVSNIGDRDVRDVVIRLERAEAVTASTE  90

Query  101  LRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVN  160
            LRT L G  DQY P ADF+T APEL RGQE  F L+ PLRS   PS+ ++ PG+YP++VN
Sbjct  91   LRTELTGNVDQYLPVADFITAAPELARGQEVPFRLAYPLRSDNGPSMRIDAPGVYPLMVN  150

Query  161  VNGTPDYGAPARLDNARFLLPVVGVPPDQATD-----FGSAVAPETTAPVWITMLWPLAD  215
            VNGTPDYG+PARLD++RFLLPV+GVPP + +D     F SAV P+TT PV +TM WPLAD
Sbjct  151  VNGTPDYGSPARLDDSRFLLPVLGVPPAEGSDGAGEAFKSAVPPDTTRPVGLTMFWPLAD  210

Query  216  RPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLA  275
            RPRLA GAPGGT PVRL+DD+LA SLA GGRLD +L+A +FAT  EVDPDG++ RALC+A
Sbjct  211  RPRLAAGAPGGTTPVRLIDDELATSLAPGGRLDTMLAAVDFATGPEVDPDGSLARALCIA  270

Query  276  IDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTP  335
            +DPDLL+TVNAMT GYVV+D+ D     P TPTHPG GQ AA +WL+RL+TL  R CV P
Sbjct  271  VDPDLLVTVNAMTNGYVVNDAADAG---PTTPTHPGAGQQAAVTWLNRLKTLARRLCVAP  327

Query  336  LPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLS  395
              +AQADLDAL RV DP LSAIAT     IVD+IL V S RG T++ DGPLT   + LL+
Sbjct  328  TTYAQADLDALNRVADPGLSAIATTGAGPIVDQILGVPSFRGVTLVGDGPLTEPVVQLLA  387

Query  396  THGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTN  455
              G TVA+AAA+    +  G +  G+     TAP R +P VVAAPFDPAVGAALA AG  
Sbjct  388  GQGPTVAIAAAEL---QGPGETGDGTPATADTAPVRYAPSVVAAPFDPAVGAALAGAGPT  444

Query  456  PTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDA  515
            P  P+Y+DPSL + +  +S TARRQ ALGA+LWRSL P+  PRTQILVPP  W+L + DA
Sbjct  445  PESPSYVDPSLDIAVKQDSDTARRQVALGALLWRSLNPDTTPRTQILVPPLMWNLTAPDA  504

Query  516  QVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPP-GAYSAARGRFNDDITTQIGGQ  574
            Q +LTA+ T+IR+GLA+PRPLP +IA+A        PP GA    RGRF+  + T I   
Sbjct  505  QAVLTAVGTSIRAGLAIPRPLPVLIAEAGTTARESGPPAGALGNPRGRFDSGVVTGISAA  564

Query  575  VARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTI  634
              RLW LT+AL  D+RTGLTG  YTAPLRED+LRALS S+PPD RNGLAQQRL  VG+T+
Sbjct  565  TGRLWGLTAALATDERTGLTGNGYTAPLREDLLRALSLSVPPDARNGLAQQRLTTVGRTV  624

Query  635  DDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELP  694
            +DLF AVTIVNPGGSYTLATE SPLPLAL N L VPIRVRL +DAPPGM V D+G+I LP
Sbjct  625  EDLFNAVTIVNPGGSYTLATERSPLPLALRNDLPVPIRVRLDIDAPPGMEVTDMGEIVLP  684

Query  695  PGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVL  754
            PG+LPL+VPIEV+FTQRVAVDV+LRT DG+ LGEPVRLSVHSNAYGKVLF ITL+   VL
Sbjct  685  PGFLPLKVPIEVHFTQRVAVDVALRTADGLPLGEPVRLSVHSNAYGKVLFVITLTGGVVL  744

Query  755  VTLAGRRLWHRFRGQPDRADLD----RPD  779
              L GRRLWHRFRGQPDRADL+    RPD
Sbjct  745  ALLVGRRLWHRFRGQPDRADLEADPTRPD  773


>gi|315446811|ref|YP_004079690.1| hypothetical protein Mspyr1_53310 [Mycobacterium sp. Spyr1]
 gi|315265114|gb|ADU01856.1| hypothetical protein Mspyr1_53310 [Mycobacterium sp. Spyr1]
Length=804

 Score =  902 bits (2330),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/749 (65%), Positives = 572/749 (77%), Gaps = 16/749 (2%)

Query  41   EPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTA  100
            +P   PF++++ID VTPD+VTT+S+  VTV+GTV+N GDR VRDV++RLE A AVT+ST 
Sbjct  31   QPGAMPFLRIQIDTVTPDIVTTTSDQTVTVTGTVSNIGDRDVRDVVIRLERAEAVTASTE  90

Query  101  LRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVN  160
            LRT L G  DQY P ADF+T APEL RGQE  F L+ PLRS   PS+ ++ PG+YP++VN
Sbjct  91   LRTELTGNVDQYLPVADFITAAPELARGQEVPFRLAYPLRSDNGPSMRIDAPGVYPLMVN  150

Query  161  VNGTPDYGAPARLDNARFLLPVVGVPPDQATD-----FGSAVAPETTAPVWITMLWPLAD  215
            VNGTPDYG+PARLD++RFLLPV+GVPP + +D     F SAV P+TT PV +TM WPLAD
Sbjct  151  VNGTPDYGSPARLDDSRFLLPVLGVPPAEGSDGAGEAFESAVPPDTTRPVGLTMFWPLAD  210

Query  216  RPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLA  275
            RPRLA GAPGGT PVRL+DD+LA SLA GGRLD +L+A +FAT  EVDPDG++ RALC+A
Sbjct  211  RPRLAAGAPGGTTPVRLIDDELATSLAPGGRLDTMLAAVDFATGPEVDPDGSLARALCIA  270

Query  276  IDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTP  335
            +DPDLL+TVNAMT GYVV+D+ D     P TPTHPG GQ AA +WL+RL+TL  R CV P
Sbjct  271  VDPDLLVTVNAMTNGYVVNDAADAG---PTTPTHPGAGQQAAVTWLNRLKTLARRLCVAP  327

Query  336  LPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLS  395
              +AQADLDAL RV DP LSAIAT     IVD+IL V S RG T++ DGPLT   + LL+
Sbjct  328  TTYAQADLDALNRVADPGLSAIATTGAGPIVDQILGVPSFRGVTLVGDGPLTEPVVQLLA  387

Query  396  THGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTN  455
              G TVA+AAA+    +  G +  G+     TAP R +P VVAAPFDPAVGAALA AG  
Sbjct  388  GQGPTVAIAAAEL---QGPGETGDGTPATADTAPVRYAPSVVAAPFDPAVGAALAGAGPT  444

Query  456  PTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDA  515
            P  P+Y+DPSL + +  +S TARRQ ALGA+LWRSL P+  PRTQILVPP  W+L + DA
Sbjct  445  PESPSYVDPSLDIAVKQDSDTARRQVALGALLWRSLNPDTTPRTQILVPPLMWNLTAPDA  504

Query  516  QVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPP-GAYSAARGRFNDDITTQIGGQ  574
            Q +LTA+ T+IR+GLA+PRPLP +IA+A        PP GA    RGRF+  + T I   
Sbjct  505  QAVLTAVGTSIRAGLAIPRPLPVLIAEAGTTARESGPPAGALGNPRGRFDSGVVTGISAA  564

Query  575  VARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTI  634
              RLW LT+AL  D+RTGLTG  YTAPLRED+LRALS S+PPD RNGLAQQRL  VG+T+
Sbjct  565  TGRLWGLTAALATDERTGLTGNGYTAPLREDLLRALSLSVPPDARNGLAQQRLTTVGRTV  624

Query  635  DDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELP  694
            +DLF AVTIVNPGGSYTLATE SPLPLAL N L VPIRVRL +DAPPGM V D+G+I LP
Sbjct  625  EDLFNAVTIVNPGGSYTLATERSPLPLALRNDLPVPIRVRLDIDAPPGMEVTDMGEIVLP  684

Query  695  PGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVL  754
            PG+LPL+VPIEV+FTQRVAVDV+LRT DG+ LGEPVRLSVHSNAYGKVLF ITL+   VL
Sbjct  685  PGFLPLKVPIEVHFTQRVAVDVALRTADGLPLGEPVRLSVHSNAYGKVLFVITLTGGVVL  744

Query  755  VTLAGRRLWHRFRGQPDRADLD----RPD  779
              L GRRLWHRFRGQPDRADL+    RPD
Sbjct  745  ALLVGRRLWHRFRGQPDRADLEADPTRPD  773


>gi|108802358|ref|YP_642555.1| hypothetical protein Mmcs_5399 [Mycobacterium sp. MCS]
 gi|119871511|ref|YP_941463.1| hypothetical protein Mkms_5488 [Mycobacterium sp. KMS]
 gi|108772777|gb|ABG11499.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119697600|gb|ABL94673.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=809

 Score =  898 bits (2320),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 498/776 (65%), Positives = 585/776 (76%), Gaps = 29/776 (3%)

Query  35   PHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAA  94
            PHA AGEP    F+Q+RID+VTPDVVTT+S+P VTVSG V N GDR VRDV++RLEHA A
Sbjct  30   PHAAAGEPGAAAFLQLRIDRVTPDVVTTASDPVVTVSGVVRNVGDRTVRDVVLRLEHAPA  89

Query  95   VTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGI  154
            V SS+ LRT+L G  DQ++P ADF+TVAPELDRG+E  FT + P+R+   PSL +  PG+
Sbjct  90   VDSSSGLRTNLTGNLDQFEPVADFVTVAPELDRGKEVPFTFAYPIRAADGPSLRIESPGV  149

Query  155  YPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPD-----QATDFGSAVAPETTAPVWITM  209
            YP++VNVNGTPDYGAPARLD+ARFLLPV+GVP +      A    S V P+T+ PV +TM
Sbjct  150  YPLMVNVNGTPDYGAPARLDDARFLLPVLGVPSEPGAESAAETLTSVVPPDTSKPVRLTM  209

Query  210  LWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVG  269
             WPLAD+PRLA G PGGT PVRL+DDDLA SLA GGRL+ LL+A +FAT   VD  G +G
Sbjct  210  FWPLADKPRLAAGIPGGTTPVRLIDDDLAASLAPGGRLETLLAAVDFATGPTVDQGGELG  269

Query  270  RALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVH  329
            RALCLA+DPDLL+TVNAMT GY V+D PD     P TPT PGTGQ AA  WL+RL+ L  
Sbjct  270  RALCLAVDPDLLVTVNAMTAGYAVNDGPDAG---PTTPTRPGTGQEAAVGWLNRLKVLAR  326

Query  330  RTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGR  389
            R CVT  P+AQADLDALQRV DPRL AIAT   ADIVD+IL V STRG T++ DGPLTG 
Sbjct  327  RMCVTATPYAQADLDALQRVGDPRLGAIATTGAADIVDQILGVPSTRGVTLVGDGPLTGA  386

Query  390  AINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAAL  449
            A  LLST G TVAV AA  +  +   ++ +GS      AP R SP +VA PFDP +GAAL
Sbjct  387  AAQLLSTQGRTVAVTAATLTARDD--ATGLGSTA--DLAPVRYSPNLVAMPFDPTIGAAL  442

Query  450  AAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWS  509
            A AG  P  PTYLDPSL V + H+S  ARRQ+A+G++LWR L+P+  PRTQI+VPP  WS
Sbjct  443  AGAGAEPAAPTYLDPSLDVPLRHDSAVARRQNAIGSLLWRGLQPDTGPRTQIVVPPLVWS  502

Query  510  LASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSA-----ARGRFN  564
               DDAQ +LT++ TAIR+GLA+PRPL  VIA+  A   PP+P   + A      RGR +
Sbjct  503  PRPDDAQAVLTSMGTAIRAGLALPRPLREVIAEGDA--VPPQPDAGWPADDIGNPRGRID  560

Query  565  DDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQ  624
            D +T+ I     RL  LT+AL +D+RTGLTG+ YTAPLREDMLRALSQS+PP  R+GLA+
Sbjct  561  DAVTSGIAATNGRLSGLTAALGVDERTGLTGIGYTAPLREDMLRALSQSVPPPARDGLAR  620

Query  625  QRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMT  684
            QRLAVV  T+ D+FGAV I+NPGG+YTLATE SPLPLAL N L VPIRVRL VDAPPGMT
Sbjct  621  QRLAVVTDTVGDMFGAVRIMNPGGAYTLATERSPLPLALRNDLPVPIRVRLAVDAPPGMT  680

Query  685  VADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLF  744
            V D+G+I LPPGYLPLRVPIEV+FTQRVAVDV+LRT +G+ LGEPVRLSVHSNAYGKVLF
Sbjct  681  VDDLGEISLPPGYLPLRVPIEVHFTQRVAVDVALRTAEGLPLGEPVRLSVHSNAYGKVLF  740

Query  745  AITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKH  800
             IT+SA AVLV LAGRRLWHRFRGQPD ADLDRP          +RAVA R  E H
Sbjct  741  IITMSAGAVLVLLAGRRLWHRFRGQPDPADLDRP----------KRAVADRTHEAH  786


>gi|126438338|ref|YP_001074029.1| hypothetical protein Mjls_5775 [Mycobacterium sp. JLS]
 gi|126238138|gb|ABO01539.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=809

 Score =  897 bits (2317),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/776 (65%), Positives = 585/776 (76%), Gaps = 29/776 (3%)

Query  35   PHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAA  94
            PHA AGEP    F+Q+RID+VTPDVVTT+S+P VTVSG V N GDR VRDV++RLEHA A
Sbjct  30   PHAAAGEPGAAAFLQLRIDRVTPDVVTTASDPVVTVSGVVRNVGDRTVRDVVLRLEHAPA  89

Query  95   VTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGI  154
            V SS+ LRT+L G  DQ++P ADF+TVAPELDRG+E  FT + P+R+   PSL +  PG+
Sbjct  90   VDSSSGLRTNLTGNLDQFEPVADFVTVAPELDRGKEVPFTFAYPIRAADGPSLRIESPGV  149

Query  155  YPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPD-----QATDFGSAVAPETTAPVWITM  209
            YP++VNVNGTPDYGAPARLD+ARFLLPV+GVP +      A    S V P+T+ PV +TM
Sbjct  150  YPLMVNVNGTPDYGAPARLDDARFLLPVLGVPSEPGAESAAETLTSVVPPDTSKPVRLTM  209

Query  210  LWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVG  269
             WPLAD+PRLA G PGGT PVRL+DDDLA SLA GGRL+ LL+A +FAT   VD  G +G
Sbjct  210  FWPLADKPRLAAGIPGGTTPVRLIDDDLAASLAPGGRLETLLAAVDFATGPTVDQGGELG  269

Query  270  RALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVH  329
            RALCLA+DPDLL+TVNAMT GY V+D PD     P TPT PGTGQ AA  WL+RL+ L  
Sbjct  270  RALCLAVDPDLLVTVNAMTAGYAVNDGPDAG---PTTPTRPGTGQEAAVGWLNRLKVLAR  326

Query  330  RTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGR  389
            R CVT  P+AQADLDALQRV DPRL AIAT   ADIVD+IL V STRG T++ DGPLTG 
Sbjct  327  RMCVTATPYAQADLDALQRVGDPRLGAIATTGAADIVDQILGVPSTRGVTLVGDGPLTGA  386

Query  390  AINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAAL  449
            A  LLST G TVAV AA  +  +   ++ +GS      AP R SP +VA PFDP +GAAL
Sbjct  387  AAQLLSTQGRTVAVTAATLTARDD--ATGLGSTA--DLAPVRYSPNLVAMPFDPTIGAAL  442

Query  450  AAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWS  509
            A AG  P  PTYLDPSL V + H+S  ARRQ+A+G++LWR L+P+  PRTQI+VPP  WS
Sbjct  443  AGAGAEPAAPTYLDPSLDVPLRHDSAVARRQNAIGSLLWRGLQPDTGPRTQIVVPPLVWS  502

Query  510  LASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSA-----ARGRFN  564
               DDAQ +LT++ TAIR+GLA+PRPL  VIA+  A   PP+P   + A      RGR +
Sbjct  503  PRPDDAQAVLTSMGTAIRAGLALPRPLREVIAEGDA--VPPQPDAGWPADDIGNPRGRID  560

Query  565  DDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQ  624
            D +T+ I     RL  LT+AL +D+RTGLTG+ YTAPLREDMLRALSQS+PP  R+GLA+
Sbjct  561  DAVTSGIAATNGRLSGLTAALGVDERTGLTGIGYTAPLREDMLRALSQSVPPPARDGLAR  620

Query  625  QRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMT  684
            QRLAVV  T+ D+FGAV I+NPGG+YTLATE SPLPLAL N L VPIRVRL V+APPGMT
Sbjct  621  QRLAVVTDTVGDMFGAVRIMNPGGAYTLATERSPLPLALRNDLPVPIRVRLAVNAPPGMT  680

Query  685  VADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLF  744
            V D+G+I LPPGYLPLRVPIEV+FTQRVAVDV+LRT +G+ LGEPVRLSVHSNAYGKVLF
Sbjct  681  VDDLGEISLPPGYLPLRVPIEVHFTQRVAVDVALRTAEGLPLGEPVRLSVHSNAYGKVLF  740

Query  745  AITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHAPQRRAVASRDDEKH  800
             IT+SA AVLV LAGRRLWHRFRGQPD ADLDRP          +RAVA R  E H
Sbjct  741  IITMSAGAVLVLLAGRRLWHRFRGQPDPADLDRP----------KRAVADRTHEAH  786


>gi|118472256|ref|YP_891122.1| hypothetical protein MSMEG_6928 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118173543|gb|ABK74439.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=800

 Score =  884 bits (2285),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 506/783 (65%), Positives = 584/783 (75%), Gaps = 24/783 (3%)

Query  13   RVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSG  72
            RV     +VA L M +  P   P A A       F+Q+ ID+++PD+VTT+S+  VTVSG
Sbjct  2    RVLLVTAIVALLTMIVGPPDLLPRA-AAHTDEARFLQIHIDRISPDLVTTTSDSTVTVSG  60

Query  73   TVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAG  132
             V N GDRPVRDV++R+EHA AVTSST LRT L G  DQ++P A+F+TVA E+ RGQ   
Sbjct  61   VVQNVGDRPVRDVVIRMEHARAVTSSTQLRTDLSGNLDQFEPVAEFVTVATEMQRGQSVP  120

Query  133  FTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATD  192
            FTLS PLR+  RPSL V QPG+YPVL+NVNGTPDYGAPARLD+ARFLLPV+GVPPDQ T+
Sbjct  121  FTLSYPLRAGDRPSLGVQQPGVYPVLINVNGTPDYGAPARLDDARFLLPVLGVPPDQPTE  180

Query  193  FGSA-------VAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGG  245
              SA       V P+T+ PV +T+LWPLADRPRLA GAPGGT PVRLVDD+LA  LA GG
Sbjct  181  AASAADNLNSVVPPDTSDPVQLTVLWPLADRPRLAAGAPGGTTPVRLVDDELATELAPGG  240

Query  246  RLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPG  305
            RLD LLSA +FAT   VD  G V  ALCLA+DPDLL+TVNAMT GYVV+D PD       
Sbjct  241  RLDTLLSAVDFATGPTVDSSGQVRAALCLAVDPDLLVTVNAMTAGYVVNDGPDAGRF---  297

Query  306  TPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADI  365
            TPT PG GQ AA +WL+RLR L  R CV P  +AQADL AL RV D  LSAIAT SPADI
Sbjct  298  TPTRPGAGQEAAIAWLNRLRGLAQRMCVAPTTYAQADLAALHRVGDRGLSAIATTSPADI  357

Query  366  VDRILDVSSTRGATVLPDGPLTGRAINLLSTHGN-TVAVAAADFSPEEQQGSSQIGSALL  424
            VDRIL V + RGAT++ DGPLT  A++LL++ GN TVA+ A   S EE  G+ Q  SA L
Sbjct  358  VDRILGVRTIRGATLVGDGPLTRPALDLLTSQGNRTVAIGATPVSTEET-GTPQ--SADL  414

Query  425  PATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALG  484
                P R SP V  APFDPAVGAALA AGT+P  P+YLDPSL + + H+S  ARRQ ALG
Sbjct  415  ---TPLRYSPTVSVAPFDPAVGAALAGAGTDPVSPSYLDPSLDIPVDHDSQIARRQSALG  471

Query  485  AMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAA  544
            A+LWR L P   PRTQI++PP  WSL  DDAQ ILT +AT I +GLAVPRPL AVIA   
Sbjct  472  ALLWRGLSPELTPRTQIVMPPLVWSLGPDDAQAILTTIATTIHAGLAVPRPLGAVIAQGD  531

Query  545  AR-TEPPEP-PGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPL  602
            A   EP +P P A+    GRF+DDI   I G   RLW LTSALT D+RTGLTGVQYTAPL
Sbjct  532  ALPAEPAQPAPEAFGNPAGRFDDDIIGGIAGVTGRLWGLTSALTTDERTGLTGVQYTAPL  591

Query  603  REDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLA  662
            REDMLRALSQS+P   RN  A+QRL  V ++++D+F AVT+VNPGG+YTLATE SPLP+A
Sbjct  592  REDMLRALSQSVPAAARNAEARQRLGTVVRSVNDMFAAVTVVNPGGAYTLATERSPLPMA  651

Query  663  LHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIEVNFTQRVAVDVSLRTPD  722
            L N L VPIRVRL ++APPGMTV D+G+IELPPGYLPLRVPIEV+FTQRVAVDV+L+T D
Sbjct  652  LRNDLPVPIRVRLHINAPPGMTVTDMGEIELPPGYLPLRVPIEVHFTQRVAVDVTLQTVD  711

Query  723  GVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPT  782
            G+ LGEPVRLSVHSNAYGKVLF ITLSA AVL  LAGRRLWHRFRGQPDRADL     P 
Sbjct  712  GLPLGEPVRLSVHSNAYGKVLFFITLSAGAVLFLLAGRRLWHRFRGQPDRADL----TPP  767

Query  783  GKH  785
            G+H
Sbjct  768  GEH  770


>gi|169632009|ref|YP_001705658.1| hypothetical protein MAB_4936 [Mycobacterium abscessus ATCC 19977]
 gi|169243976|emb|CAM65004.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=771

 Score =  771 bits (1991),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 420/746 (57%), Positives = 524/746 (71%), Gaps = 20/746 (2%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            F++V ID+V P  VTT  +  VTV GTV N GDRPV DV+VRLE A AV +S+ LR SL 
Sbjct  41   FLKVVIDEVNPQTVTTV-DSMVTVRGTVANVGDRPVTDVVVRLERADAVATSSDLRASLH  99

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPD  166
            G  DQ++P  +F+TVA  L++GQ+  F+L+ PLR  T  +  +  PG+YP LVNVNGTPD
Sbjct  100  GHHDQFRPVGEFVTVAGTLEQGQQRPFSLAFPLRGGTGANWNIEAPGVYPALVNVNGTPD  159

Query  167  YGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGG  226
            YGAPARLD+ARFLLPV+GVPP         VAP+T+ PV +T+LWPLADRPRLAPG PGG
Sbjct  160  YGAPARLDDARFLLPVLGVPPPNNAASEPEVAPDTSRPVGLTLLWPLADRPRLAPGQPGG  219

Query  227  TVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNA  286
              PVRL+DD L  SL+ GGRLD LL A EFAT   VDP G + R +C+A+DPDLL+TVN 
Sbjct  220  PTPVRLLDDQLERSLSPGGRLDALLGALEFATEPAVDPKGELARTVCVAVDPDLLVTVNE  279

Query  287  MTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDAL  346
            MT  Y V D+    +  P  P HPGTGQ  A +WLDRLR +   TCVTPLP+AQA LDA+
Sbjct  280  MTQNYQVLDN----SADPAGPVHPGTGQGLAVAWLDRLRAMAKHTCVTPLPYAQASLDAV  335

Query  347  QRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAA  406
              + D  LS  AT   AD++D+IL V S RGAT+L D  L+  +I+LL+  G TVAV+  
Sbjct  336  AEMADDGLSHQATTGAADVLDQILGVVSLRGATLLGDSHLSAASIDLLTAQGPTVAVSPL  395

Query  407  DFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSL  466
               P  Q+          P   PRR+S  +VAAPFDP+VGAAL+A G  P  P Y+  SL
Sbjct  396  ---PSGQETP--------PDFNPRRVSDTLVAAPFDPSVGAALSAVGRTPMTPDYVPQSL  444

Query  467  FVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAI  526
               + H+S  AR QDALGAM W++L P   PR  +L+P A+W L+  +A+ IL+A +T +
Sbjct  445  RFALQHDSRVARIQDALGAMAWQALSPQQTPRQTVLLPDATWDLSDGEARSILSATSTLL  504

Query  527  RSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQ-IGGQVARLWKLTSAL  585
             SGLA+PRPLP +I +A A  +P      +        DD  +Q +G +V R+W LT+AL
Sbjct  505  HSGLAIPRPLPTLIGEARAGAQPNPVDTTFGVDAQEAVDDWVSQGLGDEVRRVWGLTAAL  564

Query  586  TIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVN  645
            T+D RTGLTGVQYT PLR+D LRA+SQS+P D R+  A++RLA + +T+ DLF AVT+VN
Sbjct  565  TVDARTGLTGVQYTDPLRQDALRAVSQSVPADARDDAARERLAAIRRTVGDLFNAVTVVN  624

Query  646  PGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIE  705
            PGGSYTLATEHSPLPL L N L VPIRV L+V+ P GM+  DVG  E+PPG+LP++VP+E
Sbjct  625  PGGSYTLATEHSPLPLVLRNELPVPIRVSLRVETPAGMSATDVGVQEVPPGFLPVKVPVE  684

Query  706  VNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHR  765
            VN +QR+AVDV+L TPDG+ LG+PVRLSVHSNAYGK LF IT+SAA VL  L GRRLWHR
Sbjct  685  VNVSQRMAVDVTLHTPDGLPLGDPVRLSVHSNAYGKPLFFITISAATVLFALTGRRLWHR  744

Query  766  FRGQPDRADLDRPDLPTGKHAPQRRA  791
            FRGQPDRADLDR D P    AP++ A
Sbjct  745  FRGQPDRADLDREDEPA---APEKGA  767


>gi|886312|gb|AAB53128.1| L222-ORF8; putative [Mycobacterium leprae]
Length=512

 Score =  677 bits (1746),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 365/494 (74%), Positives = 409/494 (83%), Gaps = 5/494 (1%)

Query  287  MTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDAL  346
            MTGGY+VS+SPDG AQ PGTPTHPGTGQ AA  WL+RLR L HR CV  LP+AQADLDAL
Sbjct  1    MTGGYIVSNSPDGPAQQPGTPTHPGTGQDAAVIWLNRLRALAHRMCVASLPYAQADLDAL  60

Query  347  QRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAI-NLLSTHGNTVAVAA  405
            QR+ND  LS  AT S  DIVD ILDV+S RG T+LPD PLT R + +LL+ + +TVA+AA
Sbjct  61   QRINDTELSTTATTSVGDIVDHILDVTSIRGVTMLPDSPLTNRVVVDLLNDNNSTVAIAA  120

Query  406  ADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPS  465
            A FS ++    S  GS +   T PRRLSPRVV APFDPAVGAALAAAGT+P VPTYLD S
Sbjct  121  AAFSAQD----STSGSLVDIDTEPRRLSPRVVVAPFDPAVGAALAAAGTDPIVPTYLDSS  176

Query  466  LFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATA  525
            L +RI H+S TARRQDAL ++LWR+LE +AAPR+QILVPP SW L +DDA+V+LT L+T 
Sbjct  177  LNIRIVHDSDTARRQDALSSILWRALERDAAPRSQILVPPTSWHLQADDARVMLTTLSTV  236

Query  526  IRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLTSAL  585
            IRSGLAV RPLP VIADA ART+  +  G+Y++ARGRFNDDI   I  Q+ RLW LTSAL
Sbjct  237  IRSGLAVARPLPTVIADALARTKLSDTVGSYTSARGRFNDDIIADIASQLGRLWGLTSAL  296

Query  586  TIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVN  645
            T D RTGLTGVQYTAPLREDMLRALSQ  PP TRNGLAQQRLAVV KTI DL GAVTIVN
Sbjct  297  TADGRTGLTGVQYTAPLREDMLRALSQLEPPATRNGLAQQRLAVVSKTIKDLIGAVTIVN  356

Query  646  PGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPPGYLPLRVPIE  705
            PGGSY+LATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTV DV QIELPPGYLPLRVPIE
Sbjct  357  PGGSYSLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVTDVSQIELPPGYLPLRVPIE  416

Query  706  VNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHR  765
            VNFTQRVAVDV+L+TP+G+ LGEPVRL VHSNAYGKVLF ITL+AA +L+ LAGRRLWHR
Sbjct  417  VNFTQRVAVDVALQTPEGIQLGEPVRLLVHSNAYGKVLFEITLTAATILIVLAGRRLWHR  476

Query  766  FRGQPDRADLDRPD  779
            FR Q + AD +RPD
Sbjct  477  FRIQTEGADSNRPD  490


>gi|111020632|ref|YP_703604.1| glycoprotein [Rhodococcus jostii RHA1]
 gi|110820162|gb|ABG95446.1| possible glycoprotein [Rhodococcus jostii RHA1]
Length=796

 Score =  581 bits (1498),  Expect = 1e-163, Method: Compositional matrix adjust.
 Identities = 366/754 (49%), Positives = 457/754 (61%), Gaps = 37/754 (4%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            F+++ ID VTP  VTT+S+P VTV+G+V N GDR VRDV VRL+ A AV SS  LRTSL 
Sbjct  48   FLELHIDDVTPSTVTTTSDPFVTVTGSVKNIGDRTVRDVGVRLQRAPAVASSEGLRTSLT  107

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPD  166
                +Y     F TVA  LD GQ   FTLS PLRS T  SL + +PG+YP++VNVNGTP+
Sbjct  108  LDQSRYDTVGMFDTVAGRLDEGQSKQFTLSLPLRSDTDISLDITEPGVYPLMVNVNGTPE  167

Query  167  YGAPARLDNARFLLPVVGVPPDQATDFGS-AVAPETTAPVWITMLWPLADRPRLAPGAPG  225
            YG  ARLD+ARFLLPV GVP       G+ AV P+ ++PV +TM+WPLADRPRLA G PG
Sbjct  168  YGGAARLDDARFLLPVFGVP-------GTPAVPPDISSPVAVTMMWPLADRPRLAAGVPG  220

Query  226  G-TVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITV  284
              T PVRLVDDDLA SLA+GGRLD LL AAEFAT   VD D  +  +LCLA+DPDLLITV
Sbjct  221  SVTEPVRLVDDDLATSLADGGRLDELLGAAEFATRESVDRDHTLRDSLCLAVDPDLLITV  280

Query  285  NAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLD  344
              M  GY+V D P      P    H G G+ AAS+WLDR R+L    C T +PFAQADL 
Sbjct  281  ENMARGYLVVDDPSD----PTGSAHEGAGKDAASAWLDRARSLAASMCTTSVPFAQADLS  336

Query  345  ALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLL-STHGNTVAV  403
            A+  V +P L+A A  +PADIVD +L V+S R       G L      +L      T  V
Sbjct  337  AITEVANPDLTATAVEAPADIVDNVLGVTSLRNFVWSDAGVLDDATAQMLRGDEATTTLV  396

Query  404  AAADFSPEEQQGSSQI-------------GSALLPATAPRRLSPRVVAAPFDPAVGAALA  450
            AA        + S+ +             G     AT     +  V A  FDPAVG ALA
Sbjct  397  AANSIDTTTPRDSAHVIEATPPPAPVPANGETTPAATETPAATGSVDALLFDPAVGTALA  456

Query  451  AAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAA-----PRTQILVPP  505
            A G  P  P+Y        ++ +S TAR QDALGA+ W +LEP AA     PR+ ++VPP
Sbjct  457  AMGATPQTPSYTPERARYDLSDDSQTARLQDALGAVSWSALEPEAARAAGTPRSLMVVPP  516

Query  506  ASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFND  565
              W+  ++DA+ +L+ +++ +RSGLA PRPLPA++       E         AA      
Sbjct  517  QLWTAGAEDAKTLLSTVSSLMRSGLATPRPLPAILGRQPGSPEIATLEYPDQAAEDGVPA  576

Query  566  DITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQ  625
             I      Q  R+  L +AL  D +  LT  ++TAPLRED+LR++S +   D     A++
Sbjct  577  HIRDAAATQTPRIEALNAALVDDPQAPLTPERFTAPLREDLLRSMSLAHRRDDERRSAEE  636

Query  626  ----RLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPP  681
                R   V +T+DDLFGAVT+V+PGG YTLA+E SPL L   N L V I VRLQVDAP 
Sbjct  637  ASDVRADEVAETMDDLFGAVTVVSPGGVYTLASEQSPLLLVARNDLPVGITVRLQVDAPS  696

Query  682  GMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYG  740
            GMT+ D+G   LPP G   L VP E N ++++ V  SL T DG  LGEP  ++V SNAYG
Sbjct  697  GMTITDIGPTTLPPRGSRTLTVPTEANDSRKLVVKFSLTTADGQQLGEPTSVTVRSNAYG  756

Query  741  KVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRAD  774
            + L  +T  A A+L+ LAGRRLWHRFRGQPD AD
Sbjct  757  QALAILTACAGALLLFLAGRRLWHRFRGQPDPAD  790


>gi|325677329|ref|ZP_08156994.1| glycoprotein [Rhodococcus equi ATCC 33707]
 gi|325551792|gb|EGD21489.1| glycoprotein [Rhodococcus equi ATCC 33707]
Length=825

 Score =  568 bits (1465),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 358/772 (47%), Positives = 465/772 (61%), Gaps = 58/772 (7%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            F+++ ID V P  VTT+S+P VTV+GTV N GDRPV DV VRL+ A  V SS  LRTSLD
Sbjct  72   FLELHIDDVAPSTVTTTSDPVVTVTGTVANIGDRPVTDVGVRLQRAPRVDSSEELRTSLD  131

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPD  166
                ++     F+ VA EL  G+   F LS PLRSLT  SL V +PG+YP+LVNVNGTP+
Sbjct  132  MDQGEFDVVGPFVQVASELAEGERKQFVLSLPLRSLTGSSLDVTEPGVYPLLVNVNGTPE  191

Query  167  YGAPARLDNARFLLPVVGVP------PD---QATDFG--SAVAPETTAPVWITMLWPLAD  215
            YG  ARLD+ARFLLPV+G+P      P+   Q T+    + V P+T+APV +TMLWPLAD
Sbjct  192  YGGQARLDDARFLLPVLGLPRAAGSAPETTPQVTENSPTAPVPPDTSAPVALTMLWPLAD  251

Query  216  RPRLAPGAPGG-TVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCL  274
            RPRLA G PG  T  VRLVDD+LA SL++GGRLD LL+AAE+AT  +VD D  +  +LCL
Sbjct  252  RPRLAAGVPGSVTEKVRLVDDELAGSLSSGGRLDQLLAAAEYATGPDVDRDRRLTDSLCL  311

Query  275  AIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVT  334
            A+DPDLLITV+ MT GY+V D P     +P  P   GTG AAA++WLDRL+ L    C+T
Sbjct  312  AVDPDLLITVSNMTQGYLVVDDP----AVPNGPAREGTGSAAAAAWLDRLKELARTMCIT  367

Query  335  PLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLL  394
             +PF Q DL AL RV++  L+  A  +PADIVD IL V+S R  T    G L   +  LL
Sbjct  368  SVPFGQVDLSALSRVDETSLTDSALRAPADIVDSILGVTSLRNVTWPDSGVLDDASAQLL  427

Query  395  STHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGT  454
               G T  + AA+         S++  A   A A       V A  FD + GAALAA G 
Sbjct  428  HGIGPTTTLLAANAVESSATAGSKVVVAGGGADA-------VTAGLFDVSTGAALAAVGA  480

Query  455  NPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAP------------RTQIL  502
            +P  P+Y+       +  +S TAR QDALGAM W +L+   +             R  ++
Sbjct  481  DPQTPSYVPDRARYNVDGDSRTARLQDALGAMSWTALQSTGSTEGSARRANQPPDRPMLI  540

Query  503  VPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGR  562
            VPP  WS   D+A  +L+  +T +RSGLA P+PL      A    +PP  P   S A   
Sbjct  541  VPPQLWSADGDEAAAVLSTASTLLRSGLATPKPL------ARVAEQPPTSPDPSSLAYPE  594

Query  563  FN------DDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPP  616
                      +   +G Q  R+ +L  AL  D +  LT  ++ APLRED+LRA++ +   
Sbjct  595  QAIVDGTPQSVEKGVGAQAPRIDELMDALVDDPQAALTPTRFLAPLREDLLRAMTLAGRS  654

Query  617  DTRNG-------LAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAV  669
            + +NG       +AQQR+  V  TID ++ +VTI+ PGG YTLA+E SPL L   N L V
Sbjct  655  E-QNGADVAADTVAQQRVDAVATTIDGMYASVTILAPGGVYTLASEQSPLLLVARNELPV  713

Query  670  PIRVRLQVDAPPGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGE  728
             I V+L+VDAP  M + D+G  +LPP G   L+VP E+  ++ + VD SL T  G +LGE
Sbjct  714  AITVQLRVDAPAEMHITDIGPQQLPPRGSRSLQVPAEIADSRTMVVDFSLATESGQSLGE  773

Query  729  PVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRAD--LDRP  778
               ++V SNAYG+ L  IT  A A+L+ LAGRRLWHRFRGQPD+AD   +RP
Sbjct  774  QTSVTVRSNAYGQALAIITACAGALLLFLAGRRLWHRFRGQPDKADEGYERP  825


>gi|312142008|ref|YP_004009344.1| integral membrane protein [Rhodococcus equi 103S]
 gi|311891347|emb|CBH50668.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=825

 Score =  566 bits (1459),  Expect = 5e-159, Method: Compositional matrix adjust.
 Identities = 357/772 (47%), Positives = 464/772 (61%), Gaps = 58/772 (7%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            F+++ ID V P  VTT+S+P VTV+GTV N GDRPV DV VRL+ A  V SS  LRTSLD
Sbjct  72   FLELHIDDVAPSTVTTTSDPVVTVTGTVANIGDRPVTDVGVRLQRAPRVDSSEELRTSLD  131

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPD  166
                ++     F+ VA EL  G+   F LS PLRSLT  SL V +PG+YP+LVNVNGTP+
Sbjct  132  MDQGEFDVVGPFVQVASELAEGERKQFVLSLPLRSLTGSSLDVTEPGVYPLLVNVNGTPE  191

Query  167  YGAPARLDNARFLLPVVGVP------PD---QATDFG--SAVAPETTAPVWITMLWPLAD  215
            YG  ARLD+ARFLLPV+G+P      P+   Q T+    + V P+T+APV +TMLWPLAD
Sbjct  192  YGGQARLDDARFLLPVLGLPRAAGSAPETTPQVTENSPTAPVPPDTSAPVALTMLWPLAD  251

Query  216  RPRLAPGAPGG-TVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCL  274
            RPRLA G PG  T  VRLVDD+LA SL++ GRLD LL+AAE+AT  +VD D  +  +LCL
Sbjct  252  RPRLAAGVPGSVTEKVRLVDDELAGSLSSSGRLDQLLAAAEYATGPDVDRDRRLTDSLCL  311

Query  275  AIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVT  334
            A+DPDLLITV+ MT GY+V D P     +P  P   GTG AAA++WLDRL+ L    C+T
Sbjct  312  AVDPDLLITVSNMTQGYLVVDDP----AVPNGPAREGTGSAAAAAWLDRLKELARTMCIT  367

Query  335  PLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLL  394
             +PF Q DL AL RV++  L+  A  +PADIVD IL V+S R  T    G L   +  LL
Sbjct  368  SVPFGQVDLSALSRVDETSLTDSALRAPADIVDSILGVTSLRNVTWPDSGVLDDASAQLL  427

Query  395  STHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGT  454
               G T  + AA+         S++  A   A A       V A  FD + GAALAA G 
Sbjct  428  HGIGPTTTLLAANAVESSATAGSKVVVAGGGADA-------VTAGLFDVSTGAALAAVGA  480

Query  455  NPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAP------------RTQIL  502
            +P  P+Y+       +  +S TAR QDALGAM W +L+   +             R  ++
Sbjct  481  DPQTPSYVPDRARYNVDGDSRTARLQDALGAMSWTALQSTGSTEGSARRANQPPDRPMLI  540

Query  503  VPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGR  562
            VPP  WS   D+A  +L+  +T +RSGLA P+PL      A    +PP  P   S A   
Sbjct  541  VPPQLWSADGDEAAAVLSTASTLLRSGLATPKPL------ARVAEQPPTSPDPSSLAYPE  594

Query  563  FN------DDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPP  616
                      +   +G Q  R+ +L  AL  D +  LT  ++ APLRED+LRA++ +   
Sbjct  595  QAIVDGTPQSVEKGVGAQAPRIDELMDALVDDPQAALTPTRFLAPLREDLLRAMTLAGRS  654

Query  617  DTRNG-------LAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAV  669
            + +NG       +AQQR+  V  TID ++ +VTI+ PGG YTLA+E SPL L   N L V
Sbjct  655  E-QNGADVAADTVAQQRVDAVATTIDGMYASVTILAPGGVYTLASEQSPLLLVARNELPV  713

Query  670  PIRVRLQVDAPPGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGE  728
             I V+L+VDAP  M + D+G  +LPP G   L+VP E+  ++ + VD SL T  G +LGE
Sbjct  714  AITVQLRVDAPAEMHITDIGPQQLPPRGSRSLQVPAEIADSRTMVVDFSLATESGQSLGE  773

Query  729  PVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRAD--LDRP  778
               ++V SNAYG+ L  IT  A A+L+ LAGRRLWHRFRGQPD+AD   +RP
Sbjct  774  QTSVTVRSNAYGQALAIITACAGALLLFLAGRRLWHRFRGQPDKADEGYERP  825


>gi|226362875|ref|YP_002780655.1| hypothetical protein ROP_34630 [Rhodococcus opacus B4]
 gi|226241362|dbj|BAH51710.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=800

 Score =  553 bits (1426),  Expect = 4e-155, Method: Compositional matrix adjust.
 Identities = 359/756 (48%), Positives = 457/756 (61%), Gaps = 39/756 (5%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            F+++ ID VTP  VTT+++P VTV+G+V N GDR VRDV VRL+ A AV SS  LRTSL 
Sbjct  50   FLELHIDNVTPSTVTTTTDPIVTVTGSVKNIGDRTVRDVSVRLQRAPAVASSEGLRTSLT  109

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPD  166
                +Y     F TVA  LD GQ   FTLS PLRS T  SL + +PG+YP++VNVNGTP+
Sbjct  110  LDQSRYDTVGMFDTVAGRLDEGQSKQFTLSLPLRSDTDLSLDITEPGVYPLMVNVNGTPE  169

Query  167  YGAPARLDNARFLLPVVGVPPDQATDFGS-AVAPETTAPVWITMLWPLADRPRLAPGAPG  225
            YG  ARLD+ARFLLPV GVP       GS AV P+ ++PV ITM+WPLADRPRLA G  G
Sbjct  170  YGGAARLDDARFLLPVFGVP-------GSPAVPPDISSPVAITMMWPLADRPRLAAGVAG  222

Query  226  G-TVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITV  284
              T PVRLVDDDLA+SL +GGRLD LL AAEFAT   VD D  +  +LCLA+DPDLLITV
Sbjct  223  SVTEPVRLVDDDLASSLDDGGRLDELLGAAEFATRESVDRDHTLRDSLCLAVDPDLLITV  282

Query  285  NAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLD  344
              MT GY+V D P      P    H G G+ AA++WL+R R+L    C T +PFAQADL 
Sbjct  283  ENMTRGYLVVDDPSD----PTGSAHEGAGKDAAAAWLERARSLAASMCTTSVPFAQADLS  338

Query  345  ALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVA  404
            A+  + +  L+A A  +PADIVD +L V+S R       G L      +L     T A+ 
Sbjct  339  AISEIGNADLTATAVDAPADIVDNVLGVTSLRNFVWSDAGVLDDATAQMLRGDDATTALV  398

Query  405  AAD----FSPEEQQGSSQIGSALLPATAPR------------RLSPRVVAAPFDPAVGAA  448
            AA+     +P +     +                          +  V A  FDP+VG A
Sbjct  399  AANSVDTTTPRDSAHVIEATPPPATPVPANGETTTPAATETPTATGSVDALLFDPSVGTA  458

Query  449  LAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAA-----PRTQILV  503
            LAA GT P  P+Y        ++ +S TAR QDALGA+ W +LEP AA     PRT ++V
Sbjct  459  LAAMGTTPQTPSYTPQRARYDLSDDSQTARMQDALGAVSWSALEPEAARAAGVPRTLMVV  518

Query  504  PPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRF  563
            PP  W+  +DDA+ +L+ +A+ +RSGLA PRPLPA++       E         AA    
Sbjct  519  PPQLWTAGADDAKTLLSTVASLMRSGLATPRPLPAMLGRQPGSPEVASLDYPDQAAEDGV  578

Query  564  NDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLA  623
               I      Q+ R+  L +AL  D +  LT  + TAPLRED++R++S +   D     A
Sbjct  579  PAHIRDAAATQMPRIEALNAALVGDPQAPLTPERLTAPLREDLVRSMSLAHRRDDERRSA  638

Query  624  QQ----RLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDA  679
            ++    R   V +T+DD+FGAVT+V+PGG YTLA+E SPL L   N L V I VRLQVDA
Sbjct  639  EEASDTRADEVAETMDDMFGAVTVVSPGGVYTLASEQSPLLLVARNDLPVGITVRLQVDA  698

Query  680  PPGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNA  738
            P GMT+ D+G   LPP G   L VP E N ++++ V+ SL T DG  LGEP  ++V SNA
Sbjct  699  PSGMTITDIGPTTLPPRGSRTLTVPTEANDSRKLVVNFSLTTADGQQLGEPTSVTVRSNA  758

Query  739  YGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRAD  774
            YG+ +  +T  A A+L+ LAGRRLWHRFRGQPD AD
Sbjct  759  YGQAVAILTACAGALLLFLAGRRLWHRFRGQPDPAD  794


>gi|226309499|ref|YP_002769461.1| hypothetical protein RER_60140 [Rhodococcus erythropolis PR4]
 gi|226188618|dbj|BAH36722.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=784

 Score =  536 bits (1380),  Expect = 8e-150, Method: Compositional matrix adjust.
 Identities = 360/802 (45%), Positives = 468/802 (59%), Gaps = 70/802 (8%)

Query  12   ARVTSAIGVVAGLGMALTVPS-AAPHALAGEPSPT------PFVQVRIDQVTPDVVTTSS  64
            A V + +    G G A T  S AAP +   E +P        F+Q+ ID   P  VTT+S
Sbjct  8    AGVAALVMAAVGFGPATTAVSWAAPSSQPSERAPARNTNDAKFLQLTIDSTAPTTVTTTS  67

Query  65   EPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPE  124
            + +V V GTV N GDRPV DV VRL+ A A+ SS+ +R +LD     +    +F TVA  
Sbjct  68   DRNVVVKGTVKNVGDRPVEDVGVRLQRAPAIDSSSDVRAALDFDQAVFDTVGEFDTVATT  127

Query  125  LDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVG  184
            LD GQ   FTL+ PLRS T  SL + +PG+YP+LVNVNGTP+YG  ARLD+ARFLLPV+G
Sbjct  128  LDTGQSKQFTLTLPLRSTTGLSLDITEPGVYPMLVNVNGTPEYGGAARLDDARFLLPVLG  187

Query  185  VPPDQATDFGSA---------VAPETTAPVWITMLWPLADRPRLAPGAPGG-TVPVRLVD  234
            VP    ++  S          V P+T+AP+ +T++WPLAD PRL  G PG    PVRL+D
Sbjct  188  VPAAAESNATSGTPSSSATAVVPPDTSAPIGVTLMWPLADAPRLVGGIPGAVNEPVRLID  247

Query  235  DDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVS  294
            D+LA  L++GGRLD L+ A E AT  E D D  V  ALCLAIDPDLLITV  MT GY+V+
Sbjct  248  DELATELSDGGRLDALVDAVENATKPESDTDRRVTDALCLAIDPDLLITVENMTRGYLVA  307

Query  295  DSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRL  354
            D+    +  P  P+H G G  AA+ WL R++TL    C T +PFAQADL A+  V +P L
Sbjct  308  DN----SSDPTGPSHEGRGSDAANQWLGRVKTLASSMCTTAVPFAQADLAAVTSVANPEL  363

Query  355  SAIATISPADIVDRILDVSSTRGATVLPD-GPLTGRAINLLSTHGNTVAVAAADFSPEEQ  413
            +A A   PADIVD IL V+S R   V PD G L      +LS +  T  VA         
Sbjct  364  TATALARPADIVDNILGVTSLRD-FVWPDSGVLDSATAEVLSVNPTTAMVADTSVDSAAP  422

Query  414  QGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHE  473
            Q SS+I  +L              A  FD +  AALAA G+ P VP+Y+       I  E
Sbjct  423  QLSSRITGSL-------------DALAFDTSAAAALAATGSEPQVPSYIPDDTAPTIDIE  469

Query  474  SITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVP  533
            S +ARRQDALGAM W +L P + PR QI  PP  W+  S+DA  +L+ LAT IRSGLA P
Sbjct  470  SRSARRQDALGAMAWAALTPTSLPRNQIFAPPQLWTADSNDATAVLSMLATLIRSGLASP  529

Query  534  RPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVA----------RLWKLTS  583
            + LPA++            PGA  AA   + D   TQ G Q +          R+  L +
Sbjct  530  QALPALLG---------RQPGATDAATLDYPDR-ATQDGPQTSVVETATTQLPRIDGLEA  579

Query  584  ALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRN----------GLAQQRLAVVGKT  633
            +L  D    LT   +TAPLRED+LR+++ +   D RN            A  R   V + 
Sbjct  580  SLVDDPAASLTPRGFTAPLREDLLRSMTLA---DRRNVDSASVNRAERAATIRADNVTEA  636

Query  634  IDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIEL  693
            +D ++ AV++V+PGG YTLA+  SPL L   N L + I V L+V+APP M ++D+G  +L
Sbjct  637  VDGMYRAVSVVSPGGVYTLASGQSPLLLVARNELPIAINVDLRVEAPPEMQISDIGPKQL  696

Query  694  PP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAA  752
            PP G   L VP E+N ++++ V+ SL T DG  LG P  ++V SNAYG+ L A+T +A  
Sbjct  697  PPRGSRQLTVPAEMNDSRKLEVNFSLTTTDGRQLGTPTSVTVRSNAYGRPLAAVTATAGG  756

Query  753  VLVTLAGRRLWHRFRGQPDRAD  774
            +L+ LAGRRLWHRF+GQPD AD
Sbjct  757  LLLFLAGRRLWHRFKGQPDPAD  778


>gi|229491222|ref|ZP_04385050.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229321960|gb|EEN87753.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=782

 Score =  535 bits (1379),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 359/802 (45%), Positives = 468/802 (59%), Gaps = 70/802 (8%)

Query  12   ARVTSAIGVVAGLGMALT-VPSAAPHALAGEPSPT------PFVQVRIDQVTPDVVTTSS  64
            A V + +    G G A T V  AAP +   E +P        F+Q+ ID   P  VTT+S
Sbjct  6    AGVAALVMAAVGFGPATTAVAGAAPSSQPSERAPARNTSDAKFLQLTIDSTAPTTVTTTS  65

Query  65   EPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPE  124
            + +V V GTV N GDRPV DV VRL+ A A+ SS+ +R +LD     +    +F TVA  
Sbjct  66   DRNVVVKGTVKNVGDRPVEDVGVRLQRAPAIDSSSDVRAALDFDQAVFDTVGEFDTVATT  125

Query  125  LDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVG  184
            LD GQ   FTL+ PLRS T  SL + +PG+YP+LVNVNGTP+YG  ARLD+ARFLLPV+G
Sbjct  126  LDTGQSKQFTLTLPLRSTTGLSLDITEPGVYPMLVNVNGTPEYGGAARLDDARFLLPVLG  185

Query  185  VPPDQATDFGSA---------VAPETTAPVWITMLWPLADRPRLAPGAPGG-TVPVRLVD  234
            VP    ++  +          V P+T+AP+ +T++WPLAD PRL  G PG    PVRL+D
Sbjct  186  VPAAAESNATAGTPSSSATAVVPPDTSAPIGVTLMWPLADAPRLVGGIPGAVNEPVRLID  245

Query  235  DDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVS  294
            D+LA  L++GGRLD L+ A E AT  E D D  V  ALCLAIDPDLLITV  MT GY+V+
Sbjct  246  DELATELSDGGRLDALVDAVENATKPESDTDRRVTDALCLAIDPDLLITVENMTRGYLVA  305

Query  295  DSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRL  354
            D+    +  P  P+H G G  AA+ WL R++TL    C T +PFAQADL A+  V +P L
Sbjct  306  DN----SSDPTGPSHEGRGSDAANQWLGRVKTLASSMCTTAVPFAQADLAAVTSVANPEL  361

Query  355  SAIATISPADIVDRILDVSSTRGATVLPD-GPLTGRAINLLSTHGNTVAVAAADFSPEEQ  413
            +A A   PADIVD IL V+S R   V PD G L      +LS +  T  VA         
Sbjct  362  TATALTRPADIVDNILGVTSLRD-FVWPDSGVLDSATAEVLSVNPTTAMVADTSVDSAAP  420

Query  414  QGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHE  473
            Q SS+I  +L              A  FD +  AALAA G+ P VP+Y+       I  E
Sbjct  421  QLSSRITGSL-------------DALAFDTSAAAALAATGSEPQVPSYIPDDTAPTIDIE  467

Query  474  SITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQVILTALATAIRSGLAVP  533
            S +ARRQDALGAM W +L P + PR QI  PP  W+  S+DA  +L+ LAT IRSGLA P
Sbjct  468  SRSARRQDALGAMAWAALTPTSLPRNQIFAPPQLWTADSNDATAVLSMLATLIRSGLASP  527

Query  534  RPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVA----------RLWKLTS  583
            + LPA++            PGA  AA   + D   TQ G Q +          R+  L +
Sbjct  528  QALPALLG---------RQPGATDAATLDYPDR-ATQDGPQTSVVETATTQLPRIDGLEA  577

Query  584  ALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRN----------GLAQQRLAVVGKT  633
            +L  D    LT   +TAPLRED+LR+++ +   D RN            A  R   V + 
Sbjct  578  SLVDDPAASLTPRGFTAPLREDLLRSMTLA---DRRNVDSASVNRAERAATIRADNVTEA  634

Query  634  IDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIEL  693
            +D ++ AV++V+PGG YTLA+  SPL L   N L + I V L+V+APP M ++D+G  +L
Sbjct  635  VDGMYRAVSVVSPGGVYTLASGQSPLLLVARNELPIAINVDLRVEAPPEMQISDIGPKQL  694

Query  694  PP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAA  752
            PP G   L VP E+N ++++ V+ SL T DG  LG P  ++V SNAYG+ L A+T +A  
Sbjct  695  PPRGSRQLTVPAEMNDSRKLEVNFSLTTTDGRQLGTPTSVTVRSNAYGRPLAAVTATAGG  754

Query  753  VLVTLAGRRLWHRFRGQPDRAD  774
            +L+ LAGRRLWHRF+GQPD AD
Sbjct  755  LLLFLAGRRLWHRFKGQPDPAD  776


>gi|54027632|ref|YP_121874.1| hypothetical protein nfa56580 [Nocardia farcinica IFM 10152]
 gi|54019140|dbj|BAD60510.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=850

 Score =  471 bits (1212),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 327/796 (42%), Positives = 440/796 (56%), Gaps = 87/796 (10%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            FV++ +D VTP  VT SS+P +TV+GTVTN GDR V DV VRL+ AAAV++ + LR++L 
Sbjct  44   FVKLSVDSVTPSTVTASSDPVLTVAGTVTNIGDRVVEDVSVRLQRAAAVSAPSELRSALQ  103

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPD  166
                 Y+ A  F  V  +L+ GQ   FT++ PLRS    SL + +PG+YPVL+NVNG P 
Sbjct  104  LDQVNYEIAGPFEDVVSQLNPGQRRQFTVTLPLRSDAAASLQITEPGVYPVLLNVNGVPA  163

Query  167  YGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGG  226
            YG  ARLD+ARFLLPV+ + P  AT+    V P   APV  TMLWPLADRPRL  GAPG 
Sbjct  164  YGGQARLDDARFLLPVLSL-PQTATEGHPPVPPPAGAPVATTMLWPLADRPRLVAGAPGS  222

Query  227  T-VPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVN  285
                V L DD+LA SL  GGRLD LL + E         +  +  ++CLA+DPDLL+TV 
Sbjct  223  VDGQVELTDDELAASLGKGGRLDQLLGSLEAVLGSGPTRNRELASSICLAVDPDLLVTVQ  282

Query  286  AMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDA  345
            AMT GY V  SP      P   T  GTG   A++WLDRLR +    C   LPF Q D+ A
Sbjct  283  AMTNGYRVLASPSD----PDGATREGTGAEQATAWLDRLRAIAPSLCTVALPFGQVDVTA  338

Query  346  LQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAA  405
            L  VNDP LSA A  +PA+IVD +L V S RG ++   G +   A  LL  HG   AV A
Sbjct  339  LAAVNDPELSARALDAPAEIVDSVLGVRSVRGVSLPDAGTIDTAAGMLLRRHGFATAVLA  398

Query  406  ---------ADFSPEEQQGSSQIGSALLPATAPRRLSPRVVA------------------  438
                        S +  +G    G    PA A  RL P V A                  
Sbjct  399  DSATAPLGTVGASADLDEGYYADGETTAPAPALVRL-PEVTAPQAPEHGAPASEPAPAGA  457

Query  439  ----------------------APFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESIT  476
                                  A FD     ALAA G+NP  P++    +   + ++S +
Sbjct  458  TSVVAGAPAEPPAAAPDPALRVATFDIWSATALAAVGSNPPTPSFTPSGVRYEVTNDSRS  517

Query  477  ARRQDALGAMLWRSLEPNA-APRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRP  535
            AR QDALGA+ WR+L P A  PR+ +++PP  W + +D+A  +L  + + +R+GLA PR 
Sbjct  518  ARLQDALGAVSWRALNPQAPGPRSLLVMPPQQWGVNADEATELLRQVESLMRAGLATPRA  577

Query  536  LPAVIADAAARTEPPEPP---------GAYSAARGRFNDDITTQIGGQVARLWKLTSALT  586
               ++A      +PP+P               A  RF + I  Q G ++  L++   ++ 
Sbjct  578  FTDLLA------QPPDPEPYELDLLPRATTDGAPARFVEPIREQ-GRRITDLFR---SMV  627

Query  587  IDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNG-------LAQQRLAVVGKTIDDLFG  639
                   +  ++  PLR+D+LR LS S   D R G        AQ+RL    +T+D+L+ 
Sbjct  628  DVPEIQPSPREFVTPLRDDLLRVLSLS---DRRTGNSGQPDAWAQRRLDQTTRTVDNLYR  684

Query  640  AVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPP-GYL  698
            +VT++ PGG+YTLATE SPL L   N L V IR+R +++ P G  + D+G+ +LPP G  
Sbjct  685  SVTVLPPGGAYTLATEQSPLLLVARNDLPVAIRIRFRIEVPDGAEITDLGEQQLPPKGTR  744

Query  699  PLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLA  758
              RVP +VN ++++ + +S+ T DGV LGE   +SV SNAYG+ L  +T  A  +L  LA
Sbjct  745  SFRVPTQVNDSRKLVIPISMTTADGVLLGESTSVSVRSNAYGQTLAIMTACAGLLLFLLA  804

Query  759  GRRLWHRFRGQPDRAD  774
            GRRLWHRFRG+PD AD
Sbjct  805  GRRLWHRFRGKPDPAD  820


>gi|343928712|ref|ZP_08768157.1| hypothetical protein GOALK_120_01400 [Gordonia alkanivorans NBRC 
16433]
 gi|343761461|dbj|GAA15083.1| hypothetical protein GOALK_120_01400 [Gordonia alkanivorans NBRC 
16433]
Length=875

 Score =  434 bits (1116),  Expect = 3e-119, Method: Compositional matrix adjust.
 Identities = 303/810 (38%), Positives = 421/810 (52%), Gaps = 96/810 (11%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            F ++ ID ++P +VTT+S P VTVSG V N GDR + ++ +RLE   AV S++ LRT L 
Sbjct  47   FARIVIDSMSPSIVTTTSRPVVTVSGRVDNIGDRSISNLSIRLERGDAVGSASGLRTQLA  106

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRP---SLAVNQPGIYPVLVNVNG  163
                    A  F  ++  L  G+  GF +S  L + + P    L ++  G+YP+ VNVNG
Sbjct  107  DDDPAVAVAGPFEALSESLAPGESVGFRMSMALSAGSGPDGQGLGISATGVYPMQVNVNG  166

Query  164  TPDYGAPARLDNARFLLPVVGVPPDQ--ATDFGSAVAPET------------------TA  203
            TPDYG PA++  +R LLPV+ +PPD+  A D+    A ET                   +
Sbjct  167  TPDYGNPAQVAGSRMLLPVLSLPPDEIRARDYVDPTADETGSPSVPGLGPDGSVSADLAS  226

Query  204  PVWITMLWPLADRPRLAPGAPGG-TVPVRLVDDDLANSLANGGRLDILLSAAEFATN---  259
            P  +TMLWP+A  P+LAPG  GG T PVRL+++D+A SL  GGRL+ LL A +       
Sbjct  227  PARMTMLWPMAAPPQLAPGVLGGSTEPVRLINEDMARSLDTGGRLNELLKALQKVVGAPP  286

Query  260  RE---------------------VDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPD  298
            RE                     V     +  ++CLAIDPDL++TV AM+ GY VS +P 
Sbjct  287  REQSGPPSSEPPAESPAEPAPVAVPGSEKLAESMCLAIDPDLVVTVRAMSLGYEVSTNPA  346

Query  299  GAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIA  358
                 P +   PG G   A  WLD LR    R CV  LPFAQADL +L R+ +  L+  A
Sbjct  347  D----PTSAARPGNGSEIAGRWLDDLRWTASRMCVVALPFAQADLTSLARIGNTGLTEAA  402

Query  359  TISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQ  418
               PADIVD IL V S RG +V    P  G   +  +      AV +   +      +S 
Sbjct  403  LRKPADIVDAILGVRSVRGLSV----PALGAIDDAGADALAEAAVTSTALA-----SNSV  453

Query  419  IGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITAR  478
            + +     T   R+  R+ A  FD  + A+LAA GT P+ P     S  V +  ES  +R
Sbjct  454  VPTGRRDDTGRYRVG-RLTAQTFDAPITASLAAIGTAPSTPALTPESQQVDLTDESTGSR  512

Query  479  RQDALGAMLWRSL---EPNAAP----------RTQILVPPASWSLASDDAQVILTALATA  525
            RQ A+ A+ + ++   +P++A           R+  LVPP  WS    D+  +       
Sbjct  513  RQSAIAALAYPAIVAPQPDSADGSNPRIPVAGRSAFLVPPTYWSPTVADSDALFATARLL  572

Query  526  IRSGLAVPRPLPAVIAD---AAARTEPPEPPGAYSAARGRFNDDITTQIGGQVAR----L  578
            + SG A P PLP+++ +   A A      PPG      GR    +T+Q    + R     
Sbjct  573  LESGAATPTPLPSLVQELNTAGATGRLTNPPGVGPV--GRVGSVLTSQATAAIRRNVEDS  630

Query  579  WKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNG--------LAQQRLAVV  630
            W+   AL        T  +Y +PLRED LRA+     PD            L ++R+  V
Sbjct  631  WQFEGALVRSADVAATPERYMSPLREDQLRAIRS---PDVEGSAVYTHLRRLQEERIDAV  687

Query  631  GKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQ  690
              T+  L  +VTI++PGG YTLA+E SP+ LA+ N LA+P+R RL   AP G+ + D+G 
Sbjct  688  ASTLHRLGQSVTILDPGGRYTLASERSPVLLAVRNDLALPVRARLTTSAPEGIEIGDLGV  747

Query  691  IELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLS  749
            IE+P  G   +++P     ++ + +D+ L T  GV LG+P+ L VH+NAYGK LF IT+ 
Sbjct  748  IEIPARGTRQIQLPTRGETSEAITIDIRLATVTGVPLGQPITLQVHTNAYGKPLFYITIV  807

Query  750  AAAVLVTLAGRRLWHRFRGQPDRADLDRPD  779
            A   LV L  RRLWHRFRGQPD AD DRP+
Sbjct  808  AGVALVLLTARRLWHRFRGQPDPADADRPE  837


>gi|333922221|ref|YP_004495802.1| glycoprotein [Amycolicicoccus subflavus DQS3-9A1]
 gi|333484442|gb|AEF43002.1| Glycoprotein [Amycolicicoccus subflavus DQS3-9A1]
Length=794

 Score =  423 bits (1088),  Expect = 6e-116, Method: Compositional matrix adjust.
 Identities = 310/788 (40%), Positives = 433/788 (55%), Gaps = 48/788 (6%)

Query  24   LGMALTVPSAA----PHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGD  79
            LG+ LTV S +    P A     +  P   V ID V P VVT +S P + V+GT+TN   
Sbjct  12   LGLILTVTSGSAFGQPGADDARTAADPLT-VAIDSVAPPVVTPNSSPTLVVTGTITNNSG  70

Query  80   RPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPL  139
              + D  VRL+ AAAV  S  LR + +     Y+     + V   +D G+ A FT++ P 
Sbjct  71   STISDAAVRLQRAAAVNESEGLRRTGELTEADYRIITPTVPVGASIDPGESARFTITFPY  130

Query  140  RSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVP------PDQATDF  193
            RS T  +L +  PG+YP+LV+   T   G   R D ARFLLPV+G+P      P+  +  
Sbjct  131  RSETGNALHIPAPGVYPLLVSTTATTSGGVGLRSDTARFLLPVIGLPRSVSEAPESDSAN  190

Query  194  GSA----VAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDI  249
            G+     V P    P+ IT+LWPLA+ P++APG  G    +RL+DD LA SL+ GG LD 
Sbjct  191  GAVSDAPVMPTVRRPLPITLLWPLAETPKIAPGGTGDGRNLRLLDDSLAGSLSAGGHLDE  250

Query  250  LLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTH  309
             L+A E A  R  +    +  ++CLAIDPDLLI V+AM  GY V+  P      P   T 
Sbjct  251  ALTALEDAIGRNGESAAQLAESVCLAIDPDLLIAVDAMQPGYQVAVDPAD----PTGVTR  306

Query  310  PGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRI  369
            PG G AAAS WL RLR L    C   LP+ Q DL+AL R+ +   +A A ++P+DI+  +
Sbjct  307  PGAGAAAASEWLARLRQLSEDVCTVALPYGQVDLEALARLGNSDFTARALVTPSDILAAV  366

Query  370  LDVSSTRGATVLPDGPLTGRAINLLS-THGNTVAVAAADFSPEEQQGSSQIGSALLPATA  428
            L     R  T+   G L+ ++  +L+ T G T  VA+   + +    + Q+ ++    + 
Sbjct  367  LGTEPVRAVTLPESGLLSEQSAGMLADTTGGTALVASNQVALDS---ADQVRNSFARVSL  423

Query  429  PRRLSPR--VVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARR-QDALGA  485
            P   +P   + A  FDPA   ALAA G +P VP+Y+  S   R A ++   +R  DALGA
Sbjct  424  PDAANPDRALTATLFDPATAGALAAVGGSPQVPSYV--SGGSRDAAQAPRLQRMHDALGA  481

Query  486  MLWRSLEPNA------APRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAV  539
            ++W +L  N        P++ ++VPP +W +   +   IL  +     +GL VP PL  V
Sbjct  482  LVWPALAANGNGPDGPGPQSLMVVPPQNWRIDIAEGSAILQTVTQLFSAGLIVPAPLDGV  541

Query  540  IADAAARTEPPEPPGAYSAAR--GRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQ  597
             A AAAR   PE    Y       R +DD+   +      L +L SAL  D    LT   
Sbjct  542  TA-AAARNNHPEGIVQYPQQNDSDRVSDDVLEPLSVTARELEQLRSALVTDPNLPLTPDA  600

Query  598  YTAPLREDMLRALSQS----LPP------DTRNGLAQQRLAVVGKTIDDLFGAVTIVNPG  647
            + APL  D+LRAL+ +    + P       + +  A+ RL  V  T++ L   VT++NPG
Sbjct  601  FLAPLWGDLLRALTSADRRVITPAGGTDHSSADAAARLRLDTVQNTLNFLHTQVTVLNPG  660

Query  648  GSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPP-GYLPLRVPIEV  706
            G YTLA+  SPL L   N L VP++VRLQV APPG+ +AD+G  +LPP  +  L +P EV
Sbjct  661  GVYTLASGQSPLLLVARNDLPVPVQVRLQVSAPPGIEIADLGVEQLPPRSHRQLSIPTEV  720

Query  707  NFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRF  766
            + T++ AVD+ L TPD   LGE +R+SV S AYG+++  +T  A A+L+ LAGRRLWHRF
Sbjct  721  SHTRQFAVDIQLTTPDHHVLGEAIRISVRSTAYGQIMTILTACAGALLLALAGRRLWHRF  780

Query  767  RGQPDRAD  774
            RGQPD AD
Sbjct  781  RGQPDPAD  788


>gi|296141889|ref|YP_003649132.1| glycoprotein [Tsukamurella paurometabola DSM 20162]
 gi|296030023|gb|ADG80793.1| glycoprotein [Tsukamurella paurometabola DSM 20162]
Length=831

 Score =  422 bits (1084),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 327/793 (42%), Positives = 440/793 (56%), Gaps = 69/793 (8%)

Query  47   FVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLD  106
            FV++ I ++TP V T  S   VTV GT+TN GDR V D+ VR++ A A+ +S+ LR+ L 
Sbjct  33   FVRIAIAEITPQV-TADSPNDVTVRGTITNFGDRDVSDLEVRVQRAPAIAASSQLRSDLV  91

Query  107  GGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLR---SLTRPSLAVNQPGIYPVLVNVNG  163
               + Y     F  VA  L  GQ++ FTL+ P+R   + T P+LA+++PG+YP+LVNVNG
Sbjct  92   ADNNVYDTMGRFQPVASVLKPGQKSEFTLTIPVRRDRTTTGPTLAIDRPGVYPLLVNVNG  151

Query  164  TPDYGAPARLDNARFLLPVVGVPPDQATDF----GSAVAPETTAPVWITMLWPLADRPRL  219
             P YG  ARLD++R +LPV+ +P           G    P T +P  +T+LWPLAD P+L
Sbjct  152  KPAYGGVARLDDSRTMLPVLALPDTDGAGGSPADGELDKPVTNSPAQMTVLWPLADNPKL  211

Query  220  APGAPGG-TVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRA-LCLAID  277
            A G PGG   PVRLVDD LA SLA GGRLD LL+A E AT R  DP     RA  CLAID
Sbjct  212  AGGVPGGGDAPVRLVDDALAGSLAAGGRLDGLLAAYEQAT-RGPDPRHTAMRAGSCLAID  270

Query  278  PDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLP  337
            PDLL+TV AMTG Y VS +P      P  PT  GTG   AS+WL RLR +   +CV  LP
Sbjct  271  PDLLVTVQAMTGPYRVSRNPAD----PRGPTTAGTGSDEASAWLARLRQVAEDSCVVALP  326

Query  338  FAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTH  397
            F Q DL+AL R  +P L   A  + AD++D +L V S RG T+   G L G         
Sbjct  327  FGQVDLEALGRSGEPSLQRAALGNSADVIDSVLGVKSVRGVTLPTSGLLLGDGARQSVAS  386

Query  398  GNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAA-AGTNP  456
             N+ AV AA       +G +   + ++P      +   + AA FDP V  ALAA  GTN 
Sbjct  387  DNSAAVVAATAVGAPARGRAS-ANGIVP------VGQGIGAALFDPYVTTALAALGGTNG  439

Query  457  TVPTYLDP--------SLFVRIAHESITARRQDALGAMLWRSLEPNA--AP---------  497
                 + P        S+   +  ES  +RRQ A+GA+   +L+P    AP         
Sbjct  440  NAERGVSPGAAGSTPQSVTFDLDQESEVSRRQAAVGAVTAAALDPTQRYAPPNGWAATTA  499

Query  498  ---------RTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTE  548
                     R  ++VPP  W+   DDA+ IL A ++   +G+A PR    V+A A +   
Sbjct  500  TDPVATVTGRASLIVPPQVWAAGPDDAKAILDAASSLFTAGIAGPRTFRDVVASAQSAGR  559

Query  549  PP----------EPPGAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQY  598
             P          +P G  ++   R  D I T     V ++ +L +AL    +T LT   Y
Sbjct  560  DPASAADPWTLRQPTGTVAS---RVPDRIVTDAADHVRQVDRLGAALMPLPKTPLTPRVY  616

Query  599  TAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSP  658
            T+PLRED +RAL  S      +G A  R+     ++     +V I++PGG+YTLA++ SP
Sbjct  617  TSPLREDAVRALRWSPARAAVDGDATIRMTAARASLSAQLSSVNILSPGGTYTLASDKSP  676

Query  659  LPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVS  717
            L LA  N L +PIR  ++V AP G  +      ELP  G   + +P   N +++VAV +S
Sbjct  677  LLLAARNDLPLPIRTVIKVGAPDGFAIDASEVQELPARGTRQIELPTTANDSRQVAVQLS  736

Query  718  LRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDR  777
            LRT   + LGEP+++SVHSNAYG+ LF IT +A  +LV L+GRRLW RFRG+PDRAD DR
Sbjct  737  LRTTSDMPLGEPIQISVHSNAYGRPLFWITCAAGVLLVLLSGRRLWRRFRGRPDRADADR  796

Query  778  PDLPTGKHAPQRR  790
            P  P  +H  +RR
Sbjct  797  P--PADEH--ERR  805


>gi|326383890|ref|ZP_08205574.1| hypothetical protein SCNU_13193 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326197349|gb|EGD54539.1| hypothetical protein SCNU_13193 [Gordonia neofelifaecis NRRL 
B-59395]
Length=868

 Score =  421 bits (1081),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 309/825 (38%), Positives = 428/825 (52%), Gaps = 70/825 (8%)

Query  34   APHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAA  93
            AP A A   SPT +  + + +VTP  VT+SS   VTV G + NT  R + DV VRL+   
Sbjct  16   APIARADPSSPTAYATLGLTEVTPSTVTSSSGDTVTVRGRIVNTAGRSISDVDVRLQRGN  75

Query  94   AVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPG  153
            AVT S  LR+SL   + Q+   +    V   L  G+   F ++ P+       L +   G
Sbjct  76   AVTESYQLRSSLTSPSAQFGVTSSTTRVTGTLRAGKSVDFAITVPVSGAG--GLGLTSSG  133

Query  154  IYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQAT--DF-----GS----------A  196
            +YP++V+V GTP       + ++R LLPV+ +P D+A   D+     GS          +
Sbjct  134  VYPLMVDVTGTPHDSGTVSIADSRTLLPVLSLPADRARARDYVDPASGSPGVPLLGRDGS  193

Query  197  VAPETTAPVWITMLWPLADRPRLAPGA-PGGTVPVRLVDDDLANSLANGGRLDILLSAAE  255
            +AP TT+P   TM+WPLA  P+ A G   GGT  +RL+ D L +SL   GRL + L A E
Sbjct  194  IAPNTTSPAAFTMIWPLAASPQEAAGVLGGGTSKLRLISDSLGHSLQPDGRLGMALQALE  253

Query  256  F-----ATNREVDP--------DGAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQ  302
                   T  +  P        D  V  ++CLA+DPDL+ TV +M  GY +++ P     
Sbjct  254  SLAGVDGTASDQAPTTAGGPPSDDPVRDSVCLAVDPDLISTVKSMADGYAITEDPAD---  310

Query  303  LPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISP  362
             P  PTH G G A A+SWL  L  +  R CVT LP+AQA LD+L+ +ND  L+  A +SP
Sbjct  311  -PEAPTHDGQGAATAASWLHDLTQVASRMCVTALPYAQAGLDSLRTINDADLAKRAVLSP  369

Query  363  ADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHG-NTVAVAAADFSPEEQQGSSQIGS  421
             D VD +L V + RG TV   G LT    +LL+  G  + A+A+    P +   +   G+
Sbjct  370  YDAVDALLGVKTVRGLTVPATGTLTSDGRDLLTELGVQSAAIASTSLVPLDADRAPDSGT  429

Query  422  ALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQD  481
                  + R  S  V    +D AV AAL  AG  P VP  +       ++ ES  +RRQ 
Sbjct  430  P-----SGRYRSQGVRLQSYDVAVSAALGGAGLTPVVPAIMPNWQQPNLSSESAVSRRQT  484

Query  482  ALGAMLWRSLE-PNAAP-------------RTQILVPPASWSLASDDAQVILTALATAIR  527
            A  A+ +  L+ P A P             R+  ++PP  WS    DAQ +    A  + 
Sbjct  485  AAAALAFPMLDAPPAQPNGESGDADLPTTGRSSFVMPPTYWSPTVQDAQALRDTAALMLS  544

Query  528  SGLAVPRPLPAVI-----ADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARLWKLT  582
            SG A P PL  VI     A+A AR E P      +AA           +  ++ R+  L 
Sbjct  545  SGTARPVPLSTVIDEMPAANATARLETPGDIQPDAAAGYPITQTDGETVRQRLDRIDHLQ  604

Query  583  SALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTR--NGLAQQRLAVVGKTIDDLFGA  640
            +AL  +  T  T  +Y APLR+D+LRA+S +   D     G   +RL  VG T+ ++   
Sbjct  605  AALVGNADTVTTPAEYMAPLRDDLLRAVSSASTTDNSVARGQRDERLTAVGATLTNMQQG  664

Query  641  VTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELPP-GYLP  699
            V++++P G YTLA+E SPL L + N LA+PIRVRL +DAP  + V DVG +E+P  G   
Sbjct  665  VSLLDPSGRYTLASERSPLLLVVRNTLALPIRVRLDIDAPSSLEVGDVGTVEIPAAGTRQ  724

Query  700  LRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAVLVTLAG  759
            L++P     ++   V +SL T   V L  PV LSV++NAYGK LF IT+ AAA+L+ L  
Sbjct  725  LQIPTHATSSEPATVHISLVTSSDVPLSTPVELSVYANAYGKPLFWITIGAAAILILLTA  784

Query  760  RRLWHRFRGQPDRADLDRP-----DLPTGKHAPQRRAVASRDDEK  799
            RRLWHRFRG+PD AD DRP     DL     + Q R  A R  E+
Sbjct  785  RRLWHRFRGEPDPADEDRPEPDEDDLEQATLSYQYRLAAERAAEE  829


>gi|262204640|ref|YP_003275848.1| hypothetical protein Gbro_4842 [Gordonia bronchialis DSM 43247]
 gi|262087987|gb|ACY23955.1| hypothetical protein Gbro_4842 [Gordonia bronchialis DSM 43247]
Length=905

 Score =  381 bits (978),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 306/851 (36%), Positives = 422/851 (50%), Gaps = 113/851 (13%)

Query  39   AGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSS  98
            AG      F ++ +D +TP +VTT+S P VTV+G V NT DR VRD+ +RLE  AAVTS+
Sbjct  42   AGTDERISFARIVVDTLTPTIVTTTSAPVVTVAGHVDNTSDRTVRDLTIRLERGAAVTSA  101

Query  99   TALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVL  158
              LR+SL         A  F  +   L  G  A FT++ PL   T   L +++PG+YP+ 
Sbjct  102  AGLRSSLAVDHPPVAAAGGFRRLTDTLAPGGRADFTITMPLS--TADGLQISRPGVYPLQ  159

Query  159  VNVNGTPDYGAPARLDNARFLLPVVGVPPDQ----------ATDFGS------------A  196
            VNVNG PDYG+ A++  +R LLPV+ +PPD             D G+            +
Sbjct  160  VNVNGVPDYGSTAQVAGSRTLLPVLSLPPDADRASGYVQPATEDSGTTDDDIPGLGPDGS  219

Query  197  VAPETTAPVWITMLWPLADRPRLAPGAPG-GTVPVRLVDDDLANSLANGGRLDILLSAAE  255
            V+   ++P  +TMLWPLA  P+LA G  G GT PVRL+ +DLA SL +GGRL  LL+A  
Sbjct  220  VSANLSSPARMTMLWPLAAPPQLAAGVLGAGTEPVRLISEDLARSLGDGGRLANLLAALS  279

Query  256  FATNREVDPDGAVGRA----------------------------LCLAIDPDLLITVNAM  287
                    P G  G +                            LCLAID DLL+TV AM
Sbjct  280  AVVGSP--PPGTSGTSESTGDSGSDSSEPNSPQPPPAAAPLAGGLCLAIDSDLLVTVRAM  337

Query  288  TGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQ  347
            + GYVVS  P      P + T  GTG   A+ WL  LR +  + CV  LPFAQ DL +L 
Sbjct  338  SLGYVVSTDPGD----PRSSTVEGTGSDTATRWLAELRRVASKLCVVALPFAQVDLTSLA  393

Query  348  RVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLS-THGNTVAVAAA  406
            RV +  LSA A  SPAD+VD IL V S R   V   G +      +L+      VAV+  
Sbjct  394  RVGNTALSAAALTSPADVVDAILGVRSIRNLAVPAVGAIDADGAGVLTGARVPGVAVSTG  453

Query  407  DFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAAGTNPTVPTYLDPSL  466
               P+ Q     +           RL    VA  ++  + AAL   GT+P++PT      
Sbjct  454  SIRPQSQPDDGGL----------YRLDGLGVAT-YEAPITAALGGLGTSPSIPTITPADQ  502

Query  467  FVRIAHESITARRQDALGAMLWRSLEPNAAPR-----------------TQILVPPASWS  509
             V +A ES  +RRQ AL A+ + ++    +PR                   ++VPP  WS
Sbjct  503  VVDLAAESDLSRRQAALAALAYPAISAPLSPRPGSPSSDDDAATPVAGRGALIVPPTYWS  562

Query  510  LASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPP----EPPGAYSAAR--GRF  563
                DA  +       + +G A     P+++ +A  R   P     PPG    +R     
Sbjct  563  PTVADADALFDTARLLVDAGAASAESFPSLV-EAVERARTPARLRNPPGVGPISRLSSVL  621

Query  564  NDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRN---  620
                T  I       W+L  +L        T  +Y +PLRED+LRA+     PD      
Sbjct  622  TPTTTAAIRDDAETSWQLQGSLVSSADVDATPERYLSPLREDLLRAMRS---PDVAGEPA  678

Query  621  -----GLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRL  675
                 G   QR++ V  T+  +   VTI++PGG YTLA+E SPL L + N L +P+RV++
Sbjct  679  RAYLTGQQSQRVSAVSSTLQGMRSQVTILDPGGRYTLASERSPLLLVVRNDLDLPVRVKI  738

Query  676  QVDAPPGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSV  734
                P  + V DVG +E+P  G   +++P     ++  +V ++L T  G+ LGEP+ LS+
Sbjct  739  ATTGPADLDVGDVGVVEIPANGTRQIQLPTRAESSEATSVVITLSTVTGLPLGEPITLSL  798

Query  735  HSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPD------LPTGKHAPQ  788
             SNAYG+VLF +T+ A   LV L  RRLWHRFRG+PD ADLDRP+      L  G    +
Sbjct  799  RSNAYGRVLFIVTIVAGVALVLLTARRLWHRFRGEPDPADLDRPEPDELERLLAGSSYQE  858

Query  789  RRAVASRDDEK  799
            RR     ++E+
Sbjct  859  RRRTLQHEEER  869


>gi|886311|gb|AAB53127.1| L222-ORF7; putative [Mycobacterium leprae]
Length=286

 Score =  345 bits (884),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 183/255 (72%), Positives = 208/255 (82%), Gaps = 0/255 (0%)

Query  1    VTALQLGWAALARVTSAIGVVAGLGMALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVV  60
            +TA +L  AA   +   + +VA   + L  P+A PHA A EP  T FV+VRID+VTPDVV
Sbjct  1    MTASRLRLAASLSIALVVDIVASFAVLLVAPTATPHAAADEPRATSFVRVRIDKVTPDVV  60

Query  61   TTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLT  120
            TTSSEP VTVSG VTN GDRPVRD+MVRLEH +AV SS  LRT LD G DQ+Q AADF+T
Sbjct  61   TTSSEPVVTVSGVVTNIGDRPVRDLMVRLEHESAVISSAVLRTYLDDGADQFQTAADFVT  120

Query  121  VAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLL  180
            VA EL RGQEAGFTL AP+RS T+PS+A++QPGIYPVLVNVNGTPDYG PARLDNARFLL
Sbjct  121  VAEELQRGQEAGFTLVAPIRSTTKPSMAIDQPGIYPVLVNVNGTPDYGTPARLDNARFLL  180

Query  181  PVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANS  240
            PV GVPP ++    SAVAP+ T PVWITMLWPLADRPRL+PGAPGGT+PVRLVDDDLA+S
Sbjct  181  PVAGVPPAKSDAMDSAVAPDITKPVWITMLWPLADRPRLSPGAPGGTIPVRLVDDDLASS  240

Query  241  LANGGRLDILLSAAE  255
            LA GGRLDILL+AAE
Sbjct  241  LAPGGRLDILLTAAE  255


>gi|317509434|ref|ZP_07967052.1| collagen alpha-2(I) protein [Segniliparus rugosus ATCC BAA-974]
 gi|316252263|gb|EFV11715.1| collagen alpha-2(I) protein [Segniliparus rugosus ATCC BAA-974]
Length=769

 Score =  322 bits (825),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 272/787 (35%), Positives = 384/787 (49%), Gaps = 73/787 (9%)

Query  32   SAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEH  91
            SA P      PS   F+++ +D  + D+VT+ S+  V VSG + N  DRPV +V  RL+ 
Sbjct  24   SAEPQTRDRSPS---FLRISLDPASLDMVTSGSDNAVVVSGEIENFSDRPVTEVEARLQR  80

Query  92   AAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQ  151
            A AV  +T L  SL    + Y     F  VA  +    +A F L+ PLR     SL +  
Sbjct  81   APAVLDATQLGVSLAEPEETYDTLGPFQQVADRIPAHGKARFHLALPLRG-QGDSLQIPN  139

Query  152  PGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAP-ETTAPVWITML  210
            PG+YP+LVNVNGTPD G  ARLD+ RFLLPV+G+P  +    G A  P +   P  + ++
Sbjct  140  PGVYPMLVNVNGTPDSGVHARLDDLRFLLPVLGLPSTK----GEAAQPAKIDHPTRLGIV  195

Query  211  WPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGR  270
             PLAD PR A G+  G   VRL DD+LAN L   GRL +L+   +   + E     ++ +
Sbjct  196  VPLADHPRWAAGSVEGGGLVRLTDDELANELVPDGRLGVLVEGLDALRHAEEQTRRSLRQ  255

Query  271  ALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHR  330
            A+C+A+DPDLL TVNAMTG Y+V   P G   L       G G AAA  WL +LR+ +  
Sbjct  256  AICVAVDPDLLRTVNAMTGDYLVP-GPQGGLVL-------GKGSAAARDWLAKLRSALVG  307

Query  331  TCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRA  390
             CVT LPFA ADL AL ++ DP+L  +A     D VD +L V+S R   V  +  +    
Sbjct  308  QCVTALPFAHADLAALAQIGDPKLLKVAFDQAEDYVDNVLSVASVRDLMVAANTRIDKTT  367

Query  391  INLLSTHG-NTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAAL  449
            I +L+  G +TV    +   PEE                 R L P +    FD A+ A L
Sbjct  368  IEMLAAKGFHTVLTPRSTDRPEEG----------------RSLGPGIAGVHFDSAISALL  411

Query  450  AAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNA---APRT---QILV  503
               G  P   +                A+RQ A+ A+LW +L+P++    P T   ++LV
Sbjct  412  GDLGNRPGPSS----------PPGDPVAQRQSAVAAVLWPALQPSSPGQLPTTGGLELLV  461

Query  504  PPASWSLASDDAQVILTALATAIRSGLAV---------PRPLPAVIADAAAR-TEPPEPP  553
            PPA WS +S D   ++ A + A+++G+A          PR      + ++ R  E  EP 
Sbjct  462  PPAVWSPSSADLDALVFAASIALQAGIAKPISWNPASGPRAFGGSASASSVRGIEVTEPK  521

Query  554  GAYSAARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQS  613
                   G   DD    +G     + +L   +       +T  +Y     E +LR LS  
Sbjct  522  TLAKPLAGGLVDD----VGQARGVIGELVEGVVDQPDDPITSERYEKGWEEQLLRVLSGG  577

Query  614  LPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRV  673
              P      AQ R+  +   +D   G+V +V+PG  YTL TE   LP+ + NGL V +RV
Sbjct  578  --PSAAG--AQGRMDELRAALDSATGSVRLVDPGKPYTLFTEQGSLPVVVRNGLPVSMRV  633

Query  674  RLQVDAPPGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRL  732
            +    AP G+ V+ +    +P  G   L +P +V   +   V + L+T  G+ LG PV +
Sbjct  634  QFTAKAPSGVEVSAIAPETVPAHGSRVLSLPAKVKAPKLSPVQIELQTISGLKLGNPVTV  693

Query  733  SVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDRADLDRPDLPTGKHA----PQ  788
            SV S  Y  +L  IT     +L+TL G RLW R  G+       +PD    K A     +
Sbjct  694  SVQSGRYTGLLAVITALIGGLLLTLMGLRLWRRLTGKGRPGGRLKPDEHDRKMAGLGFKE  753

Query  789  RRAVASR  795
            R  V SR
Sbjct  754  RAMVESR  760


>gi|296392449|ref|YP_003657333.1| glycoprotein [Segniliparus rotundus DSM 44985]
 gi|296179596|gb|ADG96502.1| glycoprotein [Segniliparus rotundus DSM 44985]
Length=772

 Score =  305 bits (782),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 261/762 (35%), Positives = 370/762 (49%), Gaps = 69/762 (9%)

Query  27   ALTVPSAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVM  86
            AL+  SA P      PS   F+++ +D  + ++VTT  E  V V G + N  D+PV DV 
Sbjct  22   ALSSASAEPQTRDRAPS---FLRISLDPASLNMVTTGGEDAVDVDGEIENFSDKPVTDVE  78

Query  87   VRLEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPS  146
             RL+ A AV  +  L  SL    + Y     F  +A  +    +A F LS PLR  +  S
Sbjct  79   ARLQRAPAVLDAAGLAASLTDPEETYDTLGPFQLIAEHIAAHAKARFHLSLPLRG-SADS  137

Query  147  LAVNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVW  206
            L +  PG+YP+LVNVNGTPD G  ARLD+ RFLLPV+G+P   A     A   +   P  
Sbjct  138  LQIPNPGVYPMLVNVNGTPDSGVHARLDDLRFLLPVLGLP---AAPGLPAQPAKIDRPAR  194

Query  207  ITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDG  266
            + ++ P AD PR APG+  G   VRL DD+LA  LA  GRL +LL+  E   +       
Sbjct  195  LGLVLPFADEPRWAPGSIEGDGLVRLTDDELAGELAPDGRLGVLLAGFERLRHAAEPTAN  254

Query  267  AVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRT  326
            A+ + +C+A+DPDLL TVNAMTG Y+V    DG           G G AAA  WL RLR 
Sbjct  255  ALRQGVCVAVDPDLLRTVNAMTGDYLVQSPRDGLVA--------GKGSAAARDWLARLRA  306

Query  327  LVHRTCVTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPL  386
                 CV  +PFA ADL AL +  DP+L  IA     D VD  L V+S RG  V  +  +
Sbjct  307  ATAGQCVVAMPFAHADLAALAQSADPQLQKIALDQAGDFVDNFLSVTSVRGLIVSANTRI  366

Query  387  TGRAINLLSTHG-NTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAV  445
                 ++LS  G +TV    A   P+  +                 L P + A  FD   
Sbjct  367  GKPVADMLSAKGFHTVLTPRATELPDASEA----------------LGPGLAAVHFDSTT  410

Query  446  GAALAAAGT--NPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLE---PNAAPRT-  499
               L + G+  +P +P             +  TA+RQ A+ A+LW +L+   P   P T 
Sbjct  411  STLLGSLGSRNSPGLPP------------QDRTAQRQSAVAALLWPALQSSNPGQLPTTG  458

Query  500  --QILVPPASWSLASDDAQVILTALATAIRSGLAVP---RPLPAVIADAAARTEPPEPPG  554
              ++LVPP+ WS +  D   ++ A + A+++G+A P    P+    A  A      E   
Sbjct  459  GLELLVPPSVWSPSQADFDALIFAASIALQAGIAKPISWNPVSGPRAFGAGANATAEQEV  518

Query  555  AYSAARGRFND------DITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLR  608
            A +A +           D   Q+ G V    +L + +       +T  +Y     E +LR
Sbjct  519  AVAAPKTLLKPLPGSVIDAANQVRGVVD---QLAAGIVDQPDDPMTAERYARSWNEQLLR  575

Query  609  ALSQSLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLA  668
             L+     D     A +R+  +G  +D    +V  V+PG  YTL TE   LP+ + NGL 
Sbjct  576  TLASGPSADG----APERMDRLGSALDAATASVCPVDPGKPYTLFTEDGSLPVVVRNGLP  631

Query  669  VPIRVRLQVDAPPGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALG  727
            V +RV+L V AP G+ V+ +G   +P  G   L +P  V   +   V++ LRT  G+ LG
Sbjct  632  VSMRVQLAVRAPSGVEVSALGPETVPAHGSRVLSLPARVKAPKLSPVEIELRTVSGLNLG  691

Query  728  EPVRLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQ  769
              V +SV S+ Y  ++  +T    A+L+ L  RRLW R  G+
Sbjct  692  NLVTVSVQSSQYRGLVAVVTAVVGALLLALMARRLWRRITGK  733


>gi|256381057|ref|YP_003104717.1| hypothetical protein Amir_7081 [Actinosynnema mirum DSM 43827]
 gi|255925360|gb|ACU40871.1| hypothetical protein Amir_7081 [Actinosynnema mirum DSM 43827]
Length=764

 Score =  279 bits (713),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 244/730 (34%), Positives = 352/730 (49%), Gaps = 64/730 (8%)

Query  42   PSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTAL  101
            P P  F+++ ++Q++P VV   S   VT+SG VTN GDR +RD+ +RLE   A+T    +
Sbjct  58   PQPQTFLRLDVEQLSPRVVMAGSSDSVTISGKVTNVGDRLLRDIDLRLERGNALTKEEEV  117

Query  102  RTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYPVLVNV  161
            RT+L  G D       F  +A +L+RG+   FTL+ PL      SL V++PGIYPVL N+
Sbjct  118  RTALREGADSEVEQPLFTKIADKLERGESKDFTLTVPLHGNDPKSLRVDEPGIYPVLANI  177

Query  162  NGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAP  221
            NGTPD+G  ARL     LLPV+ VP       G +          +T+LWPLADRPRL  
Sbjct  178  NGTPDFGGRARLAALSTLLPVLTVP-------GGSTQNAPGGGSRLTLLWPLADRPRLVE  230

Query  222  GAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLL  281
              PG      L DD+LA SLA GGRL  LL   + A       DG +  ++CLA+DPDLL
Sbjct  231  QLPGDRSV--LTDDELAASLARGGRLYGLLEGYKSAL------DGELTGSVCLAVDPDLL  282

Query  282  ITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQA  341
             TV  M+ GY V                 G G   A  WLD+LR  V   CV  L  A A
Sbjct  283  RTVKIMSQGYQVRG------------LGAGKGADDAKLWLDQLRRQVSGKCVVALADADA  330

Query  342  DLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLP-DGPLTGRAINLLSTHGNT  400
            DL AL R     L++ A    A +V  +L+        V P DG L    ++ L+  G T
Sbjct  331  DLVALNRAGLGDLASNALTEGAQVVGDVLESQKPLQGVVWPEDGVLDQATLDRLTGQGVT  390

Query  401  VAVAAADFSPEEQQGSSQIGSALLPATAPRRLS-PRVVAAPFDPAVGAALAAAGTNPTVP  459
              V       E+   +   G+  +     ++ S  RV     D  VG+A   AG      
Sbjct  391  GLVL------EQPAVAGTTGTGPVTVGGDKKASAARVDTMVSDALVGSASPIAGAT----  440

Query  460  TYLDPSLFVRIAHESITARRQDALGAMLWRS-LEPNAAPRTQILVPPASWSLASDDAQVI  518
                       A        Q+AL A+ +R+  + N   +  ++ PP  W+    +  + 
Sbjct  441  ----------TASTEQAVSVQNALAALAFRTGFQGN--DQNVVVAPPRRWNAPEGEISMF  488

Query  519  LTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVARL  578
            L  + + +  G A P  L +++      T P     A S        +++  +  ++AR 
Sbjct  489  LQTMKSLVAGGYAKPAGLESLL-----DTTPGGQSAALSYPVEAGATEVSPAVTTELARA  543

Query  579  WK----LTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRNGLAQQRLAVVGKTI  634
            W+    + SA++  D          APLR  +LRA S +   D     A++ L +    I
Sbjct  544  WRGVQDIASAMSQQDAEAAKPEDLVAPLRLALLRAASGAWRGD--EAAARRALTIGLDRI  601

Query  635  DDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELP  694
            D L   VT+  P     L +++SPLP+ + N L V + VR+ V+  PG+TV  +  + LP
Sbjct  602  DGLESQVTVAEPASPILLGSDNSPLPVNISNKLDVRVTVRVVVEDVPGVTVTQMPDLVLP  661

Query  695  P-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAV  753
              G   + VP+E     + +V V L TP+G+ LG+  RL V SN+YG +   IT +AAA+
Sbjct  662  ARGARQVMVPLEALRFGKFSVHVRLTTPNGIELGDRARLEVSSNSYGTITIVITGAAAAL  721

Query  754  LVTLAGRRLW  763
            LV L+GRR++
Sbjct  722  LVLLSGRRIY  731


>gi|331700376|ref|YP_004336615.1| hypothetical protein Psed_6674 [Pseudonocardia dioxanivorans 
CB1190]
 gi|326955065|gb|AEA28762.1| hypothetical protein Psed_6674 [Pseudonocardia dioxanivorans 
CB1190]
Length=784

 Score =  271 bits (693),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 257/749 (35%), Positives = 353/749 (48%), Gaps = 61/749 (8%)

Query  41   EPSPTPFVQV--RIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSS  98
            EP   P V V   +DQ+TP V T      VTV+GT+ N+G  PV  + VRL+   A+ ++
Sbjct  29   EPDAGPAVSVDLALDQLTPRVATLDGPTFVTVTGTIRNSGALPVSQLGVRLQRGDALRTA  88

Query  99   TALRTSLDG--GTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQPGIYP  156
            + + ++L G  GTD   PA  F+ V   L  G    F++ APLR      LA+++PG YP
Sbjct  89   SDVESALAGRAGTDTVTPA--FVDVPGTLAPGDTVHFSVEAPLRGTGGSGLAIDRPGTYP  146

Query  157  VLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATD--FGSAVAPETTAPVW-ITMLWPL  213
            +LVNVNG PD    ARL   R LLPV+ +P D A D     AV   TT P    TML+P+
Sbjct  147  LLVNVNGEPDGQPRARLAATRMLLPVLSLPAD-AVDGALEPAVPATTTGPARPFTMLYPI  205

Query  214  ADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRA-L  272
             D P   PG PG T    L DDDLA S A GGRLD L+SA       +  P G+  R+ +
Sbjct  206  VDVPHRLPGVPGET--TTLTDDDLARSFAPGGRLDGLVSALA-----QRAPSGSALRSGI  258

Query  273  CLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTC  332
            C+A+DPDLL T  AM  GY V  +        G    PG+G  AA  WL  L + V   C
Sbjct  259  CVAVDPDLLQTAEAMAEGYQVRGA--------GGALTPGSGADAARQWLAALTSTVRGGC  310

Query  333  VTPLPFAQADLDALQRVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAIN  392
            V  LPFA ADL AL R      +A A     D+   ILD     G     DG +    ++
Sbjct  311  VVALPFADADLVALARGGQGTTAAEAVTGGRDVAADILDTPLQTGILWPADGVVDDETVD  370

Query  393  LLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAALAAA  452
             L+       +     S +   GS + G        P R  P  +    DP + AA A  
Sbjct  371  ALAGSARLTGLV---LSADGIAGSGRSG------VVPLREGPSALLT--DPLLTAA-ATP  418

Query  453  GTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQ----------IL  502
            GT+  VPT     +       S     QD +G + +R+    +A              +L
Sbjct  419  GTD--VPTGSGAPVASSAVPVSTPLSTQDTIGTLAFRATSGGSASAAGTSGTSGQAPLVL  476

Query  503  VPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGR  562
             PP  W      A  +L+A +  + +GL VPRPL A  A     T        Y    G 
Sbjct  477  APPHLWGADGAGADALLSAASLLVDNGLLVPRPLSATGATGRDATL------LYPLQAGG  530

Query  563  FNDDITT--QIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPDTRN  620
                 TT  ++G  +A +  +++A   +    +T      PLR  MLR +S S     R 
Sbjct  531  DEIPATTVDRVGALIADVDSMSAAAIEEPGADVTPAAVFDPLRRSMLRPVSASW--RGRP  588

Query  621  GLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQVDAP  680
             LA     +    +D+L G V ++ P G Y+L T  +PL L + NGL V + VR+ + + 
Sbjct  589  ALAATAADLAAIRLDELRGTVRVLEPPGPYSLGTSDAPLLLTVSNGLPVALDVRVVIAST  648

Query  681  PGMTVADVGQIELPP-GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAY  739
             G+ V+ +    +PP G + +RV  +V    + AVD  ++TP G  LG P RL V S AY
Sbjct  649  AGLQVSPIPDQRVPPLGRIQVRVSAQVVRAGQFAVDAIVQTPKGDILGPPTRLQVRSTAY  708

Query  740  GKVLFAITLSAAAVLVTLAGRRLWHRFRG  768
            G V   +T+ A  +LV L  RR+  R +G
Sbjct  709  GTVTVWLTVIAGGLLVLLVARRILRRVKG  737


>gi|257057898|ref|YP_003135730.1| hypothetical protein Svir_39620 [Saccharomonospora viridis DSM 
43017]
 gi|256587770|gb|ACU98903.1| hypothetical protein Svir_39620 [Saccharomonospora viridis DSM 
43017]
Length=706

 Score =  241 bits (615),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 227/756 (31%), Positives = 354/756 (47%), Gaps = 89/756 (11%)

Query  32   SAAPHALAGEPSPTPFVQVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEH  91
            S  P A A    P   +QVRI+ +TP VV+ + +  + ++  VTN GDRP+ D++  ++ 
Sbjct  23   SVTPSASAQSSDPRTLLQVRIEHMTPRVVS-AGDTELRITAEVTNVGDRPITDIVAAVQV  81

Query  92   AAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLAVNQ  151
                T+S  L  +L          + ++ V+  LD+G  A  +++APL       L +++
Sbjct  82   GPRQTTSAQLAQTLVEPPPATAGESAWVGVSDRLDKGASAQLSITAPL-----AQLGLHE  136

Query  152  PGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLW  211
            PG+YP+L+N+NGTP YG  ARL     LLPV           G + +    AP  ++MLW
Sbjct  137  PGVYPLLLNINGTPAYGGTARLAAVDLLLPV----------LGGSGSARGGAPTAVSMLW  186

Query  212  PLADR-PRLAPGAPG-GTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVG  269
            P A R P++   +   G V   L DD+LA  LA GGRL  L+SAAE         + A+ 
Sbjct  187  PFAAREPKVVSVSHDRGAV---LSDDELAGELAPGGRLHSLVSAAESQRG-----NAALF  238

Query  270  RALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVH  329
             +LC A+DPDLL TV+AM+ GY V  +  G  +        G G+  A  WL  LR LV 
Sbjct  239  DSLCFAVDPDLLETVDAMSKGYRVR-TESGIVE--------GKGREHAERWLADLRALVA  289

Query  330  RTCVTPLPFAQADLDALQRV-NDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTG  388
              CV  LP+A ADL AL ++ ++  L   A  + A I+  +L+++  R   + P G L+ 
Sbjct  290  NHCVVELPYAGADLGALTQIPSEIDLVNEAVTNDATIL-HLLNITP-RSGVLWPGGGLSP  347

Query  389  RAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAVGAA  448
             A+   +  G T  + A   +  E QG+                  R+V   +DP V A 
Sbjct  348  AALQEAADAGVTTVITAP--TAVENQGA------------------RLVT--YDPLVRAG  385

Query  449  LAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAMLWRS-LEPNAAPRTQILVPPAS  507
             A A T  +             A E      Q A+ A+  R+ L   A     ++ PP  
Sbjct  386  FALASTRGSGAAR---------ATEQPEVATQSAVAAVALRAGLGGEATEHPVLVAPPHD  436

Query  508  WSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPG----------AYS  557
            W+++  +   +L +L     +GL  P  L  V++     T  PE PG          +  
Sbjct  437  WNVSHTELTNMLDSLGRLQEAGLVNPTSLDEVLS-----TVGPETPGDTGTSGTPQASNP  491

Query  558  AARGRFNDDITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSLPPD  617
             +     DD+   +    +    L SA+++D    +  +    PL + ++RA SQ+   D
Sbjct  492  GSSTSLPDDVLETLSDVESTAADLQSAMSVDPTRQVEPISLIQPLHKAVIRATSQAWRDD  551

Query  618  TRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIRVRLQV  677
                +A +   V  + +  L   +T+  P    +LA+  SPLP+ L N L V + VR++ 
Sbjct  552  GDYRIAAK---VAQRQVRQLSSKITVSTPSQPVSLASASSPLPVTLSNDLPVAVTVRIKF  608

Query  678  DAPPGMTVADVGQIELPPGYLPLR-VPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHS  736
            D  PG+  + +    L       R +P E     R  V+VSL TP G  LG+  R+ + S
Sbjct  609  DNSPGLRPSKIEDTPLAANSRVSRLIPAETLRAGRFIVNVSLSTPGGTTLGQTSRMELTS  668

Query  737  NAYGKVLFAITLSAAAVLVTLAGRRLWHRFRGQPDR  772
            + +G V   +T +A A LV L+GRR++ R + Q + 
Sbjct  669  SEFGVVTVVLTATAGAALVLLSGRRIYRRMKTQGEE  704


>gi|134103799|ref|YP_001109460.1| glycoprotein [Saccharopolyspora erythraea NRRL 2338]
 gi|291005743|ref|ZP_06563716.1| glycoprotein [Saccharopolyspora erythraea NRRL 2338]
 gi|133916422|emb|CAM06535.1| possible glycoprotein [Saccharopolyspora erythraea NRRL 2338]
Length=768

 Score =  238 bits (606),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 221/725 (31%), Positives = 324/725 (45%), Gaps = 71/725 (9%)

Query  49   QVRIDQVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVRLEHAAAVTSSTALRTSLDGG  108
            ++ + ++TP VV   + P VTV+GT+TNT  R + DV  R++     TS  A + ++  G
Sbjct  25   RLEVSKITPSVVGAGAPPEVTVTGTLTNTSSRAIHDVEARIQRGDPTTSEAAAQRAVRDG  84

Query  109  TDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRP-SLAVNQPGIYPVLVNVNGTPDY  167
            +       +F ++   +  GQ   F L  P    T P SL V  PG+YP+LVNVNG P  
Sbjct  85   SRTVA-EQNFTSITGSIAPGQRVPFELRIPF---TGPNSLQVTSPGVYPLLVNVNGRPAG  140

Query  168  GAPARLDNARFLLPVVGVPPDQATDFGSAVAPETTAPVWITMLWPLADRPRLAPGAPGGT  227
            GA AR+D A FLL               A       P   TML P+ D PRLA G   G+
Sbjct  141  GARARIDEAHFLL--------PVLAAPGAAPAAPPKPAPTTMLVPIVDYPRLARGPVPGS  192

Query  228  VPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPDGAVGRALCLAIDPDLLITVNAM  287
             PV L+DD L+ SLA GGRL  L+ A          P   +G ALC AIDPDLL TV AM
Sbjct  193  RPV-LMDDLLSESLAPGGRLYELVRA----VGETAGPGSRLGNALCFAIDPDLLATVRAM  247

Query  288  TGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLRTLVHRTCVTPLPFAQADLDALQ  347
              GY+V     G  +        G G   A  WL +L+      CV PLP++  D+ AL 
Sbjct  248  QTGYLVRQPSGGTVE--------GIGAGTARLWLSKLKEATAGRCVIPLPYSDVDVVALG  299

Query  348  RVNDPRLSAIATISPADIVDRILDVSSTRGATVLPDGPLTGRAINLLSTHGNTVAVAAAD  407
            R   P           D++   LD SS +   V     +  R   L    G     AA  
Sbjct  300  RAGLP-----------DVIRGALDTSSRQ--LVQETLGVEPRKDVLWPVEGTIDEPAAGQ  346

Query  408  FSPEEQQGSSQIGSALLPATAPRRLSPRVVAAPFDPAV-GAALAAAGTNPTVPTYLDP--  464
             + +   G         P      L P  ++ P    V G+ LAA   +P V + LDP  
Sbjct  347  VAAQAPDG---------PGITTALLRPEAISGPTPARVRGSGLAALSIDPLVASALDPLR  397

Query  465  -------SLFVRIAHESITARRQDALGAMLWRSLEPNAAPRTQILVPPASWSLASDDAQV  517
                    L  +     + A  Q+ALGA+ +R+   +A   + ++ PP  W+++  D + 
Sbjct  398  DTTRETTELSPQTGDGVVAA--QNALGALAFRANTASAPGGSVLVAPPRRWNVSGGDVRA  455

Query  518  ILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGAYSAARGRFNDDITTQIGGQVAR  577
            +LT +     +G+  P  LP   A      +   P     AA       +  ++  Q  R
Sbjct  456  LLTGMEQLAAAGVVQPTSLPEPDASKLPEVDLSYP---VDAAGREIPRRVLNELAAQNYR  512

Query  578  LWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQSL--PPDTRNGLAQQRLAVVGKTID  635
            +  L  A   +    +     T P+R  +LR  S +    PD     A+  +    + +D
Sbjct  513  VGDLFRAADREPAVNVQEADVTNPMRNALLRGASSAWRGNPDA----ARYWVNAGRRALD  568

Query  636  DLFGAVTIVNPGGSYTLATEH-SPLPLALHNGLAVPIRVRLQVDAPPGMTVADVGQIELP  694
              F  V +  P G  TL  E  + +PL + N L V + V  ++   PG+   D+G + +P
Sbjct  569  LEFSRVRLEEPNGKLTLGGESDNYIPLTVANDLPVTVSVVFRIPRTPGLETKDLGVLRIP  628

Query  695  -PGYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPVRLSVHSNAYGKVLFAITLSAAAV  753
              G     +P  V+ + +  +D+SL TP G  LG P RL + S AYG V+  +T+ AA++
Sbjct  629  AQGRRSFFLPTTVHRSGQFTLDISLATPSGTELGPPKRLRLESGAYGPVILVLTIIAASL  688

Query  754  LVTLA  758
            L+ L+
Sbjct  689  LIVLS  693


>gi|302531339|ref|ZP_07283681.1| predicted protein [Streptomyces sp. AA4]
 gi|302440234|gb|EFL12050.1| predicted protein [Streptomyces sp. AA4]
Length=721

 Score =  232 bits (592),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 239/757 (32%), Positives = 359/757 (48%), Gaps = 85/757 (11%)

Query  31   PSAAPHALAGEPSPTPFVQVRID--QVTPDVVTTSSEPHVTVSGTVTNTGDRPVRDVMVR  88
            P+ A    +GEP+     ++R+D  Q +P +V TSS+  +TV+GTVTNTG R +   M R
Sbjct  23   PAGAQENSSGEPA-----RLRLDLGQFSPRLV-TSSDQAITVTGTVTNTGSRRIVKPMAR  76

Query  89   LEHAAAVTSSTALRTSLDGGTDQYQPAADFLTVAPELDRGQEAGFTLSAPLRSLTRPSLA  148
            L+    + S  A+ + L G   Q  P  DF+++APEL+ GQ A   ++ P   LT P  A
Sbjct  77   LQIGERLASPRAMDSVLAGNPVQDSPLTDFVSLAPELEPGQSARLDITVP---LTGPRGA  133

Query  149  VNQPGIYPVLVNVNGTPDYGAPARLDNARFLLPVVGVP---PDQATDFGSAVAPETTAPV  205
              +PG+YP+LVNVNGTP+YG PARL     LLPV+  P    +QAT   S VA       
Sbjct  134  ALRPGVYPLLVNVNGTPEYGGPARLAAVSLLLPVLSTPGHANNQATQRHSKVA-------  186

Query  206  WITMLWPLADRPRLAPGAPGGTVPVRLVDDDLANSLANGGRLDILLSAAEFATNREVDPD  265
               +LWP+ D       AP G VP+ L DD LA+ L+ GGRL  L+SAA  A       +
Sbjct  187  ---VLWPITDSTPHIQSAPFG-VPMTLTDDSLADELSPGGRLYSLVSAARAAQEN----N  238

Query  266  GAVGRALCLAIDPDLLITVNAMTGGYVVSDSPDGAAQLPGTPTHPGTGQAAASSWLDRLR  325
              +G +LC A+DPDLL TV+AM  GY VS    G A         G G  AAS+WL  LR
Sbjct  239  QKIGSSLCFALDPDLLRTVDAMRNGYRVS---GGVA---------GKGADAASNWLAALR  286

Query  326  TLVHRTCVTPLPFAQADLDALQRV----NDPRLSAIAT-ISPADIVDRILDVSSTRGATV  380
             LV   CV PLPFA ADL  L ++     +P    + T ++    +  +L V S  G  +
Sbjct  287  ALVTGRCVIPLPFADADLTTLGKIRGADGNPDAGLLTTALNGTATIREVLGVESKSG-VL  345

Query  381  LPDGPLTGRAINLLSTHGNTVAVAAADFSPEEQQGSSQIGSALLPATAPRRLSPRVVAAP  440
             P G    +A++ +S+ G    +           G  + G      T    LS  + A P
Sbjct  346  WPGGTPDEKALSAISSGGYQTVLT--------DSGKLRAGGDDETVTGAATLSDGLRAQP  397

Query  441  FDPAVGAALAAAGTNPTVPTYLDPSLFVRIAHESITARRQDALGAM-----LWRSLEPNA  495
             +     ++A AG    +P+   P+ +   +  +++   Q+ L A+     L R+    +
Sbjct  398  TN-----SMATAGLTGFLPSPQTPTTYSGASQRAVST--QNGLAAIAFEAGLGRTEGATS  450

Query  496  APRTQILVPPASWSLASDDAQVILTALATAIRSGLAVPRPLPAVIADAAARTEPPEPPGA  555
             P   ++ PP  W   +D+    L+ L     +G+     L  ++        PP+  G+
Sbjct  451  GP--LLVAPPRRWDATTDELNAFLSGLGKLTAAGVTAGSTLDDLLG------SPPD--GS  500

Query  556  YSAARGRFNDD---ITTQIGGQVARLWKLTSALTIDDRTGLTGVQYTAPLREDMLRALSQ  612
             S   G  +D    +  Q+ G       L SA+ +D R  +       P+R+ ++R  S 
Sbjct  501  ASLVAGPRSDGGAAVADQLSGLDQDAASLMSAMQVDQRNRVEPKAIVGPVRDALVRGSST  560

Query  613  SLPPDTRNGLAQQRLAVVGKTIDDLFGAVTIVNPGGSYTLATEHSPLPLALHNGLAVPIR  672
            +  P   +G+     A     +  +   VT+  P  +  LA+  SPLP+ +HN L V + 
Sbjct  561  AFGP---SGVPSSASANATAELAAIRDQVTVEQPKQTIALASGSSPLPVYVHNDLPVGVS  617

Query  673  VRLQVDAPPGMTVADVGQIELPP--GYLPLRVPIEVNFTQRVAVDVSLRTPDGVALGEPV  730
             ++ +    G+      +  L P  G     V IE      ++VDVSL TP G  LG   
Sbjct  618  AQIALKNNMGVRPEQAAKNWLFPAKGGQTKYVQIEALRAGHLSVDVSLTTPSGTDLGATA  677

Query  731  RLSVHSNAYGKVLFAITLSAAAVLVTLAGRRLWHRFR  767
            R  + S  YG +   +T++A   L+ LA RR++ R +
Sbjct  678  RFELTSTEYGPITIIVTVAAGCALLLLASRRIYRRIK  714



Lambda     K      H
   0.317    0.133    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1939692271896


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40