BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3914 Length=116 Score E Sequences producing significant alignments: (Bits) Value gi|15611050|ref|NP_218431.1| thioredoxin trxC (TRX) (MPT46) [Myc... 233 6e-60 gi|122920507|pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thio... 233 1e-59 gi|311772203|pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thio... 230 5e-59 gi|289567870|ref|ZP_06448097.1| LOW QUALITY PROTEIN: thioredoxin... 229 9e-59 gi|118620069|ref|YP_908401.1| thioredoxin TrxC [Mycobacterium ul... 210 6e-53 gi|183985448|ref|YP_001853739.1| thioredoxin TrxC [Mycobacterium... 209 1e-52 gi|41410438|ref|NP_963274.1| TrxC [Mycobacterium avium subsp. pa... 209 1e-52 gi|118465727|ref|YP_884412.1| thioredoxin [Mycobacterium avium 1... 207 3e-52 gi|240168394|ref|ZP_04747053.1| thioredoxin TrxC [Mycobacterium ... 206 6e-52 gi|342862342|ref|ZP_08718983.1| thioredoxin TrxC [Mycobacterium ... 206 8e-52 gi|296167153|ref|ZP_06849560.1| thioredoxin [Mycobacterium paras... 203 8e-51 gi|15828461|ref|NP_302724.1| bifunctional thioredoxin reductase/... 201 3e-50 gi|333992978|ref|YP_004525592.1| thioredoxin TrxC [Mycobacterium... 185 2e-45 gi|118473002|ref|YP_891128.1| thioredoxin [Mycobacterium smegmat... 184 4e-45 gi|145221432|ref|YP_001132110.1| thioredoxin [Mycobacterium gilv... 182 2e-44 gi|120406997|ref|YP_956826.1| thioredoxin [Mycobacterium vanbaal... 179 9e-44 gi|108802362|ref|YP_642559.1| thioredoxin [Mycobacterium sp. MCS... 179 1e-43 gi|3122936|sp|O30974.1|THIO_MYCSM RecName: Full=Thioredoxin; Sho... 179 1e-43 gi|54027637|ref|YP_121879.1| putative thioredoxin [Nocardia farc... 166 7e-40 gi|226309506|ref|YP_002769468.1| thioredoxin [Rhodococcus erythr... 166 8e-40 gi|111020640|ref|YP_703612.1| thioredoxin [Rhodococcus jostii RH... 165 2e-39 gi|169632014|ref|YP_001705663.1| thioredoxin [Mycobacterium absc... 165 2e-39 gi|226362883|ref|YP_002780663.1| thioredoxin [Rhodococcus opacus... 165 2e-39 gi|333922227|ref|YP_004495808.1| thioredoxin [Amycolicicoccus su... 165 2e-39 gi|302531345|ref|ZP_07283687.1| thioredoxin [Streptomyces sp. AA... 160 5e-38 gi|312142017|ref|YP_004009353.1| thioredoxin [Rhodococcus equi 1... 159 1e-37 gi|317509440|ref|ZP_07967058.1| thioredoxin [Segniliparus rugosu... 159 2e-37 gi|300791153|ref|YP_003771444.1| thioredoxin [Amycolatopsis medi... 159 2e-37 gi|257057904|ref|YP_003135736.1| thioredoxin [Saccharomonospora ... 158 3e-37 gi|325677535|ref|ZP_08157199.1| thioredoxin [Rhodococcus equi AT... 157 4e-37 gi|262204652|ref|YP_003275860.1| thioredoxin [Gordonia bronchial... 157 7e-37 gi|326383898|ref|ZP_08205582.1| thioredoxin [Gordonia neofelifae... 156 1e-36 gi|256381063|ref|YP_003104723.1| thioredoxin [Actinosynnema miru... 154 3e-36 gi|343928724|ref|ZP_08768169.1| thioredoxin [Gordonia alkanivora... 154 4e-36 gi|296392455|ref|YP_003657339.1| thioredoxin [Segniliparus rotun... 154 5e-36 gi|258655498|ref|YP_003204654.1| thioredoxin [Nakamurella multip... 154 6e-36 gi|331700381|ref|YP_004336620.1| thioredoxin [Pseudonocardia dio... 153 1e-35 gi|284993428|ref|YP_003411983.1| thioredoxin [Geodermatophilus o... 151 4e-35 gi|325003244|ref|ZP_08124356.1| thioredoxin [Pseudonocardia sp. P1] 150 6e-35 gi|134103805|ref|YP_001109466.1| thioredoxin reductase [Saccharo... 143 1e-32 gi|296141897|ref|YP_003649140.1| thioredoxin [Tsukamurella pauro... 142 2e-32 gi|86743212|ref|YP_483612.1| thioredoxin [Frankia sp. CcI3] >gi|... 142 2e-32 gi|271970542|ref|YP_003344738.1| thioredoxin [Streptosporangium ... 140 7e-32 gi|158319046|ref|YP_001511554.1| thioredoxin [Frankia sp. EAN1pe... 140 8e-32 gi|311897297|dbj|BAJ29705.1| putative thioredoxin [Kitasatospora... 138 3e-31 gi|159040578|ref|YP_001539831.1| thioredoxin [Salinispora arenic... 138 3e-31 gi|111226206|ref|YP_717000.1| thioredoxin 1, redox factor [Frank... 137 5e-31 gi|288921195|ref|ZP_06415481.1| thioredoxin [Frankia sp. EUN1f] ... 136 9e-31 gi|254777651|ref|ZP_05219167.1| TrxC [Mycobacterium avium subsp.... 135 2e-30 gi|302870717|ref|YP_003839354.1| thioredoxin [Micromonospora aur... 135 2e-30 >gi|15611050|ref|NP_218431.1| thioredoxin trxC (TRX) (MPT46) [Mycobacterium tuberculosis H37Rv] gi|15843547|ref|NP_338584.1| thioredoxin [Mycobacterium tuberculosis CDC1551] gi|31795087|ref|NP_857580.1| thioredoxin trxC (TRX) (MPT46) [Mycobacterium bovis AF2122/97] 81 more sequence titles Length=116 Score = 233 bits (595), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV Sbjct 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN Sbjct 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 >gi|122920507|pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C Length=121 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV Sbjct 6 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 65 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN Sbjct 66 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 121 >gi|311772203|pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant gi|311772204|pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant gi|311772217|pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In Complex With Quinol Inhibitor Pmx464 gi|311772218|pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In Complex With Quinol Inhibitor Pmx464 gi|311772219|pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In Complex With Quinol Inhibitor Pmx464 gi|311772220|pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In Complex With Quinol Inhibitor Pmx464 Length=118 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 115/116 (99%), Positives = 115/116 (99%), Gaps = 0/116 (0%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGP KMVAPVLEEIATERATDLTV Sbjct 3 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTV 62 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN Sbjct 63 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 118 >gi|289567870|ref|ZP_06448097.1| LOW QUALITY PROTEIN: thioredoxin trxC [Mycobacterium tuberculosis T17] gi|289541623|gb|EFD45272.1| LOW QUALITY PROTEIN: thioredoxin trxC [Mycobacterium tuberculosis T17] Length=114 Score = 229 bits (584), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 114/114 (100%), Positives = 114/114 (100%), Gaps = 0/114 (0%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV Sbjct 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN 114 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN Sbjct 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN 114 >gi|118620069|ref|YP_908401.1| thioredoxin TrxC [Mycobacterium ulcerans Agy99] gi|118572179|gb|ABL06930.1| thioredoxin TrxC [Mycobacterium ulcerans Agy99] Length=117 Score = 210 bits (535), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 104/117 (89%), Positives = 111/117 (95%), Gaps = 1/117 (0%) Query 1 MTDSEKS-ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 M DSEKS ATI+V+DASF+T+VLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERA +LT Sbjct 1 MIDSEKSSATIEVSDASFSTEVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERADNLT 60 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVD NPETARNFQVVSIPT+ILFKDG+PVKRIVGAKGKAALLRELSD VPNL Sbjct 61 VAKLDVDANPETARNFQVVSIPTMILFKDGEPVKRIVGAKGKAALLRELSDAVPNLG 117 >gi|183985448|ref|YP_001853739.1| thioredoxin TrxC [Mycobacterium marinum M] gi|183178774|gb|ACC43884.1| thioredoxin TrxC [Mycobacterium marinum M] Length=117 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 104/117 (89%), Positives = 110/117 (95%), Gaps = 1/117 (0%) Query 1 MTDSEKS-ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 MTD EKS ATI+V+DASF+T+VLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERA LT Sbjct 1 MTDPEKSSATIEVSDASFSTEVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERADSLT 60 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVD NPETARNFQVVSIPT+ILFKDG+PVKRIVGAKGKAALLRELSD VPNL Sbjct 61 VAKLDVDANPETARNFQVVSIPTMILFKDGEPVKRIVGAKGKAALLRELSDAVPNLG 117 >gi|41410438|ref|NP_963274.1| TrxC [Mycobacterium avium subsp. paratuberculosis K-10] gi|15808974|gb|AAL08576.1|AF418548_2 thioredoxin [Mycobacterium avium subsp. paratuberculosis] gi|41399272|gb|AAS06890.1| TrxC [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459805|gb|EGO38719.1| thioredoxin [Mycobacterium avium subsp. paratuberculosis S397] Length=117 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 103/117 (89%), Positives = 110/117 (95%), Gaps = 1/117 (0%) Query 1 MTDSEK-SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 MTD+EK SATI+V+DASF+TDVL+SNKPVLVDFWATWCGPCKMVAPVLEEIA+ER LT Sbjct 1 MTDAEKASATIEVSDASFSTDVLASNKPVLVDFWATWCGPCKMVAPVLEEIASERGDHLT 60 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVD NPETA+NFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSD VPNL Sbjct 61 VAKLDVDANPETAQNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDAVPNLG 117 >gi|118465727|ref|YP_884412.1| thioredoxin [Mycobacterium avium 104] gi|118167014|gb|ABK67911.1| thioredoxin [Mycobacterium avium 104] Length=117 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 102/117 (88%), Positives = 110/117 (95%), Gaps = 1/117 (0%) Query 1 MTDSEKS-ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 MTD+EK+ ATI+V+DASF+TDVL+SNKPVLVDFWATWCGPCKMVAPVLEEIA+ER LT Sbjct 1 MTDAEKAIATIEVSDASFSTDVLASNKPVLVDFWATWCGPCKMVAPVLEEIASERGDHLT 60 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVD NPETA+NFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSD VPNL Sbjct 61 VAKLDVDANPETAQNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDAVPNLG 117 >gi|240168394|ref|ZP_04747053.1| thioredoxin TrxC [Mycobacterium kansasii ATCC 12478] Length=117 Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 101/117 (87%), Positives = 111/117 (95%), Gaps = 1/117 (0%) Query 1 MTDSEKS-ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 MTDSEKS ATI+V+DASF+T VLSSNKPVLVDFWATWCGPCKMVAPVLEEIA ER+ LT Sbjct 1 MTDSEKSGATIEVSDASFSTTVLSSNKPVLVDFWATWCGPCKMVAPVLEEIAAERSGSLT 60 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVD NP+TAR+FQV+SIPT+ILFKDGQPVKRIVGAKGKAALLRE+SDVVPNL+ Sbjct 61 VAKLDVDANPQTARDFQVISIPTMILFKDGQPVKRIVGAKGKAALLREISDVVPNLS 117 >gi|342862342|ref|ZP_08718983.1| thioredoxin TrxC [Mycobacterium colombiense CECT 3035] gi|342130199|gb|EGT83527.1| thioredoxin TrxC [Mycobacterium colombiense CECT 3035] Length=117 Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/117 (87%), Positives = 110/117 (95%), Gaps = 1/117 (0%) Query 1 MTDSEKS-ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 MTD+EK+ ATI+V+DASF+TDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIA+ER LT Sbjct 1 MTDAEKAGATIEVSDASFSTDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASERGEHLT 60 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVD NPETA+NFQVVSIPTLILFKDGQPVKRIVGAKGKA+LLRELSD VP+L Sbjct 61 VAKLDVDANPETAQNFQVVSIPTLILFKDGQPVKRIVGAKGKASLLRELSDAVPDLG 117 >gi|296167153|ref|ZP_06849560.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897475|gb|EFG77074.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length=117 Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 100/117 (86%), Positives = 109/117 (94%), Gaps = 1/117 (0%) Query 1 MTDSEKS-ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 MTD+EK+ ATI+V+DASF+ +VLSSNKPVLVDFWATWCGPCKMVAPVLEEIA+ERA LT Sbjct 1 MTDAEKAGATIEVSDASFSNEVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASERAGQLT 60 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVD NP TAR+FQVVSIPT+ILFKDGQPVKRIVGAKGKAALLRELSD VPNL Sbjct 61 VAKLDVDANPVTARDFQVVSIPTMILFKDGQPVKRIVGAKGKAALLRELSDAVPNLG 117 >gi|15828461|ref|NP_302724.1| bifunctional thioredoxin reductase/thioredoxin [Mycobacterium leprae TN] gi|221230938|ref|YP_002504354.1| bifunctional thioredoxin reductase/thioredoxin [Mycobacterium leprae Br4923] gi|1174807|sp|P46843.1|TRXB_MYCLE RecName: Full=Bifunctional thioredoxin reductase/thioredoxin; Includes: RecName: Full=Thioredoxin reductase; Short=TRXR; Includes: RecName: Full=Thioredoxin gi|871419|emb|CAA61150.1| thioredoxin /thioredoxin reductase hybrid protein [Mycobacterium leprae] gi|886315|gb|AAB53131.1| thioredoxin reductase/thioredoxin [Mycobacterium leprae] gi|13093891|emb|CAC32235.1| bifunctional thioredoxin reductase/thioredoxin [Mycobacterium leprae] gi|219934045|emb|CAR72803.1| bifunctional thioredoxin reductase/thioredoxin [Mycobacterium leprae Br4923] Length=458 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 97/117 (83%), Positives = 106/117 (91%), Gaps = 1/117 (0%) Query 1 MTDSEKSA-TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLT 59 MTD++ + TI+VTDASF DVLSSNKPVLVDFWATWCGPCKMVAPVLEEIA+E+ LT Sbjct 342 MTDAKNAGVTIEVTDASFFADVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLT 401 Query 60 VAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN 116 VAKLDVDTNPE AR FQVVSIPT+ILF+ GQPVKRIVGAKGKAALLR+LSDVVPNLN Sbjct 402 VAKLDVDTNPEMAREFQVVSIPTMILFQGGQPVKRIVGAKGKAALLRDLSDVVPNLN 458 >gi|333992978|ref|YP_004525592.1| thioredoxin TrxC [Mycobacterium sp. JDM601] gi|333488946|gb|AEF38338.1| thioredoxin TrxC [Mycobacterium sp. JDM601] Length=110 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 91/111 (82%), Positives = 99/111 (90%), Gaps = 2/111 (1%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 MTD+ T+ V+DA+FATDVL+S KPVLVDFWATWCGPCKMVAPVLEEIA E+A LTV Sbjct 1 MTDNHN--TVTVSDATFATDVLASGKPVLVDFWATWCGPCKMVAPVLEEIAAEQADQLTV 58 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDV 111 AKLDVD NPETAR F VVSIPTLILFKDGQPVKRIVGAKGKAALLREL+D+ Sbjct 59 AKLDVDANPETAREFSVVSIPTLILFKDGQPVKRIVGAKGKAALLRELADI 109 >gi|118473002|ref|YP_891128.1| thioredoxin [Mycobacterium smegmatis str. MC2 155] gi|118174289|gb|ABK75185.1| thioredoxin [Mycobacterium smegmatis str. MC2 155] Length=110 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 89/109 (82%), Positives = 97/109 (89%), Gaps = 0/109 (0%) Query 4 SEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKL 63 SE SAT+ VTD SF+TDVL S+KPVLVDFWATWCGPCKMVAPVLEEIA E+ LTVAK+ Sbjct 2 SEDSATVAVTDDSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKI 61 Query 64 DVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 DVD NP TAR+FQVVSIPT+ILFKDG PVKRIVGAKGKAALLRELSD + Sbjct 62 DVDANPATARDFQVVSIPTMILFKDGAPVKRIVGAKGKAALLRELSDAL 110 >gi|145221432|ref|YP_001132110.1| thioredoxin [Mycobacterium gilvum PYR-GCK] gi|315446816|ref|YP_004079695.1| thioredoxin [Mycobacterium sp. Spyr1] gi|145213918|gb|ABP43322.1| thioredoxin [Mycobacterium gilvum PYR-GCK] gi|315265119|gb|ADU01861.1| thioredoxin [Mycobacterium sp. Spyr1] Length=109 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 88/106 (84%), Positives = 97/106 (92%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 S+T+ VTD SF+ DVLSS PVLVDFWATWCGPCKMVAPVLEEIA+E+A LTVAKLDVD Sbjct 4 SSTVTVTDDSFSDDVLSSGTPVLVDFWATWCGPCKMVAPVLEEIASEKAGSLTVAKLDVD 63 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP TAR+FQVVSIPT+ILFKDGQPVKRIVGAKGKAALLRE++DVV Sbjct 64 ENPATARDFQVVSIPTMILFKDGQPVKRIVGAKGKAALLREIADVV 109 >gi|120406997|ref|YP_956826.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] gi|119959815|gb|ABM16820.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] Length=110 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 89/112 (80%), Positives = 100/112 (90%), Gaps = 2/112 (1%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 M+DS+ T+ VTD SF+ DVLSS PVLVDFWATWCGPCKMVAPVLEEIA+E+A LTV Sbjct 1 MSDSKN--TVTVTDDSFSDDVLSSGTPVLVDFWATWCGPCKMVAPVLEEIASEKAGSLTV 58 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 AK+DVD NP TAR+FQVVSIPT+ILFKDG+PVKRIVGAKGKAALLRELS+VV Sbjct 59 AKIDVDENPATARDFQVVSIPTMILFKDGKPVKRIVGAKGKAALLRELSEVV 110 >gi|108802362|ref|YP_642559.1| thioredoxin [Mycobacterium sp. MCS] gi|119871515|ref|YP_941467.1| thioredoxin [Mycobacterium sp. KMS] gi|126438342|ref|YP_001074033.1| thioredoxin [Mycobacterium sp. JLS] gi|108772781|gb|ABG11503.1| thioredoxin [Mycobacterium sp. MCS] gi|119697604|gb|ABL94677.1| thioredoxin [Mycobacterium sp. KMS] gi|126238142|gb|ABO01543.1| thioredoxin [Mycobacterium sp. JLS] Length=109 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 86/106 (82%), Positives = 98/106 (93%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 SAT+ VTD SF+ DVL+S+ PVLVDFWATWCGPCKMVAPVLEEIA+E+A LTVAKLDVD Sbjct 4 SATVTVTDDSFSEDVLTSSTPVLVDFWATWCGPCKMVAPVLEEIASEKAGALTVAKLDVD 63 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP TAR+FQVVSIPT+ILFKDG+PVKRIVGAKGKAALLREL+D++ Sbjct 64 ANPTTARDFQVVSIPTMILFKDGEPVKRIVGAKGKAALLRELTDLL 109 >gi|3122936|sp|O30974.1|THIO_MYCSM RecName: Full=Thioredoxin; Short=Trx gi|2511765|gb|AAB80940.1| thioredoxin [Mycobacterium smegmatis] Length=112 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 89/111 (81%), Positives = 97/111 (88%), Gaps = 2/111 (1%) Query 4 SEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKL 63 SE SAT+ VTD SF+TDVL S+KPVLVDFWATWCGPCKMVAPVLEEIA E+ LTVAK+ Sbjct 2 SEDSATVAVTDDSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKI 61 Query 64 --DVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 DVD NP TAR+FQVVSIPT+ILFKDG PVKRIVGAKGKAALLRELSD + Sbjct 62 DVDVDANPATARDFQVVSIPTMILFKDGAPVKRIVGAKGKAALLRELSDAL 112 >gi|54027637|ref|YP_121879.1| putative thioredoxin [Nocardia farcinica IFM 10152] gi|54019145|dbj|BAD60515.1| putative thioredoxin [Nocardia farcinica IFM 10152] Length=110 Score = 166 bits (421), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 79/109 (73%), Positives = 91/109 (84%), Gaps = 0/109 (0%) Query 4 SEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKL 63 SE T+ VTDASFA DVL S KPVLVDFWA WCGPCKMVAPVLEEIA A LTVAKL Sbjct 2 SENGKTVTVTDASFADDVLMSEKPVLVDFWADWCGPCKMVAPVLEEIAGTHADKLTVAKL 61 Query 64 DVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 DVD NP TAR++Q++S+PT++LF+ G+PVK+IVGAKGKAALLREL V+ Sbjct 62 DVDANPATARDYQILSLPTMMLFRGGKPVKQIVGAKGKAALLRELDGVI 110 >gi|226309506|ref|YP_002769468.1| thioredoxin [Rhodococcus erythropolis PR4] gi|229491192|ref|ZP_04385020.1| thioredoxin [Rhodococcus erythropolis SK121] gi|226188625|dbj|BAH36729.1| thioredoxin [Rhodococcus erythropolis PR4] gi|229321930|gb|EEN87723.1| thioredoxin [Rhodococcus erythropolis SK121] Length=107 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 78/106 (74%), Positives = 92/106 (87%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 S T+ +TD SF DVL S+KPVLVDFWATWCGPCKMVAPVLEEIA E + LTVAKLD+D Sbjct 2 SNTVTITDDSFKQDVLGSDKPVLVDFWATWCGPCKMVAPVLEEIAGENSEKLTVAKLDID 61 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP AR+FQV+SIPT+ILFKDG+P+K IVGAKGKAALL++L+DV+ Sbjct 62 ANPAAARDFQVMSIPTMILFKDGKPIKTIVGAKGKAALLKDLADVL 107 >gi|111020640|ref|YP_703612.1| thioredoxin [Rhodococcus jostii RHA1] gi|110820170|gb|ABG95454.1| thioredoxin [Rhodococcus jostii RHA1] Length=107 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 76/106 (72%), Positives = 91/106 (86%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 S T+ +TD SF DV+SS+KPVLVDFWATWCGPCKM+APVLEEIA E + LT+AKLD+D Sbjct 2 SNTVTITDDSFQQDVISSDKPVLVDFWATWCGPCKMIAPVLEEIAGEHSEKLTIAKLDID 61 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP AR+FQV+SIPTLILFKDG+P+ IVG KGKAALL+EL+DV+ Sbjct 62 ANPGAARDFQVMSIPTLILFKDGKPINTIVGTKGKAALLKELADVL 107 >gi|169632014|ref|YP_001705663.1| thioredoxin [Mycobacterium abscessus ATCC 19977] gi|169243981|emb|CAM65009.1| Thioredoxin (Trx) [Mycobacterium abscessus] Length=109 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 80/106 (76%), Positives = 88/106 (84%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 AT+ VTD SF DV+SSNKPVLVDFWATWCGPCKMVAPVLEEIA + LT+AKLDVD Sbjct 4 HATVTVTDDSFQEDVVSSNKPVLVDFWATWCGPCKMVAPVLEEIAKDHGEALTIAKLDVD 63 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NPETAR FQV SIPTLILF++G+ KRIVGAK K+ALLREL VV Sbjct 64 ANPETARAFQVTSIPTLILFQNGEATKRIVGAKSKSALLRELDGVV 109 >gi|226362883|ref|YP_002780663.1| thioredoxin [Rhodococcus opacus B4] gi|226241370|dbj|BAH51718.1| thioredoxin [Rhodococcus opacus B4] Length=107 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 76/106 (72%), Positives = 91/106 (86%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 S T+ +TD SF DV+SS+KPVLVDFWATWCGPCKM+APVLEEIA E + LT+AKLD+D Sbjct 2 SNTVTITDDSFQQDVISSDKPVLVDFWATWCGPCKMIAPVLEEIAGEHSDKLTIAKLDID 61 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP AR+FQV+SIPTLILFKDG+P+ IVG KGKAALL+EL+DV+ Sbjct 62 ANPGAARDFQVMSIPTLILFKDGKPINTIVGTKGKAALLKELADVL 107 >gi|333922227|ref|YP_004495808.1| thioredoxin [Amycolicicoccus subflavus DQS3-9A1] gi|333484448|gb|AEF43008.1| Thioredoxin [Amycolicicoccus subflavus DQS3-9A1] Length=106 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 74/105 (71%), Positives = 93/105 (89%), Gaps = 0/105 (0%) Query 8 ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT 67 +TI VTD++FA+DVL S KPVLVDFWATWCGPC+MVAPVLEEI+ E+A LT+AKLD+D Sbjct 2 STINVTDSTFASDVLQSEKPVLVDFWATWCGPCRMVAPVLEEISNEKAETLTIAKLDIDA 61 Query 68 NPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP R+FQ++SIPT+ILFKDG+PVK+IVGAK KAALL+E+ D++ Sbjct 62 NPGVPRDFQILSIPTMILFKDGEPVKQIVGAKSKAALLKEIEDLL 106 >gi|302531345|ref|ZP_07283687.1| thioredoxin [Streptomyces sp. AA4] gi|302440240|gb|EFL12056.1| thioredoxin [Streptomyces sp. AA4] Length=107 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 77/106 (73%), Positives = 90/106 (85%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 S +KVTD SF DVL+S KPVLVDFWATWCGPCKMVAPVLEEIA E +TVAKLD+D Sbjct 2 SEPVKVTDKSFVDDVLTSEKPVLVDFWATWCGPCKMVAPVLEEIAKENGDKITVAKLDID 61 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP TAR++QV+SIPTLILF+ G+PVK+IVGAK KAALL +L+DV+ Sbjct 62 ENPNTARDYQVMSIPTLILFQGGKPVKQIVGAKPKAALLSDLADVL 107 >gi|312142017|ref|YP_004009353.1| thioredoxin [Rhodococcus equi 103S] gi|311891356|emb|CBH50677.1| thioredoxin [Rhodococcus equi 103S] Length=107 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 74/104 (72%), Positives = 87/104 (84%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 TI + D SF DVL + KPVLVDFWATWCGPCKMVAPVLEEIA E LT+AKLD+D N Sbjct 4 TITINDDSFKQDVLDAEKPVLVDFWATWCGPCKMVAPVLEEIAGEHGDKLTIAKLDIDQN 63 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P AR+FQV+SIPT+ILF+ G+PVK IVGAKGKAALL++L+DV+ Sbjct 64 PGAARDFQVMSIPTMILFQGGKPVKTIVGAKGKAALLKDLADVL 107 >gi|317509440|ref|ZP_07967058.1| thioredoxin [Segniliparus rugosus ATCC BAA-974] gi|316252269|gb|EFV11721.1| thioredoxin [Segniliparus rugosus ATCC BAA-974] Length=109 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 76/109 (70%), Positives = 93/109 (86%), Gaps = 1/109 (0%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 M DSE S+T+ VTD+SFA DVL+S +PVLVDFWA+WCGPC+MVAPVLEEIA E+A L V Sbjct 1 MADSE-SSTLTVTDSSFAQDVLASEQPVLVDFWASWCGPCRMVAPVLEEIAKEQAGKLVV 59 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELS 109 AKLDVD NP+T+ +++ SIP LILFK+G+PVK+IVGAK KAA+LREL Sbjct 60 AKLDVDANPKTSTKYEIGSIPNLILFKNGEPVKQIVGAKPKAAILRELG 108 >gi|300791153|ref|YP_003771444.1| thioredoxin [Amycolatopsis mediterranei U32] gi|299800667|gb|ADJ51042.1| thioredoxin [Amycolatopsis mediterranei U32] gi|340532853|gb|AEK48058.1| thioredoxin [Amycolatopsis mediterranei S699] Length=107 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 74/104 (72%), Positives = 90/104 (87%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 T+KVTDA+F +VL+S KPVLVDFWATWCGPCKMVAPVLEEIA E LT+AK+D+D N Sbjct 4 TVKVTDATFVDEVLTSEKPVLVDFWATWCGPCKMVAPVLEEIAAENGEKLTIAKIDIDEN 63 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P T R++QV+SIPTLILF+ G+PVK+IVGAK KAALL +L+DV+ Sbjct 64 PNTPRDYQVMSIPTLILFQGGKPVKQIVGAKPKAALLSDLADVL 107 >gi|257057904|ref|YP_003135736.1| thioredoxin [Saccharomonospora viridis DSM 43017] gi|256587776|gb|ACU98909.1| thioredoxin [Saccharomonospora viridis DSM 43017] Length=108 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 72/104 (70%), Positives = 90/104 (87%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 T++VTD++FA +VL+ +KPVLVDFWATWCGPCKM+APVLEEIA E L VAKLD D N Sbjct 4 TVEVTDSNFADEVLAHDKPVLVDFWATWCGPCKMIAPVLEEIAAEHGDKLRVAKLDTDAN 63 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P T R++QV+SIPT+ILF+DG+PVK+IVGAK KAALL +L+DV+ Sbjct 64 PNTTRDYQVMSIPTMILFQDGKPVKQIVGAKPKAALLNDLADVL 107 >gi|325677535|ref|ZP_08157199.1| thioredoxin [Rhodococcus equi ATCC 33707] gi|325551782|gb|EGD21480.1| thioredoxin [Rhodococcus equi ATCC 33707] Length=107 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 73/104 (71%), Positives = 87/104 (84%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 TI + D SF +VL + KPVLVDFWATWCGPCKMVAPVLEEIA E LT+AKLD+D N Sbjct 4 TITINDDSFKQEVLDAEKPVLVDFWATWCGPCKMVAPVLEEIAGEHGDKLTIAKLDIDQN 63 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P AR+FQV+SIPT+ILF+ G+PVK IVGAKGKAALL++L+DV+ Sbjct 64 PGAARDFQVMSIPTMILFQGGKPVKTIVGAKGKAALLKDLADVL 107 >gi|262204652|ref|YP_003275860.1| thioredoxin [Gordonia bronchialis DSM 43247] gi|262087999|gb|ACY23967.1| thioredoxin [Gordonia bronchialis DSM 43247] Length=112 Score = 157 bits (396), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 74/104 (72%), Positives = 87/104 (84%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 T+ V D +F VL S+KPVLVDFWATWCGPC+MVAPVLEEIA + A LT+AKLDVD + Sbjct 5 TVAVNDTTFKDTVLGSDKPVLVDFWATWCGPCRMVAPVLEEIAGDHADKLTIAKLDVDES 64 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P TAR+FQ++SIPT+ILF++GQP K IVGAKGKAALLREL VV Sbjct 65 PATARDFQIMSIPTMILFENGQPTKTIVGAKGKAALLRELDAVV 108 >gi|326383898|ref|ZP_08205582.1| thioredoxin [Gordonia neofelifaecis NRRL B-59395] gi|326197357|gb|EGD54547.1| thioredoxin [Gordonia neofelifaecis NRRL B-59395] Length=111 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 74/106 (70%), Positives = 91/106 (86%), Gaps = 2/106 (1%) Query 9 TIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 T+ VTDASF +DV+ S++KPVLVDFWATWCGPCKMVAPVLEE+A + LTVAK+DVD Sbjct 5 TVAVTDASFTSDVIESSASKPVLVDFWATWCGPCKMVAPVLEELARDNGDKLTVAKVDVD 64 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP AR +Q++SIPT++LF+DG+PVK I+GAK KAALLRELSDV+ Sbjct 65 QNPNVAREYQIMSIPTMMLFQDGKPVKTIMGAKPKAALLRELSDVL 110 >gi|256381063|ref|YP_003104723.1| thioredoxin [Actinosynnema mirum DSM 43827] gi|255925366|gb|ACU40877.1| thioredoxin [Actinosynnema mirum DSM 43827] Length=108 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 72/106 (68%), Positives = 90/106 (85%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 +T+ V+D +FA DVL+S KPVLVDFWATWCGPCKMVAPVLEEIA E A +TVAKLD+D Sbjct 3 GSTVVVSDKTFADDVLTSEKPVLVDFWATWCGPCKMVAPVLEEIAAEHADKITVAKLDID 62 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP AR++Q++S+PTLILF+ G+ VK+IVGAK KAALL +L+DV+ Sbjct 63 ANPGIARDYQIMSVPTLILFQGGRAVKQIVGAKPKAALLNDLADVL 108 >gi|343928724|ref|ZP_08768169.1| thioredoxin [Gordonia alkanivorans NBRC 16433] gi|343761473|dbj|GAA15095.1| thioredoxin [Gordonia alkanivorans NBRC 16433] Length=112 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 73/104 (71%), Positives = 85/104 (82%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 T+ V D +F VL ++KPVLVDFWATWCGPC+MVAPVLEEIA + LT+AKLDVD + Sbjct 5 TVVVNDTTFKDTVLGADKPVLVDFWATWCGPCRMVAPVLEEIARDHGDKLTIAKLDVDES 64 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P TAR+FQ++SIPT+ILF GQPVK IVGAKGKAALLREL VV Sbjct 65 PATARDFQIMSIPTMILFDKGQPVKTIVGAKGKAALLRELDSVV 108 >gi|296392455|ref|YP_003657339.1| thioredoxin [Segniliparus rotundus DSM 44985] gi|296179602|gb|ADG96508.1| thioredoxin [Segniliparus rotundus DSM 44985] Length=109 Score = 154 bits (389), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 75/109 (69%), Positives = 89/109 (82%), Gaps = 1/109 (0%) Query 1 MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTV 60 M DSE S T+ VTD SFA DVL+S +PVLVDFWA WCGPC+MVAPVLEEIA E+A L V Sbjct 1 MADSE-SKTLTVTDNSFAQDVLASEQPVLVDFWAAWCGPCRMVAPVLEEIAKEQAGKLVV 59 Query 61 AKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELS 109 AKLDVD NP+T+ + V SIP LILF++G+PVK+I+GAK KAA+LREL Sbjct 60 AKLDVDANPKTSTKYDVNSIPNLILFQNGEPVKQIIGAKPKAAILRELG 108 >gi|258655498|ref|YP_003204654.1| thioredoxin [Nakamurella multipartita DSM 44233] gi|258558723|gb|ACV81665.1| thioredoxin [Nakamurella multipartita DSM 44233] Length=107 Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 67/105 (64%), Positives = 90/105 (86%), Gaps = 0/105 (0%) Query 8 ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT 67 AT+KVTD SF TDVL S+KPV+VDFWA WCGPC+MVAP+LEEIAT+ +TVAKLD+D Sbjct 2 ATVKVTDDSFTTDVLQSDKPVIVDFWAEWCGPCRMVAPILEEIATKHEGKVTVAKLDIDA 61 Query 68 NPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP+ A+ +Q++SIPT+++F+ G+PVK++VGAK KAALL E +D++ Sbjct 62 NPQIAQQYQILSIPTMLVFQGGKPVKQVVGAKPKAALLAEFADIL 106 >gi|331700381|ref|YP_004336620.1| thioredoxin [Pseudonocardia dioxanivorans CB1190] gi|326955070|gb|AEA28767.1| thioredoxin [Pseudonocardia dioxanivorans CB1190] Length=109 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 73/104 (71%), Positives = 87/104 (84%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 T+ VTDASF DVL S+K VLVDFWATWCGPCKMVAPVL+EIA E + LTVAKLD+D N Sbjct 5 TVDVTDASFEADVLKSDKTVLVDFWATWCGPCKMVAPVLDEIAGEHSDKLTVAKLDIDVN 64 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 +TA +QV+SIPT+ILFKDG+PVK IVGA+ KAALL +L+D + Sbjct 65 SKTAAAYQVMSIPTMILFKDGKPVKTIVGARPKAALLSDLADYI 108 >gi|284993428|ref|YP_003411983.1| thioredoxin [Geodermatophilus obscurus DSM 43160] gi|284066674|gb|ADB77612.1| thioredoxin [Geodermatophilus obscurus DSM 43160] Length=108 Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 68/104 (66%), Positives = 87/104 (84%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 T+ VTDA+FA DVL S+KPVLVDFWA WCGPCKMVAPVLEEIA E A LT+AKL++D N Sbjct 5 TVTVTDATFADDVLGSDKPVLVDFWAEWCGPCKMVAPVLEEIAAEHADKLTIAKLNIDEN 64 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P+ AR++QV+SIPT+ +F+ G+PVK I+GAK K A+L +L+D + Sbjct 65 PQIARDYQVMSIPTMTVFQGGKPVKSIIGAKPKGAILSDLADYL 108 >gi|325003244|ref|ZP_08124356.1| thioredoxin [Pseudonocardia sp. P1] Length=107 Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 72/104 (70%), Positives = 85/104 (82%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 TI VT SF DVL S+K VLVDFWATWCGPCKMVAPVL+EIA E LTVAKLD+D N Sbjct 4 TIDVTTGSFDQDVLKSDKAVLVDFWATWCGPCKMVAPVLDEIAGENTEKLTVAKLDIDAN 63 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 PE AR++QV+S+PT+ILF G+PVK+IVGAK KAALL +L+D + Sbjct 64 PEVARDYQVMSVPTMILFSGGKPVKQIVGAKPKAALLADLADHI 107 >gi|134103805|ref|YP_001109466.1| thioredoxin reductase [Saccharopolyspora erythraea NRRL 2338] gi|291005737|ref|ZP_06563710.1| thioredoxin reductase [Saccharopolyspora erythraea NRRL 2338] gi|133916428|emb|CAM06541.1| thioredoxin reductase [Saccharopolyspora erythraea NRRL 2338] Length=108 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/104 (67%), Positives = 80/104 (77%), Gaps = 0/104 (0%) Query 9 TIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN 68 T+ V SF + VL S+KPVLVDFWATWCGPCKMVAPVLEEIA E LTVAKLD+D N Sbjct 5 TVTVDTDSFKSVVLDSDKPVLVDFWATWCGPCKMVAPVLEEIAGEHGDKLTVAKLDIDKN 64 Query 69 PETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 P +QV+SIPTL+LF G+PVK+IVGAK KAALL +L D + Sbjct 65 PSLQSEYQVMSIPTLLLFSGGEPVKQIVGAKPKAALLSDLQDYL 108 >gi|296141897|ref|YP_003649140.1| thioredoxin [Tsukamurella paurometabola DSM 20162] gi|296030031|gb|ADG80801.1| thioredoxin [Tsukamurella paurometabola DSM 20162] Length=111 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 65/96 (68%), Positives = 79/96 (83%), Gaps = 0/96 (0%) Query 17 FATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQ 76 F VL S+KPVLVDFWATWCGPCKMVAPVLE+IA + A L VAK+DVD NP R++Q Sbjct 16 FKATVLESSKPVLVDFWATWCGPCKMVAPVLEQIAADHADSLVVAKVDVDANPAAPRDYQ 75 Query 77 VVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 V+SIPTLILFKDG+PV ++VGAK K+A+L+EL V+ Sbjct 76 VLSIPTLILFKDGEPVAKLVGAKSKSAILKELEAVL 111 >gi|86743212|ref|YP_483612.1| thioredoxin [Frankia sp. CcI3] gi|86570074|gb|ABD13883.1| thioredoxin [Frankia sp. CcI3] Length=108 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/103 (67%), Positives = 81/103 (79%), Gaps = 0/103 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 +T VTD++F T+VL S+KPVLVDFWA WCGPCKMVAPVLEEIA E L V KL++D Sbjct 3 GSTTPVTDSTFVTEVLESDKPVLVDFWAEWCGPCKMVAPVLEEIAKEHGEKLRVVKLNID 62 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELS 109 NPETARN+Q++SIPT+ +F G K IVGAK KAALLR+LS Sbjct 63 ENPETARNYQIMSIPTMAVFVKGVIDKSIVGAKPKAALLRDLS 105 >gi|271970542|ref|YP_003344738.1| thioredoxin [Streptosporangium roseum DSM 43021] gi|270513717|gb|ACZ91995.1| thioredoxin [Streptosporangium roseum DSM 43021] Length=107 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 65/106 (62%), Positives = 82/106 (78%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 A VTDASF DVL S+KPV+VDFWA WCGPC+ VAP+LEEIA E+A LT+ KL+VD Sbjct 2 GAIKNVTDASFDADVLKSDKPVIVDFWAEWCGPCRQVAPILEEIANEQADKLTIVKLNVD 61 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP TA N+ V+ IPTL ++K+G+ VK+I+GAK KA LLREL ++ Sbjct 62 ENPSTAGNYGVLQIPTLNVYKNGEVVKQIIGAKPKAMLLRELEGII 107 >gi|158319046|ref|YP_001511554.1| thioredoxin [Frankia sp. EAN1pec] gi|158114451|gb|ABW16648.1| thioredoxin [Frankia sp. EAN1pec] Length=108 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 65/106 (62%), Positives = 81/106 (77%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 +T VTD +FA +VL S+KPVLVDFWA WCGPCKMVAPVLEEIA E L + KL++D Sbjct 3 GSTPAVTDGTFAAEVLKSDKPVLVDFWAEWCGPCKMVAPVLEEIAKEHGEKLRIVKLNID 62 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NPE AR +Q++SIPT+ +F +G+ K IVGAK KAALLR+LS + Sbjct 63 ENPEVARQYQIMSIPTMAVFVNGEIDKSIVGAKPKAALLRDLSSYI 108 >gi|311897297|dbj|BAJ29705.1| putative thioredoxin [Kitasatospora setae KM-6054] Length=108 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/106 (64%), Positives = 82/106 (78%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 AT +VTDA+F +VL S+KPVLVDFWATWCGPC+ VAPVLE+IA E LTV KLDVD Sbjct 3 GATKEVTDATFDAEVLKSDKPVLVDFWATWCGPCRQVAPVLEDIAAEHGDKLTVVKLDVD 62 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 N ETA + V+SIPTL ++K G+ VK I GA+ KAALLREL++ + Sbjct 63 ANQETAAAYNVISIPTLNVYKGGELVKTITGARPKAALLRELAEYL 108 >gi|159040578|ref|YP_001539831.1| thioredoxin [Salinispora arenicola CNS-205] gi|157919413|gb|ABW00841.1| thioredoxin [Salinispora arenicola CNS-205] Length=107 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 61/95 (65%), Positives = 79/95 (84%), Gaps = 0/95 (0%) Query 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPET 71 VTDASF TDVL S+KPVLVDFWA WCGPC+ V+P+LEEIA E A +T+ KL++D NPET Sbjct 7 VTDASFTTDVLKSDKPVLVDFWAEWCGPCRKVSPLLEEIAGEMADQVTIVKLNIDENPET 66 Query 72 ARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLR 106 ARN++V+S+PTL +FK+G+PV+ I GAK K L++ Sbjct 67 ARNYRVMSVPTLTVFKNGEPVQSIAGAKPKGELIK 101 >gi|111226206|ref|YP_717000.1| thioredoxin 1, redox factor [Frankia alni ACN14a] gi|111153738|emb|CAJ65496.1| thioredoxin 1, redox factor [Frankia alni ACN14a] Length=107 Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 64/106 (61%), Positives = 80/106 (76%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 + T VTD++F +VL S+ PVLVDFWA WCGPCKMV PVLEEIA E L + KL++D Sbjct 2 AGTTPVTDSTFTAEVLQSDVPVLVDFWAEWCGPCKMVGPVLEEIAKEHGEKLRIVKLNID 61 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NPETARN+Q++SIPT+ +F G+ K IVGAK KAALLR+LS + Sbjct 62 ENPETARNYQIMSIPTMAVFVKGEVDKSIVGAKPKAALLRDLSAYI 107 >gi|288921195|ref|ZP_06415481.1| thioredoxin [Frankia sp. EUN1f] gi|288347402|gb|EFC81693.1| thioredoxin [Frankia sp. EUN1f] Length=108 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 65/106 (62%), Positives = 82/106 (78%), Gaps = 0/106 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 AT VTD +FAT+VL S+KPVLVDFWA WCGPCKMVAPVLEEIA E L + KL++D Sbjct 3 GATGVVTDDTFATEVLKSDKPVLVDFWAEWCGPCKMVAPVLEEIAKEHGEKLRIVKLNID 62 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112 NP+ AR +Q++SIPT+ +F +G+ + IVGAK KAALLR+L+ V Sbjct 63 DNPQVAREYQIMSIPTMAVFVNGEVDRTIVGAKPKAALLRDLAAYV 108 >gi|254777651|ref|ZP_05219167.1| TrxC [Mycobacterium avium subsp. avium ATCC 25291] Length=75 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/75 (90%), Positives = 69/75 (92%), Gaps = 0/75 (0%) Query 42 MVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGK 101 MVAPVLEEIA+ER LTVAKLDVD NPETA+NFQVVSIPTLILFKDGQPVKRIVGAKGK Sbjct 1 MVAPVLEEIASERGDHLTVAKLDVDANPETAQNFQVVSIPTLILFKDGQPVKRIVGAKGK 60 Query 102 AALLRELSDVVPNLN 116 AALLRELSD VPNL Sbjct 61 AALLRELSDAVPNLG 75 >gi|302870717|ref|YP_003839354.1| thioredoxin [Micromonospora aurantiaca ATCC 27029] gi|302573576|gb|ADL49778.1| thioredoxin [Micromonospora aurantiaca ATCC 27029] Length=107 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 61/100 (61%), Positives = 79/100 (79%), Gaps = 0/100 (0%) Query 7 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66 AT VTDASF +DVL S+KPVLVDFWA WCGPC+ V+P+LEEIA E +T+ KL++D Sbjct 2 GATKAVTDASFVSDVLQSDKPVLVDFWAEWCGPCRKVSPLLEEIAGEMKDQVTIVKLNID 61 Query 67 TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLR 106 NPETAR ++V+S+PTL +FK+GQPV+ I GAK K L++ Sbjct 62 ENPETARAYRVMSVPTLTIFKNGQPVQSIAGAKPKGELVK 101 Lambda K H 0.316 0.130 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130541267802 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40