BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3917c
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
gi|15843551|ref|NP_338588.1| ParB family protein [Mycobacterium ... 681 0.0
gi|340628887|ref|YP_004747339.1| putative chromosome partitionin... 678 0.0
gi|289567874|ref|ZP_06448101.1| chromosome partitioning protein ... 634 6e-180
gi|339296722|gb|AEJ48833.1| ParB family protein [Mycobacterium t... 575 4e-162
gi|118620072|ref|YP_908404.1| chromosome partitioning protein Pa... 569 3e-160
gi|183985451|ref|YP_001853742.1| chromosome partitioning protein... 568 4e-160
gi|240168401|ref|ZP_04747060.1| chromosome partitioning protein ... 562 2e-158
gi|296167150|ref|ZP_06849557.1| plasmid partition ParA protein [... 552 3e-155
gi|41410441|ref|NP_963277.1| hypothetical protein MAP4343c [Myco... 547 8e-154
gi|254818671|ref|ZP_05223672.1| ParB-like partition proteins [My... 527 1e-147
gi|342862345|ref|ZP_08718986.1| ParB-like partition protein [Myc... 520 1e-145
gi|15828464|ref|NP_302727.1| cell division protein [Mycobacteriu... 517 1e-144
gi|12230443|sp|Q50201.1|PARB_MYCLE RecName: Full=Probable chromo... 516 2e-144
gi|108802365|ref|YP_642562.1| chromosome segregation DNA-binding... 504 5e-141
gi|333992981|ref|YP_004525595.1| chromosome partitioning protein... 497 1e-138
gi|145221429|ref|YP_001132107.1| parB-like partition protein [My... 489 3e-136
gi|120407000|ref|YP_956829.1| parB-like partition proteins [Myco... 488 6e-136
gi|118471491|ref|YP_891131.1| ParB-like partition proteins [Myco... 484 9e-135
gi|169632022|ref|YP_001705671.1| chromosome partitioning protein... 469 3e-130
gi|54027640|ref|YP_121882.1| putative chromosome partitioning pr... 457 9e-127
gi|15808976|gb|AAL08578.1|AF418548_4 ParA [Mycobacterium avium s... 456 2e-126
gi|343928727|ref|ZP_08768172.1| chromosome partitioning protein ... 448 6e-124
gi|262204655|ref|YP_003275863.1| parB-like partition protein [Go... 447 2e-123
gi|229491225|ref|ZP_04385053.1| ParB-like partition protein [Rho... 444 1e-122
gi|226309509|ref|YP_002769471.1| chromosome partitioning protein... 442 4e-122
gi|111020643|ref|YP_703615.1| chromosome partitioning protein [R... 435 5e-120
gi|296141900|ref|YP_003649143.1| parB-like partition protein [Ts... 434 1e-119
gi|226362886|ref|YP_002780666.1| chromosome partitioning protein... 431 1e-118
gi|325677532|ref|ZP_08157196.1| chromosome partition ParA protei... 427 1e-117
gi|312142020|ref|YP_004009356.1| chromosome partitioning protein... 418 7e-115
gi|257057909|ref|YP_003135741.1| chromosome segregation DNA-bind... 412 5e-113
gi|333922230|ref|YP_004495811.1| putative chromosome partitionin... 404 1e-110
gi|326383901|ref|ZP_08205585.1| parB-like partition protein [Gor... 403 3e-110
gi|300791158|ref|YP_003771449.1| chromosome partitioning protein... 399 4e-109
gi|302531350|ref|ZP_07283692.1| chromosome partitioning [Strepto... 390 1e-106
gi|256381068|ref|YP_003104728.1| parB-like partition protein [Ac... 381 9e-104
gi|331700387|ref|YP_004336626.1| parB-like partition protein [Ps... 380 2e-103
gi|324999874|ref|ZP_08120986.1| parB-like partition protein [Pse... 366 3e-99
gi|300780165|ref|ZP_07090021.1| plasmid partition ParA protein [... 364 9e-99
gi|311741706|ref|ZP_07715528.1| chromosome partitioning protein ... 363 2e-98
gi|306834792|ref|ZP_07467856.1| ParB family protein [Corynebacte... 362 3e-98
gi|255324014|ref|ZP_05365139.1| ParB-like partition protein [Cor... 362 4e-98
gi|227502234|ref|ZP_03932283.1| stage 0 DNA-binding protein [Cor... 362 6e-98
gi|319949439|ref|ZP_08023500.1| parB-like partition protein [Die... 360 1e-97
gi|300859521|ref|YP_003784504.1| chromosome partitioning protein... 357 1e-96
gi|302207204|gb|ADL11546.1| Chromosome partitioning protein ParB... 357 2e-96
gi|317509420|ref|ZP_07967038.1| ParB partition protein [Segnilip... 355 4e-96
gi|334697919|gb|AEG82716.1| chromosome partitioning protein [Cor... 355 5e-96
gi|337291948|ref|YP_004630969.1| chromosome partitioning protein... 355 5e-96
gi|305681627|ref|ZP_07404433.1| ParB-like protein [Corynebacteri... 354 1e-95
>gi|15843551|ref|NP_338588.1| ParB family protein [Mycobacterium tuberculosis CDC1551]
gi|31795090|ref|NP_857583.1| chromosome partitioning protein ParB [Mycobacterium bovis AF2122/97]
gi|57117170|ref|NP_218435.2| chromosome partitioning protein ParB [Mycobacterium tuberculosis
H37Rv]
78 more sequence titles
Length=344
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY
Sbjct 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE
Sbjct 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH
Sbjct 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR
Sbjct 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT
Sbjct 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKGLHRDAL 344
RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKGLHRDAL
Sbjct 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKGLHRDAL 344
>gi|340628887|ref|YP_004747339.1| putative chromosome partitioning protein PARB [Mycobacterium
canettii CIPT 140010059]
gi|340007077|emb|CCC46268.1| putative chromosome partitioning protein PARB [Mycobacterium
canettii CIPT 140010059]
Length=344
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/344 (99%), Positives = 343/344 (99%), Gaps = 0/344 (0%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY
Sbjct 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE
Sbjct 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH
Sbjct 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELAAR+GRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR
Sbjct 181 DELAARLGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT
Sbjct 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKGLHRDAL 344
RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTD RDKGLHRDAL
Sbjct 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDSRDKGLHRDAL 344
>gi|289567874|ref|ZP_06448101.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T17]
gi|289541627|gb|EFD45276.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T17]
Length=344
Score = 634 bits (1635), Expect = 6e-180, Method: Compositional matrix adjust.
Identities = 320/320 (100%), Positives = 320/320 (100%), Gaps = 0/320 (0%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY
Sbjct 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE
Sbjct 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH
Sbjct 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR
Sbjct 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT
Sbjct 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
Query 301 RVTVSLGKRKGKIVVEFGSV 320
RVTVSLGKRKGKIVVEFGSV
Sbjct 301 RVTVSLGKRKGKIVVEFGSV 320
>gi|339296722|gb|AEJ48833.1| ParB family protein [Mycobacterium tuberculosis CCDC5079]
gi|339300314|gb|AEJ52424.1| ParB family protein [Mycobacterium tuberculosis CCDC5180]
Length=290
Score = 575 bits (1482), Expect = 4e-162, Method: Compositional matrix adjust.
Identities = 289/290 (99%), Positives = 290/290 (100%), Gaps = 0/290 (0%)
Query 55 VMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRY 114
+MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRY
Sbjct 1 MMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRY 60
Query 115 QIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLD 174
QIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLD
Sbjct 61 QIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLD 120
Query 175 EFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQ 234
EFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQ
Sbjct 121 EFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQ 180
Query 235 EELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERL 294
EELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERL
Sbjct 181 EELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERL 240
Query 295 STTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKGLHRDAL 344
STTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKGLHRDAL
Sbjct 241 STTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKGLHRDAL 290
>gi|118620072|ref|YP_908404.1| chromosome partitioning protein ParB [Mycobacterium ulcerans
Agy99]
gi|118572182|gb|ABL06933.1| chromosome partitioning protein ParB [Mycobacterium ulcerans
Agy99]
Length=327
Score = 569 bits (1466), Expect = 3e-160, Method: Compositional matrix adjust.
Identities = 289/331 (88%), Positives = 302/331 (92%), Gaps = 8/331 (2%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQPSRRKGGLGRGLA+LIPTGPA+GESG GPRMGSA ADVVIGGPV D + MGA+Y
Sbjct 1 MTQPSRRKGGLGRGLASLIPTGPAEGESGAQGFGPRMGSAAADVVIGGPVADAAAMGAVY 60
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REI P IEANPRQPRQVFDEEAL+ELVHSIREFGLLQPIVVR++ G+Q+G YQIVMGE
Sbjct 61 REIAPGDIEANPRQPRQVFDEEALSELVHSIREFGLLQPIVVRAVDGAQSGAPYQIVMGE 120
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH
Sbjct 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR
Sbjct 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEGLSVRATEE VTLAN SDA+T PPRRKPIQMPGLQDVA+RLS FDT
Sbjct 241 IVAEGLSVRATEEAVTLAN--------RSDASTSTPPRRKPIQMPGLQDVADRLSNAFDT 292
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
RVTVSLGKRKGKIVVEFGSVDDL RI+G+MT
Sbjct 293 RVTVSLGKRKGKIVVEFGSVDDLQRIIGIMT 323
>gi|183985451|ref|YP_001853742.1| chromosome partitioning protein ParB [Mycobacterium marinum M]
gi|183178777|gb|ACC43887.1| chromosome partitioning protein ParB [Mycobacterium marinum M]
Length=327
Score = 568 bits (1465), Expect = 4e-160, Method: Compositional matrix adjust.
Identities = 289/331 (88%), Positives = 302/331 (92%), Gaps = 8/331 (2%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQPSRRKGGLGRGLA+LIPTGPA+GES GPRMGSA ADVVIGGPV D + MGA+Y
Sbjct 1 MTQPSRRKGGLGRGLASLIPTGPAEGESDAQGFGPRMGSAAADVVIGGPVADAAAMGAVY 60
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REI P IEANPRQPRQVFDEEAL+ELVHSIREFGLLQPIVVR++ G+Q+G YQIVMGE
Sbjct 61 REIAPGDIEANPRQPRQVFDEEALSELVHSIREFGLLQPIVVRTVDGAQSGAPYQIVMGE 120
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH
Sbjct 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR
Sbjct 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEGLSVRATEE VTLAN SDA+TP PPRRKPIQMPGLQDVA+RLS FDT
Sbjct 241 IVAEGLSVRATEEAVTLAN--------RSDASTPTPPRRKPIQMPGLQDVADRLSNAFDT 292
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
RVTVSLGKRKGKIVVEFGSVDDL RI+G+MT
Sbjct 293 RVTVSLGKRKGKIVVEFGSVDDLQRIIGIMT 323
>gi|240168401|ref|ZP_04747060.1| chromosome partitioning protein ParB [Mycobacterium kansasii
ATCC 12478]
Length=326
Score = 562 bits (1449), Expect = 2e-158, Method: Compositional matrix adjust.
Identities = 289/331 (88%), Positives = 301/331 (91%), Gaps = 9/331 (2%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQPSRRKGGLGRGLA+LIPTGPADGESGP + GPRMGSATADVVIGGP D S MGA+Y
Sbjct 1 MTQPSRRKGGLGRGLASLIPTGPADGESGP-SFGPRMGSATADVVIGGPALDASPMGAVY 59
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REI PS IEANPRQPRQVFD+EAL ELVHSIREFGLLQPIVVR++ + +G YQIVMGE
Sbjct 60 REIAPSDIEANPRQPRQVFDQEALQELVHSIREFGLLQPIVVRAIEATPSGAHYQIVMGE 119
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQEAGLATIPAIVRETGDD+LLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH
Sbjct 120 RRWRAAQEAGLATIPAIVRETGDDSLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 179
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR
Sbjct 180 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 239
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEGLSVRATEE VTLAN + +TP PPRRKPI MPGLQDVAERLST FDT
Sbjct 240 IVAEGLSVRATEEAVTLAN--------RAGTSTPTPPRRKPIHMPGLQDVAERLSTAFDT 291
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
RVTVSLGKRKGKIVVEFGSVDDL RI+GLMT
Sbjct 292 RVTVSLGKRKGKIVVEFGSVDDLQRIIGLMT 322
>gi|296167150|ref|ZP_06849557.1| plasmid partition ParA protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897472|gb|EFG77071.1| plasmid partition ParA protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=327
Score = 552 bits (1422), Expect = 3e-155, Method: Compositional matrix adjust.
Identities = 282/331 (86%), Positives = 301/331 (91%), Gaps = 8/331 (2%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQP R+KGGLGRGLA+LIPTGPA+G+SGP TLGPRMG A ADV+IGGP PD + GA+Y
Sbjct 1 MTQPLRKKGGLGRGLASLIPTGPAEGDSGPATLGPRMGDAAADVLIGGPGPDLAPAGAVY 60
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REI P+ IE NPRQPRQVFD+EAL+ELVHSIREFGLLQPIVVR++ G++TG RYQIVMGE
Sbjct 61 REIAPADIEPNPRQPRQVFDDEALSELVHSIREFGLLQPIVVRAVPGAKTGPRYQIVMGE 120
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQEAGLATIP IVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH
Sbjct 121 RRWRAAQEAGLATIPTIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELA+RIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR
Sbjct 181 DELASRIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEGLSVRATEE VTLAN + ATTPAP RRKPIQMPGLQ+VAERLS FDT
Sbjct 241 IVAEGLSVRATEEAVTLAN--------RAGATTPAPQRRKPIQMPGLQEVAERLSNAFDT 292
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
RVTVSLGKRKGKIVVEFGSVDDL RI+ +MT
Sbjct 293 RVTVSLGKRKGKIVVEFGSVDDLQRIIDMMT 323
>gi|41410441|ref|NP_963277.1| hypothetical protein MAP4343c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464564|ref|YP_884416.1| ParB-like partition proteins [Mycobacterium avium 104]
gi|254777654|ref|ZP_05219170.1| ParB-like partition proteins [Mycobacterium avium subsp. avium
ATCC 25291]
gi|41399275|gb|AAS06893.1| ParA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165851|gb|ABK66748.1| ParB-like partition proteins [Mycobacterium avium 104]
gi|336459808|gb|EGO38722.1| ParB-like partition protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=328
Score = 547 bits (1410), Expect = 8e-154, Method: Compositional matrix adjust.
Identities = 281/331 (85%), Positives = 299/331 (91%), Gaps = 9/331 (2%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVP-DTSVMGAI 59
MTQP R+KGGLGRGLA+LIPTGPA+G++GP TLGPRMG A ADV+IGGP P + S +GA+
Sbjct 1 MTQPLRKKGGLGRGLASLIPTGPAEGDAGPATLGPRMGDAAADVLIGGPAPQEASPVGAV 60
Query 60 YREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMG 119
YREI P+ IE NPRQPRQVFDEEALAELVHSIREFGLLQPIVVR++ S +G RYQIVMG
Sbjct 61 YREISPADIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMG 120
Query 120 ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 179
ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT
Sbjct 121 ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 180
Query 180 HDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELAS 239
HDELAARIGRSRPLITNMIRLLKLPI VQRRVAAGVLSAGHARALLSLEAGPEAQEELA+
Sbjct 181 HDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELAT 240
Query 240 RIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFD 299
RIVAEGLSVRATEE VTLAN + TTP PPRRKPIQMPGLQDVA+RLST FD
Sbjct 241 RIVAEGLSVRATEEAVTLAN--------RAGTTTPTPPRRKPIQMPGLQDVADRLSTAFD 292
Query 300 TRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
TRVTVSLGKRKGKIVVEFGSVDDL RI+ +M
Sbjct 293 TRVTVSLGKRKGKIVVEFGSVDDLQRIIDVM 323
>gi|254818671|ref|ZP_05223672.1| ParB-like partition proteins [Mycobacterium intracellulare ATCC
13950]
Length=331
Score = 527 bits (1357), Expect = 1e-147, Method: Compositional matrix adjust.
Identities = 283/335 (85%), Positives = 300/335 (90%), Gaps = 12/335 (3%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPD----TSVM 56
MTQP R+KGGLGRGLA+LIPTGPA+G+SGP TLGPRMG A ADV+IGGP P T+ M
Sbjct 1 MTQPLRKKGGLGRGLASLIPTGPAEGDSGPATLGPRMGDAAADVLIGGPPPQDASATASM 60
Query 57 GAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQI 116
GA+YREI P+ IE NPRQPRQVFDEEALAELVHSIREFGLLQPIVVR++ S +G RYQI
Sbjct 61 GAVYREIAPADIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAVKDSASGARYQI 120
Query 117 VMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEF 176
VMGERRWRAAQEAGLATIPAIVRETGDD+LLRDALLENIHRVQLNPLEEAAAYQQLLDEF
Sbjct 121 VMGERRWRAAQEAGLATIPAIVRETGDDDLLRDALLENIHRVQLNPLEEAAAYQQLLDEF 180
Query 177 GVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEE 236
GVTHDELAARIGRSRPLITNMIRLLKLPI VQRRVAAGVLSAGHARALLSLEAGPEAQEE
Sbjct 181 GVTHDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEE 240
Query 237 LASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLST 296
LA+RIVAEGLSVRATEE VTLAN S AT P PPRRKPIQMPGLQDVA+RLST
Sbjct 241 LATRIVAEGLSVRATEEAVTLAN--------RSGATAPTPPRRKPIQMPGLQDVADRLST 292
Query 297 TFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
FDTRVTVSLGKRKGKIVVEFGSVDDL RI+ +M+
Sbjct 293 AFDTRVTVSLGKRKGKIVVEFGSVDDLQRIIEVMS 327
>gi|342862345|ref|ZP_08718986.1| ParB-like partition protein [Mycobacterium colombiense CECT 3035]
gi|342130202|gb|EGT83530.1| ParB-like partition protein [Mycobacterium colombiense CECT 3035]
Length=328
Score = 520 bits (1339), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 278/332 (84%), Positives = 299/332 (91%), Gaps = 9/332 (2%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVP-DTSVMGAI 59
MTQP R+KGGLGRGLA+LIPTGPA+G++GP TLGPRMG A ADV+IGGP P D S +GA+
Sbjct 1 MTQPLRKKGGLGRGLASLIPTGPAEGDTGPATLGPRMGDAAADVLIGGPPPQDASSVGAV 60
Query 60 YREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMG 119
YREI P+ IE NPRQPRQVFDEEAL+ELVHSIREFGLLQPIVVR++ S +G RYQIVMG
Sbjct 61 YREIAPADIERNPRQPRQVFDEEALSELVHSIREFGLLQPIVVRAVKDSASGARYQIVMG 120
Query 120 ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 179
ERRWRAAQEAGLATIPAIVRETGDD+LLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT
Sbjct 121 ERRWRAAQEAGLATIPAIVRETGDDDLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 180
Query 180 HDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELAS 239
HDELAARIGRSRPLITNMIRLLKLPI VQRRVAAGVLSAGHARALLSLEAGPEAQEELA+
Sbjct 181 HDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELAT 240
Query 240 RIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFD 299
RIVAEGLSVRATEE VTLAN A+TP PRRKPIQMPGLQDVA++LST FD
Sbjct 241 RIVAEGLSVRATEEAVTLAN--------RGGASTPTAPRRKPIQMPGLQDVADKLSTAFD 292
Query 300 TRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
TRVTVSLGKRKGKIVVEFGSVDDL RI+ +M+
Sbjct 293 TRVTVSLGKRKGKIVVEFGSVDDLQRIIEVMS 324
>gi|15828464|ref|NP_302727.1| cell division protein [Mycobacterium leprae TN]
gi|221230941|ref|YP_002504357.1| putative cell division protein [Mycobacterium leprae Br4923]
gi|13093894|emb|CAC32238.1| putative cell division protein [Mycobacterium leprae]
gi|219934048|emb|CAR72806.1| putative cell division protein [Mycobacterium leprae Br4923]
Length=335
Score = 517 bits (1331), Expect = 1e-144, Method: Compositional matrix adjust.
Identities = 261/332 (79%), Positives = 282/332 (85%), Gaps = 2/332 (0%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQ +KGGLGRGLA+LIPTGP D +SGP T GP+MG+ ADV+IGG + MGA+Y
Sbjct 3 MTQSLCKKGGLGRGLASLIPTGPVDADSGPATYGPQMGNTAADVLIGGSAQKDNAMGAVY 62
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REI S I NP QPRQVFD+EA++ELVHSIREFGLLQPIVVR +GS RYQIVMGE
Sbjct 63 REIALSDITENPCQPRQVFDDEAMSELVHSIREFGLLQPIVVRPASGSCGDTRYQIVMGE 122
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQ+AGL+ IPAIVR TGDD++LRDALLENIHRVQLNPLEEAAAYQQLLDEF VTH
Sbjct 123 RRWRAAQQAGLSFIPAIVRATGDDSMLRDALLENIHRVQLNPLEEAAAYQQLLDEFEVTH 182
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELA+RIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEA PE QEELASR
Sbjct 183 DELASRIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEANPEVQEELASR 242
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
I+AEGLSVRATEE V LANHE NR + + TP P RRKPI MPGLQDVAERLS FDT
Sbjct 243 IIAEGLSVRATEEAVKLANHEVNRV--NREVITPVPQRRKPICMPGLQDVAERLSNAFDT 300
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTT 332
RV VSLGKRKGKIVVEF SVDDL RIV +MTT
Sbjct 301 RVMVSLGKRKGKIVVEFSSVDDLQRIVDVMTT 332
>gi|12230443|sp|Q50201.1|PARB_MYCLE RecName: Full=Probable chromosome-partitioning protein parB
gi|886318|gb|AAB53134.1| ORF333; hypothetical 35.8 Kd protein; similar to hypothetical
32.4 kd protein in GIDB-UNCI intergenic region of P.putida
and to 32.8 kd protein in SPO0J-GIDB intergenic region of B.
subtilis; putative [Mycobacterium leprae]
Length=333
Score = 516 bits (1329), Expect = 2e-144, Method: Compositional matrix adjust.
Identities = 261/332 (79%), Positives = 282/332 (85%), Gaps = 2/332 (0%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
MTQ +KGGLGRGLA+LIPTGP D +SGP T GP+MG+ ADV+IGG + MGA+Y
Sbjct 1 MTQSLCKKGGLGRGLASLIPTGPVDADSGPATYGPQMGNTAADVLIGGSAQKDNAMGAVY 60
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
REI S I NP QPRQVFD+EA++ELVHSIREFGLLQPIVVR +GS RYQIVMGE
Sbjct 61 REIALSDITENPCQPRQVFDDEAMSELVHSIREFGLLQPIVVRPASGSCGDTRYQIVMGE 120
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RRWRAAQ+AGL+ IPAIVR TGDD++LRDALLENIHRVQLNPLEEAAAYQQLLDEF VTH
Sbjct 121 RRWRAAQQAGLSFIPAIVRATGDDSMLRDALLENIHRVQLNPLEEAAAYQQLLDEFEVTH 180
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
DELA+RIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEA PE QEELASR
Sbjct 181 DELASRIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEANPEVQEELASR 240
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
I+AEGLSVRATEE V LANHE NR + + TP P RRKPI MPGLQDVAERLS FDT
Sbjct 241 IIAEGLSVRATEEAVKLANHEVNRV--NREVITPVPQRRKPICMPGLQDVAERLSNAFDT 298
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMTT 332
RV VSLGKRKGKIVVEF SVDDL RIV +MTT
Sbjct 299 RVMVSLGKRKGKIVVEFSSVDDLQRIVDVMTT 330
>gi|108802365|ref|YP_642562.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
MCS]
gi|119866058|ref|YP_936010.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
KMS]
gi|126438345|ref|YP_001074036.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
JLS]
gi|108772784|gb|ABG11506.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
MCS]
gi|119692147|gb|ABL89220.1| parB-like partition protein [Mycobacterium sp. KMS]
gi|126238145|gb|ABO01546.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
JLS]
Length=330
Score = 504 bits (1299), Expect = 5e-141, Method: Compositional matrix adjust.
Identities = 267/335 (80%), Positives = 286/335 (86%), Gaps = 11/335 (3%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG-PV--PDTSVMG 57
MTQP+R++ GLGRGLA+LIPTGP + S GPRMG+A ADVVIGG PV P +G
Sbjct 1 MTQPTRKRSGLGRGLASLIPTGPTEDGSQAALGGPRMGNAAADVVIGGGPVAAPPAPELG 60
Query 58 AIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIV 117
A+YREI PSAIE NPRQPRQVFD EALAELVHSIREFGL+QPIVVR+L G RYQ+V
Sbjct 61 AVYREIDPSAIEPNPRQPRQVFDGEALAELVHSIREFGLMQPIVVRALEPGDAGPRYQLV 120
Query 118 MGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFG 177
MGERRWRAAQEAGLATIPAIVRET DD++LRDALLENIHRVQLNPLEEAAAYQQLLDEFG
Sbjct 121 MGERRWRAAQEAGLATIPAIVRETADDSMLRDALLENIHRVQLNPLEEAAAYQQLLDEFG 180
Query 178 VTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEEL 237
VTHDELAARIGRSRP+ITNMIRLL+LPI VQRRVAAGVLSAGHARALL+LE GPE QEEL
Sbjct 181 VTHDELAARIGRSRPVITNMIRLLRLPIAVQRRVAAGVLSAGHARALLALEGGPERQEEL 240
Query 238 ASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTT 297
A+RIVAEGLSVRATEE VTLAN HS P PRRKPIQMPGLQDVAE+LST
Sbjct 241 AARIVAEGLSVRATEEAVTLAN--------HSGPAAPPAPRRKPIQMPGLQDVAEQLSTA 292
Query 298 FDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTT 332
FDTRVTVSLGKRKGKIVVEFGSVDDL RIV LM +
Sbjct 293 FDTRVTVSLGKRKGKIVVEFGSVDDLQRIVELMNS 327
>gi|333992981|ref|YP_004525595.1| chromosome partitioning protein ParB [Mycobacterium sp. JDM601]
gi|333488949|gb|AEF38341.1| chromosome partitioning protein ParB [Mycobacterium sp. JDM601]
Length=333
Score = 497 bits (1279), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 263/338 (78%), Positives = 287/338 (85%), Gaps = 14/338 (4%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPT----LGPRMGSATADVVIGGPVPDTSV- 55
MT PSR+KGGLGRGLA+LIPTGPADG S +GP MG A ADVV+GG P +
Sbjct 1 MTGPSRKKGGLGRGLASLIPTGPADGASTTADRGAGMGPGMGDAAADVVLGGATPAKAAE 60
Query 56 MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGV-RY 114
+GA+YREI P+ IE NPRQPRQVFD+EALAELVHSIREFGL+QPIVVR+L G+ G RY
Sbjct 61 VGAVYREISPADIEPNPRQPRQVFDDEALAELVHSIREFGLMQPIVVRALPGAAPGAARY 120
Query 115 QIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLD 174
Q+VMGERRWRA+Q+AGL IPAIVRET DDNLLRDALLENIHRVQLNPLEEAAAYQQLLD
Sbjct 121 QLVMGERRWRASQQAGLEAIPAIVRETDDDNLLRDALLENIHRVQLNPLEEAAAYQQLLD 180
Query 175 EFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQ 234
EFGVTHDELAAR+GRSRPL+TNMIRLL+LPI VQRRVAAGVLSAGHARALLSLE G EAQ
Sbjct 181 EFGVTHDELAARLGRSRPLVTNMIRLLRLPIAVQRRVAAGVLSAGHARALLSLEGGSEAQ 240
Query 235 EELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERL 294
E+LA+RIVAEGLSVRATEE VTLAN D +TP PRRKPI MPGLQDVAERL
Sbjct 241 EQLAARIVAEGLSVRATEEAVTLAN--------RGDTSTPVAPRRKPIHMPGLQDVAERL 292
Query 295 STTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTT 332
S+ FDTRVTVSLGKRKGKIVVEFGSVDDL RIV LM++
Sbjct 293 SSAFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVALMSS 330
>gi|145221429|ref|YP_001132107.1| parB-like partition protein [Mycobacterium gilvum PYR-GCK]
gi|315446819|ref|YP_004079698.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
Spyr1]
gi|145213915|gb|ABP43319.1| chromosome segregation DNA-binding protein [Mycobacterium gilvum
PYR-GCK]
gi|315265122|gb|ADU01864.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
Spyr1]
Length=331
Score = 489 bits (1258), Expect = 3e-136, Method: Compositional matrix adjust.
Identities = 260/337 (78%), Positives = 285/337 (85%), Gaps = 16/337 (4%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPAD-GESGPPTLGPRMGSATADVVIGG-PVP---DTSV 55
M + + ++ GLGRGLA+LIPTGP + GES TLGP+MG A ADV++GG P P DT+
Sbjct 1 MNKQAGKRSGLGRGLASLIPTGPVESGESA--TLGPKMGGAAADVLLGGAPAPAQTDTNP 58
Query 56 MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSL-AGSQTGVRY 114
GA+YREI PS I+ NPRQPRQVFDEEALAELVHSIREFGL+QPIVVR++ RY
Sbjct 59 AGAVYREIAPSQIDPNPRQPRQVFDEEALAELVHSIREFGLMQPIVVRAVPVDGDESPRY 118
Query 115 QIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLD 174
Q+VMGERRWRAAQ+AG+ATIPAIVRET DDNLLRDALLENIHRVQLNPLEEAAAYQQLL+
Sbjct 119 QLVMGERRWRAAQQAGVATIPAIVRETADDNLLRDALLENIHRVQLNPLEEAAAYQQLLE 178
Query 175 EFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQ 234
EF VTH+ELA+RIGRSRPLITNMIRLL+LPIPVQRRVAAGVLSAGHARALLSL+ GPE Q
Sbjct 179 EFEVTHEELASRIGRSRPLITNMIRLLRLPIPVQRRVAAGVLSAGHARALLSLDGGPEVQ 238
Query 235 EELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERL 294
EELA+RIVAEGLSVRATEE VTLAN T PA PRRKPIQMPGLQDVAE+L
Sbjct 239 EELAARIVAEGLSVRATEEAVTLANRNGT--------TPPAAPRRKPIQMPGLQDVAEQL 290
Query 295 STTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
ST FDTRVTVSLGKRKGKIVVEFGSVDDL RIV LM
Sbjct 291 STAFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVELMN 327
>gi|120407000|ref|YP_956829.1| parB-like partition proteins [Mycobacterium vanbaalenii PYR-1]
gi|119959818|gb|ABM16823.1| chromosome segregation DNA-binding protein [Mycobacterium vanbaalenii
PYR-1]
Length=334
Score = 488 bits (1256), Expect = 6e-136, Method: Compositional matrix adjust.
Identities = 259/339 (77%), Positives = 285/339 (85%), Gaps = 17/339 (5%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG-PVP-----DTS 54
M +R++ GLGRGLA+LIPTGPA+G P TLGP+MG+A ADVV+GG PV D +
Sbjct 1 MNNQARKRSGLGRGLASLIPTGPAEG-GEPATLGPKMGAAAADVVLGGAPVAPPASTDVN 59
Query 55 VMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQ--TGV 112
+GA+YREI PS I+ NPRQPRQVFDEEALAELVHSIREFGL+QPIVVR+ G + +
Sbjct 60 PVGAVYREIAPSQIDPNPRQPRQVFDEEALAELVHSIREFGLMQPIVVRATPGGEGESSD 119
Query 113 RYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQL 172
RYQ+VMGERRWRAAQ AG+ATIPAIVRET DD++LRDALLENIHRVQLNPLEEAAAYQQL
Sbjct 120 RYQLVMGERRWRAAQLAGVATIPAIVRETADDSMLRDALLENIHRVQLNPLEEAAAYQQL 179
Query 173 LDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPE 232
L+EF VTH+ELA RIGRSRP+ITNMIRLL+LPI VQRRVAAGVLSAGHARALLSLEAGPE
Sbjct 180 LEEFDVTHNELATRIGRSRPVITNMIRLLRLPIAVQRRVAAGVLSAGHARALLSLEAGPE 239
Query 233 AQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAE 292
AQEELA+RIVAEGLSVRATEE VTLAN P PRRKPIQMPGLQDVAE
Sbjct 240 AQEELAARIVAEGLSVRATEEAVTLANRNGE--------APPTAPRRKPIQMPGLQDVAE 291
Query 293 RLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
+LST FDTRVTVSLGKRKGKIVVEFGSVDDL RIV LM
Sbjct 292 QLSTAFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVELMN 330
>gi|118471491|ref|YP_891131.1| ParB-like partition proteins [Mycobacterium smegmatis str. MC2
155]
gi|118172778|gb|ABK73674.1| ParB-like partition proteins [Mycobacterium smegmatis str. MC2
155]
Length=351
Score = 484 bits (1246), Expect = 9e-135, Method: Compositional matrix adjust.
Identities = 261/359 (73%), Positives = 285/359 (80%), Gaps = 40/359 (11%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG----PVP----- 51
M QP+R++ GLGRGLAALIPTGP DG P L P++G+ ADV++GG P P
Sbjct 1 MNQPARKRSGLGRGLAALIPTGPVDG--APDGLSPKIGATAADVLMGGAPSAPTPPAGTD 58
Query 52 -------------------DTSVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIR 92
D +GA YREI P+AIE NPRQPRQVFD+EAL+ELVHSIR
Sbjct 59 APAAPPEDGAAGDSAVQPLDRDEVGATYREIAPTAIEPNPRQPRQVFDDEALSELVHSIR 118
Query 93 EFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALL 152
EFGL+QPIVVR + + +RYQIVMGERRWRAAQ+AGL IPAIVRET DD +LRDALL
Sbjct 119 EFGLMQPIVVREVE-PKGDIRYQIVMGERRWRAAQQAGLTAIPAIVRETADDGMLRDALL 177
Query 153 ENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVA 212
ENIHRVQLNPLEEA+AYQQLLDEFGVTHDELAARIGRSRPLI+NMIRLL+LPI VQRRVA
Sbjct 178 ENIHRVQLNPLEEASAYQQLLDEFGVTHDELAARIGRSRPLISNMIRLLRLPIAVQRRVA 237
Query 213 AGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDAT 272
AGVLSAGHARALL+LE GPEAQEELA+RIVAEGLSVRATEE VTLAN E T
Sbjct 238 AGVLSAGHARALLALEGGPEAQEELAARIVAEGLSVRATEEAVTLANREGK--------T 289
Query 273 TPAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
TPA PRRKPIQMPGLQDVAERLST FDTRVTVSLGKRKGKIVVEFGSVDDL RIV LM+
Sbjct 290 TPA-PRRKPIQMPGLQDVAERLSTAFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVELMS 347
>gi|169632022|ref|YP_001705671.1| chromosome partitioning protein ParB [Mycobacterium abscessus
ATCC 19977]
gi|169243989|emb|CAM65017.1| Probable chromosome partitioning protein ParB [Mycobacterium
abscessus]
Length=330
Score = 469 bits (1207), Expect = 3e-130, Method: Compositional matrix adjust.
Identities = 254/337 (76%), Positives = 277/337 (83%), Gaps = 22/337 (6%)
Query 5 SRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSV-------MG 57
SRRKGGLGRGLA+LIPT P DG S P GP +G+A ADVVIGG + +G
Sbjct 7 SRRKGGLGRGLASLIPTAPVDGSSAPA--GPSLGAAAADVVIGGGPAPAAPAATPAADIG 64
Query 58 AIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIV 117
A+YREIP +AI+ NP+QPRQVFDEEALAELVHSIREFG++QPIVVR + YQ+V
Sbjct 65 AVYREIPVTAIKPNPKQPRQVFDEEALAELVHSIREFGVMQPIVVRVVDDGD----YQLV 120
Query 118 MGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFG 177
MGERRWRA QEAGL TIPAIVRET DDNLLRDALLENIHR QLNPLEEAAAYQQLLDEF
Sbjct 121 MGERRWRATQEAGLDTIPAIVRETADDNLLRDALLENIHRAQLNPLEEAAAYQQLLDEFE 180
Query 178 VTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEEL 237
VTH+ELAARIGRSRP+I+NMIRLL+LPI VQRRVAAGVLSAGHARALL+LE G AQEEL
Sbjct 181 VTHEELAARIGRSRPVISNMIRLLRLPIAVQRRVAAGVLSAGHARALLALEGGAGAQEEL 240
Query 238 ASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTT 297
A+RIVAEG+SVRA EE VTLAN SDA PA PRRKP+QMPGLQDVAERLS T
Sbjct 241 AARIVAEGMSVRAAEEAVTLAN--------RSDAPKPA-PRRKPMQMPGLQDVAERLSGT 291
Query 298 FDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDG 334
FDTRVTVSLGKRKGKIVVEFGSVDDL RIV LM+ +G
Sbjct 292 FDTRVTVSLGKRKGKIVVEFGSVDDLQRIVDLMSGEG 328
>gi|54027640|ref|YP_121882.1| putative chromosome partitioning protein [Nocardia farcinica
IFM 10152]
gi|54019148|dbj|BAD60518.1| putative chromosome partitioning protein [Nocardia farcinica
IFM 10152]
Length=360
Score = 457 bits (1177), Expect = 9e-127, Method: Compositional matrix adjust.
Identities = 251/353 (72%), Positives = 278/353 (79%), Gaps = 40/353 (11%)
Query 7 RKGGLGRGLAALIPTGPADGESG-------PPTLGPR-------MGSATADVVIG----G 48
+KGGLGRGLAALIPTGP +G P T P+ +G+A A+V+IG G
Sbjct 5 KKGGLGRGLAALIPTGPDTIPNGLTTPTAPPGTAKPKGLVTPNGLGTAAANVIIGVDPAG 64
Query 49 PVPD------------TSVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGL 96
P TS GA+YREIPP IE NP+QPRQVF+E+ALAELVHSIREFGL
Sbjct 65 AKPASPLRSDTQAEELTSPSGAVYREIPPDQIEPNPKQPRQVFEEDALAELVHSIREFGL 124
Query 97 LQPIVVRSLAGSQTGV-RYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENI 155
+QPIVVR L + GV +YQ+VMGERRWRA QEAGL IPAIVRET DD LLRDALLENI
Sbjct 125 MQPIVVRRL---EPGVDKYQLVMGERRWRACQEAGLEAIPAIVRETADDALLRDALLENI 181
Query 156 HRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGV 215
HRVQLNPLEEAAAYQQLL+EFGVTH+ELAARIGRSRP++TNMIRLLKLPIPVQRRVAAGV
Sbjct 182 HRVQLNPLEEAAAYQQLLEEFGVTHEELAARIGRSRPVVTNMIRLLKLPIPVQRRVAAGV 241
Query 216 LSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPA 275
LSAGHARALL LEAGP+AQE LA+RIVAEG+SVRATEE VTLAN E + A TP
Sbjct 242 LSAGHARALLGLEAGPDAQEALAARIVAEGMSVRATEEAVTLANREPD------SAATPP 295
Query 276 PPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVG 328
P+RKPI MPGLQDVAE+LS +FDTRVTVSLGKRKGKIVVEFGSV+DL RIVG
Sbjct 296 APKRKPIHMPGLQDVAEKLSNSFDTRVTVSLGKRKGKIVVEFGSVEDLERIVG 348
>gi|15808976|gb|AAL08578.1|AF418548_4 ParA [Mycobacterium avium subsp. paratuberculosis]
Length=264
Score = 456 bits (1173), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 234/266 (88%), Positives = 243/266 (92%), Gaps = 8/266 (3%)
Query 65 PSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWR 124
P+ IE NPRQPRQVFDEEALAELVHSIREFGLLQPIVVR++ S +G RYQIVMGERRWR
Sbjct 2 PADIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMGERRWR 61
Query 125 AAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELA 184
AAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELA
Sbjct 62 AAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELA 121
Query 185 ARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASRIVAE 244
ARIGRSRPLITNMIRLLKLPI VQRRVAAGVLSAGHARALLSLEAGPEAQEELA+RIVAE
Sbjct 122 ARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELATRIVAE 181
Query 245 GLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDTRVTV 304
GLSVRATEE VTLAN + TTP PPRRKPIQMPGLQDVA+RLST FDTRVTV
Sbjct 182 GLSVRATEEAVTLAN--------RAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTV 233
Query 305 SLGKRKGKIVVEFGSVDDLARIVGLM 330
SLGKRKGKIVVEFGSVDDL RI+ +M
Sbjct 234 SLGKRKGKIVVEFGSVDDLQRIIDVM 259
>gi|343928727|ref|ZP_08768172.1| chromosome partitioning protein ParB [Gordonia alkanivorans NBRC
16433]
gi|343761476|dbj|GAA15098.1| chromosome partitioning protein ParB [Gordonia alkanivorans NBRC
16433]
Length=345
Score = 448 bits (1152), Expect = 6e-124, Method: Compositional matrix adjust.
Identities = 239/345 (70%), Positives = 271/345 (79%), Gaps = 29/345 (8%)
Query 5 SRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIG-GPVP------------ 51
++R+GGLGRGLAALIPTGP + +S PR+G+A ADVVIG GP P
Sbjct 7 AQRRGGLGRGLAALIPTGPTEDQSS----APRLGNAAADVVIGKGPSPAVDGHSSPAGAS 62
Query 52 -----DTSVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLA 106
GA+YREIPP I+ NP QPR VFD+E ++ELVHSIREFGL+QPIVVR L
Sbjct 63 AVDVLSREEAGAVYREIPPKQIQPNPNQPRTVFDDEQMSELVHSIREFGLMQPIVVRRLK 122
Query 107 G-SQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEE 165
+ GV YQIVMGERRWRA+QE GL IPAIVRET D ++LRDALLENIHR QLNPLEE
Sbjct 123 EPTADGVAYQIVMGERRWRASQEVGLEAIPAIVRETADGDMLRDALLENIHRAQLNPLEE 182
Query 166 AAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALL 225
AAAYQQLL+EFGVTH++LAA++GRSRPLI+NMIRLLKLPIPVQRRVAAGVLSAGHARALL
Sbjct 183 AAAYQQLLEEFGVTHEQLAAKLGRSRPLISNMIRLLKLPIPVQRRVAAGVLSAGHARALL 242
Query 226 SLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMP 285
+LE G +AQE LA+RIVAEGLSVRATEE VTLAN +A PA P+RKP+QMP
Sbjct 243 ALETGSDAQEALAARIVAEGLSVRATEEAVTLANRGDGPEAK------PAAPKRKPMQMP 296
Query 286 GLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
GLQD+AERLS + DTRVTVSLGKRKGKIVVEFGSVDDL RIV +
Sbjct 297 GLQDLAERLSDSLDTRVTVSLGKRKGKIVVEFGSVDDLERIVQFI 341
>gi|262204655|ref|YP_003275863.1| parB-like partition protein [Gordonia bronchialis DSM 43247]
gi|262088002|gb|ACY23970.1| parB-like partition protein [Gordonia bronchialis DSM 43247]
Length=391
Score = 447 bits (1149), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 251/380 (67%), Positives = 284/380 (75%), Gaps = 58/380 (15%)
Query 1 MTQPS-RRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIG------------ 47
+T+P+ +R+GGLGRGLAALIPTGP+D ++ T PRMGSA ADVVIG
Sbjct 16 VTKPAAQRRGGLGRGLAALIPTGPSDDQA---TGAPRMGSAAADVVIGKSSAAGSAPATG 72
Query 48 -----GPVPD-----TSV--------------------------MGAIYREIPPSAIEAN 71
G VP TSV +GA+YREIPP+ IE N
Sbjct 73 SAPATGSVPSAGPDGTSVHSSETGTGTATATIPAPATTPLPHDEVGAVYREIPPAQIEPN 132
Query 72 PRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAG-SQTGVRYQIVMGERRWRAAQEAG 130
P QPR VFDE+ALAELVHSI EFGL+QPIVVR L + GVR+Q+VMGERRWRA+QEAG
Sbjct 133 PNQPRTVFDEDALAELVHSITEFGLMQPIVVRELPEPTPEGVRFQLVMGERRWRASQEAG 192
Query 131 LATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRS 190
L IPAIVRET D ++LRDALLENIHR QLNPLEEAAAYQQLLDEFGVTH+ELAAR+GRS
Sbjct 193 LEAIPAIVRETPDGDMLRDALLENIHRAQLNPLEEAAAYQQLLDEFGVTHEELAARLGRS 252
Query 191 RPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRA 250
RPLI+NMIRLLKLPIPVQRRVAAGVLSAGHARALLSLE G +AQE LA+RIVAEGLSVRA
Sbjct 253 RPLISNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLETGSDAQEALAARIVAEGLSVRA 312
Query 251 TEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRK 310
TEE VTLAN + S +PA P+R+ +QMPGLQD+AERLS DTRVTV LGKRK
Sbjct 313 TEEAVTLANRD-----DGSGGRSPASPKRRQMQMPGLQDLAERLSDRLDTRVTVGLGKRK 367
Query 311 GKIVVEFGSVDDLARIVGLM 330
GKIVVEFGSV+DL RIVG++
Sbjct 368 GKIVVEFGSVEDLERIVGVI 387
>gi|229491225|ref|ZP_04385053.1| ParB-like partition protein [Rhodococcus erythropolis SK121]
gi|229321963|gb|EEN87756.1| ParB-like partition protein [Rhodococcus erythropolis SK121]
Length=346
Score = 444 bits (1141), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 244/357 (69%), Positives = 270/357 (76%), Gaps = 54/357 (15%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIG------------------- 47
RKGGLGRGLAALIPTGPA P +GSA ADVVIG
Sbjct 5 RKGGLGRGLAALIPTGPATA--------PGLGSAAADVVIGVDKRNPSPPPPTKAAPKTP 56
Query 48 ---------GPV---PDTSV--MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIRE 93
PV P+T + GA+Y EI PS IE NP+QPR VFDEEALAELVHSIRE
Sbjct 57 KATKASAAKAPVEAEPETELEPTGAVYLEIEPSLIETNPKQPRSVFDEEALAELVHSIRE 116
Query 94 FGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLE 153
FGL+QPIVVR + G +YQ+VMGERRWRA+QEAGL IPAI+RET DD++LRDALLE
Sbjct 117 FGLMQPIVVR-----RHGDKYQLVMGERRWRASQEAGLEKIPAIIRETDDDSMLRDALLE 171
Query 154 NIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAA 213
NIHRVQLNPLEEAAAYQQLL+EF VTH+ELA RIGRSRP++TNMIRLLKLP+ VQRRVAA
Sbjct 172 NIHRVQLNPLEEAAAYQQLLEEFEVTHEELANRIGRSRPVVTNMIRLLKLPVAVQRRVAA 231
Query 214 GVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATT 273
GVLSAGHARALLSLEAG +AQE +A+RIVAEG+SVRATEE VTLAN +D
Sbjct 232 GVLSAGHARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLAN--------RADNEI 283
Query 274 PAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
P +RKPI MPGLQDVAERLS +FDTRVTVSLGKRKGKIVVEFGSVDDL RIVG+M
Sbjct 284 APPQKRKPIVMPGLQDVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMM 340
>gi|226309509|ref|YP_002769471.1| chromosome partitioning protein ParB [Rhodococcus erythropolis
PR4]
gi|226188628|dbj|BAH36732.1| probable chromosome partitioning protein ParB [Rhodococcus erythropolis
PR4]
Length=346
Score = 442 bits (1136), Expect = 4e-122, Method: Compositional matrix adjust.
Identities = 241/357 (68%), Positives = 266/357 (75%), Gaps = 54/357 (15%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVM---------- 56
RKGGLGRGLAALIPTGPA P +GSA ADVVIG + S
Sbjct 5 RKGGLGRGLAALIPTGPATA--------PGLGSAAADVVIGVDKRNPSPPPPTKAAPKTP 56
Query 57 -----------------------GAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIRE 93
GA+Y EI PS IE NP+QPR VFDEEALAELVHSIRE
Sbjct 57 KATKATAAKAPVEAEAETELEPTGAVYLEIEPSLIETNPKQPRSVFDEEALAELVHSIRE 116
Query 94 FGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLE 153
FGL+QPIVVR + G +YQ+VMGERRWRA+QEAGL IPAI+RET DD++LRDALLE
Sbjct 117 FGLMQPIVVR-----RHGDKYQLVMGERRWRASQEAGLEKIPAIIRETDDDSMLRDALLE 171
Query 154 NIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAA 213
NIHRVQLNPLEEAAAYQQLL+EF VTH+ELA RIGRSRP++TNMIRLLKLP+ VQRRVAA
Sbjct 172 NIHRVQLNPLEEAAAYQQLLEEFEVTHEELANRIGRSRPVVTNMIRLLKLPVAVQRRVAA 231
Query 214 GVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATT 273
GVLSAGHARALLSLEAG +AQE +A+RIVAEG+SVRATEE VTLAN +D
Sbjct 232 GVLSAGHARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLAN--------RADNEI 283
Query 274 PAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
P +RKPI MPGLQDVAERLS +FDTRVTVSLGKRKGKIVVEFGSVDDL RIVG+M
Sbjct 284 APPQKRKPIVMPGLQDVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMM 340
>gi|111020643|ref|YP_703615.1| chromosome partitioning protein [Rhodococcus jostii RHA1]
gi|110820173|gb|ABG95457.1| probable chromosome partitioning protein [Rhodococcus jostii
RHA1]
Length=360
Score = 435 bits (1119), Expect = 5e-120, Method: Compositional matrix adjust.
Identities = 245/366 (67%), Positives = 271/366 (75%), Gaps = 47/366 (12%)
Query 7 RKGGLGRGLAALIP---------------------------TGPA--------DGESGPP 31
RKGGLGRGLAALIP T PA D ++ P
Sbjct 5 RKGGLGRGLAALIPTGPTTTGPGLGNAAADVVIGADRRTVLTAPATNASDSATDEKTAPA 64
Query 32 TLGPRMGSATADVVIG-GPVPDTSVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHS 90
+ G S AD G G P S GA+YREI P IE NP+QPRQVFD++ALAELVHS
Sbjct 65 STGNNGSSNGADGESGNGAQPLPSPTGAVYREIAPDLIERNPKQPRQVFDDDALAELVHS 124
Query 91 IREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDA 150
IREFGL+QPIVVR L ++Q+VMGERRWRA+QEA L TIPAIVRETGDD +LRDA
Sbjct 125 IREFGLMQPIVVRPLDDG----KFQLVMGERRWRASQEAELETIPAIVRETGDDAMLRDA 180
Query 151 LLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRR 210
LLENIHRVQLNPLEEAAAYQQLL+EF VTH+ELAA+IGRSRP++TNMIRLLKLPIPVQRR
Sbjct 181 LLENIHRVQLNPLEEAAAYQQLLEEFEVTHEELAAKIGRSRPVVTNMIRLLKLPIPVQRR 240
Query 211 VAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSD 270
VAAGVLSAGHARALLSLEAG +AQE +A+RIVAEG+SVRATEE VTLAN ++ A
Sbjct 241 VAAGVLSAGHARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLANRSDDQAAQ--- 297
Query 271 ATTPAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
PA RRKPIQMPGLQDVAERLS +FDTRVTVSLGKRKGKIVVEFGSVDDL RIVG+M
Sbjct 298 ---PA-QRRKPIQMPGLQDVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMM 353
Query 331 TTDGRD 336
D
Sbjct 354 EAQKAD 359
>gi|296141900|ref|YP_003649143.1| parB-like partition protein [Tsukamurella paurometabola DSM 20162]
gi|296030034|gb|ADG80804.1| parB-like partition protein [Tsukamurella paurometabola DSM 20162]
Length=341
Score = 434 bits (1115), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 232/353 (66%), Positives = 268/353 (76%), Gaps = 42/353 (11%)
Query 5 SRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIG----------------- 47
+++KGGLGRGLAALIPTGP +G PR+G+A ADVVIG
Sbjct 3 TQKKGGLGRGLAALIPTGPDEG--------PRLGNAAADVVIGAKPGKQAPSAKGTAAER 54
Query 48 ---------GPVPDTSVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQ 98
G P +GA+YRE+ PSAI+ NP+QPR VFDEEALAELVHSIREFGL+Q
Sbjct 55 ATGAGAASPGDAPSDDAVGAVYRELAPSAIQPNPQQPRSVFDEEALAELVHSIREFGLMQ 114
Query 99 PIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRV 158
PIVVR L Q VRYQ+VMGERRWRA+QEAGL TIP IVRET D ++LRDALLENIHRV
Sbjct 115 PIVVRPLPRPQGEVRYQLVMGERRWRASQEAGLETIPTIVRETADGDMLRDALLENIHRV 174
Query 159 QLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSA 218
QLNPLEEAAAYQQLL+EFGVTHDELAAR+GRSRP++TN IRLL+LP+ VQRRVAAGVLSA
Sbjct 175 QLNPLEEAAAYQQLLEEFGVTHDELAARLGRSRPVVTNTIRLLRLPVAVQRRVAAGVLSA 234
Query 219 GHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPR 278
GHARALL+LE G EAQE LA+RI+AEG+SVRATEE VTLAN + PAP R
Sbjct 235 GHARALLALEGGTEAQEALAARIIAEGMSVRATEEAVTLANRDGT-------VVPPAPKR 287
Query 279 RKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
R+ PGL+DVA+R++ DT+VTVS+GKRKGKIVVE GS DDL RIVGL++
Sbjct 288 RQEAD-PGLRDVADRIADRLDTKVTVSMGKRKGKIVVEVGSADDLERIVGLLS 339
>gi|226362886|ref|YP_002780666.1| chromosome partitioning protein ParB [Rhodococcus opacus B4]
gi|226241373|dbj|BAH51721.1| chromosome partitioning protein ParB [Rhodococcus opacus B4]
Length=359
Score = 431 bits (1107), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 244/367 (67%), Positives = 269/367 (74%), Gaps = 62/367 (16%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG--------PVPDTSV--- 55
RKGGLGRGLAALIPTGP +G+A ADVVIG P P++S
Sbjct 5 RKGGLGRGLAALIPTGPTTTGP-------GLGNAAADVVIGTDRRNVLTEPAPNSSDSAT 57
Query 56 --------------------------------MGAIYREIPPSAIEANPRQPRQVFDEEA 83
GA+YREI P IE NP+QPRQVFD++A
Sbjct 58 AKKTAPASTGNNGESNGADGASGNGAQPLPSPTGAVYREIAPDLIERNPKQPRQVFDDDA 117
Query 84 LAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGD 143
LAELVHSIREFGL+QPIVVR L ++Q+VMGERRWRA+QEA L TIPAIVRETGD
Sbjct 118 LAELVHSIREFGLMQPIVVRPLEDG----KFQLVMGERRWRASQEAELETIPAIVRETGD 173
Query 144 DNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKL 203
D +LRDALLENIHRVQLNPLEEAAAYQQLL+EF VTH+ELAA+IGRSRP++TNMIRLLKL
Sbjct 174 DAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFEVTHEELAAKIGRSRPVVTNMIRLLKL 233
Query 204 PIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEAN 263
PIPVQRRVAAGVLSAGHARALLSLEAG +AQE +A+RIVAEG+SVRATEE VTLAN
Sbjct 234 PIPVQRRVAAGVLSAGHARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLAN---- 289
Query 264 RQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDL 323
SD RRKPIQMPGLQDVAERLS +FDTRVTVSLGKRKGKIVVEFGSVDDL
Sbjct 290 ----RSDDQAQPVQRRKPIQMPGLQDVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDL 345
Query 324 ARIVGLM 330
RIVG+M
Sbjct 346 QRIVGMM 352
>gi|325677532|ref|ZP_08157196.1| chromosome partition ParA protein [Rhodococcus equi ATCC 33707]
gi|325551779|gb|EGD21477.1| chromosome partition ParA protein [Rhodococcus equi ATCC 33707]
Length=383
Score = 427 bits (1098), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 243/386 (63%), Positives = 267/386 (70%), Gaps = 75/386 (19%)
Query 7 RKGGLGRGLAALIPTGPAD--------------GESGPPTLGPRMGSATA---------- 42
RKGGLGRGLAALIPTGPA G S P T + +A
Sbjct 5 RKGGLGRGLAALIPTGPAGSGPGLGTAAADVIIGTSAPTTDAAAVETAADTAVETEAPAK 64
Query 43 ----------------------------DVVIGGPVPDTSV---------MGAIYREIPP 65
DVV P P +V GA+Y EIPP
Sbjct 65 ASKPAKKAPAKAPAKAASKTAAKAASSDDVVATAPTPAPAVRTDGEPLSPTGAVYHEIPP 124
Query 66 SAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRA 125
I+ NP+QPR VFDEEAL ELVHSIREFGL+QPIVVR + Q YQ+VMGERRWRA
Sbjct 125 LQIQPNPKQPRSVFDEEALGELVHSIREFGLMQPIVVRRIGPEQ----YQLVMGERRWRA 180
Query 126 AQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAA 185
+Q AGL TIPAIVRET DD++LRDALLENIHRVQLNPLEEAAAYQQLL+EF VTH+ELA+
Sbjct 181 SQLAGLETIPAIVRETTDDSMLRDALLENIHRVQLNPLEEAAAYQQLLEEFEVTHEELAS 240
Query 186 RIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASRIVAEG 245
RIGRSRP++TNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAG +AQE LA+RIVAEG
Sbjct 241 RIGRSRPVVTNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGADAQEVLAARIVAEG 300
Query 246 LSVRATEETVTLANHEANRQAHHSDATTPAPP-RRKPIQMPGLQDVAERLSTTFDTRVTV 304
+SVRATEE V LAN E +P PP +RKPIQMPGLQDVAERLS +FDTRVTV
Sbjct 301 MSVRATEEAVMLANRE---------GPSPTPPVKRKPIQMPGLQDVAERLSNSFDTRVTV 351
Query 305 SLGKRKGKIVVEFGSVDDLARIVGLM 330
SLGKRKGKI VEFGSVDDL RIV +M
Sbjct 352 SLGKRKGKITVEFGSVDDLERIVKMM 377
>gi|312142020|ref|YP_004009356.1| chromosome partitioning protein parb [Rhodococcus equi 103S]
gi|311891359|emb|CBH50680.1| chromosome partitioning protein ParB [Rhodococcus equi 103S]
Length=383
Score = 418 bits (1074), Expect = 7e-115, Method: Compositional matrix adjust.
Identities = 220/298 (74%), Positives = 242/298 (82%), Gaps = 23/298 (7%)
Query 43 DVVIGGPVPDTSV---------MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIRE 93
DVV P P +V GA+Y EIPP I+ NP+QPR VFDEEAL ELVHSIRE
Sbjct 93 DVVATAPTPAPAVRTDGEPLSPTGAVYHEIPPLQIQPNPKQPRSVFDEEALGELVHSIRE 152
Query 94 FGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLE 153
FGL+QPIVVR + Q YQ+VMGERRWRA+Q AGL TIPAIVRET DD++LRDALLE
Sbjct 153 FGLMQPIVVRRIGPEQ----YQLVMGERRWRASQLAGLETIPAIVRETTDDSMLRDALLE 208
Query 154 NIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAA 213
NIHRVQLNPLEEAAAYQQLL+EF VTH+ELA+RIGRSRP++TNMIRLLKLPIPVQRRVAA
Sbjct 209 NIHRVQLNPLEEAAAYQQLLEEFEVTHEELASRIGRSRPVVTNMIRLLKLPIPVQRRVAA 268
Query 214 GVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATT 273
GVLSAGHARALLSLEAG +AQE LA+RIVAEG+SVRATEE V LAN E +
Sbjct 269 GVLSAGHARALLSLEAGADAQEVLAARIVAEGMSVRATEEAVMLANRE---------GPS 319
Query 274 PAPP-RRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
P PP +RKPIQMPGLQDVAERLS +FDTRVTVSLGKRKGKI VEFGSVDDL RIV +M
Sbjct 320 PTPPVKRKPIQMPGLQDVAERLSNSFDTRVTVSLGKRKGKITVEFGSVDDLERIVKMM 377
>gi|257057909|ref|YP_003135741.1| chromosome segregation DNA-binding protein [Saccharomonospora
viridis DSM 43017]
gi|256587781|gb|ACU98914.1| chromosome segregation DNA-binding protein [Saccharomonospora
viridis DSM 43017]
Length=328
Score = 412 bits (1058), Expect = 5e-113, Method: Compositional matrix adjust.
Identities = 223/338 (66%), Positives = 258/338 (77%), Gaps = 18/338 (5%)
Query 5 SRRKGGLGRGLAALIPTGPAD-----GESGPPTLGPRMGSATADVVIGGPVPDTSVMGAI 59
S RKGGLGRGLAALIPTGP + GE +G R + V V GA+
Sbjct 2 SERKGGLGRGLAALIPTGPINTERGRGEGASSAVGVRGVPGSFAVSGASQEHGGEVAGAV 61
Query 60 YREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMG 119
YREIP A++ NP+QPRQVFD+EALAEL HSIREFGL+QPIVVR L+ + Y++VMG
Sbjct 62 YREIPVEAVKPNPKQPRQVFDQEALAELEHSIREFGLMQPIVVRRLSADE----YELVMG 117
Query 120 ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 179
ERR RAAQ+AGL IPAIVR T DD +LRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT
Sbjct 118 ERRLRAAQQAGLKNIPAIVRNTSDDAMLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 177
Query 180 HDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELAS 239
H+ELAARIGRSRP+ITN IRLL+LP+PVQRRVAAGVLSAGHARALLSL+ P+ QEELA
Sbjct 178 HEELAARIGRSRPVITNTIRLLRLPLPVQRRVAAGVLSAGHARALLSLD-DPDQQEELAG 236
Query 240 RIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFD 299
RIVAEGLSVRATEE VTLA E+ + + RKP+Q PG++ +AERLS FD
Sbjct 237 RIVAEGLSVRATEEAVTLAKSESKPKQRKAA--------RKPVQAPGVEALAERLSDAFD 288
Query 300 TRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDK 337
TRV V +G+RKG+IVVEFGS++DL RIV LMT + +K
Sbjct 289 TRVKVDVGRRKGRIVVEFGSLEDLERIVALMTPNSTNK 326
>gi|333922230|ref|YP_004495811.1| putative chromosome partitioning protein ParB [Amycolicicoccus
subflavus DQS3-9A1]
gi|333484451|gb|AEF43011.1| putative chromosome partitioning protein ParB [Amycolicicoccus
subflavus DQS3-9A1]
Length=346
Score = 404 bits (1038), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 224/362 (62%), Positives = 260/362 (72%), Gaps = 53/362 (14%)
Query 5 SRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG---------------- 48
+R +GGLGRGLAALIPTGP T P++G+A ADV+IGG
Sbjct 4 NRNRGGLGRGLAALIPTGP--------TNAPQLGNAAADVIIGGEHRTSAPSRPGSGEYE 55
Query 49 ---------PVPDTSV--------MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSI 91
P P +V + A+YRE+ P IE NPRQPRQVFD+EA EL+HSI
Sbjct 56 ASTTRVTSVPKPTAAVSRETRTTEIAAVYRELDPRLIEPNPRQPRQVFDDEAEHELIHSI 115
Query 92 REFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDAL 151
REFG++QPIVVR + G RYQ+VMGERRWRA G+ ++PAIVR T DD LLRDAL
Sbjct 116 REFGMMQPIVVREI-----GDRYQLVMGERRWRACTALGMESVPAIVRATTDDALLRDAL 170
Query 152 LENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRV 211
LENIHRVQLNPLEEAAAYQQLL+EFGVTHDELAARIGRSRP++TNMIRLL+LPI VQRRV
Sbjct 171 LENIHRVQLNPLEEAAAYQQLLEEFGVTHDELAARIGRSRPVVTNMIRLLRLPIAVQRRV 230
Query 212 AAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDA 271
AAGVLSAGHARALL L+ G AQEELA+RIVAEG+SVRATEE VTL NR+ +A
Sbjct 231 AAGVLSAGHARALLGLDGGAGAQEELAARIVAEGMSVRATEEAVTL----MNRRNGTPNA 286
Query 272 TTPAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
P ++P P L D+A +LS FDT+VTVSLGKRKGKIVVEFG+VDDL RIV LM
Sbjct 287 AAERPKVQQP---PELGDLATQLSDNFDTKVTVSLGKRKGKIVVEFGNVDDLQRIVSLMQ 343
Query 332 TD 333
++
Sbjct 344 SE 345
>gi|326383901|ref|ZP_08205585.1| parB-like partition protein [Gordonia neofelifaecis NRRL B-59395]
gi|326197360|gb|EGD54550.1| parB-like partition protein [Gordonia neofelifaecis NRRL B-59395]
Length=349
Score = 403 bits (1035), Expect = 3e-110, Method: Compositional matrix adjust.
Identities = 221/355 (63%), Positives = 254/355 (72%), Gaps = 48/355 (13%)
Query 18 LIPTGPADGESGPPTLGPRMGSATADVVIGG----------PVPDTSVM----------- 56
+IPTGP+D + G T RMGSA ADVVIGG P T ++
Sbjct 1 MIPTGPSDDDHGVNTT--RMGSAAADVVIGGGPAKPSTDGKSAPSTDLLAPTTGQEPTES 58
Query 57 -----------------GAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQP 99
GA+YREI P+ IE NP+QPR VFDEEAL EL HSIREFGL+QP
Sbjct 59 ERTEVAAVDAASASEEIGAVYREISPADIEPNPKQPRTVFDEEALFELEHSIREFGLMQP 118
Query 100 IVVRSL-AGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRV 158
IVVR L + G YQ++MGERRWRA GL TIPAIVRET D +LLRDALLENIHR
Sbjct 119 IVVRELPSPGAGGAHYQLIMGERRWRAGTNVGLETIPAIVRETPDGDLLRDALLENIHRA 178
Query 159 QLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSA 218
QLNPLEEAAAYQQLL+EF VTH+ELA R+GRSRP+ITNMIRLLKLPIPVQRRVAAGVLSA
Sbjct 179 QLNPLEEAAAYQQLLEEFEVTHEELATRLGRSRPVITNMIRLLKLPIPVQRRVAAGVLSA 238
Query 219 GHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPR 278
GHARALL+LEAG +AQE LA+RIVAEGLSVRATEE VTLAN + + P +
Sbjct 239 GHARALLALEAGTDAQEALAARIVAEGLSVRATEEAVTLANRDGFEE-------KPEQKK 291
Query 279 RKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTD 333
R+PI+MPGLQDVA RLS DT+VTVSLGK+KG++ +EFGSVDDL RIV ++ +
Sbjct 292 RRPIEMPGLQDVANRLSDRLDTKVTVSLGKKKGRVSIEFGSVDDLERIVNVIAEN 346
>gi|300791158|ref|YP_003771449.1| chromosome partitioning protein ParB [Amycolatopsis mediterranei
U32]
gi|299800672|gb|ADJ51047.1| chromosome partitioning protein ParB [Amycolatopsis mediterranei
U32]
gi|340532858|gb|AEK48063.1| chromosome partitioning protein ParB [Amycolatopsis mediterranei
S699]
Length=333
Score = 399 bits (1025), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 220/342 (65%), Positives = 254/342 (75%), Gaps = 24/342 (7%)
Query 5 SRRKGGLGRGLAALIPTGPADGESGP-PTLGPRMGSATADVVIGGPVPDT--------SV 55
+ R+GGLGRGLAALIPTGP G GP P G + G V
Sbjct 2 TERRGGLGRGLAALIPTGPTGG--GPLPAPGDTTAADKKAAEDKGWFAANGQAQQHAGEV 59
Query 56 MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQ 115
GA+YREIP S+I+ NP+QPRQVFDEEALAEL HSIR FGL+QPIVVR L + Y+
Sbjct 60 AGAVYREIPVSSIKPNPKQPRQVFDEEALAELEHSIRAFGLMQPIVVRELGNDE----YE 115
Query 116 IVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDE 175
+VMGERR RA+Q+A L IPAIVR+T D+++LRDALLENIHRVQLNPLEEAAAYQQLLDE
Sbjct 116 LVMGERRLRASQQAELEAIPAIVRQTADESMLRDALLENIHRVQLNPLEEAAAYQQLLDE 175
Query 176 FGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQE 235
F VTH+ELA+RIGRSRP+ITN IRLLKLP+PVQRRVAAGVLSAGHARALLSLE E+QE
Sbjct 176 FAVTHEELASRIGRSRPVITNTIRLLKLPLPVQRRVAAGVLSAGHARALLSLEDA-ESQE 234
Query 236 ELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLS 295
ELA+RIVAEG+SVRATEE VTL E P P RKPIQ PGLQ++A RLS
Sbjct 235 ELAARIVAEGMSVRATEEAVTLKKSE--------KPAKPKPAPRKPIQAPGLQELANRLS 286
Query 296 TTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDK 337
FDTRV V LG+RKG+I +EFGSVDDL RIV ++ +G ++
Sbjct 287 DRFDTRVKVDLGRRKGRITLEFGSVDDLERIVAIIDANGANQ 328
>gi|302531350|ref|ZP_07283692.1| chromosome partitioning [Streptomyces sp. AA4]
gi|302440245|gb|EFL12061.1| chromosome partitioning [Streptomyces sp. AA4]
Length=338
Score = 390 bits (1003), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 221/341 (65%), Positives = 257/341 (76%), Gaps = 21/341 (6%)
Query 5 SRRKGGLGRGLAALIPTGPADGE--------SGPPTLGPRMGSATADVVIGGPVPDTSVM 56
+ R+GGLGRGLAALIPTGPA S G A+ G V V
Sbjct 2 TERRGGLGRGLAALIPTGPATPPPAATEAVTSADKAAREDKGWFAANGAAGQQVAGGEVA 61
Query 57 GAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQI 116
GA+YREIP S+++ NP+QPRQVFDEEALAEL HSIREFGL+QPIVVR L + Y++
Sbjct 62 GAVYREIPVSSVKPNPKQPRQVFDEEALAELEHSIREFGLMQPIVVRELGEDE----YEL 117
Query 117 VMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEF 176
VMGERR RA+Q+A L IPAIVR+T D+++LRDALLENIHRVQLNPLEEAAAYQQLLDEF
Sbjct 118 VMGERRLRASQQAELEAIPAIVRQTADESMLRDALLENIHRVQLNPLEEAAAYQQLLDEF 177
Query 177 GVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEE 236
VTH+ELA RIGRSRP+ITN IRLLKLP+PVQRRVAAGVLSAGHARALLSLE P++QEE
Sbjct 178 AVTHEELAGRIGRSRPVITNTIRLLKLPLPVQRRVAAGVLSAGHARALLSLE-DPDSQEE 236
Query 237 LASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLST 296
LA+RIVAEG+SVRATEE VTL ++ AP RKPIQ PGLQ++A RLS
Sbjct 237 LAARIVAEGMSVRATEEAVTLK------KSEKPPKPKAAP--RKPIQAPGLQELANRLSD 288
Query 297 TFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDK 337
FDTRV V LG+RKG+IV+EFGSVDDL RIVG++ + +K
Sbjct 289 RFDTRVKVDLGRRKGRIVLEFGSVDDLERIVGIIDANSGEK 329
>gi|256381068|ref|YP_003104728.1| parB-like partition protein [Actinosynnema mirum DSM 43827]
gi|255925371|gb|ACU40882.1| parB-like partition protein [Actinosynnema mirum DSM 43827]
Length=331
Score = 381 bits (979), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 215/337 (64%), Positives = 253/337 (76%), Gaps = 19/337 (5%)
Query 6 RRKGGLGRGLAALIPTGPADGES----GPPTLGPRMGSATADVVIGGPVPDTSVMGAIYR 61
+RKGGLGRGLAALIP+GP G P+ P + P V GA+Y+
Sbjct 4 QRKGGLGRGLAALIPSGPPPGAPAPLRSVPSGAP--ARPATEEPPAAAPPPVEVAGAVYQ 61
Query 62 EIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGER 121
E+P ++I NP+QPR VFDE+AL EL HSIREFGL+QPIVVR L + Y++VMGER
Sbjct 62 ELPVTSIRTNPKQPRHVFDEDALHELEHSIREFGLMQPIVVRMLKPGE----YELVMGER 117
Query 122 RWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHD 181
RWRA Q AGL TIPAIVR+T DD +LRDALLENIHRVQLNPLEEAAAYQQLL EF VTH+
Sbjct 118 RWRATQLAGLKTIPAIVRQTADDAMLRDALLENIHRVQLNPLEEAAAYQQLLQEFDVTHE 177
Query 182 ELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASRI 241
ELA RIGRSRP++TN IRLLKLP+PVQRRVAAGVLSAGHARALL L+ P AQE+LA+RI
Sbjct 178 ELAERIGRSRPVVTNTIRLLKLPLPVQRRVAAGVLSAGHARALLGLD-DPGAQEDLATRI 236
Query 242 VAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDTR 301
VAEG+SVRATEE V LA ++ T +RKP++ PGLQ++AERLS FDTR
Sbjct 237 VAEGMSVRATEEAVVLAR--------GAEPTKAKQAKRKPVEAPGLQELAERLSDNFDTR 288
Query 302 VTVSLGKRKGKIVVEFGSVDDLARIVGLMTTDGRDKG 338
V V LG+RKG+IVVEFGSVDDL RI+GLM+ +G +G
Sbjct 289 VKVELGQRKGRIVVEFGSVDDLERIIGLMSPEGAHQG 325
>gi|331700387|ref|YP_004336626.1| parB-like partition protein [Pseudonocardia dioxanivorans CB1190]
gi|326955076|gb|AEA28773.1| parB-like partition protein [Pseudonocardia dioxanivorans CB1190]
Length=320
Score = 380 bits (976), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 220/334 (66%), Positives = 250/334 (75%), Gaps = 27/334 (8%)
Query 5 SRRKGGLGRGLAALIPTGP-ADGESGPPTLG--PRMGSATADVV-IGGPVPDTSVMGAIY 60
+ RKGGLGRGLAALIPTGP A E G PT P S+ + P+P V GA Y
Sbjct 2 AERKGGLGRGLAALIPTGPPAPAEPGTPTAANVPTSWSSRPPAPPVDEPMP---VAGATY 58
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGV-RYQIVMG 119
RE+ AIE NP+QPR FD+EALAEL HSIREFGLLQP+VVR +TG R+Q++MG
Sbjct 59 REVDVDAIEPNPKQPRTAFDDEALAELEHSIREFGLLQPVVVR-----ETGPGRFQLIMG 113
Query 120 ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 179
ERRWRA+Q AGL IPAIVR T DD LLRDALLENIHRVQLNPLEEAAAY+QLL EFGVT
Sbjct 114 ERRWRASQRAGLDRIPAIVRSTADDALLRDALLENIHRVQLNPLEEAAAYEQLLAEFGVT 173
Query 180 HDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELAS 239
H ELA RIGRSRP++TNMIRLL+LP+ VQRRVAAGVL+AGHARALL L+ P+ QEELA+
Sbjct 174 HSELADRIGRSRPVVTNMIRLLRLPVAVQRRVAAGVLTAGHARALLGLD-DPDRQEELAA 232
Query 240 RIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPR--RKPIQMPGLQDVAERLSTT 297
RIVAEG+SVRATEE V LA +E TPAP R RK I PG + +AERL+
Sbjct 233 RIVAEGMSVRATEEAVVLARNE-----------TPAPVRKKRKTIHAPGAERLAERLADR 281
Query 298 FDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMT 331
FDTRV V LG+RKG+IVVEFGSV+DL RI LM
Sbjct 282 FDTRVRVELGQRKGRIVVEFGSVEDLERIADLMN 315
>gi|324999874|ref|ZP_08120986.1| parB-like partition protein [Pseudonocardia sp. P1]
Length=323
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/332 (64%), Positives = 240/332 (73%), Gaps = 26/332 (7%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLG-------PRMGSATADVVIGGPVPDTSVMGAI 59
RKGGLGRGLAALIPTGPA+G P + G P D PV D GA
Sbjct 4 RKGGLGRGLAALIPTGPAEGGEQPGSNGAGAPLHRPAPAVQREDAETETPVVDG---GAE 60
Query 60 YREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMG 119
YREIP I NP+QPR FD+E L EL HSIREFGLLQPIVVR ++G Y+++MG
Sbjct 61 YREIPLKRIVPNPKQPRTQFDDEQLGELEHSIREFGLLQPIVVR-----RSGRDYELIMG 115
Query 120 ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT 179
ERRWRAAQ AGL T+PAIVR T DD +LRDALLENIHRVQLNPLEEAAAY+QLL EFGVT
Sbjct 116 ERRWRAAQRAGLDTLPAIVRHTADDVMLRDALLENIHRVQLNPLEEAAAYEQLLGEFGVT 175
Query 180 HDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLE-AGPEAQEELA 238
H ELA R+GRSRP++TNMIRLLKLP+ VQRRVAAGVLSAGHARALL LE AG QE+LA
Sbjct 176 HSELADRLGRSRPVVTNMIRLLKLPVTVQRRVAAGVLSAGHARALLGLEDAG--RQEDLA 233
Query 239 SRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTF 298
+RIVAEGLSVRATEE V LA + + + R++ Q P + A+RLS F
Sbjct 234 TRIVAEGLSVRATEEAVVLARQDGPPRERRA--------RKRGEQRPEFTERADRLSDRF 285
Query 299 DTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
DTRV V +G+RKG+IVVEFGSV+DL RI G+M
Sbjct 286 DTRVKVEMGQRKGRIVVEFGSVEDLDRITGMM 317
>gi|300780165|ref|ZP_07090021.1| plasmid partition ParA protein [Corynebacterium genitalium ATCC
33030]
gi|300534275|gb|EFK55334.1| plasmid partition ParA protein [Corynebacterium genitalium ATCC
33030]
Length=336
Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 206/351 (59%), Positives = 249/351 (71%), Gaps = 44/351 (12%)
Query 3 QPSRR-KGGLGRGLAALIPTGPAD--GESGPPTLGPRMGSATADVVIG------------ 47
QP + KGGLG+GLAALIP+ AD ++GP +G ADV+IG
Sbjct 4 QPKKNNKGGLGKGLAALIPSN-ADHHQKTGP------LGDGAADVIIGKKDAPKRLKGAP 56
Query 48 ---GPVPDTSV----MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPI 100
PV T+ +GA Y+EIP I N +QPR VFDE+ LAELVHSI+EFGLLQP+
Sbjct 57 SIPAPVAPTATVADSIGASYQEIPIGDIFPNAKQPRSVFDEDELAELVHSIKEFGLLQPV 116
Query 101 VVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQL 160
VVR A ++++MGERRWRA +AGL IPAIVR+T D+++LRDALLENIHRVQL
Sbjct 117 VVRPAADG-----FELIMGERRWRAGSKAGLKRIPAIVRDTSDEDMLRDALLENIHRVQL 171
Query 161 NPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGH 220
NPLEEAAAYQQLL+EFGVT ++LA R+GRSRP+ITN IRLL LP+PVQRRVAAGVLSAGH
Sbjct 172 NPLEEAAAYQQLLEEFGVTQEQLADRLGRSRPVITNSIRLLNLPVPVQRRVAAGVLSAGH 231
Query 221 ARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRK 280
ARALL ++ GPEAQE+LA RIVAEGLSVRATEE VTL N + P +R+
Sbjct 232 ARALLGVKVGPEAQEQLADRIVAEGLSVRATEEAVTLLN---------KNGAMPEKTKRE 282
Query 281 PIQMPG-LQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
P P L AERL+ +DT+V+V++GKRKGKIVVEFG DD RI+GL+
Sbjct 283 PAPQPEFLSQAAERLADEWDTKVSVTMGKRKGKIVVEFGDRDDFERIMGLI 333
>gi|311741706|ref|ZP_07715528.1| chromosome partitioning protein SpoOJ [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303227|gb|EFQ79308.1| chromosome partitioning protein SpoOJ [Corynebacterium pseudogenitalium
ATCC 33035]
Length=346
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/357 (57%), Positives = 247/357 (70%), Gaps = 50/357 (14%)
Query 6 RRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPD------------- 52
+++GGLG+GLAALIP+GP PT PR+G + AD+++G P
Sbjct 4 QKQGGLGKGLAALIPSGP-----DAPTRKPRLGDSAADIILGNSTPQPGRKGGEGKRVKG 58
Query 53 -------------------TSVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIRE 93
+ +GA YREI I NP+QPR VFDE+ L ELVHSIRE
Sbjct 59 APTIQQGSGSKSSKKRQATPAPIGATYREISIGDIIPNPKQPRTVFDEDELGELVHSIRE 118
Query 94 FGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLE 153
FGLLQP+VVR S+ G ++++MGERRWRA+ +AGLATIPAIVR+T DDNLLRDALLE
Sbjct 119 FGLLQPVVVRP---SEEG-GFELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLE 174
Query 154 NIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAA 213
NIHRVQLNPLEEA AYQQLL+EFGVT +ELA RIGRSRP +TNM+RLLKLP+ VQ+RVAA
Sbjct 175 NIHRVQLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLKLPVEVQKRVAA 234
Query 214 GVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATT 273
G LSAGHARALLSL+ EA E +A+RI+AEGLSVRATEE VTL ++ + + S
Sbjct 235 GTLSAGHARALLSLD-DTEAMEYIANRIIAEGLSVRATEEAVTL--YKRDGKPAESKKKQ 291
Query 274 PAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
PAP Q D AERLS FDT+VTV++GKRKGK+VVEFG +D RI+ L+
Sbjct 292 PAP------QPQYFTDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALI 342
>gi|306834792|ref|ZP_07467856.1| ParB family protein [Corynebacterium accolens ATCC 49726]
gi|304569320|gb|EFM44821.1| ParB family protein [Corynebacterium accolens ATCC 49726]
Length=346
Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/360 (55%), Positives = 244/360 (68%), Gaps = 50/360 (13%)
Query 6 RRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDT------------ 53
+++GGLG+GLAALIP+GP PT PR+G + AD+++G ++
Sbjct 4 QKQGGLGKGLAALIPSGP-----DAPTRKPRLGDSAADIILGNSTSNSERKARGEKRVKG 58
Query 54 --------------------SVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIRE 93
+ +GA YREI I NP+QPR VFDE+ L+ELVHSIRE
Sbjct 59 APTIQQGSGSNSSKKRQATPAAIGATYREISVGEIVPNPKQPRTVFDEDELSELVHSIRE 118
Query 94 FGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLE 153
FGLLQP+VVR S+ G ++++MGERRWRA+ +AGLATIPAIVR+T DDNLLRDALLE
Sbjct 119 FGLLQPVVVRP---SEEGG-FELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLE 174
Query 154 NIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAA 213
NIHRVQLNPLEEA AYQQLL+EFGVT +ELA RIGRSRP +TNM+RLL+LP+ VQ+RVAA
Sbjct 175 NIHRVQLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLRLPVDVQKRVAA 234
Query 214 GVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATT 273
G LSAGHARA+L L+ EA + +A R+++EGLSVRATEE VTL + + +
Sbjct 235 GTLSAGHARAILGLD-DKEAMDYIADRVISEGLSVRATEEAVTLYKRDGKPAENKKKSQV 293
Query 274 PAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTD 333
P P D AERLS FDT+VTV++GKRKGK+VVEFG +D RI+ LM D
Sbjct 294 PQP--------QFFTDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALMERD 345
>gi|255324014|ref|ZP_05365139.1| ParB-like partition protein [Corynebacterium tuberculostearicum
SK141]
gi|255298871|gb|EET78163.1| ParB-like partition protein [Corynebacterium tuberculostearicum
SK141]
Length=346
Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 203/357 (57%), Positives = 247/357 (70%), Gaps = 50/357 (14%)
Query 6 RRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPD------------- 52
+++GGLG+GLAALIP+GP PT PR+G + AD+++G P
Sbjct 4 QKQGGLGKGLAALIPSGP-----DAPTRKPRLGDSAADIILGNSTPQPGRKGGEGKRVKG 58
Query 53 -------------------TSVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIRE 93
+ +GA YREI I NP+QPR VFDE+ L ELVHSIRE
Sbjct 59 APTIQQGSGSKSSKKRQATPAPIGATYREISIGDIIPNPKQPRTVFDEDELGELVHSIRE 118
Query 94 FGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLE 153
FGLLQP+VVR S+ G ++++MGERRWRA+ +AGLATIPAIVR+T DDNLLRDALLE
Sbjct 119 FGLLQPVVVRP---SEEG-GFELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLE 174
Query 154 NIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAA 213
NIHRVQLNPLEEA AYQQLL+EFGVT +ELA RIGRSRP +TNM+RLLKLP+ VQ+RVAA
Sbjct 175 NIHRVQLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLKLPVEVQKRVAA 234
Query 214 GVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATT 273
G LSAGHARALLSL+ EA E +A+RI+AEGLSVRATEE VTL ++ + + S
Sbjct 235 GTLSAGHARALLSLD-DTEAMEYIANRIIAEGLSVRATEEAVTL--YKRDGKPAESKKKQ 291
Query 274 PAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
PAP Q D AERLS FDT+VTV++GKRKGK+VVEFG +D RI+ L+
Sbjct 292 PAP------QPQYFTDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALI 342
>gi|227502234|ref|ZP_03932283.1| stage 0 DNA-binding protein [Corynebacterium accolens ATCC 49725]
gi|227077058|gb|EEI15021.1| stage 0 DNA-binding protein [Corynebacterium accolens ATCC 49725]
Length=346
Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/360 (55%), Positives = 244/360 (68%), Gaps = 50/360 (13%)
Query 6 RRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDT------------ 53
+++GGLG+GLAALIP+GP PT PR+G + AD+++G ++
Sbjct 4 QKQGGLGKGLAALIPSGP-----DAPTRKPRLGDSAADIILGNSTGNSERKARGEKRVKG 58
Query 54 --------------------SVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIRE 93
+ +GA YREI I NP+QPR VFDE+ L+ELVHSIRE
Sbjct 59 APTIQQGSGSKSSKKRQATPAAIGATYREISVGEIVPNPKQPRTVFDEDELSELVHSIRE 118
Query 94 FGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLE 153
FGLLQP+VVR S+ G ++++MGERRWRA+ +AGLATIPAIVR+T DDNLLRDALLE
Sbjct 119 FGLLQPVVVRP---SEEGG-FELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLE 174
Query 154 NIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAA 213
NIHRVQLNPLEEA AYQQLL+EFGVT +ELA RIGRSRP +TNM+RLL+LP+ VQ+RVAA
Sbjct 175 NIHRVQLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLRLPVDVQKRVAA 234
Query 214 GVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATT 273
G LSAGHARA+L L+ EA + +A R+++EGLSVRATEE VTL + + +
Sbjct 235 GTLSAGHARAILGLD-DKEAMDYIADRVISEGLSVRATEEAVTLYKRDGKPAENKKKSQV 293
Query 274 PAPPRRKPIQMPGLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTD 333
P P D AERLS FDT+VTV++GKRKGK+VVEFG +D RI+ LM D
Sbjct 294 PQP--------QFFTDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALMERD 345
>gi|319949439|ref|ZP_08023500.1| parB-like partition protein [Dietzia cinnamea P4]
gi|319436901|gb|EFV91960.1| parB-like partition protein [Dietzia cinnamea P4]
Length=390
Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/274 (69%), Positives = 220/274 (81%), Gaps = 9/274 (3%)
Query 57 GAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQI 116
GA+YREI PS I+ NP+QPR FDEEALAEL HS++EFGLLQPIVVR ++G RYQ+
Sbjct 117 GAVYREISPSDIDPNPKQPRTYFDEEALAELAHSVKEFGLLQPIVVREMSGG----RYQL 172
Query 117 VMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEF 176
+MGERRWRA+Q A LATIPAIVR+T D++LLRDALLENIHRVQLNPLEEAAAYQQLLDEF
Sbjct 173 IMGERRWRASQRAELATIPAIVRQTEDEDLLRDALLENIHRVQLNPLEEAAAYQQLLDEF 232
Query 177 GVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEE 236
VT ELA RIGRSRP ITN IRLL+LP VQRRVAAGVLSAGHARALL LEAG AQ+E
Sbjct 233 NVTQSELANRIGRSRPAITNSIRLLQLPTAVQRRVAAGVLSAGHARALLGLEAGAAAQDE 292
Query 237 LASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLST 296
LA+RIVAEGLSVRATEE VTLAN +A + PAP R+ + P L+ VA RLS
Sbjct 293 LAARIVAEGLSVRATEEIVTLANRDAG---DAEEKPKPAPRGRR--KDPELEAVAGRLSD 347
Query 297 TFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
F+T V+V++G+RKG+I ++ G DDLAR++ L+
Sbjct 348 RFETSVSVTMGRRKGRITIDVGDADDLARVLSLL 381
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/47 (62%), Positives = 34/47 (73%), Gaps = 10/47 (21%)
Query 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIG 47
M+Q +RKGGLGRGLAALIPTGP D GPR+GS ADV++G
Sbjct 1 MSQ--QRKGGLGRGLAALIPTGPED--------GPRLGSDAADVILG 37
>gi|300859521|ref|YP_003784504.1| chromosome partitioning protein [Corynebacterium pseudotuberculosis
FRC41]
gi|300686975|gb|ADK29897.1| chromosome partitioning protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302331765|gb|ADL21959.1| Chromosome partitioning protein ParB [Corynebacterium pseudotuberculosis
1002]
gi|308277457|gb|ADO27356.1| Chromosome partitioning protein ParB [Corynebacterium pseudotuberculosis
I19]
gi|341825896|gb|AEK93417.1| Chromosome partitioning protein ParB [Corynebacterium pseudotuberculosis
PAT10]
Length=350
Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/361 (57%), Positives = 237/361 (66%), Gaps = 59/361 (16%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG------------------ 48
RKGGLGRG+ ALI +G P G R+G++ ADVV GG
Sbjct 6 RKGGLGRGIGALI--------TGSPAPGQRIGASAADVVFGGAAEKKKQSHSPRDAKGAR 57
Query 49 --PVPDTSV----------------MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHS 90
P+ +V GA YREIP I N + PR VFDEE LAELVHS
Sbjct 58 ISPIIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHS 117
Query 91 IREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDA 150
IREFGLLQPIVVR A RY+I+MGERRWRA+ +AGL TIPAIVR+T D +LRDA
Sbjct 118 IREFGLLQPIVVREAADD----RYEIIMGERRWRASSKAGLKTIPAIVRKTDDSEMLRDA 173
Query 151 LLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRR 210
LLENIHRVQLNPLEEAAAYQQLL EFGVT +ELA ++GRSRP+ITNMIRLL LP+ VQR+
Sbjct 174 LLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRK 233
Query 211 VAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSD 270
VAAGVLSAGHARALL ++ G Q LA RIVAEGLSVRATEE VTL N
Sbjct 234 VAAGVLSAGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNR---------- 283
Query 271 ATTPAPPRRKPIQMPG-LQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGL 329
PAP +R+ P L + A RL+ DT+V+VS+GKRKGKIVVEFG +D RI+GL
Sbjct 284 GEKPAPKKREKAPTPEFLTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGL 343
Query 330 M 330
+
Sbjct 344 L 344
>gi|302207204|gb|ADL11546.1| Chromosome partitioning protein ParB [Corynebacterium pseudotuberculosis
C231]
Length=350
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 204/361 (57%), Positives = 237/361 (66%), Gaps = 59/361 (16%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG------------------ 48
RKGGLGRG+ ALI +G P G R+G++ ADVV GG
Sbjct 6 RKGGLGRGIGALI--------TGSPAPGQRIGASAADVVFGGAAEKKKQSHSPRDAKGAR 57
Query 49 --PVPDTSV----------------MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHS 90
P+ +V GA YREIP I N + PR VFDEE LAELVHS
Sbjct 58 ISPIIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHS 117
Query 91 IREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDA 150
IREFGLLQPIVVR A RY+I+MGERRWRA+ +AGL TIPA+VR+T D +LRDA
Sbjct 118 IREFGLLQPIVVREAADD----RYEIIMGERRWRASSKAGLKTIPAVVRKTDDSEMLRDA 173
Query 151 LLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRR 210
LLENIHRVQLNPLEEAAAYQQLL EFGVT +ELA ++GRSRP+ITNMIRLL LP+ VQR+
Sbjct 174 LLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRK 233
Query 211 VAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSD 270
VAAGVLSAGHARALL ++ G Q LA RIVAEGLSVRATEE VTL N
Sbjct 234 VAAGVLSAGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNR---------- 283
Query 271 ATTPAPPRRKPIQMPG-LQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGL 329
PAP +R+ P L + A RL+ DT+V+VS+GKRKGKIVVEFG +D RI+GL
Sbjct 284 GEKPAPKKREKAPTPEFLTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGL 343
Query 330 M 330
+
Sbjct 344 L 344
>gi|317509420|ref|ZP_07967038.1| ParB partition protein [Segniliparus rugosus ATCC BAA-974]
gi|316252249|gb|EFV11701.1| ParB partition protein [Segniliparus rugosus ATCC BAA-974]
Length=322
Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 202/343 (59%), Positives = 245/343 (72%), Gaps = 29/343 (8%)
Query 5 SRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMG----AIY 60
++RKGGLGRGLAALIP GP G PR+G + ADV+I P S M A Y
Sbjct 3 NQRKGGLGRGLAALIPAGPGSG--------PRLGDSAADVLI--PPNSGSAMEEGQLASY 52
Query 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
+EI IE NP+QPR VFDEEALAEL HSIREFGLLQP+VVR + G YQ+V+GE
Sbjct 53 QEIDVELIEPNPQQPRHVFDEEALAELTHSIREFGLLQPVVVRPVPGG-----YQLVVGE 107
Query 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
RR RA + AGL +IPAIV+ T DD LLRDAL+ENIHR QLNPLEEAAAYQQLL++FG TH
Sbjct 108 RRLRATKAAGLTSIPAIVKHTADDILLRDALIENIHRAQLNPLEEAAAYQQLLEDFGATH 167
Query 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
++LA R+GRSR L++N +RLL+LP+ VQR+VAAGVLSAGHARALL L+ EAQE+LASR
Sbjct 168 EQLAERLGRSRSLVSNTLRLLRLPVGVQRKVAAGVLSAGHARALLGLDGNLEAQEDLASR 227
Query 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
IVAEG+SVRA EE VTL++H++ +A PAPP L++VA+RL+ DT
Sbjct 228 IVAEGMSVRAAEEAVTLSSHKS--KAKPKGRGKPAPPAE-------LEEVADRLALALDT 278
Query 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLMT-TDGRDKGLHRD 342
V V L +KG+IV+EFGSV DL RI L+ G D+ RD
Sbjct 279 TVHVGLTSKKGRIVIEFGSVPDLERIADLIAPRPGEDRSRGRD 321
>gi|334697919|gb|AEG82716.1| chromosome partitioning protein [Corynebacterium ulcerans 809]
Length=350
Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 204/361 (57%), Positives = 234/361 (65%), Gaps = 59/361 (16%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVP---------DTSV-- 55
RKGGLGRG+ ALI +G PT G R+G + ADVV GG DT
Sbjct 6 RKGGLGRGIGALI--------TGSPTPGQRIGDSAADVVFGGAAEKKTQSRSQRDTKSAR 57
Query 56 -------------------------MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHS 90
GA YREIP I N + PR VFDEE LAELVHS
Sbjct 58 ISPILAQVVEKQSAESRGADQQLEEFGATYREIPIGLIIPNNKNPRSVFDEEDLAELVHS 117
Query 91 IREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDA 150
IREFGLLQPIVVR A Y+I+MGERRWRA+ +AG+ TIPAIVR+T D +LRDA
Sbjct 118 IREFGLLQPIVVRETADEH----YEIIMGERRWRASSKAGVKTIPAIVRKTDDSEMLRDA 173
Query 151 LLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRR 210
LLENIHRVQLNPLEEAAAYQQLL EFGVT +ELA ++GRSRP+ITNMIRLL LP+ VQR+
Sbjct 174 LLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVSVQRK 233
Query 211 VAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSD 270
VAAGVLSAGHARALL ++ G + Q LA RIVAEGLSVRATEE VTL N
Sbjct 234 VAAGVLSAGHARALLGVKGGEDHQIALADRIVAEGLSVRATEEAVTLMNR---------- 283
Query 271 ATTPAPPRRKPIQMPG-LQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGL 329
AP +R+ I P L A RL+ DT+V+VS+GKRKGKIVVEFG +D RI+GL
Sbjct 284 GEKTAPKKREKIPTPDFLTHAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGL 343
Query 330 M 330
+
Sbjct 344 L 344
>gi|337291948|ref|YP_004630969.1| chromosome partitioning protein [Corynebacterium ulcerans BR-AD22]
gi|334700254|gb|AEG85050.1| chromosome partitioning protein [Corynebacterium ulcerans BR-AD22]
Length=350
Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 204/361 (57%), Positives = 234/361 (65%), Gaps = 59/361 (16%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVP---------DTSV-- 55
RKGGLGRG+ ALI +G PT G R+G + ADVV GG DT
Sbjct 6 RKGGLGRGIGALI--------TGSPTPGQRIGDSAADVVFGGAAEKKTQSRSQRDTKSAR 57
Query 56 -------------------------MGAIYREIPPSAIEANPRQPRQVFDEEALAELVHS 90
GA YREIP I N + PR VFDEE LAELVHS
Sbjct 58 ISPILAQVVEKQSAESRGADQQLEEFGATYREIPIGLIIPNNKNPRSVFDEEDLAELVHS 117
Query 91 IREFGLLQPIVVRSLAGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDA 150
IREFGLLQPIVVR A Y+I+MGERRWRA+ +AG+ TIPAIVR+T D +LRDA
Sbjct 118 IREFGLLQPIVVRETADEH----YEIIMGERRWRASSKAGVKTIPAIVRKTDDSEMLRDA 173
Query 151 LLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRR 210
LLENIHRVQLNPLEEAAAYQQLL EFGVT +ELA ++GRSRP+ITNMIRLL LP+ VQR+
Sbjct 174 LLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVSVQRK 233
Query 211 VAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSD 270
VAAGVLSAGHARALL ++ G + Q LA RIVAEGLSVRATEE VTL N
Sbjct 234 VAAGVLSAGHARALLGVKGGEDHQIALADRIVAEGLSVRATEEAVTLMNR---------- 283
Query 271 ATTPAPPRRKPIQMPG-LQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGL 329
AP +R+ I P L A RL+ DT+V+VS+GKRKGKIVVEFG +D RI+GL
Sbjct 284 GEKTAPKKREKIPTPEFLTHAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGL 343
Query 330 M 330
+
Sbjct 344 L 344
>gi|305681627|ref|ZP_07404433.1| ParB-like protein [Corynebacterium matruchotii ATCC 14266]
gi|305658787|gb|EFM48288.1| ParB-like protein [Corynebacterium matruchotii ATCC 14266]
Length=360
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/351 (57%), Positives = 239/351 (69%), Gaps = 51/351 (14%)
Query 7 RKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGG---PVPDT---------- 53
RKGGLGRGLAALI P R+G AD+VIGG P PD
Sbjct 4 RKGGLGRGLAALITNQP----------DSRLGDNAADIVIGGARKPEPDAEETPTSAALR 53
Query 54 --------SVMGAIYREIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSL 105
+ + A Y+EIP I+ NP+ PR+VFD L ELVHSI+EFGLLQPIVVR
Sbjct 54 PQLEVVPETELAAHYQEIPTDLIDPNPKNPRKVFDNFDLDELVHSIKEFGLLQPIVVR-- 111
Query 106 AGSQTGVRYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEE 165
++G RY++VMGERRWRAA +AGL TIPAIVR+T DD++LRDALLEN+HRVQLNPLEE
Sbjct 112 ---RSGDRYELVMGERRWRAATQAGLDTIPAIVRKTDDDSMLRDALLENVHRVQLNPLEE 168
Query 166 AAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALL 225
AAAY+QLL+EFGVT ELA ++GRSRP++TNM+RLLKLP+ VQ++VAAGVLSAGHARALL
Sbjct 169 AAAYEQLLEEFGVTQSELADKLGRSRPVVTNMLRLLKLPVAVQQKVAAGVLSAGHARALL 228
Query 226 SLEAGPEAQEELASRIVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMP 285
++ E QE LA+RIV+EGLSVRATEE V L +H P RK + P
Sbjct 229 AINEDQEGQERLANRIVSEGLSVRATEEAVVLLSH------------GETGPVRKCAKAP 276
Query 286 ---GLQDVAERLSTTFDTRVTVSLGKRKGKIVVEFGSVDDLARIVGLMTTD 333
L AE L+ DT+V+VS+GK KG+IVVEFG DD RI+GL++ D
Sbjct 277 MPEYLTTAAESLADNLDTKVSVSMGKHKGRIVVEFGGKDDFERIMGLLSGD 327
Lambda K H
0.317 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 629895873072
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40