BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3924c Length=47 Score E Sequences producing significant alignments: (Bits) Value gi|15611060|ref|NP_218441.1| 50S ribosomal protein L34 [Mycobact... 87.0 9e-16 gi|296167144|ref|ZP_06849551.1| 50S ribosomal protein L34 [Mycob... 85.9 2e-15 gi|15828470|ref|NP_302733.1| 50S ribosomal protein L34 [Mycobact... 82.8 2e-14 gi|886324|gb|AAB53140.1| ribosomal protein L34 [Mycobacterium le... 82.0 3e-14 gi|41410448|ref|NP_963284.1| 50S ribosomal protein L34 [Mycobact... 80.9 6e-14 gi|54027647|ref|YP_121889.1| 50S ribosomal protein L34 [Nocardia... 80.1 1e-13 gi|111020654|ref|YP_703626.1| 50S ribosomal protein L34 [Rhodoco... 79.7 1e-13 gi|240168408|ref|ZP_04747067.1| 50S ribosomal protein L34 [Mycob... 79.7 1e-13 gi|226309519|ref|YP_002769481.1| 50S ribosomal protein L34 [Rhod... 79.0 2e-13 gi|108802372|ref|YP_642569.1| 50S ribosomal protein L34 [Mycobac... 79.0 2e-13 gi|118620079|ref|YP_908411.1| 50S ribosomal protein L34 [Mycobac... 78.6 3e-13 gi|325677522|ref|ZP_08157186.1| 50S ribosomal protein L34 [Rhodo... 78.2 3e-13 gi|336326732|ref|YP_004606698.1| 50S ribosomal protein L34 [Cory... 77.8 5e-13 gi|21325872|dbj|BAC00493.1| Ribosomal protein L34 [Corynebacteri... 77.4 6e-13 gi|333922236|ref|YP_004495817.1| 50S ribosomal protein L34 [Amyc... 77.4 7e-13 gi|19554289|ref|NP_602291.1| 50S ribosomal protein L34 [Coryneba... 77.0 8e-13 gi|118469420|ref|YP_891138.1| 50S ribosomal protein L34 [Mycobac... 77.0 8e-13 gi|296141907|ref|YP_003649150.1| 50S ribosomal protein L34 [Tsuk... 77.0 8e-13 gi|120407007|ref|YP_956836.1| 50S ribosomal protein L34 [Mycobac... 77.0 8e-13 gi|302531357|ref|ZP_07283699.1| predicted protein [Streptomyces ... 76.6 1e-12 gi|169632028|ref|YP_001705677.1| 50S ribosomal protein L34 [Myco... 76.3 1e-12 gi|68537199|ref|YP_251904.1| 50S ribosomal protein L34 [Coryneba... 75.9 2e-12 gi|343928734|ref|ZP_08768179.1| 50S ribosomal protein L34 [Gordo... 75.9 2e-12 gi|319949432|ref|ZP_08023493.1| 50S ribosomal protein L34 [Dietz... 75.5 2e-12 gi|262204662|ref|YP_003275870.1| 50S ribosomal protein L34 [Gord... 75.5 2e-12 gi|25029503|ref|NP_739557.1| 50S ribosomal protein L34 [Coryneba... 75.5 3e-12 gi|256381076|ref|YP_003104736.1| 50S ribosomal protein L34 [Acti... 75.1 3e-12 gi|227487663|ref|ZP_03917979.1| 50S ribosomal protein L34 [Coryn... 75.1 3e-12 gi|300791165|ref|YP_003771456.1| 50S ribosomal protein L34 [Amyc... 74.7 4e-12 gi|326383908|ref|ZP_08205592.1| 50S ribosomal protein L34 [Gordo... 74.7 4e-12 gi|300859527|ref|YP_003784510.1| 50S ribosomal protein L34 [Cory... 74.3 6e-12 gi|237786655|ref|YP_002907360.1| 50S ribosomal protein L34 [Cory... 73.9 6e-12 gi|38234914|ref|NP_940681.1| 50S ribosomal protein L34 [Coryneba... 73.6 8e-12 gi|334563321|ref|ZP_08516312.1| 50S ribosomal protein L34 [Coryn... 73.2 1e-11 gi|331700394|ref|YP_004336633.1| 50S ribosomal protein L34 [Pseu... 73.2 1e-11 gi|305681618|ref|ZP_07404424.1| ribosomal protein L34 [Corynebac... 72.8 1e-11 gi|172041704|ref|YP_001801418.1| 50S ribosomal protein L34 [Cory... 72.4 2e-11 gi|86743223|ref|YP_483623.1| 50S ribosomal protein L34 [Frankia ... 72.0 3e-11 gi|7674291|sp|Q9ZB91.1|RL34_MYCAV RecName: Full=50S ribosomal pr... 71.6 3e-11 gi|229822699|ref|YP_002884225.1| 50S ribosomal protein L34 [Beut... 71.6 4e-11 gi|340795995|ref|YP_004761458.1| 50S ribosomal protein L34 [Cory... 71.6 4e-11 gi|288916711|ref|ZP_06411086.1| ribosomal protein L34 [Frankia s... 71.2 5e-11 gi|158319058|ref|YP_001511566.1| 50S ribosomal protein L34 [Fran... 71.2 5e-11 gi|269797068|ref|YP_003316523.1| 50S ribosomal protein L34P [San... 70.5 7e-11 gi|336176144|ref|YP_004581519.1| 50S ribosomal protein L34 [Fran... 70.5 7e-11 gi|227506188|ref|ZP_03936237.1| 50S ribosomal protein L34 [Coryn... 70.5 8e-11 gi|296131547|ref|YP_003638797.1| ribosomal protein L34 [Cellulom... 70.5 8e-11 gi|297563783|ref|YP_003682757.1| 50S ribosomal protein L34 [Noca... 70.1 9e-11 gi|336322298|ref|YP_004602266.1| 50S ribosomal protein L34 [Cell... 70.1 9e-11 gi|258655511|ref|YP_003204667.1| 50S ribosomal protein L34 [Naka... 70.1 1e-10 >gi|15611060|ref|NP_218441.1| 50S ribosomal protein L34 [Mycobacterium tuberculosis H37Rv] gi|15843558|ref|NP_338595.1| 50S ribosomal protein L34 [Mycobacterium tuberculosis CDC1551] gi|31795097|ref|NP_857590.1| 50S ribosomal protein L34 [Mycobacterium bovis AF2122/97] 85 more sequence titles Length=47 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 46/47 (98%), Positives = 47/47 (100%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 +TKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA Sbjct 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >gi|296167144|ref|ZP_06849551.1| 50S ribosomal protein L34 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897466|gb|EFG77065.1| 50S ribosomal protein L34 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=92 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/47 (96%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 V KGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRR LSA Sbjct 46 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRALSA 92 >gi|15828470|ref|NP_302733.1| 50S ribosomal protein L34 [Mycobacterium leprae TN] gi|221230947|ref|YP_002504363.1| 50S ribosomal protein L34 [Mycobacterium leprae Br4923] gi|13432237|sp|P46386.2|RL34_MYCLE RecName: Full=50S ribosomal protein L34 gi|254801892|sp|B8ZTN7.1|RL34_MYCLB RecName: Full=50S ribosomal protein L34 gi|13093900|emb|CAC32245.1| 50S ribosomal protein L34 [Mycobacterium leprae] gi|219934054|emb|CAR72813.1| 50S ribosomal protein L34 [Mycobacterium leprae Br4923] Length=47 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/47 (92%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVS RRRKGRRTL+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSDRRRKGRRTLTA 47 >gi|886324|gb|AAB53140.1| ribosomal protein L34 [Mycobacterium leprae] Length=47 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/45 (96%), Positives = 44/45 (98%), Gaps = 0/45 (0%) Query 3 KGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVS RRRKGRRTL+A Sbjct 3 KGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSDRRRKGRRTLTA 47 >gi|41410448|ref|NP_963284.1| 50S ribosomal protein L34 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463174|ref|YP_884423.1| 50S ribosomal protein L34 [Mycobacterium avium 104] gi|254777662|ref|ZP_05219178.1| 50S ribosomal protein L34 [Mycobacterium avium subsp. avium ATCC 25291] 9 more sequence titles Length=47 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 42/47 (90%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IVS RRRKGRR LSA Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA 47 >gi|54027647|ref|YP_121889.1| 50S ribosomal protein L34 [Nocardia farcinica IFM 10152] gi|71649147|sp|Q5YMR6.1|RL34_NOCFA RecName: Full=50S ribosomal protein L34 gi|54019155|dbj|BAD60525.1| putative ribosomal protein L34 [Nocardia farcinica IFM 10152] Length=47 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/47 (88%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IVS+RRRKGR TL+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA 47 >gi|111020654|ref|YP_703626.1| 50S ribosomal protein L34 [Rhodococcus jostii RHA1] gi|226362894|ref|YP_002780674.1| 50S ribosomal protein L34 [Rhodococcus opacus B4] gi|123046083|sp|Q0SAG8.1|RL34_RHOSR RecName: Full=50S ribosomal protein L34 gi|254801897|sp|C1B7S6.1|RL34_RHOOB RecName: Full=50S ribosomal protein L34 gi|110820184|gb|ABG95468.1| 50S ribosomal protein L34 [Rhodococcus jostii RHA1] gi|226241381|dbj|BAH51729.1| 50S ribosomal protein L34 [Rhodococcus opacus B4] Length=47 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/47 (86%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IVS+RRRKGR +L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRESLTA 47 >gi|240168408|ref|ZP_04747067.1| 50S ribosomal protein L34 [Mycobacterium kansasii ATCC 12478] Length=47 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/47 (88%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IVS RRRKGRR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALTA 47 >gi|226309519|ref|YP_002769481.1| 50S ribosomal protein L34 [Rhodococcus erythropolis PR4] gi|229491202|ref|ZP_04385030.1| ribosomal protein L34 [Rhodococcus erythropolis SK121] gi|259491950|sp|C0ZVP8.1|RL34_RHOE4 RecName: Full=50S ribosomal protein L34 gi|226188638|dbj|BAH36742.1| 50S ribosomal protein L34 [Rhodococcus erythropolis PR4] gi|229321940|gb|EEN87733.1| ribosomal protein L34 [Rhodococcus erythropolis SK121] Length=47 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/47 (86%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IVS+RRRKGR +L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRDSLTA 47 >gi|108802372|ref|YP_642569.1| 50S ribosomal protein L34 [Mycobacterium sp. MCS] gi|119866065|ref|YP_936017.1| 50S ribosomal protein L34 [Mycobacterium sp. KMS] gi|126438352|ref|YP_001074043.1| 50S ribosomal protein L34 [Mycobacterium sp. JLS] 8 more sequence titles Length=47 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/47 (86%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR+L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRSLTA 47 >gi|118620079|ref|YP_908411.1| 50S ribosomal protein L34 [Mycobacterium ulcerans Agy99] gi|183985458|ref|YP_001853749.1| 50S ribosomal protein L34 RpmH [Mycobacterium marinum M] gi|166199796|sp|A0PX71.1|RL34_MYCUA RecName: Full=50S ribosomal protein L34 gi|226712539|sp|B2HNT9.1|RL34_MYCMM RecName: Full=50S ribosomal protein L34 gi|118572189|gb|ABL06940.1| 50S ribosomal protein L34 RpmH [Mycobacterium ulcerans Agy99] gi|183178784|gb|ACC43894.1| 50S ribosomal protein L34 RpmH [Mycobacterium marinum M] Length=47 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/47 (86%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 >gi|325677522|ref|ZP_08157186.1| 50S ribosomal protein L34 [Rhodococcus equi ATCC 33707] gi|325551769|gb|EGD21467.1| 50S ribosomal protein L34 [Rhodococcus equi ATCC 33707] Length=47 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/47 (86%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IVS+RRRKGR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRAELTA 47 >gi|336326732|ref|YP_004606698.1| 50S ribosomal protein L34 [Corynebacterium resistens DSM 45100] gi|336102714|gb|AEI10534.1| 50S ribosomal protein L34 [Corynebacterium resistens DSM 45100] Length=47 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFR RMRTRAGR+IVS+RRRKGR++L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRRKGRKSLTA 47 >gi|21325872|dbj|BAC00493.1| Ribosomal protein L34 [Corynebacterium glutamicum ATCC 13032] Length=112 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RRRKGR L+A Sbjct 66 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVAARRRKGRAKLTA 112 >gi|333922236|ref|YP_004495817.1| 50S ribosomal protein L34 [Amycolicicoccus subflavus DQS3-9A1] gi|333484457|gb|AEF43017.1| 50S ribosomal protein L34 [Amycolicicoccus subflavus DQS3-9A1] Length=47 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 39/46 (85%), Positives = 43/46 (94%), Gaps = 0/46 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLS 46 + KGKRTFQPNNRRRARVHGFRLRMRTRAGRSI+S+RRRKGR L+ Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIISARRRKGRAELA 46 >gi|19554289|ref|NP_602291.1| 50S ribosomal protein L34 [Corynebacterium glutamicum ATCC 13032] gi|62391947|ref|YP_227349.1| 50S ribosomal protein L34 [Corynebacterium glutamicum ATCC 13032] gi|145297093|ref|YP_001139914.1| 50S ribosomal protein L34 [Corynebacterium glutamicum R] gi|71648989|sp|Q6M1C1.1|RL34_CORGL RecName: Full=50S ribosomal protein L34 gi|166199770|sp|A4QIE6.1|RL34_CORGB RecName: Full=50S ribosomal protein L34 gi|41223094|emb|CAF19039.1| 50S RIBOSOMAL PROTEIN L34 [Corynebacterium glutamicum ATCC 13032] gi|140847013|dbj|BAF56012.1| hypothetical protein [Corynebacterium glutamicum R] gi|344045532|gb|EGV41203.1| hypothetical protein CgS9114_04340 [Corynebacterium glutamicum S9114] Length=47 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RRRKGR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVAARRRKGRAKLTA 47 >gi|118469420|ref|YP_891138.1| 50S ribosomal protein L34 [Mycobacterium smegmatis str. MC2 155] gi|152060500|sp|A0R7K0.1|RL34_MYCS2 RecName: Full=50S ribosomal protein L34 gi|152060501|sp|P0C562.1|RL34_MYCSM RecName: Full=50S ribosomal protein L34 gi|1321892|emb|CAA63247.1| rpmH [Mycobacterium smegmatis] gi|118170707|gb|ABK71603.1| ribosomal protein L34 [Mycobacterium smegmatis str. MC2 155] Length=47 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 >gi|296141907|ref|YP_003649150.1| 50S ribosomal protein L34 [Tsukamurella paurometabola DSM 20162] gi|296030041|gb|ADG80811.1| ribosomal protein L34 [Tsukamurella paurometabola DSM 20162] Length=47 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/47 (86%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IVSSRR KGR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSSRRSKGRAKLTA 47 >gi|120407007|ref|YP_956836.1| 50S ribosomal protein L34 [Mycobacterium vanbaalenii PYR-1] gi|145221422|ref|YP_001132100.1| 50S ribosomal protein L34 [Mycobacterium gilvum PYR-GCK] gi|315446826|ref|YP_004079705.1| 50S ribosomal protein L34P [Mycobacterium sp. Spyr1] gi|166199797|sp|A1TI30.1|RL34_MYCVP RecName: Full=50S ribosomal protein L34 gi|189042723|sp|A4T4T9.1|RL34_MYCGI RecName: Full=50S ribosomal protein L34 gi|119959825|gb|ABM16830.1| LSU ribosomal protein L34P [Mycobacterium vanbaalenii PYR-1] gi|145213908|gb|ABP43312.1| LSU ribosomal protein L34P [Mycobacterium gilvum PYR-GCK] gi|315265129|gb|ADU01871.1| LSU ribosomal protein L34P [Mycobacterium sp. Spyr1] Length=47 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 45/47 (96%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRA+VHGFRLRMRTRAGR+IV++RR KGRR+L+A Sbjct 1 MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRAIVTARRAKGRRSLTA 47 >gi|302531357|ref|ZP_07283699.1| predicted protein [Streptomyces sp. AA4] gi|302440252|gb|EFL12068.1| predicted protein [Streptomyces sp. AA4] Length=79 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 V+KGKRTFQPNNRRRA+ HGFRLRMRTRAGR+I+++RRRKGR LSA Sbjct 33 VSKGKRTFQPNNRRRAKTHGFRLRMRTRAGRAILAARRRKGRAELSA 79 >gi|169632028|ref|YP_001705677.1| 50S ribosomal protein L34 [Mycobacterium abscessus ATCC 19977] gi|226712538|sp|B1MN97.1|RL34_MYCA9 RecName: Full=50S ribosomal protein L34 gi|169243995|emb|CAM65023.1| 50S ribosomal protein L34 [Mycobacterium abscessus] Length=47 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRAR HGFRLRMRTRAGR+I++ RRRKGRR L+A Sbjct 1 MAKGKRTFQPNNRRRARTHGFRLRMRTRAGRAIIAGRRRKGRRELTA 47 >gi|68537199|ref|YP_251904.1| 50S ribosomal protein L34 [Corynebacterium jeikeium K411] gi|260579560|ref|ZP_05847431.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734] gi|123649950|sp|Q4JSC1.1|RL34_CORJK RecName: Full=50S ribosomal protein L34 gi|68264798|emb|CAI38286.1| 50S ribosomal protein L34 [Corynebacterium jeikeium K411] gi|258602331|gb|EEW15637.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734] Length=47 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFR RMRTRAGR+IVS+RR KGR++L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRNKGRKSLTA 47 >gi|343928734|ref|ZP_08768179.1| 50S ribosomal protein L34 [Gordonia alkanivorans NBRC 16433] gi|343761483|dbj|GAA15105.1| 50S ribosomal protein L34 [Gordonia alkanivorans NBRC 16433] Length=47 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRR+RVHGFRLRMRTRAGR+IVSSRR KGR L+A Sbjct 1 MAKGKRTFQPNNRRRSRVHGFRLRMRTRAGRAIVSSRRNKGRAKLTA 47 >gi|319949432|ref|ZP_08023493.1| 50S ribosomal protein L34 [Dietzia cinnamea P4] gi|319436894|gb|EFV91953.1| 50S ribosomal protein L34 [Dietzia cinnamea P4] Length=47 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRA+VHGFRLRMRTRAGR IV +RRRKGR +L+A Sbjct 1 MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRGIVGARRRKGRASLTA 47 >gi|262204662|ref|YP_003275870.1| 50S ribosomal protein L34 [Gordonia bronchialis DSM 43247] gi|262088009|gb|ACY23977.1| ribosomal protein L34 [Gordonia bronchialis DSM 43247] Length=47 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+SRR KGR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVNSRRTKGRAKLTA 47 >gi|25029503|ref|NP_739557.1| 50S ribosomal protein L34 [Corynebacterium efficiens YS-314] gi|259508315|ref|ZP_05751215.1| conserved domain protein [Corynebacterium efficiens YS-314] gi|71648986|sp|Q8FSU7.1|RL34_COREF RecName: Full=50S ribosomal protein L34 gi|23494792|dbj|BAC19757.1| putative 50S ribosomal protein L34 [Corynebacterium efficiens YS-314] gi|259164133|gb|EEW48687.1| conserved domain protein [Corynebacterium efficiens YS-314] Length=47 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFR RMRTRAGR+IV++RRRKGR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVAARRRKGREKLTA 47 >gi|256381076|ref|YP_003104736.1| 50S ribosomal protein L34 [Actinosynnema mirum DSM 43827] gi|255925379|gb|ACU40890.1| ribosomal protein L34 [Actinosynnema mirum DSM 43827] Length=47 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/47 (79%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 ++KGKRTFQPNNRRRA+ HGFRLRMRTRAGR+I+S+RR KGR+ LSA Sbjct 1 MSKGKRTFQPNNRRRAKTHGFRLRMRTRAGRAILSARRTKGRKQLSA 47 >gi|227487663|ref|ZP_03917979.1| 50S ribosomal protein L34 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541372|ref|ZP_03971421.1| 50S ribosomal protein L34 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092357|gb|EEI27669.1| 50S ribosomal protein L34 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182923|gb|EEI63895.1| 50S ribosomal protein L34 [Corynebacterium glucuronolyticum ATCC 51866] Length=47 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFR RMRTRAGR+IVS+RR+KGR LSA Sbjct 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRKKGRARLSA 47 >gi|300791165|ref|YP_003771456.1| 50S ribosomal protein L34 [Amycolatopsis mediterranei U32] gi|299800679|gb|ADJ51054.1| large subunit ribosomal protein L34 [Amycolatopsis mediterranei U32] gi|340532865|gb|AEK48070.1| hypothetical protein RAM_48025 [Amycolatopsis mediterranei S699] Length=47 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/47 (79%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 ++KGKRTFQPNNRRRA+ HGFRLRMRTRAGR+I+++RRRKGR LSA Sbjct 1 MSKGKRTFQPNNRRRAKTHGFRLRMRTRAGRAILAARRRKGRGALSA 47 >gi|326383908|ref|ZP_08205592.1| 50S ribosomal protein L34 [Gordonia neofelifaecis NRRL B-59395] gi|326197367|gb|EGD54557.1| 50S ribosomal protein L34 [Gordonia neofelifaecis NRRL B-59395] Length=47 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/47 (81%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGR L+A Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVNARRSKGRAKLTA 47 >gi|300859527|ref|YP_003784510.1| 50S ribosomal protein L34 [Corynebacterium pseudotuberculosis FRC41] gi|337291954|ref|YP_004630975.1| 50S ribosomal protein L34 [Corynebacterium ulcerans BR-AD22] gi|300686981|gb|ADK29903.1| 50S ribosomal protein L34 [Corynebacterium pseudotuberculosis FRC41] 6 more sequence titles Length=47 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/47 (79%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRAR HGFR+RMRTRAGR+IV++RRRKGR L+A Sbjct 1 MAKGKRTFQPNNRRRARKHGFRIRMRTRAGRAIVAARRRKGREKLTA 47 >gi|237786655|ref|YP_002907360.1| 50S ribosomal protein L34 [Corynebacterium kroppenstedtii DSM 44385] gi|259491934|sp|C4LGJ8.1|RL34_CORK4 RecName: Full=50S ribosomal protein L34 gi|237759567|gb|ACR18817.1| 50S ribosomal protein L34 [Corynebacterium kroppenstedtii DSM 44385] Length=47 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/47 (79%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRR+RVHGFR RM TRAGR+IVS+RRRKGR++L+A Sbjct 1 MAKGKRTFQPNNRRRSRVHGFRSRMSTRAGRAIVSARRRKGRKSLTA 47 >gi|38234914|ref|NP_940681.1| 50S ribosomal protein L34 [Corynebacterium diphtheriae NCTC 13129] gi|71648981|sp|Q6NE95.1|RL34_CORDI RecName: Full=50S ribosomal protein L34 gi|38201179|emb|CAE50904.1| 50S ribosomal protein L34 [Corynebacterium diphtheriae] Length=47 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 36/47 (77%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRAR HGFR+RMRTRAGR+IV++RR KGR++L+A Sbjct 1 MAKGKRTFQPNNRRRARKHGFRIRMRTRAGRAIVAARRNKGRKSLTA 47 >gi|334563321|ref|ZP_08516312.1| 50S ribosomal protein L34 [Corynebacterium bovis DSM 20582] Length=47 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/47 (77%), Positives = 44/47 (94%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRAR+HGFR RMRTR+GR+IVS+RR KGR++L+A Sbjct 1 MAKGKRTFQPNNRRRARLHGFRTRMRTRSGRAIVSARRSKGRKSLTA 47 >gi|331700394|ref|YP_004336633.1| 50S ribosomal protein L34 [Pseudonocardia dioxanivorans CB1190] gi|326955083|gb|AEA28780.1| 50S ribosomal protein L34 [Pseudonocardia dioxanivorans CB1190] Length=47 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/47 (79%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 ++KGKRTFQPNNRRRAR HGFRLRMRTRAGR+I+++RR KGR LSA Sbjct 1 MSKGKRTFQPNNRRRARKHGFRLRMRTRAGRAILAARRSKGRDKLSA 47 >gi|305681618|ref|ZP_07404424.1| ribosomal protein L34 [Corynebacterium matruchotii ATCC 14266] gi|305658778|gb|EFM48279.1| ribosomal protein L34 [Corynebacterium matruchotii ATCC 14266] Length=47 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/47 (79%), Positives = 43/47 (92%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 +TKGKRTFQPNNRRRAR HGFR+RMRTRAGR+IV++RR KGR L+A Sbjct 1 MTKGKRTFQPNNRRRARKHGFRIRMRTRAGRAIVAARRSKGRAKLTA 47 >gi|172041704|ref|YP_001801418.1| 50S ribosomal protein L34 [Corynebacterium urealyticum DSM 7109] gi|226712424|sp|B1VJ38.1|RL34_CORU7 RecName: Full=50S ribosomal protein L34 gi|171853008|emb|CAQ05984.1| 50S ribosomal protein L34 [Corynebacterium urealyticum DSM 7109] Length=45 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/43 (84%), Positives = 42/43 (98%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRT+QPNNRRRARVHGFR RMRTRAGR+IVS+RRRKGR++L+A Sbjct 3 KRTYQPNNRRRARVHGFRTRMRTRAGRAIVSARRRKGRKSLTA 45 >gi|86743223|ref|YP_483623.1| 50S ribosomal protein L34 [Frankia sp. CcI3] gi|123750582|sp|Q2J498.1|RL34_FRASC RecName: Full=50S ribosomal protein L34 gi|86570085|gb|ABD13894.1| LSU ribosomal protein L34P [Frankia sp. CcI3] Length=45 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/43 (87%), Positives = 40/43 (94%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRAR HGFRLRMRTRAGR+I+S+RRRKGR LSA Sbjct 3 KRTFQPNNRRRARTHGFRLRMRTRAGRAILSARRRKGRSELSA 45 >gi|7674291|sp|Q9ZB91.1|RL34_MYCAV RecName: Full=50S ribosomal protein L34 gi|3953449|gb|AAC83391.1| RpmH [Mycobacterium avium] Length=46 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/47 (83%), Positives = 42/47 (90%), Gaps = 1/47 (2%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRARVHGFRLRMR +GR+IVS RRRKGRR LSA Sbjct 1 MAKGKRTFQPNNRRRARVHGFRLRMRN-SGRAIVSGRRRKGRRALSA 46 >gi|229822699|ref|YP_002884225.1| 50S ribosomal protein L34 [Beutenbergia cavernae DSM 12333] gi|259491932|sp|C5C6N9.1|RL34_BEUC1 RecName: Full=50S ribosomal protein L34 gi|229568612|gb|ACQ82463.1| ribosomal protein L34 [Beutenbergia cavernae DSM 12333] Length=45 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/43 (84%), Positives = 41/43 (96%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRA+VHGFRLRMRTRAGR+I+++RRRKGR LSA Sbjct 3 KRTFQPNNRRRAKVHGFRLRMRTRAGRAILAARRRKGRVELSA 45 >gi|340795995|ref|YP_004761458.1| 50S ribosomal protein L34 [Corynebacterium variabile DSM 44702] gi|340535905|gb|AEK38385.1| 50S ribosomal protein L34 [Corynebacterium variabile DSM 44702] Length=47 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/47 (77%), Positives = 42/47 (90%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRA HGFR RMRTRAGR+IVS+RR KGR++L+A Sbjct 1 MAKGKRTFQPNNRRRAHKHGFRTRMRTRAGRAIVSARRSKGRKSLTA 47 >gi|288916711|ref|ZP_06411086.1| ribosomal protein L34 [Frankia sp. EUN1f] gi|288351966|gb|EFC86168.1| ribosomal protein L34 [Frankia sp. EUN1f] Length=45 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/43 (87%), Positives = 39/43 (91%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRAR HGFRLRMRTRAGR+I+S RRRKGR LSA Sbjct 3 KRTFQPNNRRRARTHGFRLRMRTRAGRAILSGRRRKGRNELSA 45 >gi|158319058|ref|YP_001511566.1| 50S ribosomal protein L34 [Frankia sp. EAN1pec] gi|226712519|sp|A8L8W3.1|RL34_FRASN RecName: Full=50S ribosomal protein L34 gi|158114463|gb|ABW16660.1| ribosomal protein L34 [Frankia sp. EAN1pec] Length=45 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/43 (87%), Positives = 39/43 (91%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRAR HGFRLRMRTRAGRSI+S+RR KGR LSA Sbjct 3 KRTFQPNNRRRARTHGFRLRMRTRAGRSILSARRSKGRSQLSA 45 >gi|269797068|ref|YP_003316523.1| 50S ribosomal protein L34P [Sanguibacter keddieii DSM 10542] gi|269099253|gb|ACZ23689.1| LSU ribosomal protein L34P [Sanguibacter keddieii DSM 10542] Length=49 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/43 (82%), Positives = 40/43 (94%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRA+ HGFRLRMRTRAGR+I+++RRRKGR LSA Sbjct 7 KRTFQPNNRRRAKTHGFRLRMRTRAGRAILAARRRKGRSELSA 49 >gi|336176144|ref|YP_004581519.1| 50S ribosomal protein L34 [Frankia symbiont of Datisca glomerata] gi|334857124|gb|AEH07598.1| 50S ribosomal protein L34 [Frankia symbiont of Datisca glomerata] Length=45 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/43 (82%), Positives = 40/43 (94%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRA+ HGFRLRMRTRAGR+++S+RRRKGR LSA Sbjct 3 KRTFQPNNRRRAKTHGFRLRMRTRAGRAVLSARRRKGRSELSA 45 >gi|227506188|ref|ZP_03936237.1| 50S ribosomal protein L34 [Corynebacterium striatum ATCC 6940] gi|227197212|gb|EEI77260.1| 50S ribosomal protein L34 [Corynebacterium striatum ATCC 6940] Length=47 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/47 (77%), Positives = 41/47 (88%), Gaps = 0/47 (0%) Query 1 VTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 + KGKRTFQPNNRRRAR HGFR RM TRAGR+IV++RR+KGR LSA Sbjct 1 MAKGKRTFQPNNRRRARKHGFRTRMSTRAGRAIVAARRKKGRAKLSA 47 >gi|296131547|ref|YP_003638797.1| ribosomal protein L34 [Cellulomonas flavigena DSM 20109] gi|296023362|gb|ADG76598.1| ribosomal protein L34 [Cellulomonas flavigena DSM 20109] Length=49 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/43 (82%), Positives = 40/43 (94%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRA+ HGFRLRMRTRAGR+I+++RRRKGR LSA Sbjct 7 KRTFQPNNRRRAKTHGFRLRMRTRAGRAILAARRRKGRAELSA 49 >gi|297563783|ref|YP_003682757.1| 50S ribosomal protein L34 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848231|gb|ADH70251.1| ribosomal protein L34 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=47 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 34/42 (81%), Positives = 40/42 (96%), Gaps = 0/42 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLS 46 KRT+QPNNRRRA+VHGFRLRMRTRAGR+I++SRRRKGR L+ Sbjct 3 KRTYQPNNRRRAKVHGFRLRMRTRAGRAIIASRRRKGRAALT 44 >gi|336322298|ref|YP_004602266.1| 50S ribosomal protein L34 [Cellvibrio gilvus ATCC 13127] gi|336105879|gb|AEI13698.1| ribosomal protein L34 [Cellvibrio gilvus ATCC 13127] Length=45 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 35/43 (82%), Positives = 40/43 (94%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRA+ HGFRLRMRTRAGR+I+++RRRKGR LSA Sbjct 3 KRTFQPNNRRRAKTHGFRLRMRTRAGRAILAARRRKGRSELSA 45 >gi|258655511|ref|YP_003204667.1| 50S ribosomal protein L34 [Nakamurella multipartita DSM 44233] gi|317126740|ref|YP_004100852.1| 50S ribosomal protein L34P [Intrasporangium calvum DSM 43043] gi|332672293|ref|YP_004455301.1| 50S ribosomal protein L34 [Cellulomonas fimi ATCC 484] gi|258558736|gb|ACV81678.1| ribosomal protein L34 [Nakamurella multipartita DSM 44233] gi|315590828|gb|ADU50125.1| LSU ribosomal protein L34P [Intrasporangium calvum DSM 43043] gi|332341331|gb|AEE47914.1| ribosomal protein L34 [Cellulomonas fimi ATCC 484] Length=45 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/43 (82%), Positives = 40/43 (94%), Gaps = 0/43 (0%) Query 5 KRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 KRTFQPNNRRRA+ HGFRLRMRTRAGR+I+++RRRKGR LSA Sbjct 3 KRTFQPNNRRRAKTHGFRLRMRTRAGRAILAARRRKGRAELSA 45 Lambda K H 0.329 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127400356460 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40