BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML0002 (399 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P46387|DPO3B_MYCLE Tax_Id=1769 (dnaN)RecName: Full=DNA polyme... 755 0.0 tr|B8ZTN9|B8ZTN9_MYCLB Tax_Id=561304 (dnaN)SubName: Full=Putativ... 755 0.0 sp|Q9L7L6|DPO3B_MYCPA Tax_Id=1770 (dnaN)RecName: Full=DNA polyme... 632 e-179 tr|B2HI47|B2HI47_MYCMM Tax_Id=216594 (dnaN)SubName: Full=DNA pol... 621 e-176 tr|A0PKB3|A0PKB3_MYCUA Tax_Id=362242 (dnaN)SubName: Full=DNA pol... 614 e-174 tr|A0Q8R7|A0Q8R7_MYCA1 Tax_Id=243243 (dnaN)SubName: Full=DNA pol... 613 e-173 sp|Q50790|DPO3B_MYCTU Tax_Id=1773 (dnaN)RecName: Full=DNA polyme... 594 e-168 tr|C6DQ77|C6DQ77_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 594 e-168 tr|A5TY70|A5TY70_MYCTA Tax_Id=419947 (dnaN)SubName: Full=DNA pol... 594 e-168 tr|Q9EVN6|Q9EVN6_MYCTU Tax_Id=1773 (dnaN)SubName: Full=DnaN;[Myc... 594 e-168 tr|A5WI56|A5WI56_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 594 e-168 tr|A4KN34|A4KN34_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 594 e-168 tr|A2VMU4|A2VMU4_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 594 e-168 sp|O33914|DPO3B_MYCBO Tax_Id=1765 (dnaN)RecName: Full=DNA polyme... 594 e-168 tr|C1AIZ9|C1AIZ9_MYCBT Tax_Id=561275 (dnaN)SubName: Full=DNA pol... 594 e-168 tr|A1KEE3|A1KEE3_MYCBP Tax_Id=410289 (dnaN_1)SubName: Full=DNA p... 594 e-168 tr|A3PSD8|A3PSD8_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 586 e-165 tr|Q1BG60|Q1BG60_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 585 e-165 tr|A1U8S1|A1U8S1_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 585 e-165 tr|A1T103|A1T103_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 578 e-163 sp|P52851|DPO3B_MYCSM Tax_Id=1772 (dnaN)RecName: Full=DNA polyme... 576 e-162 tr|A0QND6|A0QND6_MYCS2 Tax_Id=246196 (dnaN)SubName: Full=DNA pol... 576 e-162 tr|A4T4T7|A4T4T7_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 573 e-161 tr|B1MDH7|B1MDH7_MYCA9 Tax_Id=561007 (dnaN)SubName: Full=DNA pol... 537 e-151 tr|C2AIV3|C2AIV3_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 493 e-137 tr|Q0SAG6|Q0SAG6_RHOSR Tax_Id=101510 (dnaN)SubName: Full=DNA-dir... 486 e-135 tr|C1B7S8|C1B7S8_RHOOB Tax_Id=632772 (dnaN)SubName: Full=DNA pol... 481 e-134 tr|Q5Z3Z7|Q5Z3Z7_NOCFA Tax_Id=37329 (dnaN)SubName: Full=Putative... 474 e-131 tr|C0ZLE2|C0ZLE2_RHOE4 Tax_Id=234621 (dnaN)SubName: Full=DNA pol... 473 e-131 tr|C3JLE0|C3JLE0_RHOER Tax_Id=596309 (dnaN)SubName: Full=DNA pol... 473 e-131 tr|D0LA34|D0LA34_9ACTO Tax_Id=526226 SubName: Full=DNA polymeras... 468 e-130 tr|Q5YSM7|Q5YSM7_NOCFA Tax_Id=37329 (dnaN2)SubName: Full=Putativ... 417 e-114 tr|A4F5N3|A4F5N3_SACEN Tax_Id=405948 (dnaN)SubName: Full=DNA pol... 408 e-112 tr|C6WCF5|C6WCF5_ACTMD Tax_Id=446462 SubName: Full=DNA polymeras... 405 e-111 tr|C7MRN4|C7MRN4_SACVD Tax_Id=471857 SubName: Full=DNA polymeras... 400 e-109 tr|B1VDX3|B1VDX3_CORU7 Tax_Id=504474 SubName: Full=DNA polymeras... 396 e-108 tr|Q4JYF6|Q4JYF6_CORJK Tax_Id=306537 (dnaN)SubName: Full=DNA pol... 395 e-108 tr|C8RVG0|C8RVG0_CORJE Tax_Id=525262 (dnaN)SubName: Full=DNA pol... 395 e-108 tr|C4LGB1|C4LGB1_CORK4 Tax_Id=645127 SubName: Full=DNA polymeras... 387 e-105 tr|Q8FUL5|Q8FUL5_COREF Tax_Id=152794 SubName: Full=Putative DNA ... 384 e-104 tr|C8NRV4|C8NRV4_COREF Tax_Id=196164 (dnaN)SubName: Full=DNA pol... 384 e-104 tr|Q9ZB90|Q9ZB90_MYCAV Tax_Id=1764 (dnaN)SubName: Full=DnaN; Fla... 376 e-102 tr|C5V917|C5V917_9CORY Tax_Id=553207 (dnaN)SubName: Full=DNA pol... 374 e-101 tr|C0E1N3|C0E1N3_9CORY Tax_Id=566549 SubName: Full=Putative unch... 374 e-101 tr|Q0GNI3|Q0GNI3_9ZZZZ Tax_Id=155900 SubName: Full=Smu19B; Flags... 373 e-101 tr|Q8NUD6|Q8NUD6_CORGL Tax_Id=1718 (dnaN)SubName: Full=DNA polym... 371 e-101 tr|A4Q9S1|A4Q9S1_CORGB Tax_Id=340322 SubName: Full=Putative unch... 371 e-101 tr|C2CSS7|C2CSS7_CORST Tax_Id=525268 SubName: Full=DNA polymeras... 368 e-100 tr|C0U7U5|C0U7U5_9ACTO Tax_Id=526225 SubName: Full=DNA polymeras... 367 2e-99 tr|C3PE73|C3PE73_CORA7 Tax_Id=548476 (dnaN)SubName: Full=DNA pol... 366 2e-99 >sp|P46387|DPO3B_MYCLE Tax_Id=1769 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium leprae] Length = 399 Score = 755 bits (1949), Expect = 0.0 Identities = 386/399 (96%), Positives = 386/399 (96%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD Sbjct: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAEVQVAAEIA DITRALPNKPVHFYVDGNRVALTCGSARFSLPT Sbjct: 61 YEVSAEVQVAAEIASSGSVLVSGRLLSDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA Sbjct: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF Sbjct: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS Sbjct: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 Query: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG Sbjct: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 >tr|B8ZTN9|B8ZTN9_MYCLB Tax_Id=561304 (dnaN)SubName: Full=Putative DNA polymerase III, [beta] subunit; EC=2.7.7.7;[Mycobacterium leprae] Length = 399 Score = 755 bits (1949), Expect = 0.0 Identities = 386/399 (96%), Positives = 386/399 (96%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD Sbjct: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAEVQVAAEIA DITRALPNKPVHFYVDGNRVALTCGSARFSLPT Sbjct: 61 YEVSAEVQVAAEIASSGSVLVSGRLLSDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA Sbjct: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF Sbjct: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS Sbjct: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 Query: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG Sbjct: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 >sp|Q9L7L6|DPO3B_MYCPA Tax_Id=1770 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium paratuberculosis] Length = 399 Score = 632 bits (1629), Expect = e-179 Identities = 328/399 (82%), Positives = 342/399 (85%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T G SDLKF L RESFA AVSWVAK LP+RP VPVLSGVLL+G+D GLTISGFD Sbjct: 1 MDAATTTAGLSDLKFRLVRESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QVAAEIA DI RALPNKP+ FYVDGNRVAL CGSARFSLPT Sbjct: 61 YEVSAEAQVAAEIASPGSVLVSGRLLSDIVRALPNKPIDFYVDGNRVALNCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYPTLPTLP+ETGTLP+D+FAEAIGQVAIAAGRD TLPMLTGIR+EISGDTVVLAA Sbjct: 121 MAVEDYPTLPTLPEETGTLPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL WS S D EA+VLVPAKTL E A+ G DGS V LSLGAG GVGKDGL Sbjct: 181 TDRFRLAVRELTWSAASPDIEAAVLVPAKTLAEAARTGIDGSDVRLSLGAGAGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLPAEHTAVATI+VAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPAEHTAVATINVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F +G LRLSAGADDVGRAEEDLAV F GEPLTIAFNP YLTDGL SV SERVSFGFTTP Sbjct: 301 FSEGSLRLSAGADDVGRAEEDLAVDFAGEPLTIAFNPTYLTDGLGSVRSERVSFGFTTPG 360 Query: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S+DD P+ GPF ALPTDYVYLLMPVRLPG Sbjct: 361 KPALLRPASDDDSPPSGSGPFSALPTDYVYLLMPVRLPG 399 >tr|B2HI47|B2HI47_MYCMM Tax_Id=216594 (dnaN)SubName: Full=DNA polymerase III (Beta chain) DnaN;[Mycobacterium marinum] Length = 402 Score = 621 bits (1601), Expect = e-176 Identities = 324/402 (80%), Positives = 345/402 (85%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T G +DLKF L RESFA AVSWVAK LPTRP VPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAEV+V AEIA DITRALPNKPV FYVDGNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYPTLPTLP++TGTLP+++F+EAIGQVAIAAGRD TLPMLTGIR+EISG+ VVLAA Sbjct: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL W+ LS D EA+VLVPAKTL E AKA TDGS V LSLGAG+GVGKDGL Sbjct: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ DVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG+LRLSAGADDVGRAEED+AV F G+PLTIAFNP YL DGLAS+HSERVSFGFTTP Sbjct: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S +D P GPF A+PTDYVYLLMPVRLPG Sbjct: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 >tr|A0PKB3|A0PKB3_MYCUA Tax_Id=362242 (dnaN)SubName: Full=DNA polymerase III (Beta chain) DnaN;[Mycobacterium ulcerans] Length = 402 Score = 614 bits (1584), Expect = e-174 Identities = 321/402 (79%), Positives = 342/402 (85%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T G +DLKF L ESFA AVSWVAK LPTRP VPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRAGLTDLKFRLVPESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAEV+V AEIA DITRALP KPV FYVDGNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPKKPVDFYVDGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYPTLPTLP++TGTLP+++F+EAIGQVAI AGRD TLPMLTGIR+EISG+ VVLAA Sbjct: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAITAGRDDTLPMLTGIRVEISGEKVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL W+ LS D EA+VLVPAKTL E AKA TDGS V LSLGAG+GVGKDGL Sbjct: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ DVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG+LRLSAGADDVGRAEED+AV F G+PLTIAFNP YL DGLAS+HSERVSFGFTTP Sbjct: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S +D P GPF A+PTDYVYLLMPVRLPG Sbjct: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 >tr|A0Q8R7|A0Q8R7_MYCA1 Tax_Id=243243 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium avium] Length = 382 Score = 613 bits (1580), Expect = e-173 Identities = 317/381 (83%), Positives = 331/381 (86%) Query: 19 RESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAEIAXXXX 78 RESFA AVSWVAK LP+RP VPVLSGVLL+G+D GLTISGFDYEVSAE QVAAEIA Sbjct: 2 RESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFDYEVSAEAQVAAEIASPGS 61 Query: 79 XXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTLPDETGT 138 DI RALPNKP+ FYVDGNRVAL CGSARFSLPTMAVEDYPTLPTLP+ETGT Sbjct: 62 VLVSGRLLSDIVRALPNKPIDFYVDGNRVALNCGSARFSLPTMAVEDYPTLPTLPEETGT 121 Query: 139 LPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELKWSVLSS 198 LP+D+FAEAIGQVAIAAGRD TLPMLTGIR+EISGDTVVLAATDRFRLAVREL WS S Sbjct: 122 LPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAATDRFRLAVRELTWSAASP 181 Query: 199 DFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRSTTRLLDAEF 258 D EA+VLVPAKTL E A+ G DGS V LSLGAG GVGKDGL GISG GKRSTTRLLDAEF Sbjct: 182 DIEAAVLVPAKTLAEAARTGIDGSDVRLSLGAGAGVGKDGLLGISGNGKRSTTRLLDAEF 241 Query: 259 PKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSAGADDVGRA 318 PKFRQLLPAEHTAVATI+VAELTEAIKLVALVADRGAQVRMEF +G LRLSAGADDVGRA Sbjct: 242 PKFRQLLPAEHTAVATINVAELTEAIKLVALVADRGAQVRMEFSEGSLRLSAGADDVGRA 301 Query: 319 EEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSNDDVHPTHD 378 EEDLAV F GEPLTIAFNP YLTDGL SV SERVSFGFTTP KPALLRP S+DD P+ Sbjct: 302 EEDLAVDFAGEPLTIAFNPTYLTDGLGSVRSERVSFGFTTPGKPALLRPASDDDSPPSGS 361 Query: 379 GPFPALPTDYVYLLMPVRLPG 399 GPF ALPTDYVYLLMPVRLPG Sbjct: 362 GPFSALPTDYVYLLMPVRLPG 382 >sp|Q50790|DPO3B_MYCTU Tax_Id=1773 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 402 Score = 594 bits (1532), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|C6DQ77|C6DQ77_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis] Length = 402 Score = 594 bits (1532), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A5TY70|A5TY70_MYCTA Tax_Id=419947 (dnaN)SubName: Full=DNA polymerase III subunit beta DnaN;[Mycobacterium tuberculosis] Length = 402 Score = 594 bits (1532), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|Q9EVN6|Q9EVN6_MYCTU Tax_Id=1773 (dnaN)SubName: Full=DnaN;[Mycobacterium tuberculosis] Length = 402 Score = 594 bits (1532), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGTVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A5WI56|A5WI56_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase III beta subunit dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis] Length = 402 Score = 594 bits (1532), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A4KN34|A4KN34_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase III (Beta chain) dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis str. Haarlem] Length = 402 Score = 594 bits (1532), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A2VMU4|A2VMU4_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase III (Beta chain) dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis C] Length = 402 Score = 594 bits (1532), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >sp|O33914|DPO3B_MYCBO Tax_Id=1765 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 594 bits (1531), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|C1AIZ9|C1AIZ9_MYCBT Tax_Id=561275 (dnaN)SubName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 594 bits (1531), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A1KEE3|A1KEE3_MYCBP Tax_Id=410289 (dnaN_1)SubName: Full=DNA polymerase III subunit beta dnaN; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 594 bits (1531), Expect = e-168 Identities = 313/402 (77%), Positives = 332/402 (82%), Gaps = 3/402 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T VG +DL F L RESFA AVSWVAK LP RP VPVLSGVLLTGSD+GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QV AEI DITRALPNKPV +V+GNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYPTLPTLP+ETG LP+++FAEAI QVAIAAGRD TLPMLTGIR+EI G+TVVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVRELKWS S D EA+VLVPAKTL E AKAG GS V LSLG G GVGKDGL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLP EHTAVAT+DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F DG +RLSAGADDVGRAEEDL V + GEPLTIAFNP YLTDGL+S+ SERVSFGFTT Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 KPALLRP S DD +GPFPA+ TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A3PSD8|A3PSD8_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 586 bits (1511), Expect = e-165 Identities = 305/399 (76%), Positives = 335/399 (83%), Gaps = 1/399 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD+ T G +DLKF L RE FA AV+WVA+ LPTRPTVPVL+GVLLTG D GLTISGFD Sbjct: 1 MDVVPTTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAEV+VAAEIA DIT+ALP KPV V+G RV+LTCGSARFSLPT Sbjct: 61 YEVSAEVRVAAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYP LPTLPDETG + +D+FAEAIGQVA+AAGRD TLPMLTGIR+EI+G++VVLAA Sbjct: 121 MAVEDYPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL WS S D EA+VLVPAKTL E AKAGTDG+ V L+LGAG VGK+GL Sbjct: 181 TDRFRLAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GI GKRSTTRLLDAEFPKFRQLLP+EHTAVATI VAELTEAIK VALVADRGAQVRME Sbjct: 241 GIRSEGKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F D +LRLSAGADDVGRAEEDLAVAF+GEPLTIAFNP YLTDGL S+HSERV+FGFTTPS Sbjct: 301 FADDVLRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPS 360 Query: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 +PA+LRP ++D GPFPAL TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPAGDEDT-GGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|Q1BG60|Q1BG60_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 585 bits (1507), Expect = e-165 Identities = 304/399 (76%), Positives = 334/399 (83%), Gaps = 1/399 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD+ T G +DLKF L RE FA AV+WVA+ LPTRPTVPVL+GVLLTG D GLTISGFD Sbjct: 1 MDVVPTTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAEV+V AEIA DIT+ALP KPV V+G RV+LTCGSARFSLPT Sbjct: 61 YEVSAEVRVVAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYP LPTLPDETG + +D+FAEAIGQVA+AAGRD TLPMLTGIR+EI+G++VVLAA Sbjct: 121 MAVEDYPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL WS S D EA+VLVPAKTL E AKAGTDG+ V L+LGAG VGK+GL Sbjct: 181 TDRFRLAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GI GKRSTTRLLDAEFPKFRQLLP+EHTAVATI VAELTEAIK VALVADRGAQVRME Sbjct: 241 GIRSEGKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F D +LRLSAGADDVGRAEEDLAVAF+GEPLTIAFNP YLTDGL S+HSERV+FGFTTPS Sbjct: 301 FADDVLRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPS 360 Query: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 +PA+LRP ++D GPFPAL TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPAGDEDT-GGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|A1U8S1|A1U8S1_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 585 bits (1507), Expect = e-165 Identities = 304/399 (76%), Positives = 334/399 (83%), Gaps = 1/399 (0%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD+ T G +DLKF L RE FA AV+WVA+ LPTRPTVPVL+GVLLTG D GLTISGFD Sbjct: 1 MDVVPTTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAEV+V AEIA DIT+ALP KPV V+G RV+LTCGSARFSLPT Sbjct: 61 YEVSAEVRVVAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYP LPTLPDETG + +D+FAEAIGQVA+AAGRD TLPMLTGIR+EI+G++VVLAA Sbjct: 121 MAVEDYPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL WS S D EA+VLVPAKTL E AKAGTDG+ V L+LGAG VGK+GL Sbjct: 181 TDRFRLAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GI GKRSTTRLLDAEFPKFRQLLP+EHTAVATI VAELTEAIK VALVADRGAQVRME Sbjct: 241 GIRSEGKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRME 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F D +LRLSAGADDVGRAEEDLAVAF+GEPLTIAFNP YLTDGL S+HSERV+FGFTTPS Sbjct: 301 FADDVLRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPS 360 Query: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 +PA+LRP ++D GPFPAL TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPAGDEDT-GGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|A1T103|A1T103_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 398 Score = 578 bits (1490), Expect = e-163 Identities = 298/394 (75%), Positives = 328/394 (83%) Query: 6 TNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSA 65 T G +DLKF L RE FA AV+WVA+ LP+RPTVPVL+GVLLTGSD GLTISGFDYEVSA Sbjct: 5 TTAGLTDLKFRLTREDFADAVAWVARNLPSRPTVPVLAGVLLTGSDEGLTISGFDYEVSA 64 Query: 66 EVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVED 125 EVQ+ AEIA DI RALP KPV V+G RV+LTCGSARFSLPTM VED Sbjct: 65 EVQIPAEIASPGSVLVSGRLLSDIVRALPAKPVDVSVEGTRVSLTCGSARFSLPTMPVED 124 Query: 126 YPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFR 185 YPTLPTLPDETG + SD+FAEAIGQVA+AAGRD TLPMLTGIR+EISG+ VVLAATDRFR Sbjct: 125 YPTLPTLPDETGVVSSDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGEKVVLAATDRFR 184 Query: 186 LAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGISGG 245 LAVREL WS ++ EA+VLVPAKTL E AKAGTDG+ V L+LGAG VGK+GL GI Sbjct: 185 LAVRELTWSTGAAGVEAAVLVPAKTLAEAAKAGTDGNEVHLALGAGPSVGKEGLLGIRSK 244 Query: 246 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGI 305 GKRSTTRLLDAEFPKFRQLLP EHTA+ATI VAELTEAIK VALVADRGAQVRMEF DG+ Sbjct: 245 GKRSTTRLLDAEFPKFRQLLPTEHTAIATIGVAELTEAIKRVALVADRGAQVRMEFADGV 304 Query: 306 LRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALL 365 LRLSAGADDVGRAEEDL V F+G+PLTIAFNP YLTDGL+S+H+ERV+FGFTTPS+PA+L Sbjct: 305 LRLSAGADDVGRAEEDLPVEFSGDPLTIAFNPTYLTDGLSSLHAERVTFGFTTPSRPAVL 364 Query: 366 RPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 RP + DD GPFPA TDYVYLLMPVRLPG Sbjct: 365 RPAAEDDGGAGGSGPFPAAQTDYVYLLMPVRLPG 398 >sp|P52851|DPO3B_MYCSM Tax_Id=1772 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 397 Score = 576 bits (1484), Expect = e-162 Identities = 295/397 (74%), Positives = 327/397 (82%) Query: 3 LAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYE 62 +A T G +DLKF + RE FA AV+WVA+ LPTRPT+PVL+GVLLTG+D GLTISGFDYE Sbjct: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 Query: 63 VSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMA 122 VSAEV+V+AEIA DIT+ALP KPV V+G RV+LTCGSARFSLPT+A Sbjct: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 Query: 123 VEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATD 182 VEDYP LP LP+ETG + SD+FAEAIGQVA+AAGRD TLPMLTGIR+EISG++VVLAATD Sbjct: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 Query: 183 RFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGI 242 RFRLAVREL W + D EA+VLVPAKTL E AKAGTDG+ V L+LG+G VGKDGL GI Sbjct: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 Query: 243 SGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFG 302 GKRSTTRLLDAEFPKFRQLLPAEHTAVATI VAELTEAIK VALVADRGAQ+RMEF Sbjct: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 Query: 303 DGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKP 362 D L+LSAGADDVGRAEEDL V F GEPLTIAFNP YLTDGL S+HSERV+FGFTTPS+P Sbjct: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 Query: 363 ALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 A+LRP DD GPFPA TDYVYLLMPVRLPG Sbjct: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 >tr|A0QND6|A0QND6_MYCS2 Tax_Id=246196 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 397 Score = 576 bits (1484), Expect = e-162 Identities = 295/397 (74%), Positives = 327/397 (82%) Query: 3 LAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYE 62 +A T G +DLKF + RE FA AV+WVA+ LPTRPT+PVL+GVLLTG+D GLTISGFDYE Sbjct: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 Query: 63 VSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMA 122 VSAEV+V+AEIA DIT+ALP KPV V+G RV+LTCGSARFSLPT+A Sbjct: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 Query: 123 VEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATD 182 VEDYP LP LP+ETG + SD+FAEAIGQVA+AAGRD TLPMLTGIR+EISG++VVLAATD Sbjct: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 Query: 183 RFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGI 242 RFRLAVREL W + D EA+VLVPAKTL E AKAGTDG+ V L+LG+G VGKDGL GI Sbjct: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 Query: 243 SGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFG 302 GKRSTTRLLDAEFPKFRQLLPAEHTAVATI VAELTEAIK VALVADRGAQ+RMEF Sbjct: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 Query: 303 DGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKP 362 D L+LSAGADDVGRAEEDL V F GEPLTIAFNP YLTDGL S+HSERV+FGFTTPS+P Sbjct: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 Query: 363 ALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 A+LRP DD GPFPA TDYVYLLMPVRLPG Sbjct: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 >tr|A4T4T7|A4T4T7_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 398 Score = 573 bits (1477), Expect = e-161 Identities = 294/394 (74%), Positives = 327/394 (82%) Query: 6 TNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSA 65 T G SDLKF L RE FA AV+WVA+ LP+RPTVPVL+GVLLTGSD GLT+SGFDYEVSA Sbjct: 5 TTAGLSDLKFRLTREDFADAVAWVARNLPSRPTVPVLAGVLLTGSDEGLTVSGFDYEVSA 64 Query: 66 EVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVED 125 EVQ+ AEIA DI R+LP KPV V+G RV+LTCGSARFSLPTMAVED Sbjct: 65 EVQIPAEIASPGSVLVSGRLLSDIVRSLPAKPVDVSVEGTRVSLTCGSARFSLPTMAVED 124 Query: 126 YPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFR 185 YPTLPTLPDETG + +D+FAEAIGQVA+AAGRD TLPMLTGIR+EISG+ VVLAATDRFR Sbjct: 125 YPTLPTLPDETGVVSADLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGEKVVLAATDRFR 184 Query: 186 LAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGISGG 245 LAVREL WS ++ EA+VLVPAKTL E AKAGTDG+ V L+LG G VGK+GL GI Sbjct: 185 LAVRELTWSAGAAGVEAAVLVPAKTLAEAAKAGTDGTEVHLALGQGPTVGKEGLLGIRSK 244 Query: 246 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGI 305 GKRSTTRLLDAEFPKFRQLLP EHTA+ATI VAELTEAIK VALVADRGAQVRMEF D + Sbjct: 245 GKRSTTRLLDAEFPKFRQLLPTEHTAIATIGVAELTEAIKRVALVADRGAQVRMEFADDV 304 Query: 306 LRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALL 365 LRLSAGADDVGRAEEDL V F+G+PLTIAFNP+YLTDGL S+H+ERV+FGFTTPS+PA+L Sbjct: 305 LRLSAGADDVGRAEEDLPVQFSGDPLTIAFNPSYLTDGLGSLHAERVTFGFTTPSRPAVL 364 Query: 366 RPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 RP +DD GP+PA TDYVYLLMPVRLPG Sbjct: 365 RPAGDDDGSAAGSGPYPAAQTDYVYLLMPVRLPG 398 >tr|B1MDH7|B1MDH7_MYCA9 Tax_Id=561007 (dnaN)SubName: Full=DNA polymerase III, beta subunit (DnaN);[Mycobacterium abscessus] Length = 399 Score = 537 bits (1384), Expect = e-151 Identities = 271/399 (67%), Positives = 320/399 (80%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MDLA + LKF +AR+ FA +V+WVA+ LP+RPTVPVL+GVLLT D+GLT+SGFD Sbjct: 1 MDLASPTAADTSLKFRVARDDFADSVAWVARSLPSRPTVPVLAGVLLTAHDTGLTLSGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSA+V+V AE+A DITR+LPNKPV ++G R+ ++CGSA+FSLP+ Sbjct: 61 YEVSAQVKVPAEVAAAGNALVSGRLLSDITRSLPNKPVDVALEGTRLLISCGSAKFSLPS 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 M VEDYP LP+LP+ETG L +DVF+EAIGQVA+AAG+D TLPMLTGIR+EI+GDTVVLAA Sbjct: 121 MPVEDYPALPSLPEETGALGADVFSEAIGQVAVAAGKDDTLPMLTGIRVEINGDTVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL W+ S + A+VLVPAKTL E AK+ + GS V L+LGAG +G +GL Sbjct: 181 TDRFRLAVRELNWTSGSGETSAAVLVPAKTLSEAAKSASSGSDVQLALGAGSAIGSEGLL 240 Query: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 GI GKRSTTRLLDAEFPKFRQLLP EHTA+ATI ++EL EAIK VALVADRGAQ+R+E Sbjct: 241 GIVSDGKRSTTRLLDAEFPKFRQLLPTEHTALATIAISELVEAIKRVALVADRGAQIRLE 300 Query: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 F G+LRLSAGADDVGRAEE+L V F GEPLTIAFNP YLTDGL S+HS RV+FGFTTPS Sbjct: 301 FEPGLLRLSAGADDVGRAEEELEVEFVGEPLTIAFNPTYLTDGLGSLHSNRVTFGFTTPS 360 Query: 361 KPALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 +PA+LRP +D P GPF A TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPADDDQSSPEGSGPFTAAQTDYVYLLMPVRLPG 399 >tr|C2AIV3|C2AIV3_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 387 Score = 493 bits (1268), Expect = e-137 Identities = 251/387 (64%), Positives = 294/387 (75%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 +KF + E FA +V+WVA+ LP+RP VPVL GVLLT D GLT+SGFDYEVSA+V+V AE Sbjct: 1 MKFRVPHEEFAESVAWVARSLPSRPPVPVLGGVLLTAGDDGLTVSGFDYEVSAQVRVGAE 60 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 +A DIT+ALPNKPV +D RVA++CGSA+FSLPTM VEDYP LP L Sbjct: 61 VADEGQVLVSGRLLADITKALPNKPVDVELDVTRVAISCGSAKFSLPTMPVEDYPQLPEL 120 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P +TG + +FAEAI QVAIAAG+D TLPMLTGIR+EI G VVLAATDRFRLAVRE Sbjct: 121 PQQTGAIERSMFAEAISQVAIAAGKDDTLPMLTGIRVEIEGQRVVLAATDRFRLAVREFD 180 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRSTTR 252 W S D +A+VLVPAKTL E AK S V ++LGAG VG DGL G+ G +R+TTR Sbjct: 181 WQPQSGDVKAAVLVPAKTLSEAAKTFAGDSEVGIALGAGSAVGADGLLGVVGPDRRTTTR 240 Query: 253 LLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSAGA 312 LLDA+FPKFRQLLPA HTA+AT+++A L EAIK VALVADRGAQVRMEFGDG LRLSAG Sbjct: 241 LLDADFPKFRQLLPASHTAIATMEIAPLLEAIKRVALVADRGAQVRMEFGDGTLRLSAGG 300 Query: 313 DDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSNDD 372 DD G+AEE+L F GEPLTIAFNP YL DGLA++H++ V+FGFTTPS+PA+LRPT + Sbjct: 301 DDAGKAEEELPADFQGEPLTIAFNPGYLQDGLAAIHTDSVTFGFTTPSRPAVLRPTVENA 360 Query: 373 VHPTHDGPFPALPTDYVYLLMPVRLPG 399 P G FPA + Y YLLMPVRLPG Sbjct: 361 FQPDDSGAFPAPQSAYTYLLMPVRLPG 387 >tr|Q0SAG6|Q0SAG6_RHOSR Tax_Id=101510 (dnaN)SubName: Full=DNA-directed DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus sp.] Length = 394 Score = 486 bits (1251), Expect = e-135 Identities = 248/389 (63%), Positives = 301/389 (77%), Gaps = 2/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 LKF ++RE FA +V+WVA+ LP+RP VPVL GVLL ++ GLT+SGFDYEVSA+V+VAAE Sbjct: 6 LKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEQGLTVSGFDYEVSAQVRVAAE 65 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DIT++LPNKPV ++G RV +TCGSA+FSLPTM VEDYP LP L Sbjct: 66 VGSAGQVLVSGKLLADITKSLPNKPVDVTLEGTRVLITCGSAKFSLPTMPVEDYPQLPQL 125 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P +TG++P+DVF+EAI QVA+AAG+D TLPMLTGIR+EI + +VLAATDRFRLAVREL+ Sbjct: 126 PQQTGSIPADVFSEAISQVAVAAGKDDTLPMLTGIRVEIERNAIVLAATDRFRLAVRELE 185 Query: 193 WSVLSSDFEASVLVPAKTLVEVAK--AGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 WS + D A+VL+PAKTL E AK AG S V L+LG+G VG DGL GI G+R+T Sbjct: 186 WSPANPDTTAAVLIPAKTLSESAKTLAGDATSPVELALGSGSAVGNDGLLGIVNDGRRTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPKFRQLLP+EHTA+AT+++A L EAIK VALVA+RGAQVR++F L LSA Sbjct: 246 TRLLDAEFPKFRQLLPSEHTALATVEIAPLVEAIKRVALVAERGAQVRLQFSTEGLLLSA 305 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G DD GRAEE L F GEPLTIAFNP YL DGL+S+HSE+V FGFTTPS+PA+LRP + Sbjct: 306 GGDDAGRAEEGLNAVFQGEPLTIAFNPGYLIDGLSSLHSEQVLFGFTTPSRPAVLRPATE 365 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 D++ P G F A + Y YLLMPVRLPG Sbjct: 366 DEIEPDDSGNFAAPESAYTYLLMPVRLPG 394 >tr|C1B7S8|C1B7S8_RHOOB Tax_Id=632772 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 394 Score = 481 bits (1239), Expect = e-134 Identities = 246/389 (63%), Positives = 300/389 (77%), Gaps = 2/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 LKF ++RE FA +V+WVA+ LP+RP VPVL GVLL ++ GLT+SGFDYEVSA+V+VAAE Sbjct: 6 LKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEQGLTVSGFDYEVSAQVRVAAE 65 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DIT++LPNKPV ++G RV +TCGSA+FSLPTM VEDYP LP L Sbjct: 66 VGSAGQVLVSGKLLADITKSLPNKPVDVTLEGTRVLITCGSAKFSLPTMPVEDYPQLPQL 125 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P +TG++P+DVF+EAI QVA+AAG+D TLPMLTGIR+EI + +VLAATDRFRLAVREL+ Sbjct: 126 PQQTGSIPADVFSEAISQVAVAAGKDDTLPMLTGIRVEIERNAIVLAATDRFRLAVRELE 185 Query: 193 WSVLSSDFEASVLVPAKTLVEVAK--AGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 WS + D A+VL+PAKTL E AK AG S V L+LG+G VG DGL GI G+R+T Sbjct: 186 WSPANPDTTAAVLIPAKTLSESAKTLAGDATSPVELALGSGSAVGNDGLLGIVNDGRRTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPKFRQLLP+EHTA+AT+++A L EAIK VALVA+RGAQVR++F L LSA Sbjct: 246 TRLLDAEFPKFRQLLPSEHTALATVEIAPLVEAIKRVALVAERGAQVRLQFSTEGLLLSA 305 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G DD GRAEE L F GE LTIAFNP YL DGL+S+HSE+V FGFTTPS+PA+LRP + Sbjct: 306 GGDDAGRAEEGLNAVFQGESLTIAFNPGYLIDGLSSLHSEQVLFGFTTPSRPAVLRPATE 365 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 +++ P G F A + Y YLLMPVRLPG Sbjct: 366 EEIEPDDSGNFAAPESAYTYLLMPVRLPG 394 >tr|Q5Z3Z7|Q5Z3Z7_NOCFA Tax_Id=37329 (dnaN)SubName: Full=Putative DNA polymerase III beta subunit;[Nocardia farcinica] Length = 386 Score = 474 bits (1219), Expect = e-131 Identities = 247/388 (63%), Positives = 292/388 (75%), Gaps = 3/388 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 +KF +ARE FA +V+WVA+ LP+RP VPVL GVLL ++ GLT+SGFDYEVSA+++VAAE Sbjct: 1 MKFRVAREDFAESVAWVARSLPSRPPVPVLGGVLLVANEDGLTVSGFDYEVSAQMRVAAE 60 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 +A DIT+AL NKPV VDG RV +TCGSA+FSLPTM VEDYP LP + Sbjct: 61 VAGPGEVLVSGRLLADITKALSNKPVDVSVDGTRVLITCGSAKFSLPTMPVEDYPQLPEV 120 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P +TG L DVFAEA+GQVA+AAGRD TLPMLTGIR+EI G VVLAATDRFRLAVR ++ Sbjct: 121 PQQTGELSVDVFAEAVGQVAVAAGRDDTLPMLTGIRVEIEGSQVVLAATDRFRLAVRHIE 180 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKA-GTDGSGVCLSLGAGVGVGKDGLFGISGGGKRSTT 251 W+ D E +VL+PA+TL E AK G + V LSL G G G DGL GI G+R+TT Sbjct: 181 WTPARPDIETAVLIPARTLSEAAKTLGASDAPVQLSL--GTGAGSDGLLGIVNAGRRTTT 238 Query: 252 RLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSAG 311 RLLDAEFPKFRQLLP EHT+VAT+ VA LTEAIK VALVA+RGAQVR+EF L LSAG Sbjct: 239 RLLDAEFPKFRQLLPKEHTSVATLAVAALTEAIKRVALVAERGAQVRLEFSTEGLLLSAG 298 Query: 312 ADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSND 371 DD GRAEE L F GEPLTIAFNP YL DGL+++H++RV+FGFTTPS+PA+L P S + Sbjct: 299 GDDAGRAEEWLEADFRGEPLTIAFNPGYLVDGLSALHADRVTFGFTTPSRPAVLLPASEE 358 Query: 372 DVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + G F AL +Y YLLMPVRLPG Sbjct: 359 EPQTLDSGAFAALTGNYTYLLMPVRLPG 386 >tr|C0ZLE2|C0ZLE2_RHOE4 Tax_Id=234621 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 394 Score = 473 bits (1217), Expect = e-131 Identities = 240/389 (61%), Positives = 300/389 (77%), Gaps = 2/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 LKF ++RE FA +V+WVA+ LP+RP VPVL GVLL +++GLT+SGFDYEVSA+V+V+A+ Sbjct: 6 LKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEAGLTVSGFDYEVSAQVRVSAD 65 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DIT++LPNKPV ++G RV ++CGSA+FSLPTM VEDYP LPTL Sbjct: 66 VTTAGQALVSGRLLADITKSLPNKPVDVTLEGTRVLISCGSAKFSLPTMPVEDYPQLPTL 125 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P ++G++P D+F+EAI QVA+AAG+D TLPMLTGIR+EI +++VLAATDRFRLAVREL+ Sbjct: 126 PQQSGSIPVDLFSEAISQVAVAAGKDDTLPMLTGIRVEIEQNSIVLAATDRFRLAVRELE 185 Query: 193 WSVLSSDFEASVLVPAKTLVEVAK--AGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W+ + D +A+VL+PAKTL E AK AG S V L+LG+G +G DGL GI G+R+T Sbjct: 186 WTPANPDVQAAVLIPAKTLSESAKTLAGNANSPVELALGSGTTIGNDGLLGIVNDGRRTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPKFRQLLPA+HTA+AT++V L EAIK VALVA+RGAQVRM+F L LSA Sbjct: 246 TRLLDAEFPKFRQLLPAQHTAMATVEVTPLIEAIKRVALVAERGAQVRMQFSADGLLLSA 305 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G DD GRAEE L +F GE LTIAFNP YL DGL S+HSE V FGFTTPS+PA+LRP + Sbjct: 306 GGDDAGRAEETLNASFQGEALTIAFNPGYLIDGLNSLHSENVLFGFTTPSRPAVLRPAAE 365 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 ++ G F A ++Y YLLMPVRLPG Sbjct: 366 EEPTADESGNFAAPSSEYTYLLMPVRLPG 394 >tr|C3JLE0|C3JLE0_RHOER Tax_Id=596309 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Rhodococcus erythropolis SK121] Length = 403 Score = 473 bits (1217), Expect = e-131 Identities = 240/389 (61%), Positives = 300/389 (77%), Gaps = 2/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 LKF ++RE FA +V+WVA+ LP+RP VPVL GVLL +++GLT+SGFDYEVSA+V+V+A+ Sbjct: 15 LKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEAGLTVSGFDYEVSAQVRVSAD 74 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DIT++LPNKPV ++G RV ++CGSA+FSLPTM VEDYP LPTL Sbjct: 75 VTTAGQALVSGRLLADITKSLPNKPVDVTLEGTRVLISCGSAKFSLPTMPVEDYPQLPTL 134 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P ++G++P D+F+EAI QVA+AAG+D TLPMLTGIR+EI +++VLAATDRFRLAVREL+ Sbjct: 135 PQQSGSIPVDLFSEAISQVAVAAGKDDTLPMLTGIRVEIEQNSIVLAATDRFRLAVRELE 194 Query: 193 WSVLSSDFEASVLVPAKTLVEVAK--AGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W+ + D +A+VL+PAKTL E AK AG S V L+LG+G +G DGL GI G+R+T Sbjct: 195 WTPANPDVQAAVLIPAKTLSESAKTLAGNANSPVELALGSGTTIGNDGLLGIVNDGRRTT 254 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPKFRQLLPA+HTA+AT++V L EAIK VALVA+RGAQVRM+F L LSA Sbjct: 255 TRLLDAEFPKFRQLLPAQHTAMATVEVTPLIEAIKRVALVAERGAQVRMQFSADGLLLSA 314 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G DD GRAEE L +F GE LTIAFNP YL DGL S+HSE V FGFTTPS+PA+LRP + Sbjct: 315 GGDDAGRAEETLNASFQGEALTIAFNPGYLIDGLNSLHSENVLFGFTTPSRPAVLRPAAE 374 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 ++ G F A ++Y YLLMPVRLPG Sbjct: 375 EEPTADESGNFAAPSSEYTYLLMPVRLPG 403 >tr|D0LA34|D0LA34_9ACTO Tax_Id=526226 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Gordonia bronchialis DSM 43247] Length = 388 Score = 468 bits (1204), Expect = e-130 Identities = 245/389 (62%), Positives = 296/389 (76%), Gaps = 3/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 +KF +AR+ FA +V+WVA+ LP+RP VPVL V+L G+D GLTISGFDYEVSA+ +AAE Sbjct: 1 MKFRVARDEFADSVAWVARSLPSRPPVPVLGCVVL-GADDGLTISGFDYEVSAQESIAAE 59 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 IA DIT+ALPNKPV +DG RVA+ CGSA+FSLPTM VEDYP LP + Sbjct: 60 IAEPGQVLVSGRLLADITKALPNKPVDVTLDGARVAIACGSAKFSLPTMPVEDYPQLPDV 119 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P +GT+P+ +FAEAI QVAIAAGRD TLPMLTG+R+EI G TVVLAATDRFRLAVREL+ Sbjct: 120 PAISGTIPTQLFAEAISQVAIAAGRDDTLPMLTGVRVEIEGSTVVLAATDRFRLAVRELQ 179 Query: 193 WSVLSSDFEASVLVPAKTLVEVAK-AGTDGSGVC-LSLGAGVGVGKDGLFGISGGGKRST 250 W D +VLVPAKTL E AK AG +G+GV L+ G G +G DG+ GI G KR+T Sbjct: 180 WEPTDPDTSGAVLVPAKTLSESAKTAGAEGTGVVSLAFGNGSAIGNDGILGILGETKRTT 239 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPKFRQLLPA HTA+ATID A L EAIK VALVA+RGAQVR+EFG+G + L+A Sbjct: 240 TRLLDAEFPKFRQLLPASHTAIATIDSAPLIEAIKRVALVAERGAQVRLEFGEGSVLLTA 299 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G D+ G+AEE+L V F GE LTIAFNP YL DGL++++++ V FGFTTPS+PA+LRP+S Sbjct: 300 GGDEAGKAEEELPVQFAGEALTIAFNPGYLLDGLSAINADTVDFGFTTPSRPAVLRPSSG 359 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + G F A + + YLLMPVRLPG Sbjct: 360 EQPAADESGAFAAPESAFTYLLMPVRLPG 388 >tr|Q5YSM7|Q5YSM7_NOCFA Tax_Id=37329 (dnaN2)SubName: Full=Putative DNA polymerase III beta subunit;[Nocardia farcinica] Length = 381 Score = 417 bits (1071), Expect = e-114 Identities = 219/387 (56%), Positives = 272/387 (70%), Gaps = 8/387 (2%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 ++F +AR A A +WVA+ LP+RP VPVL G L D GLTIS FDYEVSA++++AAE Sbjct: 3 IRFRVARGDLADAATWVARSLPSRPPVPVLGGAHLRADDDGLTISVFDYEVSAQMRIAAE 62 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 +A DIT+ALPNKPV DG+RV + CGSA+FSLPTM VEDYP LP + Sbjct: 63 VAHDGEVLVSGKLLADITKALPNKPVDITFDGSRVLIACGSAKFSLPTMPVEDYPKLPDV 122 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P +G L +D+FA A+ QVA+AAGRD TLPMLTGIR+EI G V LAATDR+RLAVR L+ Sbjct: 123 PARSGELAADLFATAVSQVAVAAGRDDTLPMLTGIRVEIDGAEVTLAATDRYRLAVRTLE 182 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRSTTR 252 WS E VLVPA+TL E KA + L++ D +FG+ +R+TTR Sbjct: 183 WSPTDPSVETQVLVPARTLAEAVKALESAAPARLAI-------DDSMFGLVNARRRTTTR 235 Query: 253 LLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSAGA 312 LLDAEFPKFRQLLP EHT+VAT+ V +L +AIK VALVA+RGAQVR+EF + L LSAG Sbjct: 236 LLDAEFPKFRQLLPKEHTSVATVFVPDLVDAIKRVALVAERGAQVRLEFSEDGLLLSAGG 295 Query: 313 DDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSNDD 372 DD GRAEE + F GEPLTIAFNP YL DGL ++HS V+ GFTTP++PA+L P+ + + Sbjct: 296 DDAGRAEEAVPAEFRGEPLTIAFNPGYLMDGLTALHSTSVTLGFTTPTRPAVLVPSGDVE 355 Query: 373 VHPTHDGPFPALPTDYVYLLMPVRLPG 399 V + G F AL +VY+LMPVR+PG Sbjct: 356 VKES-SGGFAALSGPFVYMLMPVRIPG 381 >tr|A4F5N3|A4F5N3_SACEN Tax_Id=405948 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 374 Score = 408 bits (1048), Expect = e-112 Identities = 217/389 (55%), Positives = 270/389 (69%), Gaps = 17/389 (4%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDS-GLTISGFDYEVSAEVQVAA 71 +K + R+ A AV+WVA+ LP+RP VPVL GVLL S LTISGFDYEVSA+V + A Sbjct: 1 MKIRVERDGLADAVAWVARSLPSRPPVPVLGGVLLDASSGEALTISGFDYEVSAQVTIDA 60 Query: 72 EIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPT 131 I DIT+ALPN+PV VDG+RV +TCGS+RFSLPTM VEDYP LP Sbjct: 61 SIDSTGRTLVSGRLLADITKALPNRPVEITVDGSRVTITCGSSRFSLPTMPVEDYPELPA 120 Query: 132 LPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVREL 191 +PD G++P D+F+EA+ QVA+AAG+D TLPMLTG+R+EI+ D + + ATDRFRLA+RE Sbjct: 121 MPDHAGSVPGDLFSEAVSQVAVAAGKDDTLPMLTGVRMEINADRLTMVATDRFRLAMREF 180 Query: 192 KWSVLSSDFEASVLVPAKTLVEVAKA-GTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W ++ + SVLVPAKTL + AK GT G+ V +SL +G DGL G+SG +RST Sbjct: 181 TWEPGTTIEDTSVLVPAKTLSDSAKTLGTGGNKVEISLASG-----DGLLGLSGNSRRST 235 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPK+RQLLP+E A +DVA L EAIK V+LVA+RG QVR+EF D LRL+A Sbjct: 236 TRLLDAEFPKYRQLLPSESAVTAVVDVAPLVEAIKRVSLVAERGTQVRLEFSDAGLRLTA 295 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G DD G AEE+L V GE LTIAFNP YL DGL ++ S+R FTT ++PA+L+P Sbjct: 296 GGDDEGSAEEELPVELVGEALTIAFNPAYLLDGLGALKSDRAQMLFTTSNRPAVLKPVGE 355 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 D + Y+YLLMPVRLPG Sbjct: 356 DG----------EVAEGYLYLLMPVRLPG 374 >tr|C6WCF5|C6WCF5_ACTMD Tax_Id=446462 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Actinosynnema mirum] Length = 378 Score = 405 bits (1041), Expect = e-111 Identities = 217/393 (55%), Positives = 272/393 (69%), Gaps = 21/393 (5%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLT-----GSDSGLTISGFDYEVSAEV 67 +K + R+ A AV+WVA+ LP+RP VPVL GVLL GS LT+SGFDYEVSA+ Sbjct: 1 MKIRVERDGLADAVAWVARSLPSRPPVPVLGGVLLDAGAEDGSGDALTVSGFDYEVSAQC 60 Query: 68 QVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYP 127 V A I+ DIT+ALPN PV VDG R+ +TCGSA+FSLPTM VEDYP Sbjct: 61 GVPATISDGGKALVSGKLLADITKALPNHPVEINVDGARMTITCGSAKFSLPTMPVEDYP 120 Query: 128 TLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLA 187 LP++P G LP +VF EA+ QVA+AAG+D TLPMLTG+R+EI+ +VL ATDRFRLA Sbjct: 121 ALPSMPQLAGELPGEVFGEAVAQVAVAAGKDDTLPMLTGVRLEIADGKLVLVATDRFRLA 180 Query: 188 VRELKWSVLSSDFEASVLVPAKTLVEVAKA-GTDGSGVCLSLGAGVGVGKDGLFGISGGG 246 +RE +W+ + + +VLVPAKTL + AK G G+ + LSL A DGL G+SG G Sbjct: 181 MREFEWTPDETLGDVAVLVPAKTLNDSAKTLGASGAKIELSLAA-----NDGLLGLSGNG 235 Query: 247 KRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGIL 306 +R+TTRLLDA+FPK+RQLLP+EH+A A I V L +AIK V+LVA+RG QVR+EFGD L Sbjct: 236 RRTTTRLLDADFPKYRQLLPSEHSAAAIISVDTLVQAIKRVSLVAERGTQVRLEFGDAGL 295 Query: 307 RLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLR 366 +LSAG DD G AEE+L V + G+P+TIAFNP YL +GL +V + R FTTPS+PALL+ Sbjct: 296 KLSAGGDDEGSAEEELPVDYQGDPVTIAFNPTYLLEGLQAVRTPRAHLSFTTPSRPALLK 355 Query: 367 PTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 P + D + YVYLLMPVRLPG Sbjct: 356 PVNEDG----------EVAEGYVYLLMPVRLPG 378 >tr|C7MRN4|C7MRN4_SACVD Tax_Id=471857 SubName: Full=DNA polymerase III, beta subunit;[Saccharomonospora viridis] Length = 379 Score = 400 bits (1027), Expect = e-109 Identities = 215/395 (54%), Positives = 276/395 (69%), Gaps = 24/395 (6%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLL-TGSDSG-----LTISGFDYEVSAE 66 +K + R+ A AV+WVA+ LP+RP VPVL GVLL G DSG LTISGFDYEVSA Sbjct: 1 MKIRVERDGLAEAVAWVARSLPSRPPVPVLGGVLLDAGGDSGDGADTLTISGFDYEVSAT 60 Query: 67 VQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDY 126 V + IA DIT+ALP +PV V+G RV++TCG+A+FSLPTM VEDY Sbjct: 61 AGVPSTIAEGGRTLVSGRLLADITKALPAQPVDISVEGARVSITCGNAKFSLPTMPVEDY 120 Query: 127 PTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRL 186 P LP P+ G + D FA+A+ QVA+AAG+D TLPMLTG+R+EI+G T+ L ATDRFRL Sbjct: 121 PELPAQPELAGEVAGDAFAQAVAQVAVAAGKDDTLPMLTGMRVEITGSTLTLVATDRFRL 180 Query: 187 AVRELKWSVLSSDFEASVLVPAKTLVEVAKA-GTDGSGVCLSLGAGVGVGKDGLFGISGG 245 A+RE W +++VLVPA+TL + AK+ G+ G+ V + L G DGL G+SGG Sbjct: 181 AMREFSWQPAEGITDSAVLVPARTLADAAKSLGSAGTTVQIGLAGG-----DGLLGLSGG 235 Query: 246 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGI 305 GK +TTRL+DAEFP +RQLLP+++++ A + V LTEAIK V+LVA+RG QVR+EF DG Sbjct: 236 GKFTTTRLIDAEFPPYRQLLPSDYSSRAILHVPALTEAIKRVSLVAERGTQVRLEFEDGS 295 Query: 306 LRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALL 365 LRL+AG DD G AEE+L V + GEP+TIAFNP+YL DGL ++H+ER FTTP++PAL+ Sbjct: 296 LRLAAGGDDEGSAEEELPVDYEGEPVTIAFNPSYLADGLGALHAERAELTFTTPNRPALI 355 Query: 366 RPT-SNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 +P N +V P Y+YLLMPVRLPG Sbjct: 356 KPADDNGEVVP-----------GYLYLLMPVRLPG 379 >tr|B1VDX3|B1VDX3_CORU7 Tax_Id=504474 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium urealyticum] Length = 394 Score = 396 bits (1017), Expect = e-108 Identities = 201/390 (51%), Positives = 270/390 (69%), Gaps = 2/390 (0%) Query: 12 DLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAA 71 ++ F +A++ FASA++WVA+ LPT+PT P+L GV++ D GL +SGFD EVS V+V A Sbjct: 5 NVSFSVAKDDFASALAWVARALPTKPTQPILRGVMILADDDGLELSGFDREVSTRVRVNA 64 Query: 72 EIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPT 131 + DI ALP K + G+ V + S+RF LP M +EDYP LP Sbjct: 65 NVDEPGRILVAGKLASDIVGALPGKEITMEYSGSTVLVRSSSSRFELPAMTIEDYPVLPD 124 Query: 132 LPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVREL 191 +P TGT+ ++F EAI QVAIAAG+D TLPMLTGIR+EI G+ VVLAATDRFRLAVR Sbjct: 125 MPAVTGTIDPNLFTEAISQVAIAAGKDDTLPMLTGIRMEIEGENVVLAATDRFRLAVRSF 184 Query: 192 KWSVLSSDFEASVLVPAKTLVEVAKA--GTDGSGVCLSLGAGVGVGKDGLFGISGGGKRS 249 +W+ S+D +A +L+PA+TL + A+ + + +++G+G +G DGL GI +R+ Sbjct: 185 QWNPASADAKAELLIPARTLADTARTLDHSLNDPIEIAIGSGEDIGADGLLGIVTDARRT 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLS 309 TTRLLDA+FPKFR LLPA H A+A++++A L +AI+ V+LVA+R +Q+RM F + L LS Sbjct: 245 TTRLLDADFPKFRPLLPARHNAMASVEIAPLLDAIRRVSLVAERNSQIRMHFEESTLTLS 304 Query: 310 AGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTS 369 AG DVG+AEE L A+ GEPLTIAFNP YL DGL+++H+ERV FGFT PS+PA+L P Sbjct: 305 AGGSDVGQAEEVLNCAYHGEPLTIAFNPAYLKDGLSAIHTERVVFGFTQPSRPAILIPAP 364 Query: 370 NDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + DG FP T++ YLLMPVRLPG Sbjct: 365 AELPEAEEDGTFPDPETNFKYLLMPVRLPG 394 >tr|Q4JYF6|Q4JYF6_CORJK Tax_Id=306537 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium jeikeium] Length = 394 Score = 395 bits (1016), Expect = e-108 Identities = 194/389 (49%), Positives = 267/389 (68%), Gaps = 2/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 + F + ++ FASA+ WVA+ LP++PT P+L GV++ D GL +SGFD EVS V++ AE Sbjct: 6 VSFIVPKDDFASALGWVARSLPSKPTQPILRGVMIVADDEGLELSGFDREVSTRVRINAE 65 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DI +LPNKP++ DG V L G ++F LP M +EDYP LP L Sbjct: 66 VNEPGKILVAGKLASDIVGSLPNKPINIEFDGTTVILKTGKSKFELPAMTIEDYPVLPEL 125 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P+ TGT+ ++FAE+I QVA+AAGRD TLPMLTG+ +EI G+ V++ ATDRFRLAVR + Sbjct: 126 PEVTGTIDPNLFAESISQVAVAAGRDDTLPMLTGVHVEIDGENVIMVATDRFRLAVRSFQ 185 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKA--GTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W+ +D +A +L+PA+TL + A++ + + +++G+G +G DGL GIS + +T Sbjct: 186 WNPAQADAQAKLLIPARTLADTARSMDPNNTDPIEIAVGSGEDIGADGLLGISTESRHTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPKFR LLP HTA+A++++A L EAIK V++VA+R +Q+RM+F D + LSA Sbjct: 246 TRLLDAEFPKFRPLLPKTHTALASVEIAPLQEAIKRVSIVAERNSQIRMDFKDNTVTLSA 305 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G DVG A E L AF GEPL IAFNP+YL +GLA++H+ RV FGFT S+PA+L P Sbjct: 306 GGSDVGSATETLDCAFAGEPLVIAFNPSYLKEGLAAIHTPRVVFGFTMASRPAILLPDPG 365 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + +G F TD+ YLLMPVRLPG Sbjct: 366 ELPEADAEGNFATPETDFTYLLMPVRLPG 394 >tr|C8RVG0|C8RVG0_CORJE Tax_Id=525262 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium jeikeium ATCC 43734] Length = 394 Score = 395 bits (1016), Expect = e-108 Identities = 194/389 (49%), Positives = 267/389 (68%), Gaps = 2/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 + F + ++ FASA+ WVA+ LP++PT P+L GV++ D GL +SGFD EVS V++ AE Sbjct: 6 VSFIVPKDDFASALGWVARSLPSKPTQPILRGVMIVADDEGLELSGFDREVSTRVRINAE 65 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DI +LPNKP++ DG V L G ++F LP M +EDYP LP L Sbjct: 66 VNEPGKILVAGKLASDIVGSLPNKPINIEFDGTTVILKTGKSKFELPAMTIEDYPVLPEL 125 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P+ TGT+ ++FAE+I QVA+AAGRD TLPMLTG+ +EI G+ V++ ATDRFRLAVR + Sbjct: 126 PEVTGTIDPNLFAESISQVAVAAGRDDTLPMLTGVHVEIDGENVIMVATDRFRLAVRSFQ 185 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKA--GTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W+ +D +A +L+PA+TL + A++ + + +++G+G +G DGL GIS + +T Sbjct: 186 WNPAQADAQAKLLIPARTLADTARSMDPNNTDPIEIAVGSGEDIGADGLLGISTESRHTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFPKFR LLP HTA+A++++A L EAIK V++VA+R +Q+RM+F D + LSA Sbjct: 246 TRLLDAEFPKFRPLLPKTHTALASVEIAPLQEAIKRVSIVAERNSQIRMDFKDNTVTLSA 305 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G DVG A E L AF GEPL IAFNP+YL +GLA++H+ RV FGFT S+PA+L P Sbjct: 306 GGSDVGSATETLDCAFAGEPLVIAFNPSYLKEGLAAIHTPRVVFGFTMASRPAILLPDPG 365 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + +G F TD+ YLLMPVRLPG Sbjct: 366 ELPEADAEGNFATPETDFTYLLMPVRLPG 394 >tr|C4LGB1|C4LGB1_CORK4 Tax_Id=645127 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium kroppenstedtii] Length = 394 Score = 387 bits (994), Expect = e-105 Identities = 195/389 (50%), Positives = 264/389 (67%), Gaps = 2/389 (0%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 + F +A++ ++A+SWVA+ L ++PT P+L GV++T D GL ++GFDYEVS V+++AE Sbjct: 6 VSFRVAKDDLSAALSWVARSLASKPTQPILRGVMMTADDEGLLLAGFDYEVSTRVRISAE 65 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DI +LP+K V VDG +V +TCG + F LP M +EDYP LP+L Sbjct: 66 VLEPGQVLVAGKLANDIIGSLPHKDVAISVDGTKVHVTCGQSNFELPAMTIEDYPELPSL 125 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P+ETG + VF AIGQVA AAG+D ++PMLTGI++E+ GD VVLAATDRFRLAVRE Sbjct: 126 PEETGHIDPHVFTAAIGQVASAAGKDDSMPMLTGIKMEVKGDNVVLAATDRFRLAVREFT 185 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKAGTD--GSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W S D +A +L+PA+TL + A+ + L++GA VGKDGL GI +++T Sbjct: 186 WEPSSPDVDAEILIPARTLADSARTLDTRLNDPIQLAMGAAQDVGKDGLLGIVSENRQTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRL+DA+FPKFR LLP H+++A +++A L +AI+ V+LVA+R AQV++EF + L LSA Sbjct: 246 TRLIDADFPKFRPLLPKSHSSMAIVEIAPLLDAIRRVSLVAERNAQVKLEFSEDQLVLSA 305 Query: 311 GADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSN 370 G + G AEE L F GEPL IAFN NYL +GLAS+ ++ V FGFT PS+PA+L P Sbjct: 306 GGSEAGTAEETLPAQFAGEPLLIAFNANYLKEGLASIDTKNVVFGFTQPSRPAILIPEPE 365 Query: 371 DDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 DG FP T + YLLMPVRLPG Sbjct: 366 TMPEQDSDGQFPTPSTYFTYLLMPVRLPG 394 >tr|Q8FUL5|Q8FUL5_COREF Tax_Id=152794 SubName: Full=Putative DNA polymerase III beta subunit;[Corynebacterium efficiens] Length = 394 Score = 384 bits (985), Expect = e-104 Identities = 193/390 (49%), Positives = 266/390 (68%), Gaps = 2/390 (0%) Query: 12 DLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAA 71 ++ F +ARE ++V WVA+ LPT+PT PVL +L+T D GL ++G+DYEVS V+V+A Sbjct: 5 NVSFRVAREDLVTSVGWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYEVSTRVRVSA 64 Query: 72 EIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPT 131 E+A +I LPNKPV F +DG++V ++CGSA F LP++ ++DYP LP+ Sbjct: 65 EVAVPGRIAVAGKILSEIIGTLPNKPVDFRLDGSKVLVSCGSASFELPSIPLDDYPPLPS 124 Query: 132 LPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVREL 191 LP+ TG++ +F EA+ QVA AAGRD +LPMLTG+ +EI G+ + LAATDRFRLA+R Sbjct: 125 LPERTGSINPKLFTEAVTQVASAAGRDDSLPMLTGVNMEIHGNQISLAATDRFRLALRTF 184 Query: 192 KWSVLSSDFEASVLVPAKTLVEVAKAGTDG--SGVCLSLGAGVGVGKDGLFGISGGGKRS 249 +W SS EA +L+PAKTL+E A+ G + +++G G VG++GLFGI + S Sbjct: 185 EWDPASSGIEAKLLIPAKTLLENARTLDTGLNEEIGIAVGTGEQVGREGLFGIRTDNRES 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLS 309 TTR+LDA+FP + LLP EHTA+A++++A L +A++ V+LVADR AQ+ MEF DG + LS Sbjct: 245 TTRMLDADFPNIQPLLPKEHTAIASVEIAPLLDAVRRVSLVADRNAQIIMEFSDGQVILS 304 Query: 310 AGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTS 369 AG D G A+E L AFTG+ L IAFNP YL DGL+ + + R FGFT PS+PA++ P Sbjct: 305 AGGSDAGHAQEVLPCAFTGKDLKIAFNPGYLKDGLSVIPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 NDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + G F T + YLLMPVRLPG Sbjct: 365 EEFPEADERGVFQTPDTYFTYLLMPVRLPG 394 >tr|C8NRV4|C8NRV4_COREF Tax_Id=196164 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium efficiens YS-314] Length = 394 Score = 384 bits (985), Expect = e-104 Identities = 193/390 (49%), Positives = 266/390 (68%), Gaps = 2/390 (0%) Query: 12 DLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAA 71 ++ F +ARE ++V WVA+ LPT+PT PVL +L+T D GL ++G+DYEVS V+V+A Sbjct: 5 NVSFRVAREDLVTSVGWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYEVSTRVRVSA 64 Query: 72 EIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPT 131 E+A +I LPNKPV F +DG++V ++CGSA F LP++ ++DYP LP+ Sbjct: 65 EVAVPGRIAVAGKILSEIIGTLPNKPVDFRLDGSKVLVSCGSASFELPSIPLDDYPPLPS 124 Query: 132 LPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVREL 191 LP+ TG++ +F EA+ QVA AAGRD +LPMLTG+ +EI G+ + LAATDRFRLA+R Sbjct: 125 LPERTGSINPKLFTEAVTQVASAAGRDDSLPMLTGVNMEIHGNQISLAATDRFRLALRTF 184 Query: 192 KWSVLSSDFEASVLVPAKTLVEVAKAGTDG--SGVCLSLGAGVGVGKDGLFGISGGGKRS 249 +W SS EA +L+PAKTL+E A+ G + +++G G VG++GLFGI + S Sbjct: 185 EWDPASSGIEAKLLIPAKTLLENARTLDTGLNEEIGIAVGTGEQVGREGLFGIRTDNRES 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLS 309 TTR+LDA+FP + LLP EHTA+A++++A L +A++ V+LVADR AQ+ MEF DG + LS Sbjct: 245 TTRMLDADFPNIQPLLPKEHTAIASVEIAPLLDAVRRVSLVADRNAQIIMEFSDGQVILS 304 Query: 310 AGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTS 369 AG D G A+E L AFTG+ L IAFNP YL DGL+ + + R FGFT PS+PA++ P Sbjct: 305 AGGSDAGHAQEVLPCAFTGKDLKIAFNPGYLKDGLSVIPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 NDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + G F T + YLLMPVRLPG Sbjct: 365 EEFPEADERGVFQTPDTYFTYLLMPVRLPG 394 >tr|Q9ZB90|Q9ZB90_MYCAV Tax_Id=1764 (dnaN)SubName: Full=DnaN; Flags: Fragment;[Mycobacterium avium] Length = 258 Score = 376 bits (966), Expect = e-102 Identities = 197/258 (76%), Positives = 208/258 (80%) Query: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 MD A T G SDLKF L RESFA AVSWVAK LP+RP VPVLSGVLL+G+D GLTISGFD Sbjct: 1 MDAATTTAGLSDLKFRLVRESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFD 60 Query: 61 YEVSAEVQVAAEIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 YEVSAE QVAAEIA DI RALPNKP+ FYVDGN+VAL CGSARFSLPT Sbjct: 61 YEVSAEAQVAAEIASPGSVLVSGRLLSDIVRALPNKPIDFYVDGNQVALNCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 MAVEDYPTLPTLP+ETGTLP+D+FAEAIGQVAIAAGRD TLPMLTGIR+EISGDTVVLAA Sbjct: 121 MAVEDYPTLPTLPEETGTLPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAA 180 Query: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 TDRFRLAVREL WS S D EA+VLVPAKTL E A+ G DGS V G GKDGL Sbjct: 181 TDRFRLAVRELTWSAASPDIEAAVLVPAKTLAEAARTGIDGSDVRCRWGRAQVCGKDGLL 240 Query: 241 GISGGGKRSTTRLLDAEF 258 GISG GKRSTTRLLDAEF Sbjct: 241 GISGNGKRSTTRLLDAEF 258 >tr|C5V917|C5V917_9CORY Tax_Id=553207 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium matruchotii ATCC 14266] Length = 418 Score = 374 bits (960), Expect = e-101 Identities = 195/391 (49%), Positives = 255/391 (65%), Gaps = 4/391 (1%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 + F +A+E ASAVSWVA+ LPT+P PVL +L+T D GL +GFDYEVS +V++ AE Sbjct: 28 VSFVVAKEDLASAVSWVARNLPTKPAQPVLRAMLITADDDGLEFAGFDYEVSTKVRIPAE 87 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DIT LPNKPV +VDG+ V L CGS+RF LP++ ++DYPTLPTL Sbjct: 88 VNQPGRIAVAGKLIADITATLPNKPVEIFVDGSTVQLKCGSSRFELPSIPLDDYPTLPTL 147 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P+ TG + +F +A+ QVA AAG+D TLPMLTG+ +EI G+ + L ATDRFRLA+R + Sbjct: 148 PEVTGAINPRLFIDAVTQVATAAGKDDTLPMLTGVHMEIEGEDITLTATDRFRLALRRFQ 207 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKA--GTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W D +A +L+PAK VE A+ V +++G+G +G +GLFGI +++T Sbjct: 208 WIPAFPDAQAKLLIPAKNFVENARTLDANSTEPVEIAVGSGDSIGAEGLFGIHVDARQTT 267 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFP LLP H +A+++++ L +AIK VALVADR AQ+RM F G + LSA Sbjct: 268 TRLLDAEFPNVNPLLPKFHKCLASVEISSLQDAIKRVALVADRNAQIRMHFTPGEVLLSA 327 Query: 311 GADDVGRAEEDLAVAFTG--EPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPT 368 G D G AEE + F G E L IAFNP YL DGL V ++RV FGFT S+PA+L P Sbjct: 328 GGSDAGHAEESVPCEFIGTEEELLIAFNPAYLRDGLHVVRTQRVVFGFTESSRPAILIPE 387 Query: 369 SNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 DG +P TD+ YLLMPVRLPG Sbjct: 388 PEKLPELNDDGLYPTPDTDFTYLLMPVRLPG 418 >tr|C0E1N3|C0E1N3_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 396 Score = 374 bits (960), Expect = e-101 Identities = 195/391 (49%), Positives = 255/391 (65%), Gaps = 4/391 (1%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 + F +A+E ASAVSWVA+ LPT+P PVL +L+T D GL +GFDYEVS +V++ AE Sbjct: 6 VSFVVAKEDLASAVSWVARNLPTKPAQPVLRAMLITADDDGLEFAGFDYEVSTKVRIPAE 65 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DIT LPNKPV +VDG+ V L CGS+RF LP++ ++DYPTLPTL Sbjct: 66 VNQPGRIAVAGKLIADITATLPNKPVEIFVDGSTVQLKCGSSRFELPSIPLDDYPTLPTL 125 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P+ TG + +F +A+ QVA AAG+D TLPMLTG+ +EI G+ + L ATDRFRLA+R + Sbjct: 126 PEVTGAINPRLFIDAVTQVATAAGKDDTLPMLTGVHMEIEGEDITLTATDRFRLALRRFQ 185 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKA--GTDGSGVCLSLGAGVGVGKDGLFGISGGGKRST 250 W D +A +L+PAK VE A+ V +++G+G +G +GLFGI +++T Sbjct: 186 WIPAFPDAQAKLLIPAKNFVENARTLDANSTEPVEIAVGSGDSIGAEGLFGIHVDARQTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TRLLDAEFP LLP H +A+++++ L +AIK VALVADR AQ+RM F G + LSA Sbjct: 246 TRLLDAEFPNVNPLLPKFHKCLASVEISSLQDAIKRVALVADRNAQIRMHFTPGEVLLSA 305 Query: 311 GADDVGRAEEDLAVAFTG--EPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPT 368 G D G AEE + F G E L IAFNP YL DGL V ++RV FGFT S+PA+L P Sbjct: 306 GGSDAGHAEESVPCEFIGTEEELLIAFNPAYLRDGLHVVRTQRVVFGFTESSRPAILIPE 365 Query: 369 SNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 DG +P TD+ YLLMPVRLPG Sbjct: 366 PEKLPELNDDGLYPTPDTDFTYLLMPVRLPG 396 >tr|Q0GNI3|Q0GNI3_9ZZZZ Tax_Id=155900 SubName: Full=Smu19B; Flags: Fragment;[uncultured organism] Length = 357 Score = 373 bits (958), Expect = e-101 Identities = 195/359 (54%), Positives = 244/359 (67%), Gaps = 7/359 (1%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 +KF +AR+ A AV+WVAK LP+RP VPVL G+LL LT+SGFDYEVS +++ + Sbjct: 1 MKFRVARDDLADAVAWVAKSLPSRPPVPVLGGILLEVDGGTLTVSGFDYEVSTRAELSVD 60 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 +ITRALP KPV F VDG+RV++ GSARF+LPTM V+DYP LP + Sbjct: 61 AEDDGRVLVSGRLLSEITRALPAKPVDFAVDGSRVSIVGGSARFTLPTMPVDDYPPLPEM 120 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P +GT+ S AEA+ Q +AAGRD TLPMLTGIR+EI GD + LAATDRFRLAVREL Sbjct: 121 PAGSGTVESAALAEAVAQSVVAAGRDDTLPMLTGIRVEIEGDKLTLAATDRFRLAVRELG 180 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRSTTR 252 W+ + D +VLVPA+TL + AK + V ++LG DGL G+ GG+R+T R Sbjct: 181 WTPDTPDMSTAVLVPARTLSDAAKTLGGAASVIVALG-------DGLLGLQAGGRRTTVR 233 Query: 253 LLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSAGA 312 LLD EF K+R LLP+EHT + V+EL EAI+ VALV DRG +RM+ DG+L L+AG Sbjct: 234 LLDVEFVKYRSLLPSEHTTTVDVPVSELVEAIRRVALVTDRGHHLRMQVTDGLLTLTAGG 293 Query: 313 DDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTSND 371 DD G+AEE+L V G L IAFNP YL DGL +HSERV FTTPS+PALL P +D Sbjct: 294 DDEGKAEEELPVEADGAELLIAFNPGYLIDGLGVLHSERVRMAFTTPSRPALLLPMDSD 352 >tr|Q8NUD6|Q8NUD6_CORGL Tax_Id=1718 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7; SubName: Full=DNA POLYMERASE III, BETA SUBUNIT; EC=2.7.7.7;[Corynebacterium glutamicum] Length = 394 Score = 371 bits (953), Expect = e-101 Identities = 183/390 (46%), Positives = 266/390 (68%), Gaps = 2/390 (0%) Query: 12 DLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAA 71 ++ F +ARE +AV+WVA+ LPT+PT PVL +L+T D GL ++G+DY+VS V+++A Sbjct: 5 NVSFRVAREDLVTAVAWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYDVSTRVRLSA 64 Query: 72 EIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPT 131 E++ +IT +LPNKPV F +DG++ +TCGS+RF LP + ++DYP LP Sbjct: 65 EVSQPGRIAVAGKLLSEITGSLPNKPVDFRIDGSKAFVTCGSSRFELPLIPLDDYPMLPK 124 Query: 132 LPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVREL 191 LP TG++ + +F EA+ QVA AAG+D +LPMLTG+ +EI G+ + LAATDRFRLA+R Sbjct: 125 LPAGTGSINAKLFTEAVSQVASAAGKDDSLPMLTGVSMEIVGNQINLAATDRFRLALRTF 184 Query: 192 KWSVLSSDFEASVLVPAKTLVEVAKAGTDG--SGVCLSLGAGVGVGKDGLFGISGGGKRS 249 +W + +L+PA+TL++ A++ G + +++G G VG++GLFG+ + + Sbjct: 185 EWEANDPELNVKLLIPARTLLDNARSLDSGLNDSIDIAVGTGDQVGREGLFGVHTDNRET 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLS 309 TTRLLDA+FP LLP EHTA+A++++A L +AI+ V+LVA+R AQ+ + F +G + L+ Sbjct: 245 TTRLLDADFPNIAPLLPKEHTAIASVEIAPLVDAIRRVSLVAERNAQIVLHFSEGQVILT 304 Query: 310 AGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTS 369 AGA + G AEE L AFTG+ LTIAFNP YL DGL+ V + R FGFT PS+PA++ P Sbjct: 305 AGATEAGHAEETLPCAFTGKELTIAFNPGYLKDGLSVVPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 NDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + +G F T + YLLMPVRLPG Sbjct: 365 EEMPSANENGIFQTPDTYFTYLLMPVRLPG 394 >tr|A4Q9S1|A4Q9S1_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 394 Score = 371 bits (953), Expect = e-101 Identities = 183/390 (46%), Positives = 266/390 (68%), Gaps = 2/390 (0%) Query: 12 DLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAA 71 ++ F +ARE +AV+WVA+ LPT+PT PVL +L+T D GL ++G+DY+VS V+++A Sbjct: 5 NVSFRVAREDLVTAVAWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYDVSTRVRLSA 64 Query: 72 EIAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPT 131 E++ +IT +LPNKPV F +DG++ +TCGS+RF LP + ++DYP LP Sbjct: 65 EVSQPGRIAVAGKLLSEITGSLPNKPVDFRIDGSKAFVTCGSSRFELPLIPLDDYPMLPK 124 Query: 132 LPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVREL 191 LP TG++ + +F EA+ QVA AAG+D +LPMLTG+ +EI G+ + LAATDRFRLA+R Sbjct: 125 LPAGTGSINAKLFTEAVSQVASAAGKDDSLPMLTGVSMEIVGNQINLAATDRFRLALRTF 184 Query: 192 KWSVLSSDFEASVLVPAKTLVEVAKAGTDG--SGVCLSLGAGVGVGKDGLFGISGGGKRS 249 +W + +L+PA+TL++ A++ G + +++G G VG++GLFG+ + + Sbjct: 185 EWEANDPELNVKLLIPARTLLDNARSLDSGLNDSIDIAVGTGDQVGREGLFGVHTDNRET 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLS 309 TTRLLDA+FP LLP EHTA+A++++A L +AI+ V+LVA+R AQ+ + F +G + L+ Sbjct: 245 TTRLLDADFPNIAPLLPKEHTAIASVEIAPLVDAIRRVSLVAERNAQIVLHFSEGQVILT 304 Query: 310 AGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTS 369 AGA + G AEE L AFTG+ LTIAFNP YL DGL+ V + R FGFT PS+PA++ P Sbjct: 305 AGATEAGHAEETLPCAFTGKELTIAFNPGYLKDGLSVVPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 NDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + +G F T + YLLMPVRLPG Sbjct: 365 EEMPSANENGIFQTPDTYFTYLLMPVRLPG 394 >tr|C2CSS7|C2CSS7_CORST Tax_Id=525268 SubName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Corynebacterium striatum ATCC 6940] Length = 393 Score = 368 bits (944), Expect = e-100 Identities = 191/390 (48%), Positives = 259/390 (66%), Gaps = 4/390 (1%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 + F +A++ A+AV+WVA+ LP++ T PVL +L+T D+GL +GFDYEVS V++AA Sbjct: 5 VSFRVAKDDLANAVAWVARSLPSKVTQPVLRAMLITADDNGLEFTGFDYEVSTRVRIAAM 64 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DI +LPNK V ++V LTCGS+RF LP + ++DYP LP L Sbjct: 65 VDEPGRIAVAGKLLADIVASLPNKEVEMTQQDSKVLLTCGSSRFELPVIPLDDYPQLPVL 124 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P+ TGT+ +F EAI QVA AAG+D TLPMLTG+ +EI G V + ATDRFRLA+R + Sbjct: 125 PEVTGTVNPQLFVEAISQVASAAGKDDTLPMLTGVHMEIHGSHVEMTATDRFRLAMRTFE 184 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVG--VGKDGLFGISGGGKRST 250 W S D EA +LVPAKTL + ++ + + + G G +G +GLFG+ + +T Sbjct: 185 WEPTSPDVEAKLLVPAKTLQDTGRSLDTHLNIPVEIAVGTGENIGAEGLFGLHADNRETT 244 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TR+LDA+FP LLP HTA+A+I+VA L EAI+ V+L+ DR AQ+RMEF +G + L+A Sbjct: 245 TRMLDADFPNVSPLLPKTHTAMASIEVAPLQEAIRRVSLLTDRNAQIRMEFSEGQVTLAA 304 Query: 311 GADDVGRAEEDLAVAFTG-EPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTS 369 GAD G+A+E L AFTG + IAFNP+YL DGLA VH++RV FGFT PS+PA++ P Sbjct: 305 GADS-GKADETLPCAFTGRDEFVIAFNPSYLKDGLAVVHTDRVVFGFTEPSRPAIMIPEP 363 Query: 370 NDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + DG FP T++ YLLMPVRLPG Sbjct: 364 EEMPLADEDGVFPTPETNFTYLLMPVRLPG 393 >tr|C0U7U5|C0U7U5_9ACTO Tax_Id=526225 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Geodermatophilus obscurus DSM 43160] Length = 390 Score = 367 bits (941), Expect = 2e-99 Identities = 201/393 (51%), Positives = 259/393 (65%), Gaps = 13/393 (3%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 +KF +ARE A AV+W A+ LP RP+VPVL+G+LL S L++SGFDYEVSA +V + Sbjct: 5 MKFRVAREVLADAVAWTARSLPPRPSVPVLAGILLEVDGSQLSVSGFDYEVSARAEVDVQ 64 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 +ITRALP PV +G R++++CG+ARFSLPT+ VEDYP+LP + Sbjct: 65 ATESGRVLVPGRLLAEITRALPPHPVDLTAEGPRLSISCGNARFSLPTLPVEDYPSLPAM 124 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P G + SDVFAEA+GQVA+AAGRD TLPMLTG+R+EI D V LAATDR+RLAVRE Sbjct: 125 PSSAGVVDSDVFAEAVGQVAVAAGRDDTLPMLTGVRLEIEDDLVTLAATDRYRLAVREFA 184 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGISGGGKRSTTR 252 W + +VLVPA+TL + AK T G + LSL + G +G+ G+SG +++TTR Sbjct: 185 WRPDTPGLTTAVLVPARTLADAAKTLTSGPEITLSLSS--GSSGEGILGLSGKDRQTTTR 242 Query: 253 LLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA-G 311 LLDAEF K+R ++P E + AT+ V T+A K VALVA+RG +R EF G + L A G Sbjct: 243 LLDAEFVKYRAIMPNESASNATLPVGLFTDAAKRVALVAERGTPLRCEFTPGQVTLRAGG 302 Query: 312 ADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALL----RP 367 DD G+AEE V F GEPLTI FNP +L DGLA+VH+ R FT+P KPA+L P Sbjct: 303 TDDEGQAEERCDVEFEGEPLTIGFNPTFLLDGLAAVHTPRARMDFTSPLKPAVLSGVPEP 362 Query: 368 TSNDDVHPTHDGPFPA-LPTDYVYLLMPVRLPG 399 ++D+ PA P Y YL+MPVRLPG Sbjct: 363 ATDDEA-----ASRPAERPGSYRYLIMPVRLPG 390 >tr|C3PE73|C3PE73_CORA7 Tax_Id=548476 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium aurimucosum] Length = 444 Score = 366 bits (940), Expect = 2e-99 Identities = 189/390 (48%), Positives = 256/390 (65%), Gaps = 4/390 (1%) Query: 13 LKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYEVSAEVQVAAE 72 + F +A++ A+AV+WVA+ LP++ T PVL +L+T D+GL +GFDYEVS V++A Sbjct: 56 VSFRVAKDDLANAVAWVARSLPSKVTQPVLRAMLITADDNGLEFTGFDYEVSTRVRIAGM 115 Query: 73 IAXXXXXXXXXXXXXDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMAVEDYPTLPTL 132 + DI +LPNK + + N+V L CGS+RF LP + ++DYP LP L Sbjct: 116 VDEPGRIAVAGKLLSDIVASLPNKEIEMTQEDNKVLLICGSSRFELPLIPLDDYPQLPVL 175 Query: 133 PDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATDRFRLAVRELK 192 P+ TGT+ +F EAI QV AAG+D TLPMLTG+ I+I+G V + ATDRFRLA+R + Sbjct: 176 PEVTGTINPQLFVEAISQVVAAAGKDDTLPMLTGVHIDINGSHVEMTATDRFRLAMRTFE 235 Query: 193 WSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVG--VGKDGLFGISGGGKRST 250 W +SSD +A +LVPAKTL E ++ + + + G G + +GLFG+ + +T Sbjct: 236 WEPVSSDVQAKLLVPAKTLQETGRSLDTHLNIPVEIAVGTGENIAAEGLFGLHADNRETT 295 Query: 251 TRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFGDGILRLSA 310 TR+LDA+FP LLP H+A+A+I+VA L EAI+ V+L+ DR AQ+RMEF +G + L+A Sbjct: 296 TRMLDADFPNVAPLLPKTHSAMASIEVAPLQEAIRRVSLLTDRNAQIRMEFSEGEVTLAA 355 Query: 311 GADDVGRAEEDLAVAFTG-EPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKPALLRPTS 369 GAD GRA E L AF G E IAFNP+YL DGLA VH+ RV FGFT PS+PA++ P Sbjct: 356 GADS-GRASETLPCAFNGREDFVIAFNPSYLKDGLAVVHTNRVVFGFTEPSRPAIMIPEP 414 Query: 370 NDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 + DG FP TD+ YLLMPVRLPG Sbjct: 415 EELPAANEDGSFPTPETDFTYLLMPVRLPG 444 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.318 0.136 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 2,894,357,888 Number of extensions: 123243820 Number of successful extensions: 366222 Number of sequences better than 10.0: 2060 Number of HSP's gapped: 361157 Number of HSP's successfully gapped: 2222 Length of query: 399 Length of database: 3,808,957,724 Length adjustment: 140 Effective length of query: 259 Effective length of database: 2,247,493,764 Effective search space: 582100884876 Effective search space used: 582100884876 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 81 (35.8 bits)