BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML0003 (385 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P46391|RECF_MYCLE Tax_Id=1769 (recF)RecName: Full=DNA replica... 695 0.0 sp|B8ZTP0|RECF_MYCLB Tax_Id=561304 (recF)RecName: Full=DNA repli... 695 0.0 sp|B2HI48|RECF_MYCMM Tax_Id=216594 (recF)RecName: Full=DNA repli... 542 e-152 sp|A0PKB4|RECF_MYCUA Tax_Id=362242 (recF)RecName: Full=DNA repli... 540 e-152 sp|A0Q8R8|RECF_MYCA1 Tax_Id=243243 (recF)RecName: Full=DNA repli... 535 e-150 sp|Q9L7L5|RECF_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replica... 535 e-150 tr|C6DQ78|C6DQ78_MYCTK Tax_Id=478434 RecName: Full=DNA replicati... 534 e-150 tr|A5WI57|A5WI57_MYCTF Tax_Id=336982 RecName: Full=DNA replicati... 534 e-150 tr|A4KN35|A4KN35_MYCTU Tax_Id=395095 RecName: Full=DNA replicati... 534 e-150 tr|A2VMU5|A2VMU5_MYCTU Tax_Id=348776 RecName: Full=DNA replicati... 534 e-150 sp|Q59586|RECF_MYCTU Tax_Id=1773 (recF)RecName: Full=DNA replica... 533 e-149 sp|A5TY71|RECF_MYCTA Tax_Id=419947 (recF)RecName: Full=DNA repli... 533 e-149 sp|C1AJ00|RECF_MYCBT Tax_Id=561275 (recF)RecName: Full=DNA repli... 533 e-149 sp|Q7U314|RECF_MYCBO Tax_Id=1765 (recF)RecName: Full=DNA replica... 533 e-149 tr|A1KEE4|A1KEE4_MYCBP Tax_Id=410289 (recF_1)RecName: Full=DNA r... 533 e-149 sp|A4T4U1|RECF_MYCGI Tax_Id=350054 (recF)RecName: Full=DNA repli... 498 e-139 sp|A1T105|RECF_MYCVP Tax_Id=350058 (recF)RecName: Full=DNA repli... 492 e-137 sp|A3PSE0|RECF_MYCSJ Tax_Id=164757 (recF)RecName: Full=DNA repli... 485 e-135 sp|Q1BG58|RECF_MYCSS Tax_Id=164756 (recF)RecName: Full=DNA repli... 483 e-134 sp|A1U8S3|RECF_MYCSK Tax_Id=189918 (recF)RecName: Full=DNA repli... 483 e-134 sp|P0C561|RECF_MYCSM Tax_Id=1772 (recF)RecName: Full=DNA replica... 477 e-133 sp|A0QND8|RECF_MYCS2 Tax_Id=246196 (recF)RecName: Full=DNA repli... 477 e-133 tr|B1ME43|B1ME43_MYCA9 Tax_Id=561007 (recF)RecName: Full=DNA rep... 457 e-126 tr|B1A022|B1A022_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 394 e-108 tr|B1A028|B1A028_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA repli... 393 e-107 tr|B1A021|B1A021_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 393 e-107 tr|B1A023|B1A023_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 392 e-107 tr|B1A019|B1A019_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 392 e-107 tr|B1A027|B1A027_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA repli... 391 e-107 sp|C0ZLE4|RECF_RHOE4 Tax_Id=234621 (recF)RecName: Full=DNA repli... 391 e-107 tr|B1A029|B1A029_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA repli... 391 e-107 tr|B1A026|B1A026_MYCAV Tax_Id=44282 (recF)RecName: Full=DNA repl... 391 e-107 tr|B1A025|B1A025_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA repl... 391 e-107 sp|C1B7T0|RECF_RHOOB Tax_Id=632772 (recF)RecName: Full=DNA repli... 390 e-106 tr|B1A020|B1A020_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 390 e-106 tr|B1A024|B1A024_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA repl... 389 e-106 tr|C3JLE2|C3JLE2_RHOER Tax_Id=596309 RecName: Full=DNA replicati... 389 e-106 sp|Q0SAG4|RECF_RHOSR Tax_Id=101510 (recF)RecName: Full=DNA repli... 387 e-105 tr|C6WCF7|C6WCF7_ACTMD Tax_Id=446462 RecName: Full=DNA replicati... 370 e-100 sp|Q5Z3Z6|RECF_NOCFA Tax_Id=37329 (recF)RecName: Full=DNA replic... 368 e-100 sp|Q8FUL4|RECF_COREF Tax_Id=152794 (recF)RecName: Full=DNA repli... 362 3e-98 tr|C8NRV3|C8NRV3_COREF Tax_Id=196164 (recF)SubName: Full=RecF pr... 362 3e-98 sp|A4F5N5|RECF_SACEN Tax_Id=405948 (recF)RecName: Full=DNA repli... 357 2e-96 sp|A4Q9S2|RECF_CORGB Tax_Id=340322 (recF)RecName: Full=DNA repli... 353 2e-95 tr|C7MRN6|C7MRN6_SACVD Tax_Id=471857 RecName: Full=DNA replicati... 353 2e-95 sp|Q6M8X7|RECF_CORGL Tax_Id=1718 (recF)RecName: Full=DNA replica... 353 2e-95 tr|D0LA35|D0LA35_9ACTO Tax_Id=526226 SubName: Full=DNA replicati... 348 8e-94 tr|C0XTI2|C0XTI2_9CORY Tax_Id=525263 (recF)RecName: Full=DNA rep... 345 4e-93 sp|A4X0U0|RECF_SALTO Tax_Id=369723 (recF)RecName: Full=DNA repli... 343 2e-92 sp|C3PE74|RECF_CORA7 Tax_Id=548476 (recF)RecName: Full=DNA repli... 341 8e-92 >sp|P46391|RECF_MYCLE Tax_Id=1769 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium leprae] Length = 385 Score = 695 bits (1794), Expect = 0.0 Identities = 357/385 (92%), Positives = 358/385 (92%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL Sbjct: 1 MYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAGTIRAIVSTIVVNEGRECAIDLEI SLVRGMREVVGVLRAVLFAPE Sbjct: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIAAGRANRARLNRSLVRGMREVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL Sbjct: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA Sbjct: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS Sbjct: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP Sbjct: 301 LAIALRLAAYELLRADGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 VGWDAKWVTVDLRDSDSGRVSVVYP Sbjct: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 >sp|B8ZTP0|RECF_MYCLB Tax_Id=561304 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium leprae] Length = 385 Score = 695 bits (1794), Expect = 0.0 Identities = 357/385 (92%), Positives = 358/385 (92%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL Sbjct: 1 MYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAGTIRAIVSTIVVNEGRECAIDLEI SLVRGMREVVGVLRAVLFAPE Sbjct: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIAAGRANRARLNRSLVRGMREVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL Sbjct: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA Sbjct: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS Sbjct: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP Sbjct: 301 LAIALRLAAYELLRADGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 VGWDAKWVTVDLRDSDSGRVSVVYP Sbjct: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 >sp|B2HI48|RECF_MYCMM Tax_Id=216594 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium marinum] Length = 385 Score = 542 bits (1396), Expect = e-152 Identities = 278/383 (72%), Positives = 308/383 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW H DLEL PGRTVF GPNG GKTN+IEALWYS TL SHRVGTD PL Sbjct: 1 MYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RA++STIVVN+GRECA+DLEI S VR REV+GVLRAVLFAPE Sbjct: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDPA+RRRYLDDLAT+R+P IA VRADYDKVLRQRTALLKS++ AR+R D+G L Sbjct: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTLDVWD+RLA+HGAELMAARIDLV LAPEVEKAYQLLAP SR+A+I+YRAS+D A Sbjct: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRASMDAFVAA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 + DR L+ LLA L+ RR+ ELERG+CLVGPHRD+LELRLGDQPAKGFASHGESWS Sbjct: 241 DDAAPDRVTLEEGLLAALAARRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG+EPVLLLDDVFAELDAAR ALA VAESAEQVLVT+A EDIP Sbjct: 301 MAVALRLAAFALLRADGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 GWDA+ V +DLRDS GRVSVV Sbjct: 361 SGWDARKVHIDLRDSADGRVSVV 383 >sp|A0PKB4|RECF_MYCUA Tax_Id=362242 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium ulcerans] Length = 385 Score = 540 bits (1392), Expect = e-152 Identities = 277/383 (72%), Positives = 307/383 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW H DLEL PGRTVF GPNG GKTN+IEALWYS TL SHRVGTD PL Sbjct: 1 MYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RA++STIVVN+GRECA+DLEI S VR REV+GVLRAVLFAPE Sbjct: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDPA+RRRYLDDLAT+R+P IA VRADYDKVLRQRTALLKS++ AR+R D+G L Sbjct: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTLDVWD+RLA+HGAELMAARIDLV LAPEVEKAYQLLAP SR+A+I+YRAS+D A Sbjct: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRASMDAFVAA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 + DR L+ LLA L+ RR+ ELERG+CLVGPHRD+LELRLGDQPAKGFASHGESWS Sbjct: 241 DDAAPDRVALEEGLLAALAARRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG+EPVLLLDDVFAELDAAR ALA VAESAEQVLVT+A EDIP Sbjct: 301 MAVALRLAAFALLRADGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 GWDA+ V +DLRDS GRVS V Sbjct: 361 SGWDARKVHIDLRDSADGRVSAV 383 >sp|A0Q8R8|RECF_MYCA1 Tax_Id=243243 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium avium] Length = 385 Score = 535 bits (1379), Expect = e-150 Identities = 276/385 (71%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW H DLEL PGRTVF G NG GKTNL+EALWYS+TL SHRVGTD PL Sbjct: 1 MYVRHLGLRDFRSWAHADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG R +VSTIVVN+GRECA+DLEI S VR REV+GVLRAVLFAPE Sbjct: 61 IRAGADRTVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR+R D+G L Sbjct: 121 DLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGARHRGDRGAL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+SL A Sbjct: 181 DTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRSSLGAAAAA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 V + DR L+A LLAGL+ RR ELERG+CLVGPHRD+LEL LG+Q AKGFASHGESWS Sbjct: 241 EVNAGDRDYLEAALLAGLAARRYAELERGVCLVGPHRDDLELWLGEQVAKGFASHGESWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 D ++PVLLLDDVFAELDAAR RALA VAESAEQVLVT+A EDIP Sbjct: 301 LALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALAAVAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GW A+ + V+LRD+D+GRVS + P Sbjct: 361 AGWQARRLFVELRDTDAGRVSELRP 385 >sp|Q9L7L5|RECF_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium paratuberculosis] Length = 385 Score = 535 bits (1378), Expect = e-150 Identities = 276/385 (71%), Positives = 309/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW H DLEL PGRTVF G NG GKTNL+EALWYS+TL SHRVGTD PL Sbjct: 1 MYVRHLGLRDFRSWAHADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVLRAVLFAPE Sbjct: 61 IRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR+R D+G L Sbjct: 121 DLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGARHRGDRGAL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+SL A Sbjct: 181 DTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRSSLGAAASA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 V + DR L+A LLAGL+ R+ ELERG+CLVGPHRD+LEL LG+Q AKGFASHGESWS Sbjct: 241 EVNAGDRDYLEAALLAGLAAHRDAELERGMCLVGPHRDDLELWLGEQVAKGFASHGESWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 D ++PVLLLDDVFAELDAAR RALA VAESAEQVLVT+A EDIP Sbjct: 301 LALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALAAVAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GW A+ + V+LRD+D+GRVS + P Sbjct: 361 TGWQARRLFVELRDTDAGRVSELRP 385 >tr|C6DQ78|C6DQ78_MYCTK Tax_Id=478434 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 534 bits (1376), Expect = e-150 Identities = 273/385 (70%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++VLRQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 +DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >tr|A5WI57|A5WI57_MYCTF Tax_Id=336982 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 534 bits (1376), Expect = e-150 Identities = 273/385 (70%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++VLRQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 +DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >tr|A4KN35|A4KN35_MYCTU Tax_Id=395095 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis str. Haarlem] Length = 385 Score = 534 bits (1376), Expect = e-150 Identities = 273/385 (70%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++VLRQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 +DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >tr|A2VMU5|A2VMU5_MYCTU Tax_Id=348776 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis C] Length = 385 Score = 534 bits (1376), Expect = e-150 Identities = 273/385 (70%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++VLRQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 +DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >sp|Q59586|RECF_MYCTU Tax_Id=1773 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 533 bits (1373), Expect = e-149 Identities = 273/385 (70%), Positives = 307/385 (79%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++VLRQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >sp|A5TY71|RECF_MYCTA Tax_Id=419947 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 533 bits (1373), Expect = e-149 Identities = 273/385 (70%), Positives = 307/385 (79%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++VLRQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >sp|C1AJ00|RECF_MYCBT Tax_Id=561275 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium bovis] Length = 385 Score = 533 bits (1373), Expect = e-149 Identities = 272/385 (70%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++V+RQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 +DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >sp|Q7U314|RECF_MYCBO Tax_Id=1765 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium bovis] Length = 385 Score = 533 bits (1373), Expect = e-149 Identities = 272/385 (70%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++V+RQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 +DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >tr|A1KEE4|A1KEE4_MYCBP Tax_Id=410289 (recF_1)RecName: Full=DNA replication and repair protein recF;[Mycobacterium bovis] Length = 385 Score = 533 bits (1373), Expect = e-149 Identities = 272/385 (70%), Positives = 308/385 (80%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH GLRDFRSW VDLEL+PGRTVF GPNG GKTNLIEALWYSTTL SHRV D+PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT RA++STIVVN+GRECA+DLEI S VR R+VVGVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL LV GDPA+RRRYLDDLA VR+P IAAVRA+Y++V+RQRTALLKS+ ARYR D+GV Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD+RLAEHGAEL+AARIDLVNQLAPEV+KAYQLLAP SR+ASI YRAS+D+ G + Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 +DR LL A LLA L+ RR+ ELERG+CLVGPHRD+L LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD R RALAT AESAEQVLVT+A EDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 VGWDAKWVTVDLRDSDSGRVSVVYP 385 GWDA+ V +D+R D+G +SVV P Sbjct: 361 AGWDARRVHIDVRADDTGSMSVVLP 385 >sp|A4T4U1|RECF_MYCGI Tax_Id=350054 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium gilvum] Length = 389 Score = 498 bits (1283), Expect = e-139 Identities = 253/384 (65%), Positives = 301/384 (78%), Gaps = 1/384 (0%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH L DFRSW V+LEL+PGRTVF GPNG GKTNL+EALWYS TL SHRV +D PL Sbjct: 1 MYVRHLALTDFRSWSRVELELSPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RA+VSTI+VNEGRE A+DL+I S VR RE++GVLRAVLFAPE Sbjct: 61 IRAGAERAVVSTIIVNEGRELAVDLDITSGRANKARLNRSPVRSAREILGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP +RRRYLD+LAT R+P IAAVRADYDKV+RQRTALLK+ ++AR+R D+G L Sbjct: 121 DLALVRGDPGDRRRYLDELATTRRPRIAAVRADYDKVVRQRTALLKTASSARFRGDRGAL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD-IGGI 239 +TLDVWD LA HGA+L+AAR+DLV++LAPEVEKAYQLLAP SR A++ YR+ ++ + Sbjct: 181 ETLDVWDGHLAAHGAQLIAARVDLVHELAPEVEKAYQLLAPASRPATVRYRSGVEVVEAE 240 Query: 240 AGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESW 299 A G+SD + +A LL LS RR+ ELERG+CLVGPHRD+LELRLGDQPAKGFASHGESW Sbjct: 241 AAAGNSDPEVFEAALLDALSRRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESW 300 Query: 300 SXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDI 359 S DG++PVLLLDDVFAELD+AR +ALA VA SAEQVLVT+A EDI Sbjct: 301 SMALSLRLAAYELLRADGSDPVLLLDDVFAELDSARRQALAQVAASAEQVLVTAAVGEDI 360 Query: 360 PVGWDAKWVTVDLRDSDSGRVSVV 383 PV WDA+ + + + DSD GRVSV+ Sbjct: 361 PVDWDARRIEIAMTDSDLGRVSVL 384 >sp|A1T105|RECF_MYCVP Tax_Id=350058 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium vanbaalenii] Length = 386 Score = 492 bits (1267), Expect = e-137 Identities = 251/384 (65%), Positives = 297/384 (77%), Gaps = 1/384 (0%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH L DFRSW V+LEL PGRTVF G NG GKTNLIEALWYS TL SHRV +D PL Sbjct: 1 MYVRHLALTDFRSWARVELELEPGRTVFVGSNGFGKTNLIEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RA+VSTIVVN+GRE A+DL+I S VR RE++GVLRAVLFAPE Sbjct: 61 IRAGAERAVVSTIVVNDGRELAVDLDITSGRANKARLNRSPVRSAREILGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP RRRYLD+LAT R+P IAAVRADYDKV+RQRTALLK+ + ARYR D+G L Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPRIAAVRADYDKVVRQRTALLKTASGARYRGDRGAL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD-IGGI 239 +TLDVW+ LA HGA+L++AR+ LVN+LAPEVEKAYQLLAPGSR A+I YR+ +D + Sbjct: 181 ETLDVWNGHLASHGAQLISARVQLVNELAPEVEKAYQLLAPGSRPAAIRYRSGVDVVEAE 240 Query: 240 AGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESW 299 A G+SD + +A LL LS RR+ ELERG+CLVGPHRD+LELRLGDQ AKGFASHGESW Sbjct: 241 AAAGNSDEEMFEAALLDALSRRRDAELERGVCLVGPHRDDLELRLGDQVAKGFASHGESW 300 Query: 300 SXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDI 359 S +G++PVLLLDDVFAELD+AR +ALA VA +AEQVLVT+A +EDI Sbjct: 301 SMALALRLAAYELLRVEGSDPVLLLDDVFAELDSARRQALAQVAATAEQVLVTAAVEEDI 360 Query: 360 PVGWDAKWVTVDLRDSDSGRVSVV 383 P WDA+ + + ++DSD GR+SVV Sbjct: 361 PAEWDARRIGITMQDSDGGRISVV 384 >sp|A3PSE0|RECF_MYCSJ Tax_Id=164757 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium sp.] Length = 380 Score = 485 bits (1248), Expect = e-135 Identities = 254/383 (66%), Positives = 286/383 (74%), Gaps = 5/383 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VRH L DFRSW DLEL PGRTVF GPNG GKTNL+EALWYS TL SHRV +D PL Sbjct: 1 MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RA+VSTIVVNEGRE A+DLEI S VR REV+GVLRAVLFAPE Sbjct: 61 IRAGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP RRRYLD+LAT R+P IA VRADYD+V+RQRTALLKS A ARYR D+ VL Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 +TLDVWD LA HGA LMAAR DLV+ LAPEVEKAYQLLAPGSR A+I YR S+D Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 + ALL A ++ RR+ ELERG+CLVGPHRD+LELRLGDQ AKG+ASHGESWS Sbjct: 241 SAEYYEAALLDA-----MTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWS 295 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG++PVLLLDDVFAELDAAR RALA VA SAEQVLVT+A EDIP Sbjct: 296 MALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIP 355 Query: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 WDA+ + + ++D D GRVS+V Sbjct: 356 ADWDARRIVIRMQDDDDGRVSMV 378 >sp|Q1BG58|RECF_MYCSS Tax_Id=164756 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium sp.] Length = 380 Score = 483 bits (1243), Expect = e-134 Identities = 253/383 (66%), Positives = 285/383 (74%), Gaps = 5/383 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VRH L DFRSW DLEL PGRTVF GPNG GKTNL+EALWYS TL SHRV +D PL Sbjct: 1 MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR G RA+VSTIVVNEGRE A+DLEI S VR REV+GVLRAVLFAPE Sbjct: 61 IRVGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP RRRYLD+LAT R+P IA VRADYD+V+RQRTALLKS A ARYR D+ VL Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 +TLDVWD LA HGA LMAAR DLV+ LAPEVEKAYQLLAPGSR A+I YR S+D Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 + ALL A ++ RR+ ELERG+CLVGPHRD+LELRLGDQ AKG+ASHGESWS Sbjct: 241 SAEYYEAALLDA-----MTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWS 295 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG++PVLLLDDVFAELDAAR RALA VA SAEQVLVT+A EDIP Sbjct: 296 MALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIP 355 Query: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 WDA+ + + ++D D GRVS+V Sbjct: 356 ADWDARRIMIRMQDDDDGRVSMV 378 >sp|A1U8S3|RECF_MYCSK Tax_Id=189918 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium sp.] Length = 380 Score = 483 bits (1243), Expect = e-134 Identities = 253/383 (66%), Positives = 285/383 (74%), Gaps = 5/383 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VRH L DFRSW DLEL PGRTVF GPNG GKTNL+EALWYS TL SHRV +D PL Sbjct: 1 MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR G RA+VSTIVVNEGRE A+DLEI S VR REV+GVLRAVLFAPE Sbjct: 61 IRVGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP RRRYLD+LAT R+P IA VRADYD+V+RQRTALLKS A ARYR D+ VL Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 +TLDVWD LA HGA LMAAR DLV+ LAPEVEKAYQLLAPGSR A+I YR S+D Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 + ALL A ++ RR+ ELERG+CLVGPHRD+LELRLGDQ AKG+ASHGESWS Sbjct: 241 SAEYYEAALLDA-----MTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWS 295 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG++PVLLLDDVFAELDAAR RALA VA SAEQVLVT+A EDIP Sbjct: 296 MALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIP 355 Query: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 WDA+ + + ++D D GRVS+V Sbjct: 356 ADWDARRIMIRMQDDDDGRVSMV 378 >sp|P0C561|RECF_MYCSM Tax_Id=1772 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium smegmatis] Length = 384 Score = 477 bits (1228), Expect = e-133 Identities = 249/383 (65%), Positives = 287/383 (74%), Gaps = 1/383 (0%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++ RH GL DFRSW VDL+L PGRTVF GPNG GKTNL+EALWYS TL SHRV TD PL Sbjct: 1 MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RAIVSTIVVNEGRE A+DLEI S VR RE++GVLRAVLF+PE Sbjct: 61 IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL+LV GDP +RRRYLD+LAT R+P +A VRADYDKV+RQRTALLK+ A ARYR D+ V+ Sbjct: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD LA HGA L+A+R+ LV +L PEVEKAYQLLAP SR A+I YR+S++ A Sbjct: 181 DTLEVWDGHLAAHGAALVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 G +A LL L+ RR+ ELERG+CLVGPHRD+LELRLGDQPAKGFASHGESWS Sbjct: 241 -PGPESVEFYEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD +R RALATVA SAEQVLVT+A EDIP Sbjct: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359 Query: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 WDA+ V + + + D GRVS+V Sbjct: 360 EDWDARRVEIRMVEDDGGRVSMV 382 >sp|A0QND8|RECF_MYCS2 Tax_Id=246196 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium smegmatis] Length = 384 Score = 477 bits (1228), Expect = e-133 Identities = 249/383 (65%), Positives = 287/383 (74%), Gaps = 1/383 (0%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++ RH GL DFRSW VDL+L PGRTVF GPNG GKTNL+EALWYS TL SHRV TD PL Sbjct: 1 MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IRAG RAIVSTIVVNEGRE A+DLEI S VR RE++GVLRAVLF+PE Sbjct: 61 IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL+LV GDP +RRRYLD+LAT R+P +A VRADYDKV+RQRTALLK+ A ARYR D+ V+ Sbjct: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 DTL+VWD LA HGA L+A+R+ LV +L PEVEKAYQLLAP SR A+I YR+S++ A Sbjct: 181 DTLEVWDGHLAAHGAALVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 G +A LL L+ RR+ ELERG+CLVGPHRD+LELRLGDQPAKGFASHGESWS Sbjct: 241 -PGPESVEFYEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 DG EPVLLLDDVFAELD +R RALATVA SAEQVLVT+A EDIP Sbjct: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359 Query: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 WDA+ V + + + D GRVS+V Sbjct: 360 EDWDARRVEIRMVEDDGGRVSMV 382 >tr|B1ME43|B1ME43_MYCA9 Tax_Id=561007 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium abscessus] Length = 401 Score = 457 bits (1175), Expect = e-126 Identities = 243/385 (63%), Positives = 286/385 (74%), Gaps = 5/385 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 VYVR GLRDFRSW+ V+LEL PGRTVF GPNG GKTNL+EALWYS+TL SHRV TD PL Sbjct: 20 VYVRQLGLRDFRSWERVNLELEPGRTVFVGPNGYGKTNLVEALWYSSTLGSHRVATDAPL 79 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR G RA+VSTIVVN+GRE AIDLEI S VR REV+G+L AVLFAPE Sbjct: 80 IRTGAERAVVSTIVVNDGRELAIDLEIAAGRANKARVNRSPVRSPREVLGILHAVLFAPE 139 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLK-SLAAARYRSDQGV 179 DL+LV GDPA+RRR+LDDL R+P +A VRADYDKVLRQRTALLK ++AA R R DQ V Sbjct: 140 DLSLVRGDPADRRRFLDDLLIQRRPRMAGVRADYDKVLRQRTALLKTAMAALRQRHDQSV 199 Query: 180 LDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGI 239 LDTLDVWD L HGAEL++ARI+LV +L P VEK+YQLLAP SR A I+YR+S++ G Sbjct: 200 LDTLDVWDGHLVAHGAELLSARIELVGELHPLVEKSYQLLAPASRPADIAYRSSVE-GVE 258 Query: 240 AGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESW 299 AG+ L L AGL +R+ E+ERG+CLVGPHRD+LELRLGD PAKGFASHGESW Sbjct: 259 AGLSVEH---LADALQAGLVAKRSAEIERGVCLVGPHRDDLELRLGDGPAKGFASHGESW 315 Query: 300 SXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDI 359 S DG +PVL+LDDVFAELD AR R+LATVA AEQVLVT+A +D+ Sbjct: 316 SFALALRLAAFDLLRADGTDPVLMLDDVFAELDGARRRSLATVAADAEQVLVTAAVPDDV 375 Query: 360 PVGWDAKWVTVDLRDSDSGRVSVVY 384 P A+ VTV++++ +GR SV + Sbjct: 376 PEELSARTVTVEVQEGPAGRKSVAH 400 >tr|B1A022|B1A022_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 394 bits (1013), Expect = e-108 Identities = 207/288 (71%), Positives = 230/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL + A V DR L+A LLAGL+ RR+ ELERG+CLVGPHRD+LEL LG+Q AKGF Sbjct: 181 SLGVAASAEVNDGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A028|B1A028_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium paratuberculosis] Length = 289 Score = 393 bits (1010), Expect = e-107 Identities = 207/288 (71%), Positives = 230/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR+ ELERG+CLVGPHRD+LEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A021|B1A021_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 393 bits (1010), Expect = e-107 Identities = 207/288 (71%), Positives = 230/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR+ ELERG+CLVGPHRD+LEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A023|B1A023_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 392 bits (1006), Expect = e-107 Identities = 206/288 (71%), Positives = 230/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G L+TLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALETLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR+ ELERG+CLVGPHRD+LEL LG+Q AKGF Sbjct: 181 SLGAAAAAEVNAGDRDYLEAALLAGLADRRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A019|B1A019_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 392 bits (1006), Expect = e-107 Identities = 206/288 (71%), Positives = 228/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG R +VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRTVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR ELERG+CLVGPHRD+LEL LG+Q AKGF Sbjct: 181 SLGAAAAAEVNAGDRDYLEAALLAGLAARRYAELERGVCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A027|B1A027_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium paratuberculosis] Length = 289 Score = 391 bits (1005), Expect = e-107 Identities = 206/288 (71%), Positives = 229/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ R+ ELERG+CLVGPHRD+LEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAAHRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALA 288 >sp|C0ZLE4|RECF_RHOE4 Tax_Id=234621 (recF)RecName: Full=DNA replication and repair protein recF;[Rhodococcus erythropolis] Length = 409 Score = 391 bits (1004), Expect = e-107 Identities = 210/399 (52%), Positives = 270/399 (67%), Gaps = 16/399 (4%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VR F LRDFRSWD + L+L PG TVF G NG+GKTN++E+L Y +TLSSHRV TD P+ Sbjct: 1 MFVRRFSLRDFRSWDSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSTDAPM 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR+G+ A VVN GRE ID+E+ S R REV+G+L++V+FAPE Sbjct: 61 IRSGSASAFAGATVVNNGRELTIDVELIEGKSNRARINQSPTRRPREVLGILQSVMFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQG-- 178 DL+LV GDP +RRRYLD+L T R P +AAVRADYDKVLRQR+ALLK+ AA R +G Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDKVLRQRSALLKTAGAALRRGSRGGE 180 Query: 179 ---VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASL- 234 VL TL+VWD LA HGA+L+A R++LV+ LAP + ++Y+ +AP SR ASI Y++SL Sbjct: 181 SDNVLSTLEVWDGHLAAHGAQLLAGRLELVHDLAPHLAESYRSIAPESRPASIRYKSSLG 240 Query: 235 --------DIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGD 286 D I+G+ D A L+ L+ R+ E++RG+CLVGPHRD+LEL LGD Sbjct: 241 SSLDPEFTDPARISGI--DDVAYLEERFHLELAQMRSKEIDRGVCLVGPHRDDLELVLGD 298 Query: 287 QPAKGFASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESA 346 PAKGFASHGESWS DG++PVL+LDDVFAELD R RALATVA +A Sbjct: 299 SPAKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRRRRRALATVAATA 358 Query: 347 EQVLVTSAAQEDIPVGWDAKWVTVDLRDSDSGRVSVVYP 385 EQVL+T+A ED+P +A V+ D+ GR+S + P Sbjct: 359 EQVLITAAVPEDVPDELEAAKFGVEASDTGDGRISRIVP 397 >tr|B1A029|B1A029_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium paratuberculosis] Length = 289 Score = 391 bits (1004), Expect = e-107 Identities = 206/288 (71%), Positives = 229/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRLPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR+ ELERG+CLVGPHRD+LEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A026|B1A026_MYCAV Tax_Id=44282 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. silvaticum] Length = 289 Score = 391 bits (1004), Expect = e-107 Identities = 205/288 (71%), Positives = 230/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR+ E+ERG+CLVGPHRD+LEL LG++ AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAEMERGMCLVGPHRDDLELWLGERVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A025|B1A025_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. avium] Length = 289 Score = 391 bits (1004), Expect = e-107 Identities = 205/288 (71%), Positives = 230/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR+ E+ERG+CLVGPHRD+LEL LG++ AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAEMERGMCLVGPHRDDLELWLGERVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >sp|C1B7T0|RECF_RHOOB Tax_Id=632772 (recF)RecName: Full=DNA replication and repair protein recF;[Rhodococcus opacus] Length = 410 Score = 390 bits (1002), Expect = e-106 Identities = 213/398 (53%), Positives = 261/398 (65%), Gaps = 17/398 (4%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VR LRDFRSWD + L L PG TVF GPNG+GKTN++EAL Y +TLSSHRV +D PL Sbjct: 1 MFVRALSLRDFRSWDALGLNLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT +A VVN GRE +DLE+ S R RE++G+L+ VLFAPE Sbjct: 61 IRTGTAQAFAGATVVNTGRELTVDLELNEGKSNRARINQSPTRRPREILGILQTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQG-- 178 DL+LV GDP +RRRYLD+L T R P +AAVRADY++VLRQR+ALLK+ A RS +G Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYERVLRQRSALLKTAGGALRRSSRGGG 180 Query: 179 --------VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISY 230 L TL+VWD LA HGA+L+A R+ LV+ LAP + ++YQ LAP SR ASI Y Sbjct: 181 RPSEDGASALATLEVWDGHLAAHGAQLLAGRLHLVHDLAPHLAESYQSLAPESRPASIRY 240 Query: 231 RASLD-------IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELR 283 R+SL + D A L+ L LS R+ E+ERG+CLVGPHRD+LEL Sbjct: 241 RSSLGSSLPPEFTAPARAPEAGDIAFLEERFLQELSVMRSKEIERGVCLVGPHRDDLELH 300 Query: 284 LGDQPAKGFASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVA 343 LGD PAKGFASHGESWS DG++PVL+LDDVFAELD R RALA VA Sbjct: 301 LGDTPAKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRKRRRALAKVA 360 Query: 344 ESAEQVLVTSAAQEDIPVGWDAKWVTVDLRDSDSGRVS 381 AEQVL+T+A ED+P DA V+ RD+D GR+S Sbjct: 361 LDAEQVLITAAVPEDVPEELDAVRFGVEARDTDRGRIS 398 >tr|B1A020|B1A020_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 390 bits (1001), Expect = e-106 Identities = 204/288 (70%), Positives = 230/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LL+GL+ RR+ E+ERG+CLVGPHRD+LEL LG++ AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLSGLAARRDAEMERGMCLVGPHRDDLELWLGERVAKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A024|B1A024_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. avium] Length = 289 Score = 389 bits (999), Expect = e-106 Identities = 204/288 (70%), Positives = 229/288 (79%) Query: 53 RVGTDIPLIRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVL 112 RVGTD PLIRAG RA+VSTIVVN+GRECA+DLEI S VR REV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAAR 172 RAVLFAPEDLALV GDP+ RRRYLDDLAT+R+P IAAVRADYDKVLRQRTALLKSL+ AR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 YRSDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRA 232 +R D+G LDTLDVWD+RLAE+GA+LMAARIDLVNQLAPEVEKAYQLLAPGSR ASI YR+ Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 SLDIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGF 292 SL A V + DR L+A LLAGL+ RR+ E+ERG+CLVGPHRD+LEL LG++ KGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAEMERGMCLVGPHRDDLELWLGERVPKGF 240 Query: 293 ASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALA 340 ASHGESWS D ++PVLLLDDVFAELDAAR RALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|C3JLE2|C3JLE2_RHOER Tax_Id=596309 RecName: Full=DNA replication and repair protein recF;[Rhodococcus erythropolis SK121] Length = 409 Score = 389 bits (998), Expect = e-106 Identities = 209/399 (52%), Positives = 269/399 (67%), Gaps = 16/399 (4%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VR F LRDFRSWD + L+L PG TVF G NG+GKTN++E+L Y +TLSSHRV D P+ Sbjct: 1 MFVRRFSLRDFRSWDSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSADAPM 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR+G+ A VVN GRE ID+E+ S R REV+G+L++V+FAPE Sbjct: 61 IRSGSASAFAGATVVNNGRELTIDVELIEGKSNRARINQSPTRRPREVLGILQSVMFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQG-- 178 DL+LV GDP +RRRYLD+L T R P +AAVRADYDKVLRQR+ALLK+ AA R +G Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDKVLRQRSALLKTAGAALRRGSRGGE 180 Query: 179 ---VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASL- 234 VL TL+VWD LA HGA+L+A R++LV+ LAP + ++Y+ +AP SR ASI Y++SL Sbjct: 181 SDNVLSTLEVWDGHLAAHGAQLLAGRLELVHDLAPHLAESYRSIAPESRPASIRYKSSLG 240 Query: 235 --------DIGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGD 286 D I+G+ D A L+ L+ R+ E++RG+CLVGPHRD+LEL LGD Sbjct: 241 SSLDPEFTDPARISGI--DDVAYLEERFHHELAQMRSKEIDRGVCLVGPHRDDLELILGD 298 Query: 287 QPAKGFASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESA 346 PAKGFASHGESWS DG++PVL+LDDVFAELD R RALATVA +A Sbjct: 299 SPAKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRRRRRALATVAATA 358 Query: 347 EQVLVTSAAQEDIPVGWDAKWVTVDLRDSDSGRVSVVYP 385 EQVL+T+A ED+P +A V+ D+ GR+S + P Sbjct: 359 EQVLITAAVPEDVPDELEAAKFGVEASDTGDGRISRIVP 397 >sp|Q0SAG4|RECF_RHOSR Tax_Id=101510 (recF)RecName: Full=DNA replication and repair protein recF;[Rhodococcus sp.] Length = 410 Score = 387 bits (994), Expect = e-105 Identities = 215/398 (54%), Positives = 263/398 (66%), Gaps = 17/398 (4%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VR LRDFRSWD + L L PG TVF GPNG+GKTN++EAL Y +TLSSHRV +D PL Sbjct: 1 MFVRALSLRDFRSWDALGLTLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR GT +A VVN GRE +DLE+ S R RE++G+L+ VLFAPE Sbjct: 61 IRTGTGQAFAGATVVNAGRELTVDLELNEGKSNRARINQSPTRRPREILGILQTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQG-- 178 DL+LV GDP +RRRYLD+L T R P +AAVRADYD+VLRQR+ALLK+ A R +G Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDRVLRQRSALLKTAGGALRRVSRGSG 180 Query: 179 --------VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISY 230 L TL+VWD LA HGA+L+A R+ LV+ LAP + ++YQ LAP SR ASI Y Sbjct: 181 RPSEDGASALATLEVWDGHLAAHGAQLLAGRLHLVHDLAPHLAESYQSLAPESRPASIRY 240 Query: 231 RASL------DIGGIAGV-GSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELR 283 R+SL + A V + D A L+ L LS R+ E+ERG+CLVGPHRD+LEL Sbjct: 241 RSSLGSSLPPEFTEPARVPEAGDIAFLEERFLQELSVMRSKEIERGVCLVGPHRDDLELH 300 Query: 284 LGDQPAKGFASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVA 343 LGD PAKGFASHGESWS DG++PVL+LDDVFAELD R RALA VA Sbjct: 301 LGDTPAKGFASHGESWSFALSLRLAGFALLRSDGSDPVLMLDDVFAELDRRRRRALAKVA 360 Query: 344 ESAEQVLVTSAAQEDIPVGWDAKWVTVDLRDSDSGRVS 381 AEQVL+T+A ED+P DA V+ RD+D GR+S Sbjct: 361 LDAEQVLITAAVPEDVPEELDAVRFGVEARDTDRGRIS 398 >tr|C6WCF7|C6WCF7_ACTMD Tax_Id=446462 RecName: Full=DNA replication and repair protein recF;[Actinosynnema mirum] Length = 371 Score = 370 bits (950), Expect = e-100 Identities = 200/365 (54%), Positives = 245/365 (67%), Gaps = 7/365 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH + DFRSW+H DL PG V G NG+GKTNL+EAL Y TL SHRV +D PL Sbjct: 1 MYVRHLQVTDFRSWEHADLAFEPGVNVLVGRNGHGKTNLVEALGYVATLGSHRVASDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR+G RA+V T VVNEGRE ++LEI V R+V+G+LR VLFAPE Sbjct: 61 IRSGAQRAVVRTAVVNEGRELLVELEITPGRANRARVNRGPVPRPRDVLGILRTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DL+LV GDP RRR+LD+L T+R P A VR+DY++VLRQR ALLK++ + R L Sbjct: 121 DLSLVRGDPGERRRFLDELLTLRAPRYAGVRSDYERVLRQRGALLKTVRSVR----SAEL 176 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 TLDVWD LA+HGAEL+AAR+DLV +AP AY +AP SR A +SYR+SL G A Sbjct: 177 GTLDVWDGHLAKHGAELLAARLDLVAAIAPHAAAAYAEVAPESRPALLSYRSSL---GEA 233 Query: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 G+ DR +L+ LLA L R E++RG+CLVGPHRD+LEL LG+ PAKG+ASHGESWS Sbjct: 234 FPGTHDREVLEDALLAELHRLRPQEIDRGVCLVGPHRDDLELSLGELPAKGYASHGESWS 293 Query: 301 XXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 +G EPVL+LDDVFAELD R R LA VA +AEQV +T+A ED+P Sbjct: 294 FALALRLGAYELLREEGAEPVLVLDDVFAELDRGRRRQLAKVAAAAEQVFITAAVAEDVP 353 Query: 361 VGWDA 365 DA Sbjct: 354 EELDA 358 >sp|Q5Z3Z6|RECF_NOCFA Tax_Id=37329 (recF)RecName: Full=DNA replication and repair protein recF;[Nocardia farcinica] Length = 388 Score = 368 bits (944), Expect = e-100 Identities = 204/374 (54%), Positives = 242/374 (64%), Gaps = 6/374 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VR LRDFRSW+HV+LEL+ GRTVF G NGNGKTNL+EA+ Y TL SHRV D PL Sbjct: 1 MFVRALSLRDFRSWEHVELELSTGRTVFLGANGNGKTNLLEAVGYLATLGSHRVSADAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR+G RA V VVN GRE ID+E+ S VR RE++G+L+ VLFAPE Sbjct: 61 IRSGAQRARVGANVVNAGRELRIDVELNQGSANRAQINRSPVRRTREILGILQTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 DLALV GDP RRR+LD+L T R P +A VRADYD+VLRQR+ALLK+ A R+ L Sbjct: 121 DLALVRGDPGERRRFLDELCTARLPRLAGVRADYDRVLRQRSALLKT--AGRHARSTADL 178 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 TLDVWD LA H A L+A R+ LV+ L P + +AY+ LAP SR A+I YR++ G Sbjct: 179 STLDVWDGHLAGHAAVLVAQRLRLVHDLFPYLAEAYRSLAPESRPAAIGYRSAYLPGEFL 238 Query: 241 GVG----SSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHG 296 D A L+ +L L+ R ELERG+CLVGPHRDELEL LGD PAKGFASHG Sbjct: 239 DPARAPRDDDAAALEEIILRELAAARRKELERGVCLVGPHRDELELMLGDTPAKGFASHG 298 Query: 297 ESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQ 356 ESWS EPVLLLDDVFAELD R ALA VA AEQVL+T+A Sbjct: 299 ESWSFALALRLASFDLLRSTSAEPVLLLDDVFAELDRRRRTALAAVAADAEQVLITAAVP 358 Query: 357 EDIPVGWDAKWVTV 370 ED+P A + V Sbjct: 359 EDVPAELSATPIRV 372 >sp|Q8FUL4|RECF_COREF Tax_Id=152794 (recF)RecName: Full=DNA replication and repair protein recF;[Corynebacterium efficiens] Length = 398 Score = 362 bits (930), Expect = 3e-98 Identities = 193/391 (49%), Positives = 259/391 (66%), Gaps = 9/391 (2%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +Y+R LRDFRSW + +EL PG T+F G NG GKTN++EA+ Y LSSHRV TD PL Sbjct: 1 MYIRSLELRDFRSWPELKVELKPGITIFIGRNGFGKTNIVEAIGYLAHLSSHRVSTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +RA A +S + VN+GRE A L I + V+ RE++GV++ VLFAPE Sbjct: 61 VRANAGDARISAVAVNQGRELAAHLLIKPHAANQGQINRTRVKSPRELLGVIKTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAA---RYRSDQ 177 DLALV G+PA RRRYLDD+ R+P +A V+ADYDKVL+QR ALLK+ A Y +++ Sbjct: 121 DLALVRGEPAERRRYLDDIIATRRPRMAGVKADYDKVLKQRNALLKTATIALRRGYGTEE 180 Query: 178 G--VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD 235 G L TLD WD +LA GAE+MAAR LV L+ ++ AYQ +AP SR A+++Y+ ++D Sbjct: 181 GAAALATLDTWDGQLARLGAEVMAARFALVQDLSSQIRDAYQTIAPESRPAAVNYKTTID 240 Query: 236 IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASH 295 G+A G D +++A LL L+ +R E+ERG+ LVGPHRD+LEL LG QPAKGFASH Sbjct: 241 -QGLAQFGEFDAGIIEATLLTELAAKRQREIERGMSLVGPHRDDLELHLGGQPAKGFASH 299 Query: 296 GESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAA 355 GE+WS DG +P+L+LDDVF+ELDA R L +A AEQV++T+A Sbjct: 300 GETWSFALSMRIAEFNLLRSDGTDPILILDDVFSELDAGRREKLVGIARDAEQVIITAAV 359 Query: 356 QEDIPVGW-DAKWV--TVDLRDSDSGRVSVV 383 +D+P DA TV +RD+D+GR+S++ Sbjct: 360 SDDLPANLADAITARHTVTVRDTDAGRISLL 390 >tr|C8NRV3|C8NRV3_COREF Tax_Id=196164 (recF)SubName: Full=RecF protein;[Corynebacterium efficiens YS-314] Length = 398 Score = 362 bits (930), Expect = 3e-98 Identities = 193/391 (49%), Positives = 259/391 (66%), Gaps = 9/391 (2%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +Y+R LRDFRSW + +EL PG T+F G NG GKTN++EA+ Y LSSHRV TD PL Sbjct: 1 MYIRSLELRDFRSWPELKVELKPGITIFIGRNGFGKTNIVEAIGYLAHLSSHRVSTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +RA A +S + VN+GRE A L I + V+ RE++GV++ VLFAPE Sbjct: 61 VRANAGDARISAVAVNQGRELAAHLLIKPHAANQGQINRTRVKSPRELLGVIKTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAA---RYRSDQ 177 DLALV G+PA RRRYLDD+ R+P +A V+ADYDKVL+QR ALLK+ A Y +++ Sbjct: 121 DLALVRGEPAERRRYLDDIIATRRPRMAGVKADYDKVLKQRNALLKTATIALRRGYGTEE 180 Query: 178 G--VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD 235 G L TLD WD +LA GAE+MAAR LV L+ ++ AYQ +AP SR A+++Y+ ++D Sbjct: 181 GAAALATLDTWDGQLARLGAEVMAARFALVQDLSSQIRDAYQTIAPESRPAAVNYKTTID 240 Query: 236 IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASH 295 G+A G D +++A LL L+ +R E+ERG+ LVGPHRD+LEL LG QPAKGFASH Sbjct: 241 -QGLAQFGEFDAGIIEATLLTELAAKRQREIERGMSLVGPHRDDLELHLGGQPAKGFASH 299 Query: 296 GESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAA 355 GE+WS DG +P+L+LDDVF+ELDA R L +A AEQV++T+A Sbjct: 300 GETWSFALSMRIAEFNLLRSDGTDPILILDDVFSELDAGRREKLVGIARDAEQVIITAAV 359 Query: 356 QEDIPVGW-DAKWV--TVDLRDSDSGRVSVV 383 +D+P DA TV +RD+D+GR+S++ Sbjct: 360 SDDLPANLADAITARHTVTVRDTDAGRISLL 390 >sp|A4F5N5|RECF_SACEN Tax_Id=405948 (recF)RecName: Full=DNA replication and repair protein recF;[Saccharopolyspora erythraea] Length = 391 Score = 357 bits (915), Expect = 2e-96 Identities = 200/392 (51%), Positives = 240/392 (61%), Gaps = 14/392 (3%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVRH + DFRSW H DL PG TV G NG GKTNL+EAL Y TL SHRV TD PL Sbjct: 1 MYVRHLQVTDFRSWPHADLTFEPGPTVLVGSNGQGKTNLVEALGYVATLGSHRVATDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +R GT RA+V VVN GRE ++LEI R+V+G+LR VLFAPE Sbjct: 61 VRYGTQRAVVRAAVVNHGRELLVELEITPGKANRARINRGAAGKPRDVLGILRTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 D+A+V GDP RRR+LDDL R P A VR+DYD+VLRQR+ALLKS AA+ G L Sbjct: 121 DMAMVRGDPGERRRFLDDLLVARAPRYAGVRSDYDRVLRQRSALLKSAGAAKRGGSGGDL 180 Query: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAY-------QLLAPGSRTASISYRAS 233 TL+VWD LA +GAEL+A R+DLV +AP V AY + AP R A + YR+S Sbjct: 181 RTLEVWDGHLARYGAELLAGRLDLVAAIAPHVTSAYANVAATAEETAPSGRVADVRYRSS 240 Query: 234 LDIGGIAGVG-----SSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQP 288 L G G +D +L+ LLA L R ELERG+ LVGPHRD+LEL LG+ P Sbjct: 241 LGESLPEGYGVPRGEPADVEVLEKALLAELERVRAQELERGVSLVGPHRDDLELMLGELP 300 Query: 289 AKGFASHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQ 348 AKG+ASHGESWS DG EPVL+LDDVFAELD R LA + AEQ Sbjct: 301 AKGYASHGESWSFALALRLASYHLLAEDGAEPVLILDDVFAELDRRRRSRLAELVAGAEQ 360 Query: 349 VLVTSAAQEDIPVGWDAKWVTVDLRDSDSGRV 380 VLVT+A ED+P + V D+R+ + RV Sbjct: 361 VLVTAAVAEDVPE--ELTGVRFDVREGEVRRV 390 >sp|A4Q9S2|RECF_CORGB Tax_Id=340322 (recF)RecName: Full=DNA replication and repair protein recF;[Corynebacterium glutamicum] Length = 394 Score = 353 bits (907), Expect = 2e-95 Identities = 186/391 (47%), Positives = 258/391 (65%), Gaps = 9/391 (2%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +++R LRD+RSW + ++L PG TVF G NG GKTN++EA+ Y LSSHRV +D PL Sbjct: 1 MHIRSLELRDYRSWPELKVDLEPGITVFIGRNGFGKTNIVEAIGYLAHLSSHRVSSDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +RA A VS + VN+GRE A L I + VR RE++GV++ VLFAPE Sbjct: 61 VRAHAENARVSAVAVNQGRELAAHLLIKPHAANQASLNRTKVRTPRELLGVVKTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAA---RYRSDQ 177 DLALV G+PA RRRYLDD+ RQP +A V+ADYDKVL+QR ALLK+ A Y +++ Sbjct: 121 DLALVKGEPAERRRYLDDIIATRQPRMAGVKADYDKVLKQRNALLKTATIALRRGYGTEE 180 Query: 178 G--VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD 235 G L TLD WD +LA GAE+MAAR L+N+L P++ +AY +AP SR A+++Y+ ++D Sbjct: 181 GAAALSTLDTWDGQLARLGAEVMAARFALLNELGPKIYEAYTTIAPESRPAAVNYKTTID 240 Query: 236 IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASH 295 G++ D +++A LL L+ +R E+ERG LVGPHRD+++L LGDQPAKGFASH Sbjct: 241 -QGLSQFSEFDAGIIEATLLTELAAKRQREIERGSSLVGPHRDDVDLMLGDQPAKGFASH 299 Query: 296 GESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAA 355 GE+WS D +P+L+LDDVF+ELDA R + L +A+ EQVL+T+A Sbjct: 300 GETWSFALSLRIAEFNLLKSDDTDPILILDDVFSELDAGRRQKLVGIAQEVEQVLITAAV 359 Query: 356 QEDIPVGWDAKWV---TVDLRDSDSGRVSVV 383 +D+P TV ++D+D+GR+S++ Sbjct: 360 HDDLPENLKKVLTAQHTVTVQDTDTGRISLL 390 >tr|C7MRN6|C7MRN6_SACVD Tax_Id=471857 RecName: Full=DNA replication and repair protein recF;[Saccharomonospora viridis] Length = 390 Score = 353 bits (907), Expect = 2e-95 Identities = 198/373 (53%), Positives = 239/373 (64%), Gaps = 12/373 (3%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +Y+RH + DFRSW+HVDL L G TV GPNG GKTNL+EA+ Y +TLSSHRV TD PL Sbjct: 1 MYLRHLQVTDFRSWEHVDLPLAQGPTVLVGPNGQGKTNLLEAIGYISTLSSHRVATDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +R G RA+V VVNEGRE ++LEI V R+V+G+LR VLF+PE Sbjct: 61 VRHGCDRALVRAAVVNEGRELTVELEIAPGRANRARINRGAVGKPRDVLGILRTVLFSPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLA------AARYR 174 DLALV GDP+ RRR+LDDL R P A VR++YD+VLRQR ALLKS+ AR Sbjct: 121 DLALVRGDPSERRRFLDDLLVQRAPRYAGVRSEYDRVLRQRNALLKSVGRAGGRRGAREE 180 Query: 175 SDQGVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASL 234 +D L TL VWD LA GAEL+AAR++LV +L P V +Y +AP SR A I+YR+SL Sbjct: 181 TDPYALSTLQVWDNHLASAGAELLAARLNLVAELGPYVASSYADVAPDSRPARIAYRSSL 240 Query: 235 DIGGIAGVGSSDRALLQAD-----LLAGLSTRRNVELERGICLVGPHRDELELRLGDQPA 289 G G+ D + LL L R ELERG+ L+GPHRD+LEL LG+ PA Sbjct: 241 GGALPEGWGTPDGPEASTEQLGEILLRVLGEVRETELERGVSLIGPHRDDLELMLGEAPA 300 Query: 290 KGFASHGESWSXXXXXXXXXXXXXXXD-GNEPVLLLDDVFAELDAARCRALATVAESAEQ 348 KG+ASHGESWS + G EPVLLLDDVFAELD+ R LA VA AEQ Sbjct: 301 KGYASHGESWSFALALRLASYRLLRNESGGEPVLLLDDVFAELDSRRRARLAEVATKAEQ 360 Query: 349 VLVTSAAQEDIPV 361 VLVT+A ED+PV Sbjct: 361 VLVTAAVDEDVPV 373 >sp|Q6M8X7|RECF_CORGL Tax_Id=1718 (recF)RecName: Full=DNA replication and repair protein recF;[Corynebacterium glutamicum] Length = 394 Score = 353 bits (906), Expect = 2e-95 Identities = 186/391 (47%), Positives = 257/391 (65%), Gaps = 9/391 (2%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +++R LRD+RSW + ++L PG TVF G NG GKTN++EA+ Y LSSHRV +D PL Sbjct: 1 MHIRSLELRDYRSWPELKVDLEPGITVFIGRNGFGKTNIVEAIGYLAHLSSHRVSSDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +RA A VS + VN+GRE A L I + VR RE++GV++ VLFAPE Sbjct: 61 VRAHAENARVSAVAVNQGRELAAHLLIKPHAANQASLNRTKVRTPRELLGVVKTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAA---RYRSDQ 177 DLALV G+PA RRRYLDD+ RQP +A V+ADYDKVL+QR ALLK+ A Y +++ Sbjct: 121 DLALVKGEPAERRRYLDDIIATRQPRMAGVKADYDKVLKQRNALLKTATIALRRGYGTEE 180 Query: 178 G--VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD 235 G L TLD WD +LA GAE+MAAR L+N+L P++ +AY +AP SR A+++Y+ ++D Sbjct: 181 GAAALSTLDTWDGQLARLGAEVMAARFALLNELGPKIYEAYTTIAPESRPAAVNYKTTID 240 Query: 236 IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASH 295 G++ D +++A LL L+ +R E+ERG LVGPHRD+++L LGDQPAKGFASH Sbjct: 241 -QGLSQFSEFDAGIIEATLLTELAAKRQREIERGSSLVGPHRDDVDLMLGDQPAKGFASH 299 Query: 296 GESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAA 355 GE+WS DG +P+L+LDDVF+ELDA R L +A+ EQVL+T+A Sbjct: 300 GETWSFALSLRIAEFNLLKSDGTDPILILDDVFSELDAGRREKLVGIAQEVEQVLITAAV 359 Query: 356 QEDIPVGWDAKWV---TVDLRDSDSGRVSVV 383 +D+P TV ++D+ +GR+S++ Sbjct: 360 HDDLPENLKKVLTAQHTVTVQDTGTGRISLL 390 >tr|D0LA35|D0LA35_9ACTO Tax_Id=526226 SubName: Full=DNA replication and repair protein RecF;[Gordonia bronchialis DSM 43247] Length = 397 Score = 348 bits (892), Expect = 8e-94 Identities = 194/390 (49%), Positives = 243/390 (62%), Gaps = 6/390 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 ++VR LRDFRSW DLEL TVF G NG GKTN++EAL Y TL SHRV TD PL Sbjct: 1 MFVRELHLRDFRSWRTADLELAAEPTVFTGRNGFGKTNILEALQYLATLRSHRVSTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 + +G A+V+ V N GRE L I R REV+G+LR VLFAPE Sbjct: 61 VHSGATSALVTATVENSGRELTAQLRINAEGANKASINNGPPRRAREVIGILRTVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSD---Q 177 DL+LV GDP +RRR++D+L R P+ A R+DYD+VLRQR ALLK+ AA R Sbjct: 121 DLSLVRGDPTDRRRFIDELVAQRGPLHVAARSDYDRVLRQRAALLKTAGAAMRRGGGDAA 180 Query: 178 GVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISY--RASLD 235 V+ TLDVWD +LAEHGA + AAR+D++N+L P V +AY +AP SR ++Y A D Sbjct: 181 SVISTLDVWDAQLAEHGAAVTAARVDVLNELRPHVTEAYASIAPHSRPTDLAYLPAAGPD 240 Query: 236 IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASH 295 + AG +D A + LLA L+ R E+ERG+CLVGPHRD++ + LGD AKGFASH Sbjct: 241 VLPPAG-ARADVAAIGETLLAQLAQVRTKEIERGVCLVGPHRDDVGIILGDDIAKGFASH 299 Query: 296 GESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAA 355 GESWS +G EPV++LDDVFAELDA R R LAT AEQ+LVT+A Sbjct: 300 GESWSLALALRLGSVALTRAEGVEPVIMLDDVFAELDATRRRKLATFTSDAEQLLVTAAV 359 Query: 356 QEDIPVGWDAKWVTVDLRDSDSGRVSVVYP 385 EDIP + + V++ D GR SV+ P Sbjct: 360 AEDIPDEIGGRRIGVEVLDDADGRRSVLTP 389 >tr|C0XTI2|C0XTI2_9CORY Tax_Id=525263 (recF)RecName: Full=DNA replication and repair protein recF;[Corynebacterium lipophiloflavum DSM 44291] Length = 394 Score = 345 bits (886), Expect = 4e-93 Identities = 186/367 (50%), Positives = 241/367 (65%), Gaps = 7/367 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVR LRDFRSW + L L G TVF G NG+GKTN++EAL Y++TL SHRV TD PL Sbjct: 1 MYVRDLDLRDFRSWPELTLTLEQGATVFAGRNGHGKTNIVEALHYTSTLGSHRVSTDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 IR+G A VS VN+GRE L I + ++ REV+GVLR V+F+PE Sbjct: 61 IRSGCSDARVSVTTVNDGRELTTHLLIKANGANQAQINRTRLKSAREVLGVLRTVMFSPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLA---AARYRSDQ 177 DL LV G+PA RRR+LDDLAT R P + +ADYDKVLRQR ALL+S A Y D Sbjct: 121 DLKLVAGEPAERRRFLDDLATSRAPRLGGAKADYDKVLRQRNALLRSSAHELRRGYGDDT 180 Query: 178 G--VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD 235 G L TLDVWD +LA GAE+ A R++L++ L+P + ++Y +AP SR AS+SY +++D Sbjct: 181 GASALATLDVWDLQLARLGAEVTAGRLELLDVLSPHIAESYAAVAPESRPASVSYSSTVD 240 Query: 236 --IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFA 293 + +AG S D +++A +L L+ RR E+ER LVGPHRD++ L LGD PAKG+A Sbjct: 241 DAVRSLAGEPSRDPGVIEAAMLTELARRRREEIERTTTLVGPHRDDMVLMLGDTPAKGYA 300 Query: 294 SHGESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTS 353 SHGE+WS +G+ PVL+LDDVFAELDA R + L VA SAEQVL+T+ Sbjct: 301 SHGETWSYALALHLAEYELLASEGSHPVLILDDVFAELDALRRQRLVAVAHSAEQVLITA 360 Query: 354 AAQEDIP 360 A +D+P Sbjct: 361 AVGDDLP 367 >sp|A4X0U0|RECF_SALTO Tax_Id=369723 (recF)RecName: Full=DNA replication and repair protein recF;[Salinispora tropica] Length = 377 Score = 343 bits (880), Expect = 2e-92 Identities = 190/362 (52%), Positives = 228/362 (62%), Gaps = 6/362 (1%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +YVR L DFRS++ V ++L PG V GPNG GKTNLIEAL Y TL SHRV TD PL Sbjct: 1 MYVRRLELVDFRSYERVGVDLEPGANVLVGPNGVGKTNLIEALGYVATLDSHRVATDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +R G I+ VV+EGRE ++LEI S R R+V+G LR VLFAPE Sbjct: 61 VRMGAAAGIIRCAVVHEGRELLVELEIVPGRANRARLGRSPARRARDVLGALRLVLFAPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQ--G 178 DL LV GDPA RRRYLDDL +RQP A VR DY++V+RQR ALL++ AR G Sbjct: 121 DLELVRGDPAQRRRYLDDLLVLRQPRYAGVRTDYERVVRQRNALLRTAYLARKTGGTRGG 180 Query: 179 VLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGG 238 L TL VWD LA HGAEL+A R+DLV LAP V +AY +A G+ A I+YR+S+++ Sbjct: 181 DLSTLAVWDDHLARHGAELLAGRLDLVAALAPHVNRAYDAVAAGAGAAGIAYRSSVELAS 240 Query: 239 IAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGES 298 ++DRA L A L L+ R E+ERG LVGPHRDEL L LG PAKG+ASHGES Sbjct: 241 ----STADRADLTAALSDALAAGRTAEIERGTTLVGPHRDELTLTLGPLPAKGYASHGES 296 Query: 299 WSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQED 358 WS DG EPVL+LDDVFAELD R LA + A Q+LVT A +ED Sbjct: 297 WSFALALRLAGYDLLRADGIEPVLVLDDVFAELDTGRRDRLAELVGDASQLLVTCAVEED 356 Query: 359 IP 360 +P Sbjct: 357 LP 358 >sp|C3PE74|RECF_CORA7 Tax_Id=548476 (recF)RecName: Full=DNA replication and repair protein recF;[Corynebacterium aurimucosum] Length = 392 Score = 341 bits (875), Expect = 8e-92 Identities = 187/391 (47%), Positives = 251/391 (64%), Gaps = 14/391 (3%) Query: 1 VYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 +Y+R +RDFRSW + L L PG T+F G NG GKTN++EA+ Y+ LSSHRV D PL Sbjct: 1 MYIRDLDVRDFRSWPELTLRLKPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVAHDAPL 60 Query: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIXXXXXXXXXXXXSLVRGMREVVGVLRAVLFAPE 120 +R G A +S VN+GRE L I + ++ RE++GV++ VLF+PE Sbjct: 61 VRQGAHNARISATAVNQGRELTAHLLIKPHAANQAQINRTRLKSPRELLGVVKTVLFSPE 120 Query: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYR--SDQ- 177 DL+LV G+PA RR+YLDD+ R P +A V+ADYDKVL+QR ALLKS + + R SD Sbjct: 121 DLSLVRGEPAARRQYLDDIIASRTPRLAGVKADYDKVLKQRNALLKSASPSLRRGYSDSD 180 Query: 178 --GVLDTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLD 235 L TLDVWDT+L+ GA+++ AR+ LV++L + AY LAP SR A+I Y++++D Sbjct: 181 GASALATLDVWDTQLSSLGAQVIQARLALVDELRELIPAAYAGLAPESRPAAIDYKSTVD 240 Query: 236 IGGIAGVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASH 295 I SDR +++A +L L+T+R E+ERGI LVGPHRD+L L LG PAKGFASH Sbjct: 241 I--------SDREVIEAMMLTELATKRQREIERGISLVGPHRDDLVLNLGTSPAKGFASH 292 Query: 296 GESWSXXXXXXXXXXXXXXXDGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAA 355 GE+WS DG +P+L+LDDVFAELDA R L +A AEQVL+T+A Sbjct: 293 GETWSYAISLRLAEFNLLRQDGTDPILILDDVFAELDAKRREKLVRLAAGAEQVLITAAV 352 Query: 356 QEDIPVGWD-AKWVTVDLRDSDSGRVSVVYP 385 ED+P + TV +RD+D GR+S + P Sbjct: 353 DEDLPGNLQPIERFTVTVRDTDEGRISEIAP 383 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.320 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 2,551,942,278 Number of extensions: 94508337 Number of successful extensions: 329066 Number of sequences better than 10.0: 2298 Number of HSP's gapped: 333679 Number of HSP's successfully gapped: 2424 Length of query: 385 Length of database: 3,808,957,724 Length adjustment: 139 Effective length of query: 246 Effective length of database: 2,258,647,078 Effective search space: 555627181188 Effective search space used: 555627181188 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 81 (35.8 bits)