BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML0067c (121 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|Q9CDD1|Q9CDD1_MYCLE Tax_Id=1769 (hns)SubName: Full=Histone-li... 130 5e-29 tr|B8ZTT4|B8ZTT4_MYCLB Tax_Id=561304 (hns)SubName: Full=Histone-... 130 5e-29 tr|Q7TVI3|Q7TVI3_MYCBO Tax_Id=1765 (hns)SubName: Full=POSSIBLE H... 49 2e-04 tr|P96225|P96225_MYCTU Tax_Id=1773 (hns)SubName: Full=POSSIBLE H... 49 2e-04 tr|C6DP83|C6DP83_MYCTK Tax_Id=478434 SubName: Full=Histone-like ... 49 2e-04 tr|C1AIV8|C1AIV8_MYCBT Tax_Id=561275 (hns)SubName: Full=Putative... 49 2e-04 tr|A5U9I1|A5U9I1_MYCTA Tax_Id=419947 (hns)SubName: Full=Putative... 49 2e-04 tr|A1KQI7|A1KQI7_MYCBP Tax_Id=410289 (hns)SubName: Full=Possible... 49 2e-04 tr|A5WU74|A5WU74_MYCTF Tax_Id=336982 SubName: Full=Histone-like ... 49 2e-04 tr|A4KMW9|A4KMW9_MYCTU Tax_Id=395095 SubName: Full=Histone-like ... 49 2e-04 tr|A2VMM8|A2VMM8_MYCTU Tax_Id=348776 SubName: Full=Histone-like ... 49 2e-04 tr|Q745I1|Q745I1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 42 0.022 tr|A0Q982|A0Q982_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 42 0.022 tr|B2HMN8|B2HMN8_MYCMM Tax_Id=216594 (hns)SubName: Full=Histone-... 38 0.31 tr|A0PX30|A0PX30_MYCUA Tax_Id=362242 (hns)SubName: Full=Histone-... 38 0.31 >tr|Q9CDD1|Q9CDD1_MYCLE Tax_Id=1769 (hns)SubName: Full=Histone-like protein;[Mycobacterium leprae] Length = 121 Score = 130 bits (327), Expect = 5e-29 Identities = 74/121 (61%), Positives = 74/121 (61%) Query: 1 MADQQNPPNSEPDGTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQSLGLQQRIET 60 MADQQNPPNSEPDGTSTL NQSLGLQQRIET Sbjct: 1 MADQQNPPNSEPDGTSTLPAKKVPAKAAKAPAKKAPPKSPSFASPQAANQSLGLQQRIET 60 Query: 61 NGQLDVAKDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXXXXXXXHQLRR 120 NGQLDVAKDVAEQAQSAVEGASNPVPNGAEALEASNSP HQLRR Sbjct: 61 NGQLDVAKDVAEQAQSAVEGASNPVPNGAEALEASNSPVALVIALAIGLLALLLIHQLRR 120 Query: 121 R 121 R Sbjct: 121 R 121 >tr|B8ZTT4|B8ZTT4_MYCLB Tax_Id=561304 (hns)SubName: Full=Histone-like protein;[Mycobacterium leprae] Length = 121 Score = 130 bits (327), Expect = 5e-29 Identities = 74/121 (61%), Positives = 74/121 (61%) Query: 1 MADQQNPPNSEPDGTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQSLGLQQRIET 60 MADQQNPPNSEPDGTSTL NQSLGLQQRIET Sbjct: 1 MADQQNPPNSEPDGTSTLPAKKVPAKAAKAPAKKAPPKSPSFASPQAANQSLGLQQRIET 60 Query: 61 NGQLDVAKDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXXXXXXXHQLRR 120 NGQLDVAKDVAEQAQSAVEGASNPVPNGAEALEASNSP HQLRR Sbjct: 61 NGQLDVAKDVAEQAQSAVEGASNPVPNGAEALEASNSPVALVIALAIGLLALLLIHQLRR 120 Query: 121 R 121 R Sbjct: 121 R 121 >tr|Q7TVI3|Q7TVI3_MYCBO Tax_Id=1765 (hns)SubName: Full=POSSIBLE HISTONE-LIKE PROTEIN HNS;[Mycobacterium bovis] Length = 134 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 64 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 123 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 124 ALLLIRQLRRR 134 >tr|P96225|P96225_MYCTU Tax_Id=1773 (hns)SubName: Full=POSSIBLE HISTONE-LIKE PROTEIN HNS; SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 134 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 64 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 123 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 124 ALLLIRQLRRR 134 >tr|C6DP83|C6DP83_MYCTK Tax_Id=478434 SubName: Full=Histone-like protein hns;[Mycobacterium tuberculosis] Length = 141 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 71 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 130 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 131 ALLLIRQLRRR 141 >tr|C1AIV8|C1AIV8_MYCBT Tax_Id=561275 (hns)SubName: Full=Putative histone-like protein;[Mycobacterium bovis] Length = 134 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 64 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 123 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 124 ALLLIRQLRRR 134 >tr|A5U9I1|A5U9I1_MYCTA Tax_Id=419947 (hns)SubName: Full=Putative histone-like protein Hns;[Mycobacterium tuberculosis] Length = 134 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 64 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 123 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 124 ALLLIRQLRRR 134 >tr|A1KQI7|A1KQI7_MYCBP Tax_Id=410289 (hns)SubName: Full=Possible histone-like protein hns;[Mycobacterium bovis] Length = 134 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 64 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 123 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 124 ALLLIRQLRRR 134 >tr|A5WU74|A5WU74_MYCTF Tax_Id=336982 SubName: Full=Histone-like protein hns;[Mycobacterium tuberculosis] Length = 134 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 64 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 123 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 124 ALLLIRQLRRR 134 >tr|A4KMW9|A4KMW9_MYCTU Tax_Id=395095 SubName: Full=Histone-like protein hns;[Mycobacterium tuberculosis str. Haarlem] Length = 141 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 71 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 130 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 131 ALLLIRQLRRR 141 >tr|A2VMM8|A2VMM8_MYCTU Tax_Id=348776 SubName: Full=Histone-like protein hns;[Mycobacterium tuberculosis C] Length = 134 Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 52 LGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXX 110 + LQQRIETNGQL A KD A QA+S VEGA++ + A S+SP Sbjct: 64 VSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLL 123 Query: 111 XXXXXHQLRRR 121 QLRRR Sbjct: 124 ALLLIRQLRRR 134 >tr|Q745I1|Q745I1_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 136 Score = 42.0 bits (97), Expect = 0.022 Identities = 29/74 (39%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 49 NQSLGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXX 107 N G QR +TNG L A KD A QA+S VE A NPV A SP Sbjct: 63 NTPTGGGQRADTNGDLTAAAKDAAAQAKSTVEAADNPVAPAVVGPAAGQSPVPLIVAVAV 122 Query: 108 XXXXXXXXHQLRRR 121 QLRRR Sbjct: 123 SLLAILLIRQLRRR 136 >tr|A0Q982|A0Q982_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 136 Score = 42.0 bits (97), Expect = 0.022 Identities = 29/74 (39%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 49 NQSLGLQQRIETNGQLDVA-KDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXX 107 N G QR +TNG L A KD A QA+S VE A NPV A SP Sbjct: 63 NTPTGGGQRADTNGDLTAAAKDAAAQAKSTVEAADNPVAPAVVGPAAGQSPVPLIVAVAV 122 Query: 108 XXXXXXXXHQLRRR 121 QLRRR Sbjct: 123 SLLAILLIRQLRRR 136 >tr|B2HMN8|B2HMN8_MYCMM Tax_Id=216594 (hns)SubName: Full=Histone-like protein Hns;[Mycobacterium marinum] Length = 156 Score = 38.1 bits (87), Expect = 0.31 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 55 QQRIETNGQL-DVAKDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXXXXX 113 QQ+ NGQL + AKD A QA+S V+ A+NP+P A+ + S+S Sbjct: 90 QQQPSANGQLAEAAKDAAAQAKSTVDRANNPLPRVADE-QPSHSTVPLVVAIALSLLAML 148 Query: 114 XXHQLRRR 121 QLRRR Sbjct: 149 LIRQLRRR 156 >tr|A0PX30|A0PX30_MYCUA Tax_Id=362242 (hns)SubName: Full=Histone-like protein Hns;[Mycobacterium ulcerans] Length = 159 Score = 38.1 bits (87), Expect = 0.31 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 55 QQRIETNGQL-DVAKDVAEQAQSAVEGASNPVPNGAEALEASNSPXXXXXXXXXXXXXXX 113 QQ+ NGQL + AKD A QA+S V+ A+NP+P A+ + S+S Sbjct: 93 QQQPSANGQLAEAAKDAAAQAKSTVDRANNPLPRVADE-QPSHSTVPLVVAIALSLLAML 151 Query: 114 XXHQLRRR 121 QLRRR Sbjct: 152 LIRQLRRR 159 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.301 0.119 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 519,267,650 Number of extensions: 10266767 Number of successful extensions: 18207 Number of sequences better than 10.0: 15 Number of HSP's gapped: 18261 Number of HSP's successfully gapped: 15 Length of query: 121 Length of database: 3,808,957,724 Length adjustment: 88 Effective length of query: 33 Effective length of database: 2,827,466,092 Effective search space: 93306381036 Effective search space used: 93306381036 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.7 bits) S2: 75 (33.5 bits)