BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML0202 (405 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|O69546|O69546_MYCLE Tax_Id=1769 (MLCB2548.29c)SubName: Full=P... 651 0.0 tr|B8ZU29|B8ZU29_MYCLB Tax_Id=561304 SubName: Full=Putative unch... 651 0.0 tr|Q7TW17|Q7TW17_MYCBO Tax_Id=1765 SubName: Full=DNA POLYMERASE;... 535 e-150 tr|O06363|O06363_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE DNA PO... 535 e-150 tr|C6DMU5|C6DMU5_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 535 e-150 tr|C1AI96|C1AI96_MYCBT Tax_Id=561275 SubName: Full=DNA polymeras... 535 e-150 tr|A5U8W8|A5U8W8_MYCTA Tax_Id=419947 SubName: Full=DNA polymeras... 535 e-150 tr|A1KPX3|A1KPX3_MYCBP Tax_Id=410289 SubName: Full=DNA polymeras... 535 e-150 tr|Q7D554|Q7D554_MYCTU Tax_Id=1773 (holB)SubName: Full=DNA polym... 535 e-150 tr|A5WTK9|A5WTK9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 535 e-150 tr|Q744B4|Q744B4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 534 e-150 tr|A4KMB6|A4KMB6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 534 e-150 tr|A0PV82|A0PV82_MYCUA Tax_Id=362242 SubName: Full=Conserved pro... 526 e-147 tr|B2HJ77|B2HJ77_MYCMM Tax_Id=216594 SubName: Full=Conserved pro... 525 e-147 tr|A0QA63|A0QA63_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 516 e-144 tr|Q1B2I6|Q1B2I6_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 507 e-142 tr|A1UML2|A1UML2_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 507 e-142 tr|A4T5R0|A4T5R0_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 507 e-141 tr|A3Q717|A3Q717_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 507 e-141 tr|A0R5D5|A0R5D5_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 504 e-141 tr|A1TG65|A1TG65_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 500 e-139 tr|B1MGQ6|B1MGQ6_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA ... 450 e-124 tr|Q5Z2Y1|Q5Z2Y1_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p... 403 e-110 tr|Q0S8J2|Q0S8J2_RHOSR Tax_Id=101510 SubName: Full=Probable DNA-... 402 e-110 tr|C1BA08|C1BA08_RHOOB Tax_Id=632772 (holB)SubName: Full=DNA pol... 399 e-109 tr|D0LEI8|D0LEI8_9ACTO Tax_Id=526226 SubName: Full=DNA polymeras... 396 e-108 tr|C0ZNH0|C0ZNH0_RHOE4 Tax_Id=234621 (holB)SubName: Full=Putativ... 392 e-107 tr|C3JWH0|C3JWH0_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 392 e-107 tr|C2AJX9|C2AJX9_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 367 1e-99 tr|A4F6Q3|A4F6Q3_SACEN Tax_Id=405948 (holB)SubName: Full=DNA pol... 334 1e-89 tr|A4XBZ5|A4XBZ5_SALTO Tax_Id=369723 SubName: Full=DNA polymeras... 328 1e-87 tr|A8M5W5|A8M5W5_SALAI Tax_Id=391037 SubName: Full=DNA polymeras... 320 2e-85 tr|C6WFD1|C6WFD1_ACTMD Tax_Id=446462 SubName: Full=DNA-directed ... 320 3e-85 tr|C4DLA3|C4DLA3_9ACTO Tax_Id=446470 SubName: Full=DNA polymeras... 305 5e-81 tr|C8X989|C8X989_NAKMY Tax_Id=479431 SubName: Full=DNA-directed ... 301 1e-79 tr|C4LLH9|C4LLH9_CORK4 Tax_Id=645127 SubName: Full=DNA polymeras... 289 4e-76 tr|Q4JSS5|Q4JSS5_CORJK Tax_Id=306537 (holB)SubName: Full=DNA pol... 279 5e-73 tr|C8RUZ9|C8RUZ9_CORJE Tax_Id=525262 (holB)SubName: Full=DNA pol... 279 5e-73 tr|C7PWW6|C7PWW6_CATAD Tax_Id=479433 SubName: Full=DNA-directed ... 276 3e-72 tr|C7MQK6|C7MQK6_SACVD Tax_Id=471857 SubName: Full=DNA polymeras... 275 6e-72 tr|B1VI07|B1VI07_CORU7 Tax_Id=504474 SubName: Full=DNA polymeras... 255 8e-66 tr|B4VDJ3|B4VDJ3_9ACTO Tax_Id=465541 SubName: Full=DNA polymeras... 252 7e-65 tr|C4E3I2|C4E3I2_STRRS Tax_Id=479432 SubName: Full=DNA polymeras... 249 3e-64 tr|C5V9Z1|C5V9Z1_9CORY Tax_Id=553207 SubName: Full=DNA polymeras... 245 6e-63 tr|C9KBE1|C9KBE1_9MICO Tax_Id=446469 SubName: Full=DNA polymeras... 244 1e-62 tr|C8NXE7|C8NXE7_9CORY Tax_Id=585529 (holB)SubName: Full=DNA pol... 243 3e-62 tr|C0DZS4|C0DZS4_9CORY Tax_Id=566549 SubName: Full=Putative unch... 242 5e-62 tr|C0XU93|C0XU93_9CORY Tax_Id=525263 SubName: Full=DNA polymeras... 240 2e-61 tr|Q6NJR0|Q6NJR0_CORDI Tax_Id=1717 SubName: Full=Putative DNA po... 240 3e-61 tr|A3THU8|A3THU8_9MICO Tax_Id=313589 SubName: Full=ATPase;[Janib... 240 3e-61 >tr|O69546|O69546_MYCLE Tax_Id=1769 (MLCB2548.29c)SubName: Full=Putative uncharacterized protein ML0202; SubName: Full=Putative uncharacterized protein MLCB2548.29c;[Mycobacterium leprae] Length = 405 Score = 651 bits (1680), Expect = 0.0 Identities = 342/405 (84%), Positives = 342/405 (84%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQD RSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF Sbjct: 1 MSGVFTRLVGQDAVEAELLAAAKAARSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP Sbjct: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV Sbjct: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR Sbjct: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DAVVPS SVTG Sbjct: 241 DAVVPSRAYAVAEELVAAAEAEALVLTAERAEAETEELRTALGAGGTGKGTAGALRSVTG 300 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA Sbjct: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELRY 405 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELRY Sbjct: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELRY 405 >tr|B8ZU29|B8ZU29_MYCLB Tax_Id=561304 SubName: Full=Putative uncharacterized protein;[Mycobacterium leprae] Length = 405 Score = 651 bits (1680), Expect = 0.0 Identities = 342/405 (84%), Positives = 342/405 (84%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQD RSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF Sbjct: 1 MSGVFTRLVGQDAVEAELLAAAKAARSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP Sbjct: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV Sbjct: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR Sbjct: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DAVVPS SVTG Sbjct: 241 DAVVPSRAYAVAEELVAAAEAEALVLTAERAEAETEELRTALGAGGTGKGTAGALRSVTG 300 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA Sbjct: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELRY 405 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELRY Sbjct: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELRY 405 >tr|Q7TW17|Q7TW17_MYCBO Tax_Id=1765 SubName: Full=DNA POLYMERASE; EC=2.7.7.-;[Mycobacterium bovis] Length = 401 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 178 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 298 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 358 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|O06363|O06363_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE DNA POLYMERASE; EC=2.7.7.-;[Mycobacterium tuberculosis] Length = 401 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 178 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 298 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 358 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|C6DMU5|C6DMU5_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis] Length = 402 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 2 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 61 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 62 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 118 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 119 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 178 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 179 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 238 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 239 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 298 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 299 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 358 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 359 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 402 >tr|C1AI96|C1AI96_MYCBT Tax_Id=561275 SubName: Full=DNA polymerase III subunit delta; EC=2.7.7.7;[Mycobacterium bovis] Length = 401 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 178 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 298 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 358 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|A5U8W8|A5U8W8_MYCTA Tax_Id=419947 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium tuberculosis] Length = 401 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 178 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 298 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 358 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|A1KPX3|A1KPX3_MYCBP Tax_Id=410289 SubName: Full=DNA polymerase; EC=2.7.7.-;[Mycobacterium bovis] Length = 401 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 178 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 298 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 358 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|Q7D554|Q7D554_MYCTU Tax_Id=1773 (holB)SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 404 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 4 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 63 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 64 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 120 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 121 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 180 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 181 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 240 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 241 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 300 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 301 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 360 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 361 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 404 >tr|A5WTK9|A5WTK9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical DNA polymerase;[Mycobacterium tuberculosis] Length = 401 Score = 535 bits (1379), Expect = e-150 Identities = 286/404 (70%), Positives = 303/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DTANWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 178 ALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 298 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 358 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|Q744B4|Q744B4_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 401 Score = 534 bits (1375), Expect = e-150 Identities = 282/403 (69%), Positives = 303/403 (75%), Gaps = 3/403 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQD R D HS GTMTHAWLITGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQDAVKAELLGAARAARGDAGHSDAGAGTMTHAWLITGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCTAD G PGCGRC ACTTT+AGTHADVRRV+P+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTAD---GEPGCGRCHACTTTLAGTHADVRRVVPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PED+A+TLRSRCRHV Sbjct: 118 ATGNWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDVAITLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIARVL+DSDGL +TA+WAA VSGGHVG ARRLATDPEA+QRRERA GL+R Sbjct: 178 ALVTPSTEAIARVLVDSDGLTPETADWAASVSGGHVGRARRLATDPEARQRRERALGLVR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS G Sbjct: 238 DAATPSRAYAAAEELVAAAEAEAVVLTAERAEAETEELRTALGAGGTGKGTAGAMRGAAG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AIKDLER QKSRQTRASRDALDR LIDLATYFRDAL+ S+ AG+V+ NHPDMA+RVA LA Sbjct: 298 AIKDLERCQKSRQTRASRDALDRALIDLATYFRDALMASSGAGAVRANHPDMAERVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQEL 403 HA PERLLRCIEAVLECREALAVNVKPKFAVDA+VATIGQ+L Sbjct: 358 AHAPPERLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQQL 400 >tr|A4KMB6|A4KMB6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical DNA polymerase;[Mycobacterium tuberculosis str. Haarlem] Length = 401 Score = 534 bits (1375), Expect = e-150 Identities = 285/404 (70%), Positives = 302/404 (74%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVFTRLVGQ R D HS GTMTHAWL+TGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+ G PGCGRCRACTTT+AGTHADVRRVIP+GLSIGVDEMRAIV A+RRP Sbjct: 61 AAALQCTSG---GEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG+WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AIA+VL D DGL DT NWAA VSGGHVG ARRLATDP+A+QRRERA GL R Sbjct: 178 ALVTPSTHAIAQVLSDGDGLDPDTGNWAASVSGGHVGRARRLATDPQARQRRERALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+KDLERRQKSRQTRASRDALDR LIDLATYFRDALLV+A+AG V+ NHPDMADRVA LA Sbjct: 298 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PERLLRCIEAVL CREALAVNVKPKFAVDA+VATIGQELR Sbjct: 358 AHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|A0PV82|A0PV82_MYCUA Tax_Id=362242 SubName: Full=Conserved protein;[Mycobacterium ulcerans] Length = 401 Score = 526 bits (1355), Expect = e-147 Identities = 281/404 (69%), Positives = 301/404 (74%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVF RLVGQ RSD HS DG MTHAWLITGPPGSGRS+AA+CF Sbjct: 1 MSGVFARLVGQGAVESELLAAARSARSDSTHSSGFDGDMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+D G PGCGRCR+C TTMAGTHADVRRVIP+GLSIGVD+MRAIV ASRRP Sbjct: 61 AAALQCTSD---GDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG QIVLIEDADRLTEGAANALLKVVEEPP+STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 118 TTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTP AIA+VLID+DGLAA+TANWAA VSGGHVG ARRLATDPEA+QRRERA GL+R Sbjct: 178 ALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA P+ G Sbjct: 238 DAATPARAYAAAEELVAAAEAEALALTSDRAEAETEELRTALGAGGTGKGTAGTMRGSAG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AIKDLERRQKSR TRA+RDALDR LIDLATYFRDALLVSA A + NHPDMADRVA LA Sbjct: 298 AIKDLERRQKSRHTRAARDALDRALIDLATYFRDALLVSAKADQPRANHPDMADRVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HATPERLLRCIEAVL CREAL++NVKPKFAVDA+VA IGQ+LR Sbjct: 358 AHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLR 401 >tr|B2HJ77|B2HJ77_MYCMM Tax_Id=216594 SubName: Full=Conserved protein;[Mycobacterium marinum] Length = 405 Score = 525 bits (1351), Expect = e-147 Identities = 280/404 (69%), Positives = 301/404 (74%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVF RLVGQ RSD HS DG MTHAWLITGPPGSGRS+AA+CF Sbjct: 5 MSGVFARLVGQGAVESELLAAARSARSDSTHSSGFDGDMTHAWLITGPPGSGRSIAALCF 64 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+D G PGCGRCR+C TTMAGTHADVRRVIP+GLSIGVD+MRAIV ASRRP Sbjct: 65 AAALQCTSD---GDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRP 121 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 +TG QIVLIEDADRLTEGAANALLKVVEEPP+STVFLLCAPSV PEDIAVTLRSRCRHV Sbjct: 122 TTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHV 181 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTP AIA+VLID+DGLAA+TANWAA VSGGHVG ARRLATDPEA+QRRERA GL+R Sbjct: 182 ALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVR 241 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA P+ G Sbjct: 242 DAATPARAYAAAEELVAAAEAEALALTSDRAEAETEELRTALGAGGTGKGTAGTMRGSAG 301 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AIKDLERRQKSR TRA+RDALDR LIDLATYFRDALLVSA A + NHPDMADRVA LA Sbjct: 302 AIKDLERRQKSRHTRAARDALDRALIDLATYFRDALLVSAKADQPRANHPDMADRVAALA 361 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HATPERLLRCIEAVL CREAL++NVKPKFAVDA+VA IGQ+L+ Sbjct: 362 AHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405 >tr|A0QA63|A0QA63_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium avium] Length = 388 Score = 516 bits (1329), Expect = e-144 Identities = 270/378 (71%), Positives = 291/378 (76%), Gaps = 3/378 (0%) Query: 26 RSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTT 85 R D HS GTMTHAWLITGPPGSGRSVAA+CFAAALQCTAD G PGCGRC ACTT Sbjct: 13 RGDAGHSDAGAGTMTHAWLITGPPGSGRSVAALCFAAALQCTAD---GEPGCGRCHACTT 69 Query: 86 TMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALL 145 T+AGTHADVRRV+P+GLSIGVD MRAIV A+RRP+TG WQIV+IEDADRLTEGAANALL Sbjct: 70 TLAGTHADVRRVVPEGLSIGVDGMRAIVQIAARRPATGNWQIVVIEDADRLTEGAANALL 129 Query: 146 KVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTA 205 KVVEEPP STVFLLCAPSV PED+A+TLRSRCRHVALVTPS AIARVL+DSDGL +TA Sbjct: 130 KVVEEPPPSTVFLLCAPSVDPEDVAITLRSRCRHVALVTPSTEAIARVLVDSDGLTPETA 189 Query: 206 NWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXX 265 +WAA VSGGHVG ARRLATDPEA+QRRERA GL+RDA PS Sbjct: 190 DWAASVSGGHVGRARRLATDPEARQRRERALGLVRDAATPSRAYAAAEELVAAAEAEAVV 249 Query: 266 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVL 325 GAIKDLERRQKSRQTRASRDALDR L Sbjct: 250 LTAERAEAETEELRTALGAGGTGKGTAGAMRGAAGAIKDLERRQKSRQTRASRDALDRAL 309 Query: 326 IDLATYFRDALLVSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVN 385 IDLATYFRDAL+ S+ AG+V+ NHPDMA+RVA LA HA PERLLRCIEAVLECREALAVN Sbjct: 310 IDLATYFRDALMASSGAGAVRANHPDMAERVAALAAHAPPERLLRCIEAVLECREALAVN 369 Query: 386 VKPKFAVDALVATIGQEL 403 VKPKFAVDA+VATIGQ+L Sbjct: 370 VKPKFAVDAMVATIGQQL 387 >tr|Q1B2I6|Q1B2I6_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 402 Score = 507 bits (1306), Expect = e-142 Identities = 266/404 (65%), Positives = 294/404 (72%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 M+GVF+RLVGQ R D HS A GTMTHAWLITGPPGSGRS+AA+CF Sbjct: 1 MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT++ G PGCG CRACTTTMAGTHADVRR+IP+GLSIGVDEMR+IV ASRRP Sbjct: 61 AAALQCTSE---GVPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 TG WQIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRSRCRH+ Sbjct: 118 GTGRWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHI 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AI +VLI+ DG++ A WAA VSGGHVG ARRL D +A+ RR+RA L R Sbjct: 178 ALVTPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AI+DLE+RQKSRQTRASRDALDR LIDLATYFRDALLVS+ AG VQ NHPDMA++VA LA Sbjct: 298 AIRDLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PE+LLRCIEAVLECREALAVNVKPKFAVDA+VAT+GQ LR Sbjct: 358 AHAPPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401 >tr|A1UML2|A1UML2_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 402 Score = 507 bits (1306), Expect = e-142 Identities = 266/404 (65%), Positives = 294/404 (72%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 M+GVF+RLVGQ R D HS A GTMTHAWLITGPPGSGRS+AA+CF Sbjct: 1 MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT++ G PGCG CRACTTTMAGTHADVRR+IP+GLSIGVDEMR+IV ASRRP Sbjct: 61 AAALQCTSE---GVPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 TG WQIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRSRCRH+ Sbjct: 118 GTGRWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHI 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AI +VLI+ DG++ A WAA VSGGHVG ARRL D +A+ RR+RA L R Sbjct: 178 ALVTPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AI+DLE+RQKSRQTRASRDALDR LIDLATYFRDALLVS+ AG VQ NHPDMA++VA LA Sbjct: 298 AIRDLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PE+LLRCIEAVLECREALAVNVKPKFAVDA+VAT+GQ LR Sbjct: 358 AHAPPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401 >tr|A4T5R0|A4T5R0_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 404 Score = 507 bits (1305), Expect = e-141 Identities = 272/406 (66%), Positives = 298/406 (73%), Gaps = 5/406 (1%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSR-PAD-GTMTHAWLITGPPGSGRSVAAV 58 M+GVF+RLVGQD R D VH PA+ GTMTHAWLITGPPGSGRS+AA+ Sbjct: 1 MAGVFSRLVGQDTVEAELIAAARAARGDSVHDDDPAETGTMTHAWLITGPPGSGRSIAAL 60 Query: 59 CFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASR 118 CFAAALQCT++ G PGCG CRACTTTMAGTHADVRR+IP+GLSIGVD MRAIV ASR Sbjct: 61 CFAAALQCTSE---GRPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDAMRAIVQIASR 117 Query: 119 RPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCR 178 RP TG WQIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRSRCR Sbjct: 118 RPGTGRWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCR 177 Query: 179 HVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGL 238 HVALVTP AIA+VLID+DGL+A A WAA VSGGHVG ARRLATD EA++RR+RA GL Sbjct: 178 HVALVTPPVEAIAQVLIDADGLSAAEARWAASVSGGHVGRARRLATDDEARERRKRALGL 237 Query: 239 IRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV 298 RDA PS Sbjct: 238 ARDAATPSRAYAAAEELVATAEAEAKALTGDRNEAESEELRTALGAGGTGKGTAGTMRGA 297 Query: 299 TGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAV 358 GA+K+LE+RQKSRQTRASRDALDR LIDLATYFRDALLVSA A V NHPDMAD+VA Sbjct: 298 AGALKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSAGATDVVANHPDMADKVAA 357 Query: 359 LACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 LA HA P++LLRCIEAVLECREALAVNVKPKFAVDA+V T+GQ LR Sbjct: 358 LAAHAPPDKLLRCIEAVLECREALAVNVKPKFAVDAMVGTVGQALR 403 >tr|A3Q717|A3Q717_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 402 Score = 507 bits (1305), Expect = e-141 Identities = 267/404 (66%), Positives = 294/404 (72%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 M+GVF+RLVGQ R D HS A GTMTHAWLITGPPGSGRS+AA+CF Sbjct: 1 MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT++ G PGCG CRACTTTMAGTHADVRR+IP+GLSIGVDEMR+IV ASRRP Sbjct: 61 AAALQCTSE---GVPGCGDCRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 TG WQIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRSRCRHV Sbjct: 118 GTGRWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHV 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AI +VLI+ DG++ A WAA VSGGHVG ARRL D +A+ RR+RA L R Sbjct: 178 ALVTPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS TG Sbjct: 238 DAATPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 AI+DLE+RQKSRQTRASRDALDR LIDLATYFRDALLVS+ AG VQ NHPDMA++VA LA Sbjct: 298 AIRDLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA PE+LLRCIEAVLECREALAVNVKPKFAVDA+VAT+GQ LR Sbjct: 358 AHAPPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401 >tr|A0R5D5|A0R5D5_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium smegmatis] Length = 402 Score = 504 bits (1298), Expect = e-141 Identities = 268/404 (66%), Positives = 291/404 (72%), Gaps = 3/404 (0%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVF+RLVGQ R D HS A GTMTHAWLITGPPGSGRSVAA+CF Sbjct: 1 MSGVFSRLVGQHAVEQELVAAAAAARGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT+D G PGCG CRACTTTMAGTHADVRR++P+GLSI V EMR IV ASRRP Sbjct: 61 AAALQCTSD---GVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRP 117 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 TG WQ+V+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRSRCRH+ Sbjct: 118 GTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHI 177 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 AL TPS AIA VLI DGL + A WAA V GGHVG ARRLATDPEA++RR+RA GL R Sbjct: 178 ALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLAR 237 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 DA PS G Sbjct: 238 DAATPSRAYAAAEEMVAVAEAEAVALTADRNENETEELKTALGAGGTGKGTAGTMRGAAG 297 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A+K+LE+RQKSRQTRASRDALDR LIDLATYFRDALLVS+ A +V NHPDMA++VA LA Sbjct: 298 ALKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMAEKVAALA 357 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 HA P+RLLRCIEAVLECREALAVNVKPKFAVDA+VATIGQ LR Sbjct: 358 AHAAPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 >tr|A1TG65|A1TG65_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 407 Score = 500 bits (1287), Expect = e-139 Identities = 268/409 (65%), Positives = 292/409 (71%), Gaps = 8/409 (1%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPAD-----GTMTHAWLITGPPGSGRSV 55 M+GVF+RLVGQD R D H+ D GTMTHAWLITGPPGSGRS+ Sbjct: 1 MTGVFSRLVGQDAVETELTAAARAARGDSPHTSGLDVSGVTGTMTHAWLITGPPGSGRSI 60 Query: 56 AAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHE 115 AA+CFAAALQCT+D G PGCG CRAC TTMAGTHADVRR+IP+GLSIGVD MRAIV Sbjct: 61 AALCFAAALQCTSD---GTPGCGECRACATTMAGTHADVRRIIPEGLSIGVDAMRAIVQI 117 Query: 116 ASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRS 175 ASRRP TG WQIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRS Sbjct: 118 ASRRPGTGRWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRS 177 Query: 176 RCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERA 235 RCRHVALVTP AIARVLIDSDGL A WAA VSGGHVG ARRLATD A++RR+RA Sbjct: 178 RCRHVALVTPPVDAIARVLIDSDGLPEKDAEWAAAVSGGHVGRARRLATDERARERRQRA 237 Query: 236 FGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295 GL RDA PS Sbjct: 238 LGLARDAATPSRAYAAAEELVATAEAEAKALTEDRNEVEAEELRTALGAGGTGKGTAGTM 297 Query: 296 XSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADR 355 GA+K+LE+RQKSR TRASRDALDR LIDLATYFRDALLVS+ A V NHPDMA++ Sbjct: 298 RGAAGALKELEKRQKSRHTRASRDALDRALIDLATYFRDALLVSSGATDVVANHPDMAEK 357 Query: 356 VAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 VA +A HA+PE+LLRCIEAVLECREALAVNVKPKFAVDA+V T+GQ LR Sbjct: 358 VAAMAAHASPEKLLRCIEAVLECREALAVNVKPKFAVDAMVGTVGQALR 406 >tr|B1MGQ6|B1MGQ6_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA polymerase III, delta' subunit;[Mycobacterium abscessus] Length = 401 Score = 450 bits (1157), Expect = e-124 Identities = 249/407 (61%), Positives = 275/407 (67%), Gaps = 12/407 (2%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 MSGVF RLV Q R D G MTHAWL TGPPGSGRSVAA+CF Sbjct: 1 MSGVFGRLVDQGAVVSTLSSSALAARGDDA------GRMTHAWLFTGPPGSGRSVAALCF 54 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQC ++ GCG CR CTTTMAGTHADVRRV+P+GLSIGVDEMRAIV A RRP Sbjct: 55 AAALQCESE---DVAGCGACRPCTTTMAGTHADVRRVVPEGLSIGVDEMRAIVQAAWRRP 111 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 STG W +VLIEDADRLTEGA N LLKVVEEPP TVFLLCAPSV PEDI++TLRSRCRHV Sbjct: 112 STGRWLVVLIEDADRLTEGAGNVLLKVVEEPPPRTVFLLCAPSVDPEDISITLRSRCRHV 171 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 ALVTPS AAIA+VL+D DG+ A+ A WAA VSGGHVG ARRLATD +A+ RR +A GL R Sbjct: 172 ALVTPSVAAIAQVLVDRDGIDAEQAQWAASVSGGHVGRARRLATDEQARARRLKALGLAR 231 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 +A PS G Sbjct: 232 EAATPSRAYAAAEELVTSADAEAKELTAARNEAEEEELKTALGAGGTGKGAATALRGSAG 291 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVS---ANAGSVQPNHPDMADRVA 357 +KDLER+QKSRQTRASRDALDR LIDLATYFRDAL++S A G V +HPDMADR+ Sbjct: 292 VLKDLERKQKSRQTRASRDALDRTLIDLATYFRDALVLSFGAAGQGRVALHHPDMADRLG 351 Query: 358 VLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 + PE+LL+CIEAVLECREALAVNVKPKFA+DALVAT GQ LR Sbjct: 352 PMVDRVPPEQLLKCIEAVLECREALAVNVKPKFAIDALVATAGQALR 398 >tr|Q5Z2Y1|Q5Z2Y1_NOCFA Tax_Id=37329 SubName: Full=Putative DNA polymerase III delta' subunit;[Nocardia farcinica] Length = 410 Score = 403 bits (1035), Expect = e-110 Identities = 227/402 (56%), Positives = 257/402 (63%), Gaps = 11/402 (2%) Query: 1 MSGVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 ++GVF RLVGQD R+ V +G MTH+WL TGPPGSGRSVAA+CF Sbjct: 11 VAGVFDRLVGQDAVESELTAAAVAARAGSV-----EGAMTHSWLFTGPPGSGRSVAALCF 65 Query: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 AAALQCT G PGCGRC ACTTTMAGTH DVRRV+P+GLSI EMR IV ASRRP Sbjct: 66 AAALQCT---DPGTPGCGRCHACTTTMAGTHGDVRRVVPEGLSISTKEMREIVQIASRRP 122 Query: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 STG WQ+V+IEDADRLTE A N LLKVVEEPP TVFLLCAPSV PEDI+VTLRSRCRHV Sbjct: 123 STGRWQVVVIEDADRLTEAAGNVLLKVVEEPPERTVFLLCAPSVDPEDISVTLRSRCRHV 182 Query: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 LVTPS AAIA VL + DGL A TA WAA VSGGHVG ARRLATD A++RR+RA L Sbjct: 183 HLVTPSVAAIATVLRERDGLDAKTAEWAASVSGGHVGRARRLATDAHARERRQRALALAA 242 Query: 241 DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTG 300 A P G Sbjct: 243 AAARPGAAYAAADELVKAADDEAKEMSAERDEREREELATALGAGGTGKGAASATRGSAG 302 Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLV---SANAGSVQPNHPDMADRVA 357 +K+LERRQKSR TR RDALDR LID+A +RDAL V + +A +V HPDM +++ Sbjct: 303 VLKELERRQKSRATRTGRDALDRALIDVAGLYRDALAVRFAAHDADAVTLTHPDMTEQIH 362 Query: 358 VLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATI 399 LA PE LLR I+AVL CREAL +NVKP+FAV A+VAT+ Sbjct: 363 DLADRVPPEGLLRSIDAVLACREALDLNVKPRFAVAAMVATL 404 >tr|Q0S8J2|Q0S8J2_RHOSR Tax_Id=101510 SubName: Full=Probable DNA-directed DNA polymerase III delta prime subunit; EC=2.7.7.7;[Rhodococcus sp.] Length = 404 Score = 402 bits (1034), Expect = e-110 Identities = 227/401 (56%), Positives = 259/401 (64%), Gaps = 7/401 (1%) Query: 4 VFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAAA 63 VF RLVGQ+ R + +MTH+WL TGPPGSGRSVAA CFAAA Sbjct: 3 VFDRLVGQEDVEAELTAAATAARRGV---GAMGSSMTHSWLFTGPPGSGRSVAAQCFAAA 59 Query: 64 LQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPSTG 123 LQCT+D G PGCG C ACTT MAGTH DVR+V+P+GLSI V EMRAIV A+RRPSTG Sbjct: 60 LQCTSD---GVPGCGVCHACTTAMAGTHGDVRQVVPEGLSISVKEMRAIVQTAARRPSTG 116 Query: 124 YWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVALV 183 WQIV++EDADRLTEGAANALLKVVEEPP TVFLLCAPSV P+DI+VTLRSRCRHV LV Sbjct: 117 RWQIVVVEDADRLTEGAANALLKVVEEPPDRTVFLLCAPSVDPQDISVTLRSRCRHVHLV 176 Query: 184 TPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDAV 243 TPS +IA+VL + DGL A AA +SGGHVG ARRLATD A+ RR+ A L A+ Sbjct: 177 TPSADSIAKVLRERDGLDPADAQLAASISGGHVGRARRLATDLNAKVRRKDALDLAVAAL 236 Query: 244 VPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAIK 303 P+ G +K Sbjct: 237 RPATAFAAAEELVRSADAEAKEMSASRDEQETEELRTALGAGGTGKGAAGALRGSAGVLK 296 Query: 304 DLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLACHA 363 DLE+RQKSR TR RDALDR LIDLA +RDAL V+ + + NHPDMADR A LA Sbjct: 297 DLEKRQKSRATRTGRDALDRALIDLAGLYRDALAVAWKSNAA-ANHPDMADRAADLASRT 355 Query: 364 TPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 TPE LLRCIEAVLECREA+ VNVKP++AVDA+VAT+G R Sbjct: 356 TPEGLLRCIEAVLECREAITVNVKPQWAVDAMVATLGDAFR 396 >tr|C1BA08|C1BA08_RHOOB Tax_Id=632772 (holB)SubName: Full=DNA polymerase III delta' subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 404 Score = 399 bits (1026), Expect = e-109 Identities = 224/401 (55%), Positives = 259/401 (64%), Gaps = 7/401 (1%) Query: 4 VFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAAA 63 VF RLVGQ+ R + +MTH+WL TGPPGSGRSVAA CFAAA Sbjct: 3 VFDRLVGQEDVESELTAAATAARRGVGEM---GSSMTHSWLFTGPPGSGRSVAAQCFAAA 59 Query: 64 LQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPSTG 123 LQCT++ G PGCG C ACTT MAGTH DVR+V+P+GLSI V EMRA V A+RRPSTG Sbjct: 60 LQCTSE---GTPGCGVCHACTTAMAGTHGDVRQVVPEGLSISVKEMRATVQTAARRPSTG 116 Query: 124 YWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVALV 183 WQIV++EDADRLTEGAANALLKVVEEPP TVFLLCAPSV P+DI+VTLRSRCRH+ LV Sbjct: 117 RWQIVVVEDADRLTEGAANALLKVVEEPPDRTVFLLCAPSVDPQDISVTLRSRCRHIHLV 176 Query: 184 TPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDAV 243 TPS +IA+VL + DGL + A AA +SGGHVG ARRLATD A+ RR+ A L A+ Sbjct: 177 TPSADSIAKVLRERDGLDPEAAQLAASISGGHVGRARRLATDLNAKVRRKDALDLAVAAL 236 Query: 244 VPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAIK 303 P+ G +K Sbjct: 237 RPATAFAAAEELVRSADAEAKEMSAARDEQETEELRTALGAGGTGKGAAGALRGSAGVLK 296 Query: 304 DLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLACHA 363 DLE+RQKSR TR RDALDR LIDLA +RDAL V A + NHPDMADR A LA Sbjct: 297 DLEKRQKSRATRTGRDALDRALIDLAGLYRDALAV-AWKSTAAANHPDMADRAADLASRT 355 Query: 364 TPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 TPE LL+CIEAVLECREA+AVNVKP++AVDA+VA++G R Sbjct: 356 TPEGLLKCIEAVLECREAIAVNVKPQWAVDAMVASLGDAFR 396 >tr|D0LEI8|D0LEI8_9ACTO Tax_Id=526226 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Gordonia bronchialis DSM 43247] Length = 431 Score = 396 bits (1017), Expect = e-108 Identities = 217/380 (57%), Positives = 251/380 (66%), Gaps = 3/380 (0%) Query: 26 RSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTT 85 ++D V + +MTH+WL TGPPGSGRSVAA CFAAALQC AD GCG+CRAC T Sbjct: 49 QADDVCDAASRASMTHSWLFTGPPGSGRSVAATCFAAALQCQAD-DPADIGCGQCRACVT 107 Query: 86 TMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALL 145 MAGTHADVR + PDGL++ V MR IV ASRRP TG WQIV++EDADRLTE AANALL Sbjct: 108 VMAGTHADVRSIAPDGLTLSVKSMREIVQTASRRPGTGRWQIVIVEDADRLTEQAANALL 167 Query: 146 KVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTA 205 KVVEEPPS TVFLLCAPSV P+DI+VTLRSRCRHVAL +PS A I RVL+D DG+ A Sbjct: 168 KVVEEPPSRTVFLLCAPSVDPDDISVTLRSRCRHVALTSPSVADIERVLVDRDGIDPAQA 227 Query: 206 NWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXX 265 WAA V GGH+G ARRLATD +A+++RE A L R A V S Sbjct: 228 AWAASVCGGHIGRARRLATDADAREQREMALRLARAATVDSTAYKAAEELVRTAEAASKA 287 Query: 266 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVL 325 GAIK+LE+RQKSR+TR RD LDR L Sbjct: 288 IAAELNEPELEEMKTALGAGGTGKGTARAPRGSAGAIKELEKRQKSRETRVGRDVLDRAL 347 Query: 326 IDLATYFRDALLVSANAGSVQPNHPDMADRVAV-LACHATPERLLRCIEAVLECREALAV 384 +DLA FRDAL+V A V P HPD AD V + +A A PE+LL+C+EAVL CREAL V Sbjct: 348 VDLAALFRDALVVGVGA-QVTPMHPDKADDVVIPMAGFARPEQLLQCVEAVLACREALDV 406 Query: 385 NVKPKFAVDALVATIGQELR 404 NVKPKFAVDA+VA+IG +R Sbjct: 407 NVKPKFAVDAMVASIGLAMR 426 >tr|C0ZNH0|C0ZNH0_RHOE4 Tax_Id=234621 (holB)SubName: Full=Putative DNA polymerase III delta' subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 409 Score = 392 bits (1007), Expect = e-107 Identities = 221/402 (54%), Positives = 253/402 (62%), Gaps = 9/402 (2%) Query: 3 GVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAA 62 GVF RLVGQ R D S MTHAWL TGPPGSGRSVAA+CFAA Sbjct: 9 GVFGRLVGQHDVEQSLRDAALSARGDSSGSE-----MTHAWLFTGPPGSGRSVAALCFAA 63 Query: 63 ALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPST 122 ALQCT+D G PGCG C ACTTTM GTH DVRR+IPDGLSI V MR IV+ ASRRP+T Sbjct: 64 ALQCTSD---GAPGCGECHACTTTMGGTHGDVRRIIPDGLSISVKGMREIVNIASRRPTT 120 Query: 123 GYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVAL 182 G WQ++++EDADRLTEGAANALLKVVEEPP TV LLCAP+ PED++VTLRSRCRH+ L Sbjct: 121 GRWQVIVVEDADRLTEGAANALLKVVEEPPDRTVILLCAPTTDPEDMSVTLRSRCRHMPL 180 Query: 183 VTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDA 242 VTPS +IA+VLID DGL + A AA +SGGHVG ARRLATD A+ R+R+ L DA Sbjct: 181 VTPSVESIAQVLIDRDGLDPERARIAASISGGHVGRARRLATDESARDERQRSLRLAADA 240 Query: 243 VVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAI 302 + S G I Sbjct: 241 IGASTAYKAAENLVKSIEADTKAFYAELKEQELEELKVSLGGGGTGKGTAGTLRGSAGLI 300 Query: 303 KDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLACH 362 KDLE RQKSR TRA RD LDR LIDLA +RDAL S + S HPDMA + A LA Sbjct: 301 KDLEARQKSRDTRARRDLLDRTLIDLAGMYRDALSYSLGSTST-ATHPDMARQAAELAAR 359 Query: 363 ATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 +PE LL+CIEAVLECREA+ NVK ++A+DA+VA+IG R Sbjct: 360 TSPEGLLKCIEAVLECREAVDFNVKLQWALDAMVASIGAAFR 401 >tr|C3JWH0|C3JWH0_RHOER Tax_Id=596309 SubName: Full=DNA polymerase III subunit delta;[Rhodococcus erythropolis SK121] Length = 405 Score = 392 bits (1007), Expect = e-107 Identities = 221/402 (54%), Positives = 253/402 (62%), Gaps = 9/402 (2%) Query: 3 GVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAA 62 GVF RLVGQ R D S MTHAWL TGPPGSGRSVAA+CFAA Sbjct: 5 GVFGRLVGQHDVEQSLRDAALSARGDSSGSE-----MTHAWLFTGPPGSGRSVAALCFAA 59 Query: 63 ALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPST 122 ALQCT+D G PGCG C ACTTTM GTH DVRR+IPDGLSI V MR IV+ ASRRP+T Sbjct: 60 ALQCTSD---GAPGCGECHACTTTMGGTHGDVRRIIPDGLSISVKGMREIVNIASRRPTT 116 Query: 123 GYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVAL 182 G WQ++++EDADRLTEGAANALLKVVEEPP TV LLCAP+ PED++VTLRSRCRH+ L Sbjct: 117 GRWQVIVVEDADRLTEGAANALLKVVEEPPDRTVILLCAPTTDPEDMSVTLRSRCRHMPL 176 Query: 183 VTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDA 242 VTPS +IA+VLID DGL + A AA +SGGHVG ARRLATD A+ R+R+ L DA Sbjct: 177 VTPSVESIAQVLIDRDGLDPERARIAASISGGHVGRARRLATDESARDERQRSLRLAADA 236 Query: 243 VVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAI 302 + S G I Sbjct: 237 IGASTAYKAAENLVKSIEADTKAFYAELKEQELEELKVSLGGGGTGKGTAGTLRGSAGLI 296 Query: 303 KDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLACH 362 KDLE RQKSR TRA RD LDR LIDLA +RDAL S + S HPDMA + A LA Sbjct: 297 KDLEARQKSRDTRARRDLLDRTLIDLAGMYRDALSCSLGSTST-ATHPDMARQAAELAAR 355 Query: 363 ATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 +PE LL+CIEAVLECREA+ NVK ++A+DA+VA+IG R Sbjct: 356 TSPEGLLKCIEAVLECREAVDFNVKLQWALDAMVASIGAAFR 397 >tr|C2AJX9|C2AJX9_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 403 Score = 367 bits (942), Expect = 1e-99 Identities = 212/406 (52%), Positives = 254/406 (62%), Gaps = 12/406 (2%) Query: 4 VFTRLVGQDXXXXXXXXXXXXXRSDLVHSRP-----ADGTMTHAWLITGPPGSGRSVAAV 58 +F+RLVGQD R D+V S A MTHAWL TGPPGSGRSVAA Sbjct: 1 MFSRLVGQDAVVAELRAAAEAAR-DVVASGGTVADLAGSAMTHAWLFTGPPGSGRSVAAR 59 Query: 59 CFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASR 118 AAALQC + PGCG CRACTT +AGTHADVR + PDGLSI V +MR +V +ASR Sbjct: 60 ALAAALQCEDPAE---PGCGHCRACTTVLAGTHADVRAIAPDGLSIAVKQMREVVADASR 116 Query: 119 RPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCR 178 RPS G+WQIVLIEDADRLTE A NALLK+VEEPP+ T+ LLCAP+V PEDI+VTL+SRCR Sbjct: 117 RPSVGHWQIVLIEDADRLTEQAGNALLKMVEEPPAQTIVLLCAPTVDPEDISVTLKSRCR 176 Query: 179 HVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGL 238 HV LVTPS AIA VL + DG+ A+ A WAA V GGHVG A+RLATDPE+Q++R +A + Sbjct: 177 HVPLVTPSAPAIAAVL-ERDGIDAERAAWAAGVCGGHVGRAKRLATDPESQKQRRQALSV 235 Query: 239 IRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV 298 R A S Sbjct: 236 ARAATSEGVYGVVEQLLRDAESAAKEINADLNERETEELKTALGAGGTGRGTAGVMRGS- 294 Query: 299 TGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAV 358 G +KDLE+RQK+R TR+ RDALDR LIDLA FRDA LV + V HPD A++ + Sbjct: 295 AGQLKDLEKRQKARSTRSVRDALDRALIDLAALFRDA-LVQGSGAQVTLMHPDEAEQTSR 353 Query: 359 LACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 LA +A PE LLRC+E+VL+CREA+ +NVKP A+DA+ A + LR Sbjct: 354 LAGYARPEGLLRCVESVLDCREAIDLNVKPVVALDAMAAGVSSALR 399 >tr|A4F6Q3|A4F6Q3_SACEN Tax_Id=405948 (holB)SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 403 Score = 334 bits (856), Expect = 1e-89 Identities = 189/372 (50%), Positives = 226/372 (60%), Gaps = 7/372 (1%) Query: 29 LVHSRPAD-GTMTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTM 87 L PA G MTHAWL TGPPGSGRSVAA FAAALQCT+ G GCG C AC T Sbjct: 35 LARGEPAPAGAMTHAWLFTGPPGSGRSVAARSFAAALQCTS-----GEGCGHCSACRTVQ 89 Query: 88 AGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKV 147 AGTHADVR V+P+GLSI V EMR++V ++RRP+TG W++VLIED+DRLTEGA+NALLK Sbjct: 90 AGTHADVRVVVPEGLSISVSEMRSLVQASARRPTTGQWRVVLIEDSDRLTEGASNALLKA 149 Query: 148 VEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANW 207 VEEPP TVFLLCAPS PED++VT+RSRCR V L TP AIA VL + DG+ A W Sbjct: 150 VEEPPDRTVFLLCAPSDHPEDVSVTIRSRCRVVQLKTPRPDAIAEVLAERDGIEPRMAQW 209 Query: 208 AALVSGGHVGLARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXX 267 AA VSGGH+G ARRLATD EA++RRE + S Sbjct: 210 AASVSGGHIGRARRLATDGEARERREAVLSVPLGLRRFSDVFTAAGGLVKASETDAVAAN 269 Query: 268 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLID 327 AI++LE+RQKSR TR+ RDALD L+D Sbjct: 270 EDRNEAEKEELRTAMGAGGTGKGTAAATRGANAAIRELEKRQKSRATRSQRDALDLALVD 329 Query: 328 LATYFRDALLVSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVK 387 LA ++RD L+V + + + NHPD A V+ A T E LR +EAVL CR AL NVK Sbjct: 330 LAGFYRDVLVVRSGS-TAALNHPDFARSVSKAAAEWTSESTLRRLEAVLACRLALTQNVK 388 Query: 388 PKFAVDALVATI 399 P AV+A+ A + Sbjct: 389 PIIAVEAMAAAL 400 >tr|A4XBZ5|A4XBZ5_SALTO Tax_Id=369723 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Salinispora tropica] Length = 427 Score = 328 bits (840), Expect = 1e-87 Identities = 182/361 (50%), Positives = 218/361 (60%), Gaps = 6/361 (1%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAW+ TGPPGSGRSVAA FAAALQC G GCG C C TTMAGTHADVR V+ Sbjct: 70 MTHAWIFTGPPGSGRSVAARAFAAALQC-----GHGSGCGACPGCHTTMAGTHADVRLVV 124 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 PDGLSIGV+EMRA+V A+ PS G WQ+V+IEDADRLTE A NALLK VEEPP TVFL Sbjct: 125 PDGLSIGVNEMRALVLRAASTPSGGRWQVVVIEDADRLTEAAGNALLKAVEEPPPRTVFL 184 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGL 218 LCAPS+ P+DI+VT+RSRCR V L P+ AA+A VL+ DG+ D ANWAA + GHVG Sbjct: 185 LCAPSIHPDDISVTIRSRCRVVPLRQPAPAAVAEVLVRRDGVEPDVANWAAAAAQGHVGR 244 Query: 219 ARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278 ARRLA DP+A+ RR+ + R Sbjct: 245 ARRLARDPQARTRRDAVLAVPRQLTGVGAAIDAAAALIGAAEAEAAALVADTDAAERAAL 304 Query: 279 XXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLV 338 G +K+LERRQKSR TRA RDALDR L+DLA ++RDAL + Sbjct: 305 ETALGAGGTGRRAASAFRGAAGQVKELERRQKSRATRAQRDALDRALVDLAGFYRDALTM 364 Query: 339 SANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVAT 398 + A V+P H D A A + LR +EAVL CR A+ NVKP+ AV+A++ Sbjct: 365 ALGA-PVEPVHTDTATVAGAGARKWEADGALRRLEAVLACRAAIEANVKPRIAVEAMMLA 423 Query: 399 I 399 + Sbjct: 424 L 424 >tr|A8M5W5|A8M5W5_SALAI Tax_Id=391037 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Salinispora arenicola] Length = 424 Score = 320 bits (821), Expect = 2e-85 Identities = 179/361 (49%), Positives = 217/361 (60%), Gaps = 6/361 (1%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAW+ TGPPGSGRSVAA FAAALQC G GCG C C TTMAGTHADVR V+ Sbjct: 67 MTHAWIFTGPPGSGRSVAARAFAAALQCLH-----GTGCGSCPGCHTTMAGTHADVRLVV 121 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 P+GLSIGV+EMRA+V A+ PS G WQ+V+IEDADRLTE A NALLK VEEPP TVFL Sbjct: 122 PEGLSIGVNEMRALVLRAASTPSGGRWQVVVIEDADRLTEAAGNALLKAVEEPPPRTVFL 181 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGL 218 LCAPS P+DI+VT+RSRCR V L P+ AA+A VL+ DG+ D A WAA + GHVG Sbjct: 182 LCAPSTHPDDISVTIRSRCRVVPLRQPAPAAVAEVLVRRDGVELDVARWAAAAAQGHVGR 241 Query: 219 ARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278 ARRLA DPEA+ RR+ + R Sbjct: 242 ARRLARDPEARARRDAVLAVPRQLTGVGAAIDAAAALIGAAEAEAAASVADTDAAERAAL 301 Query: 279 XXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLV 338 G +K+LERRQKSR TRA RDALDR L+DLA ++RDAL + Sbjct: 302 ETALGAGGTGRGAAGAFRGAAGQVKELERRQKSRATRAQRDALDRALVDLAGFYRDALTM 361 Query: 339 SANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVAT 398 + +A V+P + D + A + LR +EAVL CR A+ NVKP+ AV+A++ Sbjct: 362 ALHA-PVEPVNTDTSTVAGAGARKWEADGALRRLEAVLACRTAIEANVKPRIAVEAMMLA 420 Query: 399 I 399 + Sbjct: 421 L 421 >tr|C6WFD1|C6WFD1_ACTMD Tax_Id=446462 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Actinosynnema mirum] Length = 399 Score = 320 bits (819), Expect = 3e-85 Identities = 181/397 (45%), Positives = 232/397 (58%), Gaps = 4/397 (1%) Query: 3 GVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAA 62 GV++ +VGQ + + PA G MTHAWL TGPPGSGR+ AA FA Sbjct: 4 GVWSEVVGQPDAVTVLSAAAEAAAAIVAGGTPAPGAMTHAWLFTGPPGSGRTEAARAFAG 63 Query: 63 ALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPST 122 ALQCTA D PGCG C C T +AGTHADVR V P+GLSI V+EMRA+V ++RRP++ Sbjct: 64 ALQCTA--ADDRPGCGVCAGCHTALAGTHADVRVVAPEGLSISVNEMRALVQVSARRPTS 121 Query: 123 GYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVAL 182 G WQ+V++ DADRLTEGA+NALLK VEEPP TVFLLCAPS P D++VT+RSRCR V L Sbjct: 122 GRWQVVIVADADRLTEGASNALLKAVEEPPDRTVFLLCAPSEHPYDVSVTIRSRCRVVRL 181 Query: 183 VTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDA 242 +P +A L + +G+A D A+W+A V+GG+V ARRLATD +++ RRE + Sbjct: 182 GSPKVPDVAAAL-EEEGVAPDLASWSASVTGGNVVRARRLATDEQSRLRRESVLAIPLAL 240 Query: 243 VVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAI 302 P+ GA+ Sbjct: 241 RRPADVFTCADDLVKAAEGDALSANEDRDEQERKALETAMGAGGTGKGTASATRGAKGAL 300 Query: 303 KDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLACH 362 KDLE+RQKSR TR RD+LD+ L+DLA ++RD +LV+A NHPD A A Sbjct: 301 KDLEKRQKSRATRTQRDSLDQALVDLAAFYRD-VLVTATGSEAALNHPDRAADARTAAAA 359 Query: 363 ATPERLLRCIEAVLECREALAVNVKPKFAVDALVATI 399 + E LR +EAVL CR AL NVKP+ AV+A++ T+ Sbjct: 360 WSRESTLRRLEAVLACRGALERNVKPRIAVEAMLTTL 396 >tr|C4DLA3|C4DLA3_9ACTO Tax_Id=446470 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Stackebrandtia nassauensis DSM 44728] Length = 389 Score = 305 bits (782), Expect = 5e-81 Identities = 176/399 (44%), Positives = 224/399 (56%), Gaps = 16/399 (4%) Query: 4 VFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGT-MTHAWLITGPPGSGRSVAAVCFAA 62 +F RL+GQ+ +D V + + MTHAWL TGPPGSGRSVAA FAA Sbjct: 5 IFDRLIGQEDTVQTL--------TDAVAAATSGAAGMTHAWLFTGPPGSGRSVAARAFAA 56 Query: 63 ALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPST 122 ALQC GCG C AC T + GTHADV VIPDG++IGV MR ++ A R P T Sbjct: 57 ALQCP------NQGCGSCPACHTVLGGTHADVTHVIPDGVTIGVSVMRDLIGTAQRAPGT 110 Query: 123 GYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVAL 182 G W++++IEDADRLTE A NALLK +EEPP TVFLLCAPS P +I+VT+RSRCR V L Sbjct: 111 GRWRVLVIEDADRLTEAAGNALLKSIEEPPERTVFLLCAPSSNPAEISVTIRSRCRLVPL 170 Query: 183 VTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDA 242 PS AA+AR+L DG+ A A + GHVG A+RLATDP+A+ RR+ G+ R Sbjct: 171 RQPSVAAVARLLETRDGVDPSLARLCASAAQGHVGRAKRLATDPQARDRRDTVLGVPRQL 230 Query: 243 VVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAI 302 G I Sbjct: 231 SSVGACFTAADAIIEASESEATDATKGQAEREIAELETALGKGGTGKGASKATRGNAGQI 290 Query: 303 KDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLACH 362 K+LERRQK R TRA RD LDR L+DLA ++RD L+ A V P HPD A+ V A Sbjct: 291 KELERRQKMRLTRAQRDTLDRALVDLAAFYRDVLIQGLGA-RVDPIHPDAAEAVTAAASR 349 Query: 363 ATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQ 401 +PE ++R I+A+L+CR A+ NV+P+ AV++++ + Q Sbjct: 350 WSPESVIRRIDAILQCRIAIDRNVRPRIAVESMMLKLWQ 388 >tr|C8X989|C8X989_NAKMY Tax_Id=479431 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Nakamurella multipartita] Length = 412 Score = 301 bits (771), Expect = 1e-79 Identities = 170/362 (46%), Positives = 214/362 (59%), Gaps = 9/362 (2%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAWL TGP GSGRSVAA FAAALQC GCG C C T A TH+DVR VI Sbjct: 49 MTHAWLFTGPAGSGRSVAARAFAAALQCA------DRGCGHCSHCRTVAAHTHSDVRAVI 102 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 P+GL+I V EMR +V A+R P+ G +QIVLIEDADRLTEGA+NALLK VEEP TVFL Sbjct: 103 PEGLTISVKEMRQVVQLAARSPAAGRYQIVLIEDADRLTEGASNALLKAVEEPAEHTVFL 162 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGL 218 LCAPS P+D++VT+RSRCR V L TPS AIA VL DG+ +TA+WAA V+ GHVG Sbjct: 163 LCAPSTHPDDVSVTIRSRCRVVGLRTPSAPAIADVLARRDGVDPETAHWAASVAAGHVGR 222 Query: 219 ARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278 ARRLA D +A+++R + L + Sbjct: 223 ARRLARDEQAREQRRQVLALPTSLASVADVFEQSAELLARAKGEASSMSQTRDAAEIEEL 282 Query: 279 XXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLV 338 G +K++ERRQKSR TR RD LDR L+DL+ ++RD L Sbjct: 283 KTALGAGGTGKGAVGAARGSAGVVKEMERRQKSRATRTERDVLDRALVDLSGFYRDVL-- 340 Query: 339 SANAGSVQP-NHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVA 397 + + GS P +PDM +V +A P+ L ++AVL CREA+ +NVKP+ A++A+V Sbjct: 341 ARSLGSTAPLLNPDMPGQVDAVAKRLGPDGALAAVDAVLACREAIELNVKPQIAIEAMVM 400 Query: 398 TI 399 + Sbjct: 401 AL 402 >tr|C4LLH9|C4LLH9_CORK4 Tax_Id=645127 SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Corynebacterium kroppenstedtii] Length = 452 Score = 289 bits (740), Expect = 4e-76 Identities = 159/367 (43%), Positives = 215/367 (58%), Gaps = 8/367 (2%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAWL TGPPG+GRSVAA FAA+L C ++ PGCG+C AC T +AGTH D+ ++ Sbjct: 82 MTHAWLFTGPPGAGRSVAAKAFAASLMC----KEETPGCGQCEACRTALAGTHTDIVTIV 137 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 P+G+ I V ++R ++ ASR P+T W++V++EDADRL + ANALLK +EEPP TVF+ Sbjct: 138 PEGVVIPVKQVRDMIEAASRMPTTAQWRVVIVEDADRLNDAGANALLKSIEEPPPRTVFI 197 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSD--GLAADTANWAALVSGGHV 216 LCAPS P+D+ VT+RSRCRHV + TPS + +L D GL +WAA VSGGHV Sbjct: 198 LCAPSTDPDDVHVTIRSRCRHVYIPTPSIDEVKHILADDTALGLTDKQIDWAASVSGGHV 257 Query: 217 GLARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 276 G A+RLA+D +A+ +R+RA + Sbjct: 258 GRAKRLASDDQARTQRQRALRVPEKVYQDGDAYLYTGELVASAKKEAEAATAERDEAELA 317 Query: 277 XXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDAL 336 GA+K+LE +QK+R+TR D LD L+D+A +RDAL Sbjct: 318 KLREALGVGAKGRGAAKAQRGSAGAMKELETKQKNRRTRMVIDLLDLSLMDIAGLYRDAL 377 Query: 337 LVSANAGS--VQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDA 394 +VS NAG V HPD A+ A LA TPE+LL+C++AV RE LA V+ + A+DA Sbjct: 378 MVSVNAGGGRVPAIHPDHANTAAELARRNTPEQLLQCVDAVRMGRELLASGVRQEGALDA 437 Query: 395 LVATIGQ 401 +V + Q Sbjct: 438 MVGRLRQ 444 >tr|Q4JSS5|Q4JSS5_CORJK Tax_Id=306537 (holB)SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Corynebacterium jeikeium] Length = 415 Score = 279 bits (713), Expect = 5e-73 Identities = 160/371 (43%), Positives = 207/371 (55%), Gaps = 14/371 (3%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTH+WL TGPPGSGRS+AA FA AL C GCG C C + AGTH D+ V Sbjct: 46 MTHSWLFTGPPGSGRSIAAKVFATALVCPHG------GCGECEQCRSAAAGTHPDILWVS 99 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 G+ + VDE+R +HEA+ P+ W++V++EDADRL + AANALLK VEEPP+ TVFL Sbjct: 100 TTGVVLTVDEIRGAIHEAANMPTVARWRVVVVEDADRLNDAAANALLKSVEEPPARTVFL 159 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSD--GLAADTANWAALVSGGHV 216 LCAPS P DIA+TLRSRCRHV + TPS AA+ VL+ GL A WAA VS GH+ Sbjct: 160 LCAPSTDPSDIAITLRSRCRHVYVPTPSPAAVKGVLLSDATLGLNETQAQWAADVSAGHI 219 Query: 217 GLARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 276 G AR LA+D A+ +R A L + P+ Sbjct: 220 GRARHLASDEAARTKRATALKLPQLVYEPNALYRFTSELVKKAEEEAASELEKLDQRERE 279 Query: 277 XXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDAL 336 +G +K+LE+ QK+R+TR +RD+LD LID+A +RDA+ Sbjct: 280 ELESSLGVGAKGKGAAKAQWGASGRMKELEKEQKNRRTRRTRDSLDLALIDIAGLYRDAM 339 Query: 337 LVSANA--GSVQP----NHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKF 390 L +A A G P HPDMA LA + L+ CI+AV+ECRE L NV+P+ Sbjct: 340 LQAAGAVDGDGVPVGGHQHPDMAATSKELARRNSASALVSCIDAVMECREVLGYNVRPEV 399 Query: 391 AVDALVATIGQ 401 A+DA+ + Q Sbjct: 400 ALDAMAGRLQQ 410 >tr|C8RUZ9|C8RUZ9_CORJE Tax_Id=525262 (holB)SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Corynebacterium jeikeium ATCC 43734] Length = 415 Score = 279 bits (713), Expect = 5e-73 Identities = 160/371 (43%), Positives = 207/371 (55%), Gaps = 14/371 (3%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTH+WL TGPPGSGRS+AA FA AL C GCG C C + AGTH D+ V Sbjct: 46 MTHSWLFTGPPGSGRSIAAKVFATALVCPHG------GCGECEQCRSAAAGTHPDILWVS 99 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 G+ + VDE+R +HEA+ P+ W++V++EDADRL + AANALLK VEEPP+ TVFL Sbjct: 100 TTGVVLTVDEIRGAIHEAANMPTVARWRVVVVEDADRLNDAAANALLKSVEEPPARTVFL 159 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSD--GLAADTANWAALVSGGHV 216 LCAPS P DIA+TLRSRCRHV + TPS AA+ VL+ GL A WAA VS GH+ Sbjct: 160 LCAPSTDPSDIAITLRSRCRHVYVPTPSPAAVKGVLLSDATLGLNETQAQWAADVSAGHI 219 Query: 217 GLARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 276 G AR LA+D A+ +R A L + P+ Sbjct: 220 GRARHLASDEAARTKRATALKLPQLVYEPNALFRFTSELVKKAEEEAASELEKLDQRERE 279 Query: 277 XXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDAL 336 +G +K+LE+ QK+R+TR +RD+LD LID+A +RDA+ Sbjct: 280 ELESSLGVGAKGKGAAKAQRGASGRMKELEKEQKNRRTRRTRDSLDLALIDIAGLYRDAM 339 Query: 337 LVSANA--GSVQP----NHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKF 390 L +A A G P HPDMA LA + L+ CI+AV+ECRE L NV+P+ Sbjct: 340 LQAAGAVDGDGVPVGGHQHPDMAATSKELARRNSASALVSCIDAVMECREVLGYNVRPEV 399 Query: 391 AVDALVATIGQ 401 A+DA+ + Q Sbjct: 400 ALDAMAGRLQQ 410 >tr|C7PWW6|C7PWW6_CATAD Tax_Id=479433 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Catenulispora acidiphila] Length = 395 Score = 276 bits (707), Expect = 3e-72 Identities = 174/406 (42%), Positives = 218/406 (53%), Gaps = 32/406 (7%) Query: 3 GVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAA 62 GV+T LVGQD +DLV + +G MTHAWL+TGPPGSGRS AA FAA Sbjct: 12 GVWTDLVGQDHIS-----------TDLVQAALGNG-MTHAWLLTGPPGSGRSTAARAFAA 59 Query: 63 ALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPST 122 ALQCT G PGCG C C T + GTH DV ++ D LSIGV + R +V +S PS+ Sbjct: 60 ALQCTTA---GEPGCGYCLGCRTVLDGTHPDVLQLATDQLSIGVADTRGLVRRSSMTPSS 116 Query: 123 GYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVAL 182 G WQ++LIEDADRLTE A N LLK VEEP T+++LCAP +D+ T+RSRCRH+ L Sbjct: 117 GRWQVLLIEDADRLTEAAGNVLLKAVEEPSPRTIWILCAP--GRDDMLPTIRSRCRHLLL 174 Query: 183 VTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDA 242 TP +A+A +L+ DG+ A AA + GH+G A+RLATD EA+ +R+ L Sbjct: 175 RTPPSSAVAEILVRRDGVDPIRAREAARAAQGHIGRAKRLATDDEARAKRKAVLAL---- 230 Query: 243 VVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGA- 301 S +V GA Sbjct: 231 --ASSLTDIGSALSAAQKLVDATIAEAKHDADERNVIETADMRLALGYQEGSRKAVPGAA 288 Query: 302 --IKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANA-----GSV-QPNHPDMA 353 +KDLE RQK R TR RDALD L+DLA ++RD L V A G V +P H D Sbjct: 289 GALKDLESRQKKRATRMQRDALDLALVDLAAFYRDVLAVQLGAIGGPGGDVTEPIHDDQY 348 Query: 354 DRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATI 399 V +A TPE LR IEAVL CR+A+ NV P AV+A+ + Sbjct: 349 AAVRKIAAAGTPEATLRRIEAVLACRKAVERNVAPLLAVEAMAVNL 394 >tr|C7MQK6|C7MQK6_SACVD Tax_Id=471857 SubName: Full=DNA polymerase III, delta prime subunit;[Saccharomonospora viridis] Length = 406 Score = 275 bits (704), Expect = 6e-72 Identities = 145/230 (63%), Positives = 170/230 (73%), Gaps = 7/230 (3%) Query: 4 VFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPAD-GTMTHAWLITGPPGSGRSVAAVCFAA 62 V+++LVGQ+ + LV R D G+MTHAWL TGPPGSGRSVAA FAA Sbjct: 14 VWSQLVGQEPAVETLSAAAESAAA-LVSGRTTDPGSMTHAWLFTGPPGSGRSVAARTFAA 72 Query: 63 ALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPST 122 ALQCT D GCGRC+ C TT+AGTHADV+ V+P+GLSI V EMRA+V A+RRP+T Sbjct: 73 ALQCTVD-----AGCGRCQGCHTTLAGTHADVKLVVPEGLSISVSEMRALVQAAARRPTT 127 Query: 123 GYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVAL 182 G WQIV+IEDADRLTEGA+NALLK VEEPP TVFLLCAPS P+DI++T+RSRCR V L Sbjct: 128 GRWQIVIIEDADRLTEGASNALLKAVEEPPERTVFLLCAPSDHPDDISITIRSRCRTVNL 187 Query: 183 VTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRR 232 TPS AIA VL++ DG+ + A WAA V GGHVG ARRLATD A+ RR Sbjct: 188 RTPSPEAIATVLVERDGIDPERARWAASVCGGHVGRARRLATDENARARR 237 Score = 95.1 bits (235), Expect = 1e-17 Identities = 48/99 (48%), Positives = 71/99 (71%), Gaps = 1/99 (1%) Query: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 A++ LE++QKSR TR RD LD L+DLA ++RD L++S+ + + NHPD+A++ A A Sbjct: 306 AVRALEKKQKSRATRTQRDTLDLALMDLAGFYRDVLVLSSGSDAAL-NHPDVAEQAAEAA 364 Query: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATI 399 TP LR +EAVL CR+A+A NVKP+ AV+A++ T+ Sbjct: 365 REWTPVSTLRRLEAVLACRDAIAWNVKPRVAVEAMLTTL 403 >tr|B1VI07|B1VI07_CORU7 Tax_Id=504474 SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Corynebacterium urealyticum] Length = 448 Score = 255 bits (651), Expect = 8e-66 Identities = 153/399 (38%), Positives = 202/399 (50%), Gaps = 41/399 (10%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTH+WL TGPPGSGRS+AA FA L C GCG C C + GTH D+ + Sbjct: 56 MTHSWLFTGPPGSGRSIAAKAFATGLVCP------NGGCGECEQCQSAATGTHPDIVWIA 109 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 G I V+++R ++ A+ P+ W++V++EDADRL E +NALLK VEEPP+ TVF+ Sbjct: 110 TTGSVIPVEDVREVISSAASMPTVSRWRVVVVEDADRLNEAGSNALLKSVEEPPAHTVFV 169 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLID--SDGLAADTANWAALVSGGHV 216 LCAPS P DI++TLRSRCRHV + TPS + VL+ S G+ + A WAA VSGGH+ Sbjct: 170 LCAPSTDPLDISITLRSRCRHVYIPTPSPQQVEDVLLQDASLGITQEQARWAAGVSGGHI 229 Query: 217 GLARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 276 G AR LA D A+ +R A L + + Sbjct: 230 GRARHLARDEAARTKRATALKLPQMVYEGARLFSFTSQLVAKATEEVAAQVEAVEAKERE 289 Query: 277 XXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDAL 336 G +K+LER QK+R+TR RDALD LID+ +RDA+ Sbjct: 290 ALEESLGVGAKGRGAAKAQRGSAGQMKELEREQKNRRTRMVRDALDLALIDVVGLYRDAM 349 Query: 337 LVSANAGSVQP-------------------------------NHPDMADRVAVLACHATP 365 L + AG+V+P HPDM LA +P Sbjct: 350 LQA--AGAVEPVGGSADAAEVATGDTDGTAAAAHGLQPVGGFQHPDMRATSGELARRNSP 407 Query: 366 ERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 E L+RCI+AV CRE L +NVKP+ A+DAL + + R Sbjct: 408 EALVRCIDAVSACRETLGMNVKPEVALDALGGALREACR 446 >tr|B4VDJ3|B4VDJ3_9ACTO Tax_Id=465541 SubName: Full=DNA polymerase III subunit delta;[Streptomyces sp. Mg1] Length = 403 Score = 252 bits (643), Expect = 7e-65 Identities = 156/369 (42%), Positives = 198/369 (53%), Gaps = 9/369 (2%) Query: 34 PADGTMTHAWLITGPPGSGRSVAAVCFAAALQCTADFQ--DGGPGCGRCRACTTTMAGTH 91 PA MTHAWL TGPPGSGRS AA FAAALQCT+ + G PGCG C C TT+ GTH Sbjct: 38 PAASKMTHAWLFTGPPGSGRSTAARAFAAALQCTSPDRALGGEPGCGFCDGCHTTLIGTH 97 Query: 92 ADVRRVIPDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEP 151 ADV V D LSIGV E R +V A P+ G WQ++++EDADRLTEGA N LLK VEEP Sbjct: 98 ADVEIVRTDLLSIGVKETRDLVRRAQLSPAVGRWQVIVLEDADRLTEGAGNVLLKAVEEP 157 Query: 152 PSSTVFLLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALV 211 TV+LLCAPS+ ED+ T+RSRCRH+ L TP +A+A VL+ DG+ A AA Sbjct: 158 APRTVWLLCAPSL--EDVLPTIRSRCRHLTLRTPPVSAVADVLVRRDGIDPAVAEAAARA 215 Query: 212 SGGHVGLARRLATDPEAQQRRERAFGL-IRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXX 270 + GH+G ARRLATD A+ RR L +R V Sbjct: 216 TQGHIGRARRLATDEAARARRAAVLKLPLRVDDVGGCLKAAQELIDAAAEDAKQVAEEVD 275 Query: 271 XXXXXXXXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLAT 330 V ++D ++R R+TR RD LD L DL Sbjct: 276 TKETEELRAALGAAAGTGGRMPRGTAGVMKELEDRQKR---RRTRTQRDTLDLALTDLTG 332 Query: 331 YFRDALLVSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKF 390 ++RD L + + N ++ + +A + PER LR IEA++ CR AL NV P Sbjct: 333 FYRDVLALQLGSAVAIANE-EIRQDLDRIARASGPERTLRRIEAIIACRSALDRNVAPLL 391 Query: 391 AVDALVATI 399 AV+A+ ++ Sbjct: 392 AVEAMTMSL 400 >tr|C4E3I2|C4E3I2_STRRS Tax_Id=479432 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Streptosporangium roseum DSM 43021] Length = 393 Score = 249 bits (637), Expect = 3e-64 Identities = 155/398 (38%), Positives = 198/398 (49%), Gaps = 12/398 (3%) Query: 3 GVFTRLVGQDXXXXXXXXXXXXXRSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCFAA 62 GVF LVGQ+ L A MTHAWL TGPPGSGR AA FAA Sbjct: 2 GVFDDLVGQERAAVALRRAAEGAAEMLAGGSGAG--MTHAWLFTGPPGSGREEAARAFAA 59 Query: 63 ALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRPST 122 AL C GCG C C G+H D+ V +GLS G+ E R ++ A+ P+ Sbjct: 60 ALFCPDQ------GCGHCDMCHQVAIGSHPDLEVVRTEGLSYGIKETRQLILRAAGAPTL 113 Query: 123 GYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHVAL 182 G W++VL E ADR+ E A+NALLK +EEPP TV+LLC PS P D+ +T+RSRCR V L Sbjct: 114 GRWRVVLFEGADRMPERASNALLKAIEEPPPKTVWLLCTPS--PADLVITIRSRCRVVTL 171 Query: 183 VTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIRDA 242 VTP AA+A L+ D + D A + A + GH+ ARRLA DPE + RRE + R Sbjct: 172 VTPPTAAVAHALVTRDNIPPDMAEFVARATQGHLARARRLALDPEMRARREAVLSIPRSL 231 Query: 243 V-VPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTGA 301 + V GA Sbjct: 232 IGVGECVIAAERLVDTAKKEADAVSSALDEGETAELRKIYGEGSSGKGLNKGLIRGGAGA 291 Query: 302 IKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLAC 361 IKDLE+ QKSR TR RD +D L+DL ++RD L + A N AD + LA Sbjct: 292 IKDLEKLQKSRATRTQRDVIDAALLDLVAFYRDVLAMQFGAHVELANEDRRAD-LEGLAR 350 Query: 362 HATPERLLRCIEAVLECREALAVNVKPKFAVDALVATI 399 + PE LR I+A++ CRE LA NV P+ AV+A+ ++ Sbjct: 351 SSGPEDTLRRIDAIMRCRERLAANVNPQMAVEAMTISL 388 >tr|C5V9Z1|C5V9Z1_9CORY Tax_Id=553207 SubName: Full=DNA polymerase III subunit delta;[Corynebacterium matruchotii ATCC 14266] Length = 364 Score = 245 bits (626), Expect = 6e-63 Identities = 150/362 (41%), Positives = 189/362 (52%), Gaps = 6/362 (1%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAWL TGPPGSGRS AAV FAAAL+CT G CG C C G H DV + Sbjct: 1 MTHAWLFTGPPGSGRSNAAVAFAAALECTDPHIIG---CGTCEQCRKVQRGAHTDVVHIT 57 Query: 99 PDGLSIGVDEMRA-IVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVF 157 P L+IGV+ MR +V A+ P+ G W+IV++++ADRLT+ AAN LLK VEEPP+ TV Sbjct: 58 PRELTIGVETMRTEVVTPAAMLPTVGKWRIVILDNADRLTDAAANTLLKTVEEPPAHTVI 117 Query: 158 LLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVG 217 +LCAPS PEDI TL SR RH+ + PS I +L +D A AA+ SG H+G Sbjct: 118 MLCAPSTDPEDIIPTLLSRSRHLYIPQPSIDDIVAILTRTDNATEADARRAAMASGNHIG 177 Query: 218 LARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 277 AR L E+Q RR L S Sbjct: 178 RARHLLHHQESQIRRTNILNLAELIFHGSQAFQAVTSLVKTATDEAKNSLAETNEQELEK 237 Query: 278 XXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALL 337 G IK+LE+ QK R+TRA RDALD L+DL +RDAL+ Sbjct: 238 LRTALGMGAKGRGAHKALRGSAGQIKELEKLQKRRETRAIRDALDTQLVDLIGIYRDALM 297 Query: 338 VSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVA 397 ++A+A V P HPDM L+ P LL CIEA+ CR+ + NV+ + A+DA+V Sbjct: 298 IAAHA-QVSPIHPDMQGLAGELSTIGEP-NLLACIEAISHCRDDITHNVRAETAMDAMVG 355 Query: 398 TI 399 I Sbjct: 356 RI 357 >tr|C9KBE1|C9KBE1_9MICO Tax_Id=446469 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Sanguibacter keddieii DSM 10542] Length = 378 Score = 244 bits (624), Expect = 1e-62 Identities = 147/367 (40%), Positives = 200/367 (54%), Gaps = 25/367 (6%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAWL+TGPPGSGRS AA FAAALQC GCG C ACTTT++GTHAD+ V Sbjct: 27 MTHAWLLTGPPGSGRSNAARAFAAALQCEQG------GCGHCHACTTTLSGTHADLTVVA 80 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 + ++I +DE+R+++ ASR PS G W+++L+EDADR+ E N LLK +EEPP TV+L Sbjct: 81 TEKVTIAIDEVRSLISLASRSPSQGRWRVILVEDADRMAERTTNVLLKAIEEPPPRTVWL 140 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGL 218 LCAPS P+D+ VT+RSRCR V L P A +A +L DG+ A +A + H+GL Sbjct: 141 LCAPS--PQDVMVTIRSRCRGVTLRIPPVADVAALLEARDGVDPVVALASARAAQSHIGL 198 Query: 219 ARRLATDPEAQQRRERAFGLIR------DAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXX 272 ARRLA D A+QRR + R DAV+ + Sbjct: 199 ARRLARDAGARQRRSSVLSIARRIRGVPDAVIAA----------GELVEVAQAEAKAATE 248 Query: 273 XXXXXXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYF 332 S+ +K LE QK R TR RD LDR ++DL + + Sbjct: 249 ERDATEKAELLRSLGADGGQTLPPSLRSQVKQLEDDQKRRATRRQRDVLDRSMVDLLSLY 308 Query: 333 RDALLVSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAV 392 RD L+V A V + ++A+ V LA +TPE+ +R ++A+ R L NV P A+ Sbjct: 309 RDVLVVQLGA-EVDLVNTEIAETVRTLAEESTPEQTVRRMDAIGVARTRLGGNVSPVLAL 367 Query: 393 DALVATI 399 +A+ + Sbjct: 368 EAMAIAL 374 >tr|C8NXE7|C8NXE7_9CORY Tax_Id=585529 (holB)SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Corynebacterium genitalium ATCC 33030] Length = 439 Score = 243 bits (620), Expect = 3e-62 Identities = 136/362 (37%), Positives = 187/362 (51%), Gaps = 4/362 (1%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTH+WL TGPPG+GRS AAV FAAAL C + GCG C+AC AG H DV ++ Sbjct: 49 MTHSWLFTGPPGAGRSTAAVAFAAALVCESPAD--ALGCGHCQACRDVFAGAHTDVVHIV 106 Query: 99 PDGLSIGVDEMR-AIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVF 157 P+G++I +D +R I+ A+R P+ W++++IEDADR + A A+LK VEEPP +TV Sbjct: 107 PEGMTISIDTVRDTIIPAATRLPTVANWRVIIIEDADRFSREAPEAILKTVEEPPETTVI 166 Query: 158 LLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVG 217 ++CAPS P+D +VTLRSRCRH+ + PS I R+L+ +G A A AA+ S H+G Sbjct: 167 IMCAPSTDPQDFSVTLRSRCRHLYVPAPSVDEIVRILVSEEGAAEPDARLAAVTSLRHIG 226 Query: 218 LARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 277 ARRL +Q+RR A + Sbjct: 227 RARRLVNSDASQKRRAAAINIAELVFHGDQAFQGVAALVKSADAEAKDAYASSDEEERKR 286 Query: 278 XXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALL 337 ++K+LE QK+R TR RD LD L+DLA +RDA++ Sbjct: 287 LENALGMGAKGKGAAKALRGTASSLKELEAAQKARGTRRLRDVLDLTLVDLAGIYRDAMI 346 Query: 338 VSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVA 397 S + G V HPD +A HA + C++AV ECR L NV P A + ++ Sbjct: 347 TS-SGGGVPLVHPDFEGLSTEIANHADLAGITECLDAVAECRARLHQNVMPVIAFNGMLG 405 Query: 398 TI 399 I Sbjct: 406 RI 407 >tr|C0DZS4|C0DZS4_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 364 Score = 242 bits (618), Expect = 5e-62 Identities = 149/362 (41%), Positives = 188/362 (51%), Gaps = 6/362 (1%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAWL TGPPGSGRS AAV FAAAL+CT G CG C C G H DV + Sbjct: 1 MTHAWLFTGPPGSGRSNAAVAFAAALECTNPHIIG---CGTCEQCRKVQRGAHTDVVHIT 57 Query: 99 PDGLSIGVDEMRA-IVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVF 157 P L+IGV+ MR +V A+ P+ G W+IV++++ADRLT+ AAN LLK VEEPP+ TV Sbjct: 58 PRELTIGVETMRTEVVTPAAMLPTVGKWRIVILDNADRLTDAAANTLLKTVEEPPAHTVI 117 Query: 158 LLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVG 217 +LCAPS PEDI TL SR RH+ + PS I +L +D A AA+ SG H+G Sbjct: 118 MLCAPSTDPEDIIPTLLSRSRHLYIPQPSIDDIVAILTRTDNATEADARRAAMASGNHIG 177 Query: 218 LARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 277 AR L E+Q RR L S Sbjct: 178 RARHLLHHQESQIRRTNILNLAELIFHGSQAFQAVTSLVKTATDEAKNSLAETNEQELEK 237 Query: 278 XXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALL 337 G IK+LE+ QK R+TRA RDALD L+DL +RDAL+ Sbjct: 238 LRTALGMGAKGRGAHKALRGSAGQIKELEKLQKRRETRAIRDALDTQLVDLIGIYRDALM 297 Query: 338 VSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVA 397 ++A+A V P HPDM L+ LL CIEA+ CR+ + NV+ + A+DA+V Sbjct: 298 IAAHA-QVSPIHPDMQGLAGELST-IGETNLLACIEAISHCRDDITHNVRAETAMDAMVG 355 Query: 398 TI 399 I Sbjct: 356 RI 357 >tr|C0XU93|C0XU93_9CORY Tax_Id=525263 SubName: Full=DNA polymerase III subunit delta; EC=2.7.7.7;[Corynebacterium lipophiloflavum DSM 44291] Length = 399 Score = 240 bits (613), Expect = 2e-61 Identities = 137/363 (37%), Positives = 188/363 (51%), Gaps = 4/363 (1%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 M+HAWL TGPPG+GRS AV FAAAL CT GCGRC C AG H DV ++ Sbjct: 36 MSHAWLFTGPPGAGRSTTAVAFAAALVCT---DPDVVGCGRCDNCRAVFAGAHTDVVHIV 92 Query: 99 PDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFL 158 P L I V+ +R IV++ASR P+ G W++++I++ADR + AA+A LK VEEPP+STV + Sbjct: 93 PKELVISVETVRGIVNQASRLPTVGAWRVIIIDEADRFSTAAADAFLKTVEEPPASTVII 152 Query: 159 LCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGL 218 L APS PED + LRSRCRH+ + PS + I R+L +G + + A AA S H+G Sbjct: 153 LSAPSTDPEDFSTMLRSRCRHLYVPAPSESEIVRLLTQEEGASEEVARLAAAASLRHIGR 212 Query: 219 ARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278 ARRL + AQ R + L Sbjct: 213 ARRLVRESGAQTHRAQVINLAELVFHGDAAFKAVGALVAAADKEAVAAHAEADSEERAAL 272 Query: 279 XXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLV 338 V ++K LE +QK+R TR +RD LD L+DLA +RDAL++ Sbjct: 273 ERALGMGAKGKGAAKALRGVASSVKQLETQQKARGTRRTRDVLDLALVDLAGIYRDALVL 332 Query: 339 SANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVAT 398 ++ A V HPD +A + E L+ C +A+ CR++L NV P A + ++ Sbjct: 333 ASGA-RVGLTHPDFEGLSREIAERVSVEGLVACQDAIARCRQSLDQNVTPVIAFNGMIGR 391 Query: 399 IGQ 401 I Q Sbjct: 392 IRQ 394 >tr|Q6NJR0|Q6NJR0_CORDI Tax_Id=1717 SubName: Full=Putative DNA polymerase III, delta' subunit;[Corynebacterium diphtheriae] Length = 421 Score = 240 bits (612), Expect = 3e-61 Identities = 143/362 (39%), Positives = 189/362 (52%), Gaps = 5/362 (1%) Query: 39 MTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVI 98 MTHAWL TGPPGSGRSVAAV FAAAL+CT GCGRC C + H DV ++ Sbjct: 57 MTHAWLFTGPPGSGRSVAAVAFAAALECTDPTM---VGCGRCEQCRAVLHDAHGDVLHIV 113 Query: 99 PDGLSIGVDEMRA-IVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVF 157 P LSI V+ MR +V A++RP+ G W++V++++ADRLT +ANALLK VEEPP+ TV Sbjct: 114 PRELSIPVEMMRDDVVEPAAKRPTVGQWRVVILDNADRLTPESANALLKTVEEPPAHTVI 173 Query: 158 LLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVG 217 +LCAPS P DI TLRSR RH+ + PS VL + A AA +GGH+G Sbjct: 174 ILCAPSTDPTDIIPTLRSRSRHLYVPQPSIDEAVAVLTRDGTIPEPAARLAAATTGGHIG 233 Query: 218 LARRLATDPEAQQRRERAFGLIRDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 277 AR LAT+ +AQ RR + Sbjct: 234 RARWLATNKDAQMRRSAVLNIAELVFHGDQAFRAGGSLVKQITKQAEAQLKEENEEEIDK 293 Query: 278 XXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALL 337 AI+DLE QK R+TR RD LD L+DL+ +RDA++ Sbjct: 294 LRNALGMGSRGKGVHKALRGADSAIRDLEALQKKRKTRFVRDHLDMALVDLSGIYRDAIM 353 Query: 338 VSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDALVA 397 +A +V HPD++ A LA L+ C++A+ CRE + NV+P+ A DA++ Sbjct: 354 THTHA-TVGLIHPDLSGLSAELAQRVPLAGLVACLDAITICREQIPNNVRPEAAFDAMLG 412 Query: 398 TI 399 I Sbjct: 413 RI 414 >tr|A3THU8|A3THU8_9MICO Tax_Id=313589 SubName: Full=ATPase;[Janibacter sp. HTCC2649] Length = 379 Score = 240 bits (612), Expect = 3e-61 Identities = 150/359 (41%), Positives = 197/359 (54%), Gaps = 14/359 (3%) Query: 38 TMTHAWLITGPPGSGRSVAAVCFAAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRV 97 +MTHAWL TGPPGSGRSVAA FAAALQC + GCG CR C T GTHADV + Sbjct: 26 SMTHAWLFTGPPGSGRSVAARAFAAALQCPSG------GCGECRECRTAADGTHADVDLI 79 Query: 98 IPDGLSIGVDEMRAIVHEASRRPSTGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVF 157 +GLSI V++ R +V A+ RPS G W+++++EDADRLTE AA+ALLK +EEP TV+ Sbjct: 80 ATEGLSIKVEQARDLVALAAHRPSVGTWRVIIVEDADRLTERAADALLKALEEPTPRTVW 139 Query: 158 LLCAPSVAPEDIAVTLRSRCRHVALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVG 217 +LCAPSV ED+ +T+RSR RHV L TPS A+A +L+ DG+ A +AA + HVG Sbjct: 140 MLCAPSV--EDVIITIRSRSRHVRLRTPSVEAVADLLVRRDGVDPPMAMYAARAAQCHVG 197 Query: 218 LARRLATDPEAQQRRERAFGLI-RDAVVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 276 LARRLA D A+ RR L + V Sbjct: 198 LARRLARDENARIRRHDVITLASKIRTVGDAIDAASDLSTIATEESQASSAERDAAEKAK 257 Query: 277 XXXXXXXXXXXXXXXXXXXXSVTGAIKDLERRQKSRQTRASRDALDRVLIDLATYFRDAL 336 VT KD QK+R TR SRD +DR L+DL + +RDAL Sbjct: 258 LLEVLGADPSARTQPPHIRSQVTSLEKD----QKARATRFSRDMVDRALVDLLSVYRDAL 313 Query: 337 LVSANAGSVQPNHPDMADRVAVLACHATPERLLRCIEAVLECREALAVNVKPKFAVDAL 395 ++ A + N D V +A +P R+L ++A+ RE +A NV+P A++A+ Sbjct: 314 VLHTGAPTALVNE-DARQTVQQVAQVLSPVRVLVAMDAIGTARERIAANVQPLLALEAM 371 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.321 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 2,490,810,487 Number of extensions: 96168998 Number of successful extensions: 289436 Number of sequences better than 10.0: 3873 Number of HSP's gapped: 286587 Number of HSP's successfully gapped: 4070 Length of query: 405 Length of database: 3,808,957,724 Length adjustment: 140 Effective length of query: 265 Effective length of database: 2,247,493,764 Effective search space: 595585847460 Effective search space used: 595585847460 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 81 (35.8 bits)