BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML0717c
         (223 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|Q9CCL4|Q9CCL4_MYCLE Tax_Id=1769 SubName: Full=Putative TetR-f...   445   e-123
tr|B8ZUX5|B8ZUX5_MYCLB Tax_Id=561304 SubName: Full=Putative TetR...   445   e-123
tr|Q49662|Q49662_MYCLE Tax_Id=1769 SubName: Full=B1308_C2_181;[M...   445   e-123
tr|B2HDY1|B2HDY1_MYCMM Tax_Id=216594 SubName: Full=Transcription...   380   e-104
tr|A0PRK8|A0PRK8_MYCUA Tax_Id=362242 SubName: Full=Transcription...   380   e-104
tr|Q7TWS9|Q7TWS9_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC...   379   e-103
tr|P96900|P96900_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSC...   379   e-103
tr|C6DL32|C6DL32_MYCTK Tax_Id=478434 SubName: Full=Transcription...   379   e-103
tr|C1AH69|C1AH69_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   379   e-103
tr|A5U7W9|A5U7W9_MYCTA Tax_Id=419947 SubName: Full=TetR-family t...   379   e-103
tr|A1KNU7|A1KNU7_MYCBP Tax_Id=410289 SubName: Full=Probable tran...   379   e-103
tr|A5WSL0|A5WSL0_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   379   e-103
tr|A4KLJ1|A4KLJ1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   379   e-103
tr|A2VP91|A2VP91_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   379   e-103
tr|A0QKG9|A0QKG9_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...   366   1e-99
tr|Q73UF4|Q73UF4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   365   2e-99
tr|A4TF04|A4TF04_MYCGI Tax_Id=350054 SubName: Full=Transcription...   281   3e-74
tr|A1T5L9|A1T5L9_MYCVP Tax_Id=350058 SubName: Full=Transcription...   278   3e-73
tr|B1MFB8|B1MFB8_MYCA9 Tax_Id=561007 SubName: Full=Putative TetR...   189   2e-46
tr|Q9RD77|Q9RD77_STRCO Tax_Id=1902 SubName: Full=Putative TetR-f...   133   2e-29
tr|Q825N0|Q825N0_STRAW Tax_Id=33903 SubName: Full=Putative TetR-...   130   8e-29
tr|A0ADL0|A0ADL0_STRAM Tax_Id=278992 SubName: Full=Putative TetR...   126   2e-27
tr|Q0S7S2|Q0S7S2_RHOSR Tax_Id=101510 SubName: Full=Probable tran...   124   6e-27
tr|C1BBB9|C1BBB9_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...   122   2e-26
tr|B5HZ56|B5HZ56_9ACTO Tax_Id=463191 SubName: Full=TetR-family t...   120   8e-26
tr|C9Z1T8|C9Z1T8_STRSW Tax_Id=680198 SubName: Full=Putative TetR...   119   2e-25
tr|C0ZQC7|C0ZQC7_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR...   117   7e-25
tr|C3JV09|C3JV09_RHOER Tax_Id=596309 SubName: Full=TetR-family t...   117   9e-25
tr|C1AZP5|C1AZP5_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...    99   3e-19
tr|C7QEI6|C7QEI6_CATAD Tax_Id=479433 SubName: Full=Transcription...    99   3e-19
tr|A1SN12|A1SN12_NOCSJ Tax_Id=196162 SubName: Full=Regulatory pr...    97   1e-18
tr|Q0S3V0|Q0S3V0_RHOSR Tax_Id=101510 SubName: Full=Probable tran...    96   2e-18
tr|A4FHF6|A4FHF6_SACEN Tax_Id=405948 SubName: Full=Probable tran...    91   7e-17
tr|D0L9E9|D0L9E9_9ACTO Tax_Id=526226 SubName: Full=Regulatory pr...    88   8e-16
tr|Q5YQJ0|Q5YQJ0_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    87   1e-15
tr|A6G7W7|A6G7W7_9DELT Tax_Id=391625 SubName: Full=Putative tran...    82   3e-14
tr|C1A2J6|C1A2J6_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR...    82   4e-14
tr|C3JTJ5|C3JTJ5_RHOER Tax_Id=596309 SubName: Full=Regulatory pr...    82   4e-14
tr|C1WLT8|C1WLT8_9ACTO Tax_Id=479435 SubName: Full=Transcription...    82   6e-14
tr|C1AW54|C1AW54_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...    80   2e-13
tr|C9NEV4|C9NEV4_9ACTO Tax_Id=591167 SubName: Full=Transcription...    76   2e-12
tr|C2ABL9|C2ABL9_THECU Tax_Id=471852 SubName: Full=Transcription...    75   4e-12
tr|Q1D0Y9|Q1D0Y9_MYXXD Tax_Id=246197 SubName: Full=Transcription...    75   5e-12
tr|C2A847|C2A847_THECU Tax_Id=471852 SubName: Full=Transcription...    75   5e-12
tr|A9WVD0|A9WVD0_RENSM Tax_Id=288705 SubName: Full=Transcription...    74   1e-11
tr|C2A6A5|C2A6A5_THECU Tax_Id=471852 SubName: Full=Transcription...    74   1e-11
tr|Q5YWN7|Q5YWN7_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    74   2e-11
tr|C1WS40|C1WS40_9ACTO Tax_Id=479435 SubName: Full=Transcription...    73   3e-11
tr|B5H1A6|B5H1A6_STRCL Tax_Id=443255 SubName: Full=TetR-family t...    72   3e-11
tr|B5I203|B5I203_9ACTO Tax_Id=463191 SubName: Full=TetR-family t...    72   4e-11

>tr|Q9CCL4|Q9CCL4_MYCLE Tax_Id=1769 SubName: Full=Putative
           TetR-family transcriptional regulator;[Mycobacterium
           leprae]
          Length = 223

 Score =  445 bits (1144), Expect = e-123
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180

Query: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 223
           DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ
Sbjct: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 223


>tr|B8ZUX5|B8ZUX5_MYCLB Tax_Id=561304 SubName: Full=Putative
           TetR-family transcriptional regulator;[Mycobacterium
           leprae]
          Length = 223

 Score =  445 bits (1144), Expect = e-123
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180

Query: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 223
           DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ
Sbjct: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 223


>tr|Q49662|Q49662_MYCLE Tax_Id=1769 SubName:
           Full=B1308_C2_181;[Mycobacterium leprae]
          Length = 242

 Score =  445 bits (1144), Expect = e-123
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 20  MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 79

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV
Sbjct: 80  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 139

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM
Sbjct: 140 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 199

Query: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 223
           DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ
Sbjct: 200 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 242


>tr|B2HDY1|B2HDY1_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Probably TetR-family);[Mycobacterium
           marinum]
          Length = 224

 Score =  380 bits (976), Expect = e-104
 Identities = 190/224 (84%), Positives = 204/224 (91%), Gaps = 1/224 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLY AT+I  P G+TMFEE+R+GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYEATSIESPVGMTMFEEIRLGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPES-KLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIM+RIG VVS +P S  L   +ERDLRVI++GWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMTRIGQVVSGIPGSTALDQHVERDLRVIIYGWLAFTFEICRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 223
           MDP TDADRLAD+CAH LLD+IARVPEI  ELA+AMA AR  PQ
Sbjct: 181 MDPGTDADRLADACAHTLLDSIARVPEIPGELAEAMATARHTPQ 224


>tr|A0PRK8|A0PRK8_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein (Probably TetR-family);[Mycobacterium
           ulcerans]
          Length = 224

 Score =  380 bits (976), Expect = e-104
 Identities = 190/224 (84%), Positives = 204/224 (91%), Gaps = 1/224 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLY AT+I  P G+TMFEE+R+GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYEATSIESPVGMTMFEEIRLGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPES-KLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIM+RIG VVS +P S  L   +ERDLRVI++GWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMTRIGQVVSGIPGSTALDQHVERDLRVIIYGWLAFTFEICRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQPPQ 223
           MDP TDADRLAD+CAH LLD+IARVPEI  ELA+AMA AR  PQ
Sbjct: 181 MDPGTDADRLADACAHTLLDSIARVPEIPGELAEAMATARHTPQ 224


>tr|Q7TWS9|Q7TWS9_MYCBO Tax_Id=1765 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY
           TETR-FAMILY);[Mycobacterium bovis]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|P96900|P96900_MYCTU Tax_Id=1773 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY
           TETR-FAMILY); SubName: Full=Transcriptional regulator,
           TetR family;[Mycobacterium tuberculosis]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|C6DL32|C6DL32_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator, tetR-family;[Mycobacterium tuberculosis]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|C1AH69|C1AH69_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|A5U7W9|A5U7W9_MYCTA Tax_Id=419947 SubName: Full=TetR-family
           transcriptional regulator;[Mycobacterium tuberculosis]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|A1KNU7|A1KNU7_MYCBP Tax_Id=410289 SubName: Full=Probable
           transcriptional regulatory protein (Probably
           tetR-family);[Mycobacterium bovis]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|A5WSL0|A5WSL0_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein,
           tetR-family;[Mycobacterium tuberculosis]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|A4KLJ1|A4KLJ1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein (Probably
           tetR-family);[Mycobacterium tuberculosis str. Haarlem]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|A2VP91|A2VP91_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 221

 Score =  379 bits (973), Expect = e-103
 Identities = 188/220 (85%), Positives = 205/220 (93%), Gaps = 1/220 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSP+DRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPQDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLYAATN  P  G+TMFEE+R GVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYAATNKAPAPGMTMFEEIRTGVLAYMAYHQQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVP-ESKLHPDIERDLRVIVHGWLAFTFEVCRQRI 179
           LLGIDDEAKNRQMEHIMSRI +VVS +  ++ L P++ERDLRVI+HGWLAFTFE+CRQRI
Sbjct: 121 LLGIDDEAKNRQMEHIMSRIAEVVSGIDRDNTLDPEVERDLRVIIHGWLAFTFELCRQRI 180

Query: 180 MDPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           MDPSTDA+RLAD+CAHALLDAI+R+P+I  ELADAMA AR
Sbjct: 181 MDPSTDAERLADACAHALLDAISRLPQIPAELADAMATAR 220


>tr|A0QKG9|A0QKG9_MYCA1 Tax_Id=243243 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium avium]
          Length = 219

 Score =  366 bits (939), Expect = 1e-99
 Identities = 180/219 (82%), Positives = 201/219 (91%), Gaps = 1/219 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLY  TN+    GLTM+EE+RVGVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYENTNMDDVTGLTMYEEIRVGVLAYMAYHEQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           LLG++D+AKNRQMEHIMSRI  +++ VP + L PD+ER LRVI+HGWLAFTFE+CRQRI+
Sbjct: 121 LLGVEDDAKNRQMEHIMSRINQLLAEVP-ATLEPDVERHLRVILHGWLAFTFEICRQRII 179

Query: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           DP+TDAD+LAD+CAHALLDAI RVPEI +EL +AMA +R
Sbjct: 180 DPTTDADKLADACAHALLDAIGRVPEIPEELGEAMANSR 218


>tr|Q73UF4|Q73UF4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 219

 Score =  365 bits (937), Expect = 2e-99
 Identities = 179/219 (81%), Positives = 201/219 (91%), Gaps = 1/219 (0%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M TARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MATARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVVKDEADRLY  TN+    GLTM+EE+RVGVLAYMAYH+QNPEAAWAAYVGLGRSDPV
Sbjct: 61  AAVVKDEADRLYENTNMDDVTGLTMYEEIRVGVLAYMAYHEQNPEAAWAAYVGLGRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           LLG++D+AKNRQMEHIMSRI  +++ VP ++  PD+ER LRVI+HGWLAFTFE+CRQRI+
Sbjct: 121 LLGVEDDAKNRQMEHIMSRINQLLAEVPATR-EPDVERHLRVILHGWLAFTFEICRQRII 179

Query: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIAR 219
           DP+TDAD+LAD+CAHALLDAI RVPEI +EL +AMA +R
Sbjct: 180 DPTTDADKLADACAHALLDAIGRVPEIPEELGEAMANSR 218


>tr|A4TF04|A4TF04_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium gilvum]
          Length = 215

 Score =  281 bits (720), Expect = 3e-74
 Identities = 144/220 (65%), Positives = 170/220 (77%), Gaps = 5/220 (2%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M  ARRRLSP+DRR ELLALGAEVFG+RPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MAEARRRLSPDDRRNELLALGAEVFGQRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVV+ E++RL+ ATN P   G T+F +VR GVLAY+ Y + +P  AWAAY+G+ RSDPV
Sbjct: 61  AAVVRAESERLFDATNTPAQPGQTLFTQVRAGVLAYLRYDELHPHGAWAAYMGMSRSDPV 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           L GIDD   +RQ   I+ R+     V P   L   +ERDLR  V+GWLAFTFE+CRQR+M
Sbjct: 121 LRGIDDHDNDRQANRIIDRV--TAGVEP---LDAKVERDLRAAVYGWLAFTFEMCRQRLM 175

Query: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQ 220
           D S DAD L D CAHAL+DA+ARVP I  +LA+A+A  R+
Sbjct: 176 DASLDADYLGDLCAHALMDALARVPGIPADLAEAVAPDRR 215


>tr|A1T5L9|A1T5L9_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 216

 Score =  278 bits (711), Expect = 3e-73
 Identities = 140/220 (63%), Positives = 169/220 (76%), Gaps = 4/220 (1%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M   RRRLSP++RR+ELL LGAEVFG+RPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF
Sbjct: 1   MAGPRRRLSPDERRSELLTLGAEVFGQRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AAVV+ E +RL+ ATN PP  G T+F +VR GVLAY+ Y + +P  AWAAY+G+GRSDP+
Sbjct: 61  AAVVRAETERLFHATNTPPQPGQTLFAQVRAGVLAYLQYDEHHPHGAWAAYLGMGRSDPL 120

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           L GI+D   +RQ   I+ RI   V    +SKL    ERDLR  V+GWLAFTFE+CRQR+M
Sbjct: 121 LRGIEDIDNDRQANRIIDRITTAVGGGIDSKL----ERDLRATVYGWLAFTFEMCRQRLM 176

Query: 181 DPSTDADRLADSCAHALLDAIARVPEISKELADAMAIARQ 220
           D S DAD +A  CAH L+DA+ RVP I   LA+A+A+ R+
Sbjct: 177 DASLDADFIAGLCAHGLMDAVGRVPGIPAALAEAVAVDRR 216


>tr|B1MFB8|B1MFB8_MYCA9 Tax_Id=561007 SubName: Full=Putative
           TetR-family transcriptional regulator;[Mycobacterium
           abscessus]
          Length = 226

 Score =  189 bits (480), Expect = 2e-46
 Identities = 96/212 (45%), Positives = 144/212 (67%), Gaps = 5/212 (2%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRL+PEDRRAELL  G ++FG+R YD+VR+DE+AE+AGVSRAL+Y YFPDKRAF+ AV+
Sbjct: 16  RRRLTPEDRRAELLDFGTQLFGERHYDDVRMDEVAEQAGVSRALLYRYFPDKRAFYTAVM 75

Query: 65  KDEADRLYAAT-NIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLG 123
           + E DRLY AT ++     L+ FE +R  +L Y+ Y +++P A    +  +  +DP ++ 
Sbjct: 76  QAEYDRLYDATISLDMDQTLSGFERLRRTLLVYLHYQEEHPFAPVTVFRMIDSADPTVMA 135

Query: 124 IDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPS 183
           I+ +  ++Q + IM+    VV  V   ++ P +  DL+V++  WLAF  E+ RQR ++P 
Sbjct: 136 IEQQEYDKQTDRIMA----VVDHVAGDEMTPALVTDLKVVIRAWLAFNQELARQRALNPE 191

Query: 184 TDADRLADSCAHALLDAIARVPEISKELADAM 215
            D D LAD+ AHA++DA+ R+P I + + D M
Sbjct: 192 LDVDWLADTSAHAMIDAVRRMPNIPQAVVDLM 223


>tr|Q9RD77|Q9RD77_STRCO Tax_Id=1902 SubName: Full=Putative
           TetR-family transcriptional regulatory
           protein;[Streptomyces coelicolor]
          Length = 205

 Score =  133 bits (334), Expect = 2e-29
 Identities = 77/200 (38%), Positives = 118/200 (59%), Gaps = 10/200 (5%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRLS  +RR +LL++GA +F + PYDEV I+++AE AGVSR L+YHYFP+KR FFAAVV
Sbjct: 13  RRRLSTGERREQLLSVGARLFSESPYDEVWIEQVAEIAGVSRGLLYHYFPNKRDFFAAVV 72

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           + E++R+   T   P  G+ + E++  G+ AY+ Y + +     A +      D  +  +
Sbjct: 73  ERESERMLRMTAAVP--GVPVREQLTAGLDAYLEYVRAHAHGYRAFHRADAAGDRAVRRV 130

Query: 125 DDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIER--DLRVIVHGWLAFTFEVCRQRIMDP 182
             +A   Q   I++      ++  + +  P  E   D+R+ V GWLAFT  VC + + DP
Sbjct: 131 YQKALAAQERQILA------ALAADPEFGPAFEERGDVRLAVRGWLAFTTAVCLEWLRDP 184

Query: 183 STDADRLADSCAHALLDAIA 202
               +++ D CA ALL A+A
Sbjct: 185 EPAREQVRDLCARALLGAVA 204


>tr|Q825N0|Q825N0_STRAW Tax_Id=33903 SubName: Full=Putative
           TetR-family transcriptional regulator;[Streptomyces
           avermitilis]
          Length = 202

 Score =  130 bits (328), Expect = 8e-29
 Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 6/198 (3%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRLS E+RR +LL++GA +F + PYDEV I+++AE AGVSR L+YHYFP KR FFAAVV
Sbjct: 10  RRRLSTEERREQLLSVGARLFSESPYDEVWIEQVAEIAGVSRGLLYHYFPTKRDFFAAVV 69

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           + E+ R+   T   P  G+ + E++  G+  ++ Y + +     A +      D  +  +
Sbjct: 70  ERESGRMLRMTAAVP--GIPVREQLGAGLDVFLEYVEAHAHGFRAFHRADAAGDQAVRTV 127

Query: 125 DDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPST 184
             +A   Q   I++     ++  PE    P+ E +LR+ V GWLAFT  VC + +     
Sbjct: 128 YRQALAAQERQILA----ALAADPEIGRSPEEEPELRIAVRGWLAFTTAVCLEWLRGAEL 183

Query: 185 DADRLADSCAHALLDAIA 202
             +++ D CA ALL  IA
Sbjct: 184 TREQVRDLCARALLGVIA 201


>tr|A0ADL0|A0ADL0_STRAM Tax_Id=278992 SubName: Full=Putative
           TetR-family transcriptional regulatory
           protein;[Streptomyces ambofaciens ATCC 23877]
          Length = 202

 Score =  126 bits (317), Expect = 2e-27
 Identities = 75/198 (37%), Positives = 115/198 (58%), Gaps = 6/198 (3%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRLS  +RR +LL++GA +F + PYD+V I+++AE AGVSR L+YHYFP+KR FFAA+V
Sbjct: 10  RRRLSTGERREQLLSVGARLFSESPYDDVWIEQVAEIAGVSRGLLYHYFPNKRDFFAAIV 69

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           + E++R+   T   P  GL + E++  G+ AY+ Y + +     A +      D  +  +
Sbjct: 70  ERESERMLRMTAAVP--GLPVREQLTAGLDAYLEYVRAHAHGYRAFHRADAAGDQAVRRV 127

Query: 125 DDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPST 184
             +A   Q   I++     ++  PE         D+R+ V GWLAFT  VC + + +   
Sbjct: 128 YRKALAAQERQILA----ALAADPEFGPLFGERTDVRLAVRGWLAFTTAVCLEWLRESEP 183

Query: 185 DADRLADSCAHALLDAIA 202
             +++ D CA ALL AIA
Sbjct: 184 APEQVRDLCARALLGAIA 201


>tr|Q0S7S2|Q0S7S2_RHOSR Tax_Id=101510 SubName: Full=Probable
           transcriptional regulator, TetR family
           protein;[Rhodococcus sp.]
          Length = 194

 Score =  124 bits (312), Expect = 6e-27
 Identities = 78/198 (39%), Positives = 108/198 (54%), Gaps = 14/198 (7%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           MT+ARRRL+PE RRA+LL +GA +F  RPY++V I+E+AE A VSR LMYHYFP KR FF
Sbjct: 1   MTSARRRLAPEQRRAQLLDIGARLFADRPYEDVWIEEVAELAEVSRGLMYHYFPTKRDFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AA+V+ E++RL   T   P + L + E+V  G+ AY  +   +     A   G   +D  
Sbjct: 61  AAIVERESERLLDVT--APDSTLPVEEQVAAGLDAYFEHVASHRHGVRAINHGALSADAD 118

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDL-RVIVHGWLAFTFEVCRQRI 179
           +  I +   + Q   I+  +             PD ER+L  V V GW+AF   VC   +
Sbjct: 119 IRAIVERELDAQQRRIVDALDP-----------PDGERELVGVAVRGWIAFVRAVCMDWL 167

Query: 180 MDPSTDADRLADSCAHAL 197
             PS     L + C  +L
Sbjct: 168 DHPSIAEGELRELCLRSL 185


>tr|C1BBB9|C1BBB9_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 202

 Score =  122 bits (307), Expect = 2e-26
 Identities = 77/198 (38%), Positives = 108/198 (54%), Gaps = 14/198 (7%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           MT+ARRRL+PE RRA+LL +GA +F  RPY++V I+E+AE A VSR LMYHYFP KR FF
Sbjct: 9   MTSARRRLAPEQRRAQLLDIGARLFADRPYEDVWIEEVAELAEVSRGLMYHYFPTKRDFF 68

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AA+V+ E++RL   T   P + L + E+V  G+ AY  +   +     A   G   +D  
Sbjct: 69  AAIVERESERLLDVT--APDSTLPVEEQVAAGLDAYFEHVASHRHGVRAINHGALSADAD 126

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDL-RVIVHGWLAFTFEVCRQRI 179
           +  I +   + Q   I+  +             P+ ER+L  V V GW+AF   VC   +
Sbjct: 127 IRAIVERELDAQQRRIVDALDP-----------PEGERELVGVAVRGWIAFVRAVCMDWL 175

Query: 180 MDPSTDADRLADSCAHAL 197
             PS     L + C  +L
Sbjct: 176 DHPSIAEAELRELCLRSL 193


>tr|B5HZ56|B5HZ56_9ACTO Tax_Id=463191 SubName: Full=TetR-family
           transcriptional regulator;[Streptomyces sviceus ATCC
           29083]
          Length = 202

 Score =  120 bits (302), Expect = 8e-26
 Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 6/197 (3%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRLS E+RR +LL +GA +F + PYD+V I+++AE AGVSR L+YHYF  K+ FFAAVV
Sbjct: 10  RRRLSTEERREQLLTVGARLFSESPYDDVWIEQVAEIAGVSRGLLYHYFSTKQDFFAAVV 69

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           + E++R+ A T   P  G+ + E++  G+  Y+ Y   +     A +      D  +  +
Sbjct: 70  ERESERMLAMTAAVP--GVPVREQLTAGLDTYLEYVHTHAHGFRAFHRADAAGDQAVRRV 127

Query: 125 DDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPST 184
              A   Q   I++     ++  PE         DL++ V GWLAFT  VC + +     
Sbjct: 128 YQRALAAQERQILA----ALAADPEFGAQAQERPDLQLAVRGWLAFTTAVCLEWLRGSDL 183

Query: 185 DADRLADSCAHALLDAI 201
             +++ D CA ALL  +
Sbjct: 184 SREQVRDLCARALLGVL 200


>tr|C9Z1T8|C9Z1T8_STRSW Tax_Id=680198 SubName: Full=Putative
           TetR-family transcriptional regulatory
           protein;[Streptomyces scabies]
          Length = 202

 Score =  119 bits (298), Expect = 2e-25
 Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 6/197 (3%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRLS E+RR +LLA+GA +F + PYD+V I+++AE AGVSR L+YHYFP+KR FFAAVV
Sbjct: 10  RRRLSTEERREQLLAVGARLFSESPYDDVWIEQVAEIAGVSRGLLYHYFPNKRDFFAAVV 69

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           + E++R+     + P  G +  E +  G+ A++A+ +++     A +      D  +  +
Sbjct: 70  ERESERMLRI--MTPAPGRSARERLANGLDAFLAHVEEHAHGFRAFHRADATGDQAVRRV 127

Query: 125 DDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPST 184
              A   Q   I++ +        E +   D   ++R+ V GWLAFT  VC + +     
Sbjct: 128 YQRALAVQEAQILAALASDA----EFRAALDGRPEMRLAVRGWLAFTTAVCLEWLRGAEL 183

Query: 185 DADRLADSCAHALLDAI 201
             +++ D CA AL   +
Sbjct: 184 SREQVRDLCARALFGVL 200


>tr|C0ZQC7|C0ZQC7_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 195

 Score =  117 bits (294), Expect = 7e-25
 Identities = 76/201 (37%), Positives = 105/201 (52%), Gaps = 12/201 (5%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M   R+RL  E RR +LL +GA++F  R Y++V I+E+AE AGVSR LMYHYFP KR FF
Sbjct: 1   MVAPRKRLDREQRRTQLLDIGAQLFADRSYEDVWIEEVAEIAGVSRGLMYHYFPTKRDFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AA+V+ E+  L   T   P A L + E+V  G+ AY AY K +     A  VG   ++  
Sbjct: 61  AAIVERESQHLLEVT--APDATLPVREQVAAGLDAYFAYVKSHSRGVRAINVGTLSAEAG 118

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           +  I +    R++E    RI D +    E +      +   V V GW+AF   VC   + 
Sbjct: 119 IRAIVE----RELEQQQIRILDALEFEGERR------QIAAVAVRGWIAFVRAVCLDWLD 168

Query: 181 DPSTDADRLADSCAHALLDAI 201
            PS   + L   C   L  A+
Sbjct: 169 QPSIPQEELRVICLRTLSGAL 189


>tr|C3JV09|C3JV09_RHOER Tax_Id=596309 SubName: Full=TetR-family
           transcriptional regulatory protein;[Rhodococcus
           erythropolis SK121]
          Length = 195

 Score =  117 bits (293), Expect = 9e-25
 Identities = 76/201 (37%), Positives = 105/201 (52%), Gaps = 12/201 (5%)

Query: 1   MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFF 60
           M   R+RL  E RR +LL +GA++F  R Y++V I+E+AE AGVSR LMYHYFP KR FF
Sbjct: 1   MVAPRKRLDREQRRTQLLDIGAQLFADRSYEDVWIEEVAEIAGVSRGLMYHYFPTKRDFF 60

Query: 61  AAVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
           AA+V+ E+  L   T   P A L + E+V  G+ AY AY K +     A  VG   ++  
Sbjct: 61  AAIVERESQHLLEVT--APDATLPVREQVAAGLDAYFAYVKSHSRGVRAINVGTLSAEAG 118

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           +  I +    R++E    RI D +    E +      +   V V GW+AF   VC   + 
Sbjct: 119 IRAIVE----RELEQQQIRILDALGFEGERR------QLAAVAVRGWIAFVRAVCLDWLD 168

Query: 181 DPSTDADRLADSCAHALLDAI 201
            PS   + L   C   L  A+
Sbjct: 169 QPSIPQEELRVICLRTLSGAL 189


>tr|C1AZP5|C1AZP5_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 212

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 12/213 (5%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           R RLSPE RRA+L+ LGA++  +RP +++ +++IA++AGVSR L++HYF  K  F   +V
Sbjct: 6   RTRLSPEQRRAQLIDLGAKMLAERPLEQISVEDIADQAGVSRGLLFHYFASKHDFHLEIV 65

Query: 65  KDEADRLYAATNIPPPAGLTM--FEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLL 122
           +  +  + A T   P  G +    + +R  + +Y+ Y  +N     +   G    DP + 
Sbjct: 66  RHTSSEMLARTAPDPYVGESRDPMQILRSVLASYVDYVTENRGTYVSLLRGTASGDPDMR 125

Query: 123 GIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDP 182
            + ++ +    E  + ++       P   + P   R + + V GW+A+  EV    + DP
Sbjct: 126 AVFEQTRAVMSERTLEQL-------PAIGIEP--TRAVDLAVRGWIAYVEEVTITWLRDP 176

Query: 183 STDADRLADSCAHAL-LDAIARVPEISKELADA 214
               D L +    AL   AIA  PEI+  LA A
Sbjct: 177 HLTRDELIELNVQALPALAIAAAPEIAAALASA 209


>tr|C7QEI6|C7QEI6_CATAD Tax_Id=479433 SubName: Full=Transcriptional
           regulator, TetR family;[Catenulispora acidiphila]
          Length = 194

 Score = 99.0 bits (245), Expect = 3e-19
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)

Query: 2   TTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFA 61
           +  RRRL PE RR ELL  GAE F  +PYD+V +++IA   GVSRAL+Y YFP KR  FA
Sbjct: 3   SVTRRRLKPEQRREELLDAGAEFFATQPYDDVLMEDIAAHVGVSRALLYKYFPGKRELFA 62

Query: 62  AVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVL 121
           A+ +  A+RL   +++ P   L + E V   + A++ Y   +     AA   L   DP++
Sbjct: 63  AIYRRAAERLLENSHLDP--DLPLAETVSAALDAHIDYFAAHRLTVLAANRTLA-GDPMI 119

Query: 122 LGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMD 181
             I D+    ++  + +R+ D       ++           I+  WL F  E+C + +  
Sbjct: 120 QAIIDD----ELAVLRARMLDAAGFTGRAR------ETASAILRAWLVFVREMCVEWLQS 169

Query: 182 PSTDADRLADSCAHALLDAI 201
            + + D +   C   L  A+
Sbjct: 170 EAIERDEVRAVCLRTLSAAL 189


>tr|A1SN12|A1SN12_NOCSJ Tax_Id=196162 SubName: Full=Regulatory
           protein, TetR;[Nocardioides sp.]
          Length = 203

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 73/206 (35%), Positives = 100/206 (48%), Gaps = 11/206 (5%)

Query: 2   TTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFA 61
           TT R RL+PE RR++LL LG  +   R  DE+ ID +AE AG+SR L+YHYF +K AF  
Sbjct: 7   TTTRTRLTPEQRRSQLLDLGVRLLATRSLDELSIDLLAEEAGISRGLLYHYFGNKHAFHE 66

Query: 62  AVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVL 121
           AVV+  AD L A T  PP  G  M   V   + AY+ Y   N E   +        +  L
Sbjct: 67  AVVRRAADDLIAQT-APPSDGEPMVRLV-TSLAAYVDYVVANHEGYLSLVKAAAGGNETL 124

Query: 122 LGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMD 181
             I +EA+      I  R      ++P++ +        R++V GW A   E+    I  
Sbjct: 125 REIYEEARAALNSRIF-REDAQGEIIPDTPV-------TRLVVRGWSAMIEELVLSWIAA 176

Query: 182 P-STDADRLADSCAHALLDAIARVPE 206
           P     D+L D  A +L   +  VPE
Sbjct: 177 PGDLTRDQLLDILAASLPAIVETVPE 202


>tr|Q0S3V0|Q0S3V0_RHOSR Tax_Id=101510 SubName: Full=Probable
           transcriptional regulator, TetR family
           protein;[Rhodococcus sp.]
          Length = 212

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 12/213 (5%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           R RLSPE RRA+L+ LGA++  +RP +++ +++IA++AGVSR L++HYF  K  F   +V
Sbjct: 6   RTRLSPEQRRAQLIDLGAKMLAQRPLEQISVEDIADQAGVSRGLLFHYFASKHDFHLEIV 65

Query: 65  KDEADRLYAATNIPPPAG--LTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLL 122
           +  +  + A T   P  G      + +R  + +Y+ Y  +N     +   G    DP + 
Sbjct: 66  RHTSSEMLARTAPAPYIGDARDPMQILRSVLASYVDYVSENRGTYVSLLRGTASGDPDMR 125

Query: 123 GIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDP 182
            + +E +       + ++   + V P         R + + V GW+A+  EV    + DP
Sbjct: 126 AVFEETRAVMSARTLEQL-PAIGVEP--------TRAVELAVRGWIAYVEEVTITWLRDP 176

Query: 183 STDADRLADSCAHAL-LDAIARVPEISKELADA 214
               D L +    AL   AIA  PEI+  L  A
Sbjct: 177 HLTRDELIELNVQALPALAIAAAPEIAAALMSA 209


>tr|A4FHF6|A4FHF6_SACEN Tax_Id=405948 SubName: Full=Probable
           transcriptional regulator;[Saccharopolyspora erythraea]
          Length = 455

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 13/198 (6%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           R RL+P DRR +LL +GA +F +RPYD+V+I+EIA RAGVSR LMY YF  KR  F AVV
Sbjct: 3   RTRLNPSDRRDQLLRIGARLFAERPYDDVQIEEIAARAGVSRGLMYRYFATKRELFRAVV 62

Query: 65  KDEADRLYAATNI----PPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPV 120
              ++R+   T +      P   T  E +   V  ++     + +   A + G   +D  
Sbjct: 63  GRASERVAEGTALEASGTAPGTATPEERLTAQVEMFLDLFDTDADLMRALHAGTASADEE 122

Query: 121 LLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIM 180
           +  I  +   R  +H++    DV+  +  ++        LR  V  W+         R+ 
Sbjct: 123 VRRIIAQGARRHEDHVL----DVLEQLGSAR-----TAALRAAVRSWIVMARAGALDRLD 173

Query: 181 DPSTDADRLADSCAHALL 198
           +       L + C   LL
Sbjct: 174 NLDISRGELREICLRGLL 191



 Score = 38.1 bits (87), Expect = 0.71
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 3   TARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAA 62
           TARR  +    R  LL    +VF ++ +    I+++ +RAG SR   Y  F      F A
Sbjct: 257 TARRART----RQRLLDAALDVFAEQGFGRTTIEQVCDRAGYSRGAFYSNFSSLDELFLA 312

Query: 63  VVKDEADRLYA 73
           + +  +DR+ A
Sbjct: 313 MWEQRSDRMLA 323


>tr|D0L9E9|D0L9E9_9ACTO Tax_Id=526226 SubName: Full=Regulatory
           protein TetR;[Gordonia bronchialis DSM 43247]
          Length = 204

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 12/186 (6%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           R R+SPE RR +L+  G E+  +RP ++V I+ IAE AGVSRAL++HYF  K+ F  A+ 
Sbjct: 8   RTRMSPEARRDQLIEYGLEMVAQRPLEQVSIEAIAEAAGVSRALLFHYFESKQDFHVAIA 67

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           + +++R+ A T  P  +       ++  + A++ Y   N  A      G    DP +  +
Sbjct: 68  QTQSERMLACT-APDESLGDPLAILQSSMSAFVDYVSVNRSAYMTLIRGASSVDPAMRAV 126

Query: 125 DDEAKNRQMEHIMSRIGDV-VSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPS 183
            D  ++   + ++  +  + ++V P           + + V GW++F  E     + DP 
Sbjct: 127 FDSTRSVMAQRVLDHLPALGIAVTP----------TIEITVRGWMSFVEETTIGWLEDPR 176

Query: 184 TDADRL 189
              D L
Sbjct: 177 ISRDEL 182


>tr|Q5YQJ0|Q5YQJ0_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 214

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 11/211 (5%)

Query: 2   TTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFA 61
           T  R RLSPE+RR +L+ALGA + G+R  +++ + EIA  AG+SR L++HYFP K+ F  
Sbjct: 12  TAKRTRLSPEERRKQLIALGARMLGERAIEDISVSEIAAEAGISRGLLFHYFPTKQDFQL 71

Query: 62  AVVKDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVL 121
           A+V+     L     + P   L + + VR  +  Y+ Y  QN  +  A   G    +P L
Sbjct: 72  AIVRHANAEL--LERVTPDRTLGITDMVRDSIERYVDYVSQNRTSYLALLRGPTSVNPDL 129

Query: 122 LGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMD 181
             + +  ++  ++ I++         P      D  R L + + GW+AF  E     +  
Sbjct: 130 GPLVESTRDAIVQLILTE-------APIEVAETDRPR-LLLGMRGWIAFVEETTLTWLRT 181

Query: 182 PSTDADRLADSCAHALLD-AIARVPEISKEL 211
                ++L D    +LL+ A A  P+++  L
Sbjct: 182 EPIPREQLIDLLVDSLLNLAAALEPQLAAAL 212


>tr|A6G7W7|A6G7W7_9DELT Tax_Id=391625 SubName: Full=Putative
           transcriptional regulator;[Plesiocystis pacifica SIR-1]
          Length = 227

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 26/220 (11%)

Query: 7   RLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVVKD 66
           RL    RR +LL LG E+FG+R Y+ + ID+IA+ AG+SR L+YHYF +KR F+   V+ 
Sbjct: 17  RLDVGARRDQLLGLGLELFGQRSYESISIDDIAKAAGISRGLLYHYFRNKRGFYVESVRF 76

Query: 67  EA----DRLYAATNIPPPAGLTM----FEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRS- 117
            A    +R+ A  ++   AG          V +G+ AY+ +          AYV L RS 
Sbjct: 77  GASMLRERIVATRDLEARAGEGAEDPGHRRVELGLQAYLDF----VAGFGGAYVTLMRSG 132

Query: 118 ---DPVLLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAF---- 170
              DP +  I ++ +   +  ++  IG   +  PE++   ++   +RV   GWL      
Sbjct: 133 IGFDPEVCEILEQTRAAIVTEMLEAIG---ARAPETEAAREL---VRVAARGWLGMVEFA 186

Query: 171 TFEVCRQRIMDPSTDADRLADSCAHALLDAIARVPEISKE 210
           + E   ++ +  +   + L  S  HAL+ A  R+ + + E
Sbjct: 187 SLEWLERKAVPQAALIELLIQSLEHALVAAGVRLEDCAPE 226


>tr|C1A2J6|C1A2J6_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 209

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 13/194 (6%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           R RL P  RRA+L+ LGA +  +RP +++ +++IA++AGVSR L++HYF  K  F  A+V
Sbjct: 6   RTRLDPAQRRAQLIDLGARMLAERPLEQISVEDIADQAGVSRGLLFHYFASKSEFHLAIV 65

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           +  ++++   T   P         +R  + +Y+ Y  +N     +   G    DP +  +
Sbjct: 66  RHSSEQMLQRTE--PSESDDPMLTLRSVLASYVDYVTENRNTYVSLLRGTASGDPQMREV 123

Query: 125 DDEAKNRQMEHIMSRIGDV-VSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPS 183
            ++ ++   +  + ++  + ++  P+ +L           V GW+AF  E     +  P+
Sbjct: 124 FEQTRDIMAKRTLDQLPKIGLTRTPQVEL----------AVRGWIAFVEEATISWLRAPA 173

Query: 184 TDADRLADSCAHAL 197
              + L D    +L
Sbjct: 174 ITREELIDLTVQSL 187


>tr|C3JTJ5|C3JTJ5_RHOER Tax_Id=596309 SubName: Full=Regulatory
           protein, TetR;[Rhodococcus erythropolis SK121]
          Length = 211

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 13/194 (6%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           R RL P  RRA+L+ LGA +  +RP +++ +++IA++AGVSR L++HYF  K  F  A+V
Sbjct: 8   RTRLDPAQRRAQLIDLGARMLAERPLEQISVEDIADQAGVSRGLLFHYFASKSEFHLAIV 67

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           +  ++++   T   P         +R  + +Y+ Y  +N     +   G    DP +  +
Sbjct: 68  RHSSEQMLQRTE--PSESDDPMLTLRSVLASYVDYVTENRNTYVSLLRGTASGDPQMREV 125

Query: 125 DDEAKNRQMEHIMSRIGDV-VSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPS 183
            ++ ++   +  + ++  + ++  P+ +L           V GW+AF  E     +  P+
Sbjct: 126 FEQTRDIMAKRTLDQLPKIGLTRTPQVEL----------AVRGWIAFVEEATISWLRAPA 175

Query: 184 TDADRLADSCAHAL 197
              + L D    +L
Sbjct: 176 ITREELIDLTVQSL 189


>tr|C1WLT8|C1WLT8_9ACTO Tax_Id=479435 SubName: Full=Transcriptional
           regulator, COG1309;[Kribbella flavida DSM 17836]
          Length = 210

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 10/166 (6%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRL+ EDRR +L+ +G  +   +P  E+ +D +A  AG+SR L++HYFP KR F+ AV+
Sbjct: 18  RRRLTAEDRRKQLVGIGLMMLRTQPIHELSVDAVAAEAGISRGLLFHYFPTKRDFYVAVM 77

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
           +    RL   T  P PA L   E++R  +L+++A+  +  ++  +   G    D  ++ +
Sbjct: 78  RAAGRRLLRVT-APDPA-LPPPEQLRQMLLSFVAFINRRRDSYISFVRGAAGGDAFVVEV 135

Query: 125 DDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAF 170
             E +      +++ +    +  P S   PD     R+ VH WLA+
Sbjct: 136 YAETRAALTARVLALLDLADADRPAS---PD-----RLTVHAWLAY 173


>tr|C1AW54|C1AW54_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 202

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 11/188 (5%)

Query: 9   SPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVVKDEA 68
           SPEDRRA++L +   +    P+D++ ID++A  AGVS  L++HYF +K+ F  AV++  A
Sbjct: 7   SPEDRRAQILDVAVRLLETVPFDDLSIDQVAAEAGVSAPLLFHYFKNKQGFRNAVLEASA 66

Query: 69  DRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGIDDEA 128
             L     + P A L ++ ++R GV  +     ++P      Y+ + R    + G  DE 
Sbjct: 67  SEL--QRRMTPDATLPVYWQLRAGVETFAEAVIEHP----TIYLAVMR----MAGSGDE- 115

Query: 129 KNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPSTDADR 188
           + RQ+   M R     +VV  ++        L   V GW AF  E+    + +P+ +   
Sbjct: 116 RMRQIYRGMRRTFTRWTVVSLAEFGVPTTPALEAAVSGWQAFMEEIVLSWLDEPTMERSE 175

Query: 189 LADSCAHA 196
           + D C  A
Sbjct: 176 MIDLCERA 183


>tr|C9NEV4|C9NEV4_9ACTO Tax_Id=591167 SubName:
          Full=Transcriptional regulator, TetR
          family;[Streptomyces flavogriseus ATCC 33331]
          Length = 244

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/70 (51%), Positives = 48/70 (68%)

Query: 2  TTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFA 61
          T  RRR+  E+RRA+L+ +  E+F  R  D+V IDEIA  AG+SR L+YHYFP KR+ + 
Sbjct: 3  TRVRRRMGVEERRAQLIGVALELFSHRSPDDVSIDEIAAAAGISRPLVYHYFPGKRSLYE 62

Query: 62 AVVKDEADRL 71
          A +K  AD L
Sbjct: 63 AALKRAADEL 72


>tr|C2ABL9|C2ABL9_THECU Tax_Id=471852 SubName: Full=Transcriptional
           regulator, COG1309;[Thermomonospora curvata DSM 43183]
          Length = 212

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)

Query: 6   RRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVVK 65
           +RLS ++RR ++LA+   +F + PY EV  + IA  AGV R L+++YF  KR  F  VV+
Sbjct: 18  QRLSRDERRDQILAVARRMFTELPYAEVSTEAIASAAGVRRGLIHYYFRTKRELFLEVVR 77

Query: 66  DEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLG-RSDPVLLGI 124
           +   R+  A   PPP GL++ E V   V  ++   + N    +AA    G   DP L+ I
Sbjct: 78  ELTTRVAYAVQ-PPPKGLSLAETVEWCVERFLDAAEANATTWFAAVDAEGFGQDPELMRI 136

Query: 125 DDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPST 184
            +  ++  +E ++  +             PD    LR ++  +        R+ +   S 
Sbjct: 137 INRTRDLTVERLLKLLE-----------LPDPSDTLRAVLRAYSGLADAATREWLQQKSI 185

Query: 185 DADRLADSCAHALLDAIARV 204
           D  ++    A +LL  I  +
Sbjct: 186 DRKQVHTLLARSLLALITDI 205


>tr|Q1D0Y9|Q1D0Y9_MYXXD Tax_Id=246197 SubName: Full=Transcriptional
           regulator, TetR family;[Myxococcus xanthus]
          Length = 241

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 7/139 (5%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           ++RLS  DRR +L+A+G  VF  + Y+   I+E+A +AGVS+ ++Y +F  K   +AA+V
Sbjct: 32  KKRLSGADRRVQLMAVGRGVFASKGYEATSIEEVAHQAGVSKPIVYEHFGAKEGLYAAIV 91

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGI 124
             E D L    +    +G T  E     VLA+M Y K+ P    A +  + R  P+  G 
Sbjct: 92  DREMDDLVTRVSESIASG-TPRERFERAVLAFMTYAKEEP----AGFAVMTRDSPLAAG- 145

Query: 125 DDEAKNRQMEHIMSRIGDV 143
                 R ++ +  R+ D+
Sbjct: 146 -RRGLTRVIDDLALRVSDI 163


>tr|C2A847|C2A847_THECU Tax_Id=471852 SubName: Full=Transcriptional
           regulator, COG1309;[Thermomonospora curvata DSM 43183]
          Length = 225

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 20/165 (12%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           R R  P++RR ++L    E+F K PY+ V   +IA+ AGVSR L+ HYF  KR  + A V
Sbjct: 13  RVRKEPDERRDQILRCARELFSKHPYEAVSSAQIADAAGVSRGLLNHYFGTKRGLYLAAV 72

Query: 65  KDEADRLYAATNIPPP------AGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRS- 117
           +          ++PPP      AG T+ + V   + A++   ++N    W   + +  S 
Sbjct: 73  RQ-------MLSVPPPPVPAFVAGATVRDRVAQALDAWLELLERN-RGTWITALDMMASG 124

Query: 118 -DPVLLGIDDEAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLR 161
            D  L  I DEA++R     ++R+ ++V + P +  HP++   LR
Sbjct: 125 GDRELGRILDEARDR----AVARVTEIVGLTPLAAEHPEVLSALR 165


>tr|A9WVD0|A9WVD0_RENSM Tax_Id=288705 SubName: Full=Transcriptional
           regulator, TetR family;[Renibacterium salmoninarum]
          Length = 226

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 7/139 (5%)

Query: 6   RRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVVK 65
           +RLSP++RR ++ A   ++F + PY EV +  IA +AGV+R L+ HYF  KR  +  V++
Sbjct: 16  QRLSPDERREQIFACAKQLFSELPYAEVSLSHIASQAGVARGLVNHYFGSKREIYLEVIR 75

Query: 66  DEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYV---GLGRSDPVLL 122
           + A     A +       TM E V  GV  ++ Y  +N   AW + +   GLG+ DP L 
Sbjct: 76  NTA--TMPAMDFRSSTEGTMAERVDAGVAWFLDY-LENAGLAWLSAMSSNGLGK-DPELE 131

Query: 123 GIDDEAKNRQMEHIMSRIG 141
            I   A+N  ++ +M+ +G
Sbjct: 132 QILITAENVSVDRLMASMG 150


>tr|C2A6A5|C2A6A5_THECU Tax_Id=471852 SubName: Full=Transcriptional
           regulator, TetR family;[Thermomonospora curvata DSM
           43183]
          Length = 230

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRLS ++RR EL+    ++F  RP DEV ID++A  AG SRAL+YHYF  K   + A +
Sbjct: 19  RRRLSVDERRDELIEAALQLFSTRPPDEVSIDDVAVAAGASRALVYHYFGGKHELYVAAL 78

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGVLAYMAY 99
           +  A+RL  +  + PP      E +RV +  Y  +
Sbjct: 79  RSAANRL--SVLLEPPTEGKPLERLRVSLSRYFDF 111


>tr|Q5YWN7|Q5YWN7_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 208

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 13/143 (9%)

Query: 5   RRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVV 64
           RRRL P++RRA++LA   E+FG+RPY  V   E+A+R+GV+R L+ HYF +KR  + AVV
Sbjct: 11  RRRLEPDERRAQILARAIEMFGERPYAAVSTAELAQRSGVARGLINHYFGNKRDLYLAVV 70

Query: 65  KDEADRLYAATNIPPPAGLTMFEEVRVGV---LAYMAYHKQNPEAAW---AAYVGLGRSD 118
           +     L  A ++  P G T  E V   V   L  +A H     + W    ++ G+G  D
Sbjct: 71  R-RMVTLPRADDMIEPTG-TPRERVDASVRWLLDTIAEH----GSTWVKVTSHEGVG-DD 123

Query: 119 PVLLGIDDEAKNRQMEHIMSRIG 141
           P +  I DEA +   E  +  +G
Sbjct: 124 PEVQQILDEADDAAAERTLRMVG 146


>tr|C1WS40|C1WS40_9ACTO Tax_Id=479435 SubName: Full=Transcriptional
           regulator, COG1309;[Kribbella flavida DSM 17836]
          Length = 203

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 11/191 (5%)

Query: 7   RLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVVKD 66
           RL PE RRA++L     V    P+ ++ ++ +A  A VS AL++HYF  K+ F  AV++ 
Sbjct: 17  RLRPEARRAQILEAARRVLEADPHRDLSVELVAAEAKVSPALLFHYFGSKKNFQYAVIEA 76

Query: 67  EADRLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGIDD 126
            A  L   T   P   L   E++  G+ A++    + P+   A        DP +     
Sbjct: 77  AASELMLRT--APDLSLPPDEQLEAGIRAFVRAVLEAPQLYRATLAMSAAGDPAV----- 129

Query: 127 EAKNRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPSTDA 186
            A + ++  + SR   V+  + +  + P  + +L  + HGW  +  ++    I +P+  A
Sbjct: 130 RALHSELRQVFSRW--VIDALAQLGVEPTPKVEL--VCHGWQGYVEQILLTWIGNPAVSA 185

Query: 187 DRLADSCAHAL 197
           + L + C  +L
Sbjct: 186 EELEELCERSL 196


>tr|B5H1A6|B5H1A6_STRCL Tax_Id=443255 SubName: Full=TetR-family
           transcriptional regulator;[Streptomyces clavuligerus
           ATCC 27064]
          Length = 229

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 10  PEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFAAVVKDEAD 69
           P  RRAEL+A+G ++F   PYD + +D+IA +AGV++ L+Y+YF  KR ++ A+V+D   
Sbjct: 17  PRGRRAELIAVGRKLFAHTPYDALSMDDIARQAGVAKGLIYYYFASKRGYYLAIVEDSVA 76

Query: 70  RLYAATNIPPPAGLTMFEEVRVGVLAYMAYHKQNPEAAWAAYVGLGRSDPVLLGIDDEAK 129
            L +         L   E VR  V  Y+ Y + N  A      G    DP +  + D  +
Sbjct: 77  GLVSRAR--DRTELPGAERVRRTVDGYLRYAQNNGAAFRTITSGGVGFDPEVQSLRDSVR 134

Query: 130 NRQMEHIMSRIGDVVSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPSTDA-DR 188
               E + + I +      E      I    R+ + GWL    ++  + +  P+    ++
Sbjct: 135 ----EELTAAIAEGAYGTRE------IPPTARLALVGWLGSVEQIALEWLAHPAEPGREQ 184

Query: 189 LADSCAHALLDAIARVPE 206
           + +     L   +A V E
Sbjct: 185 VCELLTRLLAATLATVGE 202


>tr|B5I203|B5I203_9ACTO Tax_Id=463191 SubName: Full=TetR-family
          transcriptional regulator;[Streptomyces sviceus ATCC
          29083]
          Length = 229

 Score = 72.0 bits (175), Expect = 4e-11
 Identities = 36/82 (43%), Positives = 50/82 (60%)

Query: 2  TTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAGVSRALMYHYFPDKRAFFA 61
          T  RRR+  E+RR +L+ +  E+F +R  DEV IDEIA  AG+SR L+YHYFP K + + 
Sbjct: 3  TGVRRRMGVEERRQQLIGVALELFARRSPDEVSIDEIASAAGISRPLVYHYFPGKLSLYE 62

Query: 62 AVVKDEADRLYAATNIPPPAGL 83
          A +K  A+ L +    P    L
Sbjct: 63 AALKRAAEDLASRFEEPHQGSL 84


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.322    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 1,640,257,321
Number of extensions: 65224936
Number of successful extensions: 192003
Number of sequences better than 10.0: 7987
Number of HSP's gapped: 193126
Number of HSP's successfully gapped: 8039
Length of query: 223
Length of database: 3,808,957,724
Length adjustment: 132
Effective length of query: 91
Effective length of database: 2,336,720,276
Effective search space: 212641545116
Effective search space used: 212641545116
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)