BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML0778 (229 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|Q9CCI7|Q9CCI7_MYCLE Tax_Id=1769 SubName: Full=Putative unchar... 427 e-118 tr|B8ZQF6|B8ZQF6_MYCLB Tax_Id=561304 SubName: Full=Putative unch... 427 e-118 tr|Q7D5V2|Q7D5V2_MYCTU Tax_Id=1773 SubName: Full=S30AE family pr... 352 1e-95 tr|B2HEQ5|B2HEQ5_MYCMM Tax_Id=216594 SubName: Full=Conserved pro... 347 6e-94 tr|A0PRE6|A0PRE6_MYCUA Tax_Id=362242 SubName: Full=Conserved pro... 347 6e-94 tr|Q7TWX2|Q7TWX2_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 346 1e-93 tr|O05886|O05886_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 346 1e-93 tr|C6DXI7|C6DXI7_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 346 1e-93 tr|C1AH15|C1AH15_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 346 1e-93 tr|A5U7R5|A5U7R5_MYCTA Tax_Id=419947 SubName: Full=S30AE family ... 346 1e-93 tr|A1KNP3|A1KNP3_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 346 1e-93 tr|A5WSF6|A5WSF6_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 346 1e-93 tr|A4KLD8|A4KLD8_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 346 1e-93 tr|A2VP40|A2VP40_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 346 1e-93 tr|Q73UL1|Q73UL1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 306 1e-81 tr|A0QKA9|A0QKA9_MYCA1 Tax_Id=243243 SubName: Full=S30AE family ... 301 3e-80 tr|A4TF99|A4TF99_MYCGI Tax_Id=350054 SubName: Full=Sigma 54 modu... 291 5e-77 tr|A0QTK6|A0QTK6_MYCS2 Tax_Id=246196 SubName: Full=S30AE family ... 288 2e-76 tr|Q1BCC0|Q1BCC0_MYCSS Tax_Id=164756 SubName: Full=Sigma 54 modu... 284 5e-75 tr|A3PWB1|A3PWB1_MYCSJ Tax_Id=164757 SubName: Full=Sigma 54 modu... 284 5e-75 tr|A1UCM4|A1UCM4_MYCSK Tax_Id=189918 SubName: Full=Sigma 54 modu... 284 5e-75 tr|A1T5Y3|A1T5Y3_MYCVP Tax_Id=350058 SubName: Full=Sigma 54 modu... 281 5e-74 tr|Q5YQT3|Q5YQT3_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 267 6e-70 tr|Q0S2Y1|Q0S2Y1_RHOSR Tax_Id=101510 SubName: Full=Putative unch... 264 6e-69 tr|C0ZWZ5|C0ZWZ5_RHOE4 Tax_Id=234621 SubName: Full=Putative unch... 259 2e-67 tr|C3JG54|C3JG54_RHOER Tax_Id=596309 SubName: Full=S30AE family ... 259 2e-67 tr|C1B1E1|C1B1E1_RHOOB Tax_Id=632772 SubName: Full=Putative unch... 258 4e-67 tr|D0LFC2|D0LFC2_9ACTO Tax_Id=526226 SubName: Full=Ribosomal sub... 251 3e-65 tr|C2ARJ8|C2ARJ8_TSUPA Tax_Id=521096 SubName: Full=Sigma 54 modu... 226 1e-57 tr|C6WJ34|C6WJ34_ACTMD Tax_Id=446462 SubName: Full=Sigma 54 modu... 225 3e-57 tr|C4RRA8|C4RRA8_9ACTO Tax_Id=219305 SubName: Full=30S ribosomal... 217 7e-55 tr|A8M3Q2|A8M3Q2_SALAI Tax_Id=391037 SubName: Full=Sigma 54 modu... 216 2e-54 tr|C7MXY7|C7MXY7_SACVD Tax_Id=471857 SubName: Full=SSU ribosomal... 211 4e-53 tr|A4X3J7|A4X3J7_SALTO Tax_Id=369723 SubName: Full=Sigma 54 modu... 209 1e-52 tr|C4DNI7|C4DNI7_9ACTO Tax_Id=446470 SubName: Full=SSU ribosomal... 205 3e-51 tr|A4FNI8|A4FNI8_SACEN Tax_Id=405948 SubName: Full=S30AE family ... 202 3e-50 tr|C0U8U2|C0U8U2_9ACTO Tax_Id=526225 SubName: Full=SSU ribosomal... 198 3e-49 tr|C8XEB0|C8XEB0_NAKMY Tax_Id=479431 SubName: Full=Sigma 54 modu... 196 2e-48 tr|A3RDV7|A3RDV7_RHOOP Tax_Id=37919 (yvy)SubName: Full=Yvy; Flag... 196 2e-48 tr|B1MF52|B1MF52_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 195 4e-48 tr|C0XV67|C0XV67_9CORY Tax_Id=525263 SubName: Full=Possible ribo... 191 5e-47 tr|Q8FRI8|Q8FRI8_COREF Tax_Id=152794 SubName: Full=Putative unch... 191 7e-47 tr|C8NLT0|C8NLT0_COREF Tax_Id=196164 SubName: Full=S30AE family ... 191 7e-47 tr|C8NWC8|C8NWC8_9CORY Tax_Id=585529 SubName: Full=S30AE family ... 189 2e-46 tr|C4LK75|C4LK75_CORK4 Tax_Id=645127 SubName: Full=Putative unch... 189 3e-46 tr|C6R6L4|C6R6L4_9CORY Tax_Id=553206 SubName: Full=S30AE family ... 188 3e-46 tr|C2BJI0|C2BJI0_9CORY Tax_Id=525264 SubName: Full=Ribosome-asso... 188 3e-46 tr|C2CQV7|C2CQV7_CORST Tax_Id=525268 SubName: Full=Ribosome-asso... 188 4e-46 tr|Q6NIR9|Q6NIR9_CORDI Tax_Id=1717 SubName: Full=Putative unchar... 187 6e-46 tr|C3PEM1|C3PEM1_CORA7 Tax_Id=548476 SubName: Full=Ribosome-asso... 186 1e-45 >tr|Q9CCI7|Q9CCI7_MYCLE Tax_Id=1769 SubName: Full=Putative uncharacterized protein ML0778;[Mycobacterium leprae] Length = 229 Score = 427 bits (1099), Expect = e-118 Identities = 213/229 (93%), Positives = 213/229 (93%) Query: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR Sbjct: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 Query: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR Sbjct: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 Query: 121 RGKDRRKVHYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH 180 RGKDRRKVHYGDK KAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH Sbjct: 121 RGKDRRKVHYGDKTPVSVAEATAVAVSPEKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH 180 Query: 181 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA Sbjct: 181 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 >tr|B8ZQF6|B8ZQF6_MYCLB Tax_Id=561304 SubName: Full=Putative uncharacterized protein;[Mycobacterium leprae] Length = 229 Score = 427 bits (1099), Expect = e-118 Identities = 213/229 (93%), Positives = 213/229 (93%) Query: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR Sbjct: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 Query: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR Sbjct: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 Query: 121 RGKDRRKVHYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH 180 RGKDRRKVHYGDK KAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH Sbjct: 121 RGKDRRKVHYGDKTPVSVAEATAVAVSPEKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH 180 Query: 181 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA Sbjct: 181 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 >tr|Q7D5V2|Q7D5V2_MYCTU Tax_Id=1773 SubName: Full=S30AE family protein;[Mycobacterium tuberculosis] Length = 219 Score = 352 bits (904), Expect = 1e-95 Identities = 181/229 (79%), Positives = 186/229 (81%), Gaps = 10/229 (4%) Query: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 MSRL V GQVL EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDR Sbjct: 1 MSRLAVDSGQVL----------AEPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDR 50 Query: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 TIYLFDVELDHERNRRQRK CQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR Sbjct: 51 TIYLFDVELDHERNRRQRKSCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 110 Query: 121 RGKDRRKVHYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH 180 RGKDRRKVHYGDK FNT PA AHDH GAV + EPGRIVRTKEH Sbjct: 111 RGKDRRKVHYGDKTPVSLAEATAVVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEH 170 Query: 181 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 PAKPMSVDDALY+MELVGHDFFLF DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 171 PAKPMSVDDALYQMELVGHDFFLFYDKDTERPSVVYRRHAYDYGLIRLA 219 >tr|B2HEQ5|B2HEQ5_MYCMM Tax_Id=216594 SubName: Full=Conserved protein;[Mycobacterium marinum] Length = 229 Score = 347 bits (890), Expect = 6e-94 Identities = 172/229 (75%), Positives = 188/229 (82%) Query: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 M+RLTV QVL+ AP S + EP EIVFKGRNVEIPDHFR +VSQ+L+RLERFDR Sbjct: 1 MTRLTVDSDQVLDQAPAQSGQPEEPQATAEIVFKGRNVEIPDHFRTYVSQKLSRLERFDR 60 Query: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 TIYLFDVELDHERNRRQRK CQRVEITARGRGPVVRGEACADSFYAALESAVVK+ESRLR Sbjct: 61 TIYLFDVELDHERNRRQRKSCQRVEITARGRGPVVRGEACADSFYAALESAVVKVESRLR 120 Query: 121 RGKDRRKVHYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH 180 R KDRRKVHYGDK AF EPA H+H GAV D++PGR+VRTKEH Sbjct: 121 RTKDRRKVHYGDKTPVSVAEATATVTAPEMAFAAEPAEPHEHDGAVLDHQPGRVVRTKEH 180 Query: 181 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 PAKPMSVDDALYEMELVGHDFFLF D+++ERP+VVYRRH YDYGLIRL+ Sbjct: 181 PAKPMSVDDALYEMELVGHDFFLFFDQETERPTVVYRRHGYDYGLIRLS 229 >tr|A0PRE6|A0PRE6_MYCUA Tax_Id=362242 SubName: Full=Conserved protein;[Mycobacterium ulcerans] Length = 229 Score = 347 bits (890), Expect = 6e-94 Identities = 172/229 (75%), Positives = 188/229 (82%) Query: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 M+RLTV QVL+ AP S + EP EIVFKGRNVEIPDHFR +VSQ+L+RLERFDR Sbjct: 1 MTRLTVDSDQVLDQAPAQSGQPEEPQATAEIVFKGRNVEIPDHFRTYVSQKLSRLERFDR 60 Query: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 TIYLFDVELDHERNRRQRK CQRVEITARGRGPVVRGEACADSFYAALESAVVK+ESRLR Sbjct: 61 TIYLFDVELDHERNRRQRKSCQRVEITARGRGPVVRGEACADSFYAALESAVVKVESRLR 120 Query: 121 RGKDRRKVHYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEH 180 R KDRRKVHYGDK AF EPA H+H GAV D++PGR+VRTKEH Sbjct: 121 RTKDRRKVHYGDKTPVSVAEATATVTAPEMAFAAEPAEPHEHDGAVLDHQPGRVVRTKEH 180 Query: 181 PAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 PAKPMSVDDALYEMELVGHDFFLF D+++ERP+VVYRRH YDYGLIRL+ Sbjct: 181 PAKPMSVDDALYEMELVGHDFFLFFDQETERPTVVYRRHGYDYGLIRLS 229 >tr|Q7TWX2|Q7TWX2_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb3269c;[Mycobacterium bovis] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|O05886|O05886_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|C6DXI7|C6DXI7_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|C1AH15|C1AH15_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|A5U7R5|A5U7R5_MYCTA Tax_Id=419947 SubName: Full=S30AE family protein;[Mycobacterium tuberculosis] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|A1KNP3|A1KNP3_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_3270c;[Mycobacterium bovis] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|A5WSF6|A5WSF6_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|A4KLD8|A4KLD8_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|A2VP40|A2VP40_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 214 Score = 346 bits (887), Expect = 1e-93 Identities = 172/206 (83%), Positives = 177/206 (85%) Query: 24 EPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQR 83 EP N EIVFKGRNVEIPDHFRI+VSQ+LARLERFDRTIYLFDVELDHERNRRQRK CQR Sbjct: 9 EPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQR 68 Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK Sbjct: 69 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATA 128 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 FNT PA AHDH GAV + EPGRIVRTKEHPAKPMSVDDALY+MELVGHDFFL Sbjct: 129 VVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFL 188 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F DK +ERPSVVYRRHAYDYGLIRLA Sbjct: 189 FYDKDTERPSVVYRRHAYDYGLIRLA 214 >tr|Q73UL1|Q73UL1_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 231 Score = 306 bits (784), Expect = 1e-81 Identities = 161/233 (69%), Positives = 177/233 (75%), Gaps = 6/233 (2%) Query: 1 MSRLTVGFGQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDR 60 MSRL+V GQ+L+ + +D Q +P E+VFKGRNVEIPDH+R++VSQ+LARLERFDR Sbjct: 1 MSRLSVDSGQILDQSSPSTDGQGQPTATAEVVFKGRNVEIPDHYRLYVSQKLARLERFDR 60 Query: 61 TIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLR 120 +IYLFDVEL H NRRQRK CQRVEITARGRGPV R EACADSFYAA ESAV KLE+RLR Sbjct: 61 SIYLFDVELKHAPNRRQRKSCQRVEITARGRGPVSRAEACADSFYAAFESAVDKLENRLR 120 Query: 121 RGKDRRKVHYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGG----AVTDYEPGRIVR 176 R KDRRKVHYGDK +EP PA DH G D EPGRIVR Sbjct: 121 RVKDRRKVHYGDK--TPVSLAAATAVPPHAPLPSEPQPAADHDGVEPDTELDREPGRIVR 178 Query: 177 TKEHPAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 TKEHPA PM+VDDALYEMELVG DFFLF DKQ+ERP VVYRRHAYDYGLIRLA Sbjct: 179 TKEHPAIPMTVDDALYEMELVGRDFFLFQDKQTERPCVVYRRHAYDYGLIRLA 231 >tr|A0QKA9|A0QKA9_MYCA1 Tax_Id=243243 SubName: Full=S30AE family protein;[Mycobacterium avium] Length = 226 Score = 301 bits (772), Expect = 3e-80 Identities = 157/225 (69%), Positives = 172/225 (76%), Gaps = 6/225 (2%) Query: 9 GQVLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVE 68 GQ+L+ + +D Q +P E+VFKGRNVEIPDH+R++VSQ+LARLERFDR+IYLFDVE Sbjct: 4 GQILDQSSPSTDGQGQPTATAEVVFKGRNVEIPDHYRLYVSQKLARLERFDRSIYLFDVE 63 Query: 69 LDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKV 128 L H NRRQRK CQRVEITARGRGPV R EACADSFYAA ESAV KLE+RLRR KDRRKV Sbjct: 64 LKHAPNRRQRKSCQRVEITARGRGPVSRAEACADSFYAAFESAVDKLENRLRRVKDRRKV 123 Query: 129 HYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGG----AVTDYEPGRIVRTKEHPAKP 184 HYGDK +EP PA DH G D EPGRIVRTKEHPA P Sbjct: 124 HYGDK--TPVSLAAATAVPPRAPLPSEPQPAADHDGVEPDTELDREPGRIVRTKEHPAIP 181 Query: 185 MSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 M+VDDALYEMELVGHDFFLF DKQ+ERP VVYRRHAYDYGLIRLA Sbjct: 182 MTVDDALYEMELVGHDFFLFQDKQTERPCVVYRRHAYDYGLIRLA 226 >tr|A4TF99|A4TF99_MYCGI Tax_Id=350054 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Mycobacterium gilvum] Length = 236 Score = 291 bits (744), Expect = 5e-77 Identities = 144/210 (68%), Positives = 164/210 (78%), Gaps = 2/210 (0%) Query: 20 DEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRK 79 D Q +P+ E+V KGRNVE+PDHFR++V+++LARLERFDRTIYLFDVELDHE+NRRQRK Sbjct: 29 DAQSSDLPSAEVVVKGRNVEVPDHFRLYVAEKLARLERFDRTIYLFDVELDHEKNRRQRK 88 Query: 80 FCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXX 139 CQ VEITARGRGPVVRGEACADSFY A E+A KLE+RLR+ KDRRK+HYGDK Sbjct: 89 NCQHVEITARGRGPVVRGEACADSFYGAFEAAASKLEARLRKSKDRRKIHYGDK--TPVS 146 Query: 140 XXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGH 199 A +P V D+EPGRIVRTKEHPA PM+VDDALYEMELVGH Sbjct: 147 LHEATALDRLDAAFAKPTETSAVEAPVDDHEPGRIVRTKEHPATPMTVDDALYEMELVGH 206 Query: 200 DFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 DFFLF DK+S+RP VVYRRHAYDYGLI+LA Sbjct: 207 DFFLFHDKESDRPCVVYRRHAYDYGLIKLA 236 >tr|A0QTK6|A0QTK6_MYCS2 Tax_Id=246196 SubName: Full=S30AE family protein;[Mycobacterium smegmatis] Length = 230 Score = 288 bits (738), Expect = 2e-76 Identities = 143/203 (70%), Positives = 162/203 (79%), Gaps = 1/203 (0%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 P+ E+V KGRNVE+PDHFR +VS++L+RLERFD+TIYLFDVELDHERNRRQRK CQ VEI Sbjct: 29 PHAEVVVKGRNVEVPDHFRTYVSEKLSRLERFDKTIYLFDVELDHERNRRQRKNCQHVEI 88 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARGRGPVVRGEACADSFY A ESAV KLE RLRR KDRRK+HYGDK Sbjct: 89 TARGRGPVVRGEACADSFYTAFESAVQKLEGRLRRAKDRRKIHYGDKTPVSLAEATAKDP 148 Query: 147 XXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLFLD 206 + E A + G V ++EPGRIVR K+HPA PM+VDDALYEMELVGHDFFLF D Sbjct: 149 LAGLDVSREDGEARYNDG-VAEHEPGRIVRIKDHPATPMTVDDALYEMELVGHDFFLFHD 207 Query: 207 KQSERPSVVYRRHAYDYGLIRLA 229 K+++RPSVVYRRHA+DYGLIRLA Sbjct: 208 KETDRPSVVYRRHAFDYGLIRLA 230 >tr|Q1BCC0|Q1BCC0_MYCSS Tax_Id=164756 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Mycobacterium sp.] Length = 226 Score = 284 bits (727), Expect = 5e-75 Identities = 143/207 (69%), Positives = 163/207 (78%), Gaps = 7/207 (3%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 PN E+V KGRNVEIPDHFR +V+++L RLERFDRTIYLFDVELDHE+NRRQRK CQ VEI Sbjct: 23 PNAEVVVKGRNVEIPDHFRTYVAEKLTRLERFDRTIYLFDVELDHEKNRRQRKNCQHVEI 82 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARGRGPVVRGEACADSFYAA E+AV KLE+RLRR KDRRK+HYGDK Sbjct: 83 TARGRGPVVRGEACADSFYAAFEAAVSKLENRLRRSKDRRKIHYGDKRPVSVAEATAATA 142 Query: 147 XXXKAFNTEPAPAHD----HGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFF 202 + PAPA D G + D+EPGRIVR K+HPA PM+VDDAL +MELVGHDFF Sbjct: 143 AIEQ---ETPAPAEDTGLPDGLTLDDHEPGRIVRVKDHPATPMTVDDALSQMELVGHDFF 199 Query: 203 LFLDKQSERPSVVYRRHAYDYGLIRLA 229 LF DK++++ +VVYRRHAYDYGLIRLA Sbjct: 200 LFHDKETDKATVVYRRHAYDYGLIRLA 226 >tr|A3PWB1|A3PWB1_MYCSJ Tax_Id=164757 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Mycobacterium sp.] Length = 226 Score = 284 bits (727), Expect = 5e-75 Identities = 143/207 (69%), Positives = 163/207 (78%), Gaps = 7/207 (3%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 PN E+V KGRNVEIPDHFR +V+++L RLERFDRTIYLFDVELDHE+NRRQRK CQ VEI Sbjct: 23 PNAEVVVKGRNVEIPDHFRTYVAEKLTRLERFDRTIYLFDVELDHEKNRRQRKNCQHVEI 82 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARGRGPVVRGEACADSFYAA E+AV KLE+RLRR KDRRK+HYGDK Sbjct: 83 TARGRGPVVRGEACADSFYAAFEAAVSKLENRLRRSKDRRKIHYGDKRPVSVAEATAATA 142 Query: 147 XXXKAFNTEPAPAHD----HGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFF 202 + PAPA D G + D+EPGRIVR K+HPA PM+VDDAL +MELVGHDFF Sbjct: 143 AIEQ---ETPAPAEDTGLPDGLTLDDHEPGRIVRVKDHPATPMTVDDALSQMELVGHDFF 199 Query: 203 LFLDKQSERPSVVYRRHAYDYGLIRLA 229 LF DK++++ +VVYRRHAYDYGLIRLA Sbjct: 200 LFHDKETDKATVVYRRHAYDYGLIRLA 226 >tr|A1UCM4|A1UCM4_MYCSK Tax_Id=189918 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Mycobacterium sp.] Length = 226 Score = 284 bits (727), Expect = 5e-75 Identities = 143/207 (69%), Positives = 163/207 (78%), Gaps = 7/207 (3%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 PN E+V KGRNVEIPDHFR +V+++L RLERFDRTIYLFDVELDHE+NRRQRK CQ VEI Sbjct: 23 PNAEVVVKGRNVEIPDHFRTYVAEKLTRLERFDRTIYLFDVELDHEKNRRQRKNCQHVEI 82 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARGRGPVVRGEACADSFYAA E+AV KLE+RLRR KDRRK+HYGDK Sbjct: 83 TARGRGPVVRGEACADSFYAAFEAAVSKLENRLRRSKDRRKIHYGDKRPVSVAEATAATA 142 Query: 147 XXXKAFNTEPAPAHD----HGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFF 202 + PAPA D G + D+EPGRIVR K+HPA PM+VDDAL +MELVGHDFF Sbjct: 143 AIEQ---ETPAPAEDTGLPDGLTLDDHEPGRIVRVKDHPATPMTVDDALSQMELVGHDFF 199 Query: 203 LFLDKQSERPSVVYRRHAYDYGLIRLA 229 LF DK++++ +VVYRRHAYDYGLIRLA Sbjct: 200 LFHDKETDKATVVYRRHAYDYGLIRLA 226 >tr|A1T5Y3|A1T5Y3_MYCVP Tax_Id=350058 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Mycobacterium vanbaalenii] Length = 250 Score = 281 bits (718), Expect = 5e-74 Identities = 142/222 (63%), Positives = 166/222 (74%), Gaps = 7/222 (3%) Query: 13 NSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHE 72 +S + ++ EP P E+ GRNVE+PDHFR +V+++L+RLERFDRT+YLFDVEL HE Sbjct: 31 DSTMLMDEQSSEPTPKAEVAVTGRNVEVPDHFRSYVAEKLSRLERFDRTLYLFDVELYHE 90 Query: 73 RNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGD 132 +NRRQRK CQ VEITA+GRGPVVRGEACADSFYAALESAV KLE RLR+ KDRRK+HYGD Sbjct: 91 KNRRQRKNCQHVEITAKGRGPVVRGEACADSFYAALESAVSKLEGRLRKSKDRRKIHYGD 150 Query: 133 KXXXXXXXXXXXXXXXXKAFNTEPAPAH-----DHGGAVTDYEPGRIVRTKEHPAKPMSV 187 K + T PA A + ++EPGRIVR KEHPA PM+V Sbjct: 151 K--TPRSLREACSPEQLEGVFTPPAEASLSLDGQSAQPLDEHEPGRIVRVKEHPATPMTV 208 Query: 188 DDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 DDALYEMELVGHDFFLF DK+S+RP VVYRRHAYDYGLI+LA Sbjct: 209 DDALYEMELVGHDFFLFHDKESDRPCVVYRRHAYDYGLIKLA 250 >tr|Q5YQT3|Q5YQT3_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 234 Score = 267 bits (683), Expect = 6e-70 Identities = 139/221 (62%), Positives = 160/221 (72%), Gaps = 8/221 (3%) Query: 17 VPSDEQVEPMPN-VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNR 75 VP + P E+V KGRNVE+PDHFRIHV+ +L+RLERFD TI++FDVEL HERNR Sbjct: 14 VPEEAAERPRATRAEVVVKGRNVEVPDHFRIHVADKLSRLERFDPTIFIFDVELFHERNR 73 Query: 76 RQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXX 135 RQRK CQRVEITARG+GPVVR EACAD+FYAALES K+ESRLRR KDRR+VHYG+K Sbjct: 74 RQRKACQRVEITARGKGPVVRAEACADNFYAALESVTAKVESRLRRTKDRRRVHYGEKTP 133 Query: 136 XXXXXXXXXXXXXXKAFNTEPAPAHDHG------GAVTDYE-PGRIVRTKEHPAKPMSVD 188 PAH H A +Y+ PG IVRTK H A PM+VD Sbjct: 134 VSVAEATADLVDETLFARNGSEPAHRHDEEREFEPAEPEYQGPGHIVRTKVHSATPMTVD 193 Query: 189 DALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 DALY+MELVGHDFFLF DK+++RPSVVYRRHA+DYGLIRLA Sbjct: 194 DALYQMELVGHDFFLFHDKETDRPSVVYRRHAFDYGLIRLA 234 >tr|Q0S2Y1|Q0S2Y1_RHOSR Tax_Id=101510 SubName: Full=Putative uncharacterized protein;[Rhodococcus sp.] Length = 225 Score = 264 bits (674), Expect = 6e-69 Identities = 134/203 (66%), Positives = 155/203 (76%), Gaps = 2/203 (0%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 PN EIV KGRNVE+PDHFR++VS++L+RLERFD +I+LFDVEL HE NRRQRK CQRVEI Sbjct: 25 PNAEIVVKGRNVEVPDHFRVYVSEKLSRLERFDPSIFLFDVELHHEPNRRQRKNCQRVEI 84 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARG+GPV R EACADSFYAA ES KLESRLRR KDR+KVHYG+K Sbjct: 85 TARGKGPVARAEACADSFYAAFESVTAKLESRLRRTKDRKKVHYGEK-TPVSVAEATAAL 143 Query: 147 XXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLFLD 206 + P + D G ++ PG +VRTKEH A PM+VDDALYEMELVGHDFFLF D Sbjct: 144 AEDDSLGISPDISLD-GQMPDEHTPGHVVRTKEHKATPMTVDDALYEMELVGHDFFLFHD 202 Query: 207 KQSERPSVVYRRHAYDYGLIRLA 229 K+S+R +VVYRRHA+DYGLIRLA Sbjct: 203 KESDRATVVYRRHAFDYGLIRLA 225 >tr|C0ZWZ5|C0ZWZ5_RHOE4 Tax_Id=234621 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis] Length = 226 Score = 259 bits (662), Expect = 2e-67 Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 3/203 (1%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 P ++V KGRNVEIPDHFRI+VS++LARLE FD +I+ FDVEL HERNRRQ K CQRVEI Sbjct: 25 PRSDVVVKGRNVEIPDHFRIYVSEKLARLEHFDPSIFHFDVELQHERNRRQAKSCQRVEI 84 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARG+GPV R EA ADSFYAA ES + KLESRLRR KDR+KVHYGDK Sbjct: 85 TARGKGPVARAEASADSFYAAFESVIDKLESRLRRTKDRKKVHYGDKRPVSVAEATASLV 144 Query: 147 XXXKAFNTEPAPAHDHGGAVTDYE-PGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLFL 205 T +G +Y+ PGR+VRTK+HPA+PM++DDALYEMELVGHDFFLF Sbjct: 145 DADSLGVTPDISL--NGQEPDEYDGPGRVVRTKDHPAEPMTIDDALYEMELVGHDFFLFH 202 Query: 206 DKQSERPSVVYRRHAYDYGLIRL 228 DK+S++PSVVYRRHA+DYGLIRL Sbjct: 203 DKESDKPSVVYRRHAFDYGLIRL 225 >tr|C3JG54|C3JG54_RHOER Tax_Id=596309 SubName: Full=S30AE family protein;[Rhodococcus erythropolis SK121] Length = 226 Score = 259 bits (662), Expect = 2e-67 Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 3/203 (1%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 P ++V KGRNVEIPDHFRI+VS++LARLE FD +I+ FDVEL HERNRRQ K CQRVEI Sbjct: 25 PRSDVVVKGRNVEIPDHFRIYVSEKLARLEHFDPSIFHFDVELQHERNRRQAKSCQRVEI 84 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARG+GPV R EA ADSFYAA ES + KLESRLRR KDR+KVHYGDK Sbjct: 85 TARGKGPVARAEASADSFYAAFESVIDKLESRLRRTKDRKKVHYGDKRPVSVAEATASLV 144 Query: 147 XXXKAFNTEPAPAHDHGGAVTDYE-PGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLFL 205 T +G +Y+ PGR+VRTK+HPA+PM++DDALYEMELVGHDFFLF Sbjct: 145 DADSLGVTPDISL--NGQEPDEYDGPGRVVRTKDHPAEPMTIDDALYEMELVGHDFFLFH 202 Query: 206 DKQSERPSVVYRRHAYDYGLIRL 228 DK+S++PSVVYRRHA+DYGLIRL Sbjct: 203 DKESDKPSVVYRRHAFDYGLIRL 225 >tr|C1B1E1|C1B1E1_RHOOB Tax_Id=632772 SubName: Full=Putative uncharacterized protein;[Rhodococcus opacus] Length = 225 Score = 258 bits (659), Expect = 4e-67 Identities = 131/203 (64%), Positives = 154/203 (75%), Gaps = 2/203 (0%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 P EIV KGRNVE+PDHFR++VS++L+RLERFD +I+LFDVEL HE NRRQRK CQRVEI Sbjct: 25 PTAEIVVKGRNVEVPDHFRVYVSEKLSRLERFDPSIFLFDVELQHEPNRRQRKNCQRVEI 84 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 TARG+GPV R EA ADSFYAA ES KLESRLRR KDR+KVHYG+K Sbjct: 85 TARGKGPVARAEASADSFYAAFESVTAKLESRLRRTKDRKKVHYGEK-TPVSVAEATAAL 143 Query: 147 XXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLFLD 206 ++ P + D G ++ PG +VRTKEH A PM+VDDALYEMELVGHDFFLF D Sbjct: 144 AEDESLGISPDISLD-GQVSEEHTPGHVVRTKEHTATPMTVDDALYEMELVGHDFFLFHD 202 Query: 207 KQSERPSVVYRRHAYDYGLIRLA 229 K+S++ +VVYRRHA+DYGLIRLA Sbjct: 203 KESDKATVVYRRHAFDYGLIRLA 225 >tr|D0LFC2|D0LFC2_9ACTO Tax_Id=526226 SubName: Full=Ribosomal subunit interface protein;[Gordonia bronchialis DSM 43247] Length = 270 Score = 251 bits (642), Expect = 3e-65 Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 15/222 (6%) Query: 19 SDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQR 78 SDE EP V VF GRNVEIPDH+RI+V +LARLERFD +I+ FDVEL+HERNRRQ Sbjct: 53 SDEPAEPSSTV--VFSGRNVEIPDHYRIYVGDKLARLERFDPSIFRFDVELNHERNRRQS 110 Query: 79 KFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXX 138 K CQRVEITA G+GP+VR +AC ++FYAALE ++ KLESRLRR KDRR+VH+G++ Sbjct: 111 KICQRVEITATGKGPIVRAQACGENFYAALEGSLDKLESRLRRVKDRRRVHHGNRRPISV 170 Query: 139 XXXXXXXXXXXK-----------AFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSV 187 + A D G V +Y+PG++VR KEH A PM+V Sbjct: 171 AEATEIGAPPLRDNQLTVDGLVGADGATDEKTWDDG--VQEYQPGQVVRVKEHTAVPMTV 228 Query: 188 DDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 DDALYEMELVGHDFFLF DK+S++PSVVYRRHA+DYGLIRLA Sbjct: 229 DDALYEMELVGHDFFLFHDKESDKPSVVYRRHAFDYGLIRLA 270 >tr|C2ARJ8|C2ARJ8_TSUPA Tax_Id=521096 SubName: Full=Sigma 54 modulation protein; SSU ribosomal protein S30P;[Tsukamurella paurometabola DSM 20162] Length = 238 Score = 226 bits (576), Expect = 1e-57 Identities = 106/202 (52%), Positives = 143/202 (70%), Gaps = 3/202 (1%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 PN + GRNV++P+HFR+++ +LARLE+F TI LF+V L HE N RQ K CQR+E+ Sbjct: 39 PNAPLAIDGRNVDVPEHFRVYIGDKLARLEKFRSTITLFEVSLFHEPNPRQSKICQRLEL 98 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 T RG+G V R EA AD+FYAA E+A+ K++SR+R+ DR+KVHYG++ Sbjct: 99 TVRGKGGVARAEAAADNFYAAFETALTKVQSRIRKASDRKKVHYGNRTPVSVSEATAPSA 158 Query: 147 XXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLFLD 206 + T+ P + V D+ PG++VR K+HP PM+VDDALY+MELVGHDFFLF D Sbjct: 159 LPDASSETDDDP---YAALVEDHLPGQVVRIKDHPGTPMTVDDALYQMELVGHDFFLFFD 215 Query: 207 KQSERPSVVYRRHAYDYGLIRL 228 K++E+PSVVYRR A+DYGL+RL Sbjct: 216 KETEKPSVVYRRKAFDYGLLRL 237 >tr|C6WJ34|C6WJ34_ACTMD Tax_Id=446462 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Actinosynnema mirum] Length = 222 Score = 225 bits (574), Expect = 3e-57 Identities = 120/222 (54%), Positives = 145/222 (65%), Gaps = 21/222 (9%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEITA 88 ++IV KGRNVE+P+H+R+HV+++LARLER+DR + FDVEL HE NRRQ K CQRVEIT Sbjct: 1 MDIVVKGRNVEVPEHYRVHVAEKLARLERYDRKVIRFDVELFHEPNRRQSKNCQRVEITG 60 Query: 89 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDK----------XXXXX 138 +GRGPV+R EA A FYAAL++AV KLESRLRR DRR+VHYG + Sbjct: 61 KGRGPVIRAEASAGDFYAALDTAVAKLESRLRRTHDRRRVHYGRRGTTSVAEATGGLADV 120 Query: 139 XXXXXXXXXXXKAFNTEPAPAHDHG-----------GAVTDYEPGRIVRTKEHPAKPMSV 187 + E AP + G + D PG+IVR KEH AKPM+V Sbjct: 121 LVSDGQAAAQGRTALLEAAPQSEDGYDAEVPAQRWDDGLDDNLPGQIVREKEHAAKPMTV 180 Query: 188 DDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 D ALYEMELVGHDF+LF D RPSVVYRR +DYG+IRLA Sbjct: 181 DQALYEMELVGHDFYLFADADCGRPSVVYRRRGFDYGVIRLA 222 >tr|C4RRA8|C4RRA8_9ACTO Tax_Id=219305 SubName: Full=30S ribosomal protein S30EA;[Micromonospora sp. ATCC 39149] Length = 211 Score = 217 bits (553), Expect = 7e-55 Identities = 112/212 (52%), Positives = 141/212 (66%), Gaps = 15/212 (7%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEITA 88 ++IV KGRNVE+PDH+R+HV+++LA++ER+D + DVEL HERN RQ CQRVEIT Sbjct: 1 MDIVVKGRNVEVPDHYRVHVAEKLAKIERYDHKLIRVDVELFHERNPRQSDHCQRVEITC 60 Query: 89 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXXXX 148 RGPV+R EAC D FY+AL++A+ KL++RLRR DRR+VH G Sbjct: 61 VSRGPVIRAEACTDDFYSALDAAIAKLDNRLRRAADRRRVHRG---RHAPISVAAATADL 117 Query: 149 XKAFNTEPAPAHDHGGAVT------------DYEPGRIVRTKEHPAKPMSVDDALYEMEL 196 A P PA D + T D +P I R K HPA+PM+VDDAL++MEL Sbjct: 118 PVAGLDAPVPALDGVRSATATAVAERFEEEPDDQPWHIARAKVHPAEPMTVDDALFQMEL 177 Query: 197 VGHDFFLFLDKQSERPSVVYRRHAYDYGLIRL 228 VGHDF+LF DK+S RPSVVYRRHAYDYG+I L Sbjct: 178 VGHDFYLFHDKESGRPSVVYRRHAYDYGIISL 209 >tr|A8M3Q2|A8M3Q2_SALAI Tax_Id=391037 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Salinispora arenicola] Length = 208 Score = 216 bits (549), Expect = 2e-54 Identities = 108/211 (51%), Positives = 140/211 (66%), Gaps = 14/211 (6%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEITA 88 ++IV KGRNVE+PDH+R+HV+++LA++ER+D + DVEL HERN RQ CQRVEIT Sbjct: 1 MDIVVKGRNVEVPDHYRVHVAEKLAKIERYDHKVIRVDVELFHERNPRQSDHCQRVEITC 60 Query: 89 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXXXX 148 RGPV+R EAC FY+AL++A+ +L++R+RR DRR+VH+G Sbjct: 61 FSRGPVMRAEACTSDFYSALDAAIARLDTRMRRAADRRRVHHG----RHAPISVAAATAR 116 Query: 149 XKAFNTEPAPAHDHGGAVT----------DYEPGRIVRTKEHPAKPMSVDDALYEMELVG 198 + AP G T D +P I R K HPA+PM+VDDAL++MELVG Sbjct: 117 LPVTDLVAAPLSHDGATATVAAERPEEERDDQPWHIAREKVHPAEPMTVDDALFQMELVG 176 Query: 199 HDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 HDF+LF DK+S RPSVVYRRHAYDYG+I LA Sbjct: 177 HDFYLFQDKESGRPSVVYRRHAYDYGIISLA 207 >tr|C7MXY7|C7MXY7_SACVD Tax_Id=471857 SubName: Full=SSU ribosomal protein S30P/sigma 54 modulation protein;[Saccharomonospora viridis] Length = 226 Score = 211 bits (538), Expect = 4e-53 Identities = 113/225 (50%), Positives = 142/225 (63%), Gaps = 25/225 (11%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEITA 88 ++IV KGRNVE+P+H+R HV+ ++ARLER+DR + +DVEL HE N RQ K CQRVEIT Sbjct: 1 MDIVIKGRNVEVPEHYRNHVAGKMARLERYDRKVISYDVELYHEPNPRQAKTCQRVEITG 60 Query: 89 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXXXX 148 +G+GPVVR EA A FY AL+SA+ KLESRLRR DRR+VHYG + Sbjct: 61 KGKGPVVRAEARAGDFYTALDSAIRKLESRLRRMHDRRRVHYGRRSPESLAEATAAAFRA 120 Query: 149 XKAFN-------------TEP------------APAHDHGGAVTDYEPGRIVRTKEHPAK 183 A TEP P V +PGRIVR K+H A+ Sbjct: 121 STAGRGRGRGGTAVLEAPTEPVTSSTDETAELDVPEQRWDDGVVPRQPGRIVREKQHSAE 180 Query: 184 PMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRL 228 PM++DDALY+MELVGHDF+LF D ++ +PSVVYRR +DYG+IRL Sbjct: 181 PMTIDDALYQMELVGHDFYLFNDSETGKPSVVYRRKGFDYGVIRL 225 >tr|A4X3J7|A4X3J7_SALTO Tax_Id=369723 SubName: Full=Sigma 54 modulation protein / SSU ribosomal protein S30P;[Salinispora tropica] Length = 208 Score = 209 bits (533), Expect = 1e-52 Identities = 106/207 (51%), Positives = 137/207 (66%), Gaps = 6/207 (2%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEITA 88 ++IV KGRNVE+PDHFR+HV+++LA++ER+D I DVEL HERN RQ CQRVEIT Sbjct: 1 MDIVVKGRNVEVPDHFRVHVAEKLAKIERYDHKIIRVDVELFHERNPRQADHCQRVEITC 60 Query: 89 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXXXX 148 RGPV+R EA FY+AL++A+ +L++R+RR DRR+VH+G Sbjct: 61 VSRGPVMRAEAGTSDFYSALDAAIARLDARMRRAADRRRVHHGRHAPISVAAATAGLPVT 120 Query: 149 XKAFNTEPAPA------HDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFF 202 A A + D +P I R K HPA+PM++DDAL++MELVGHDF+ Sbjct: 121 DLVAGPLSADAATATAVAERAEEEHDDQPWHIAREKVHPAEPMTIDDALFQMELVGHDFY 180 Query: 203 LFLDKQSERPSVVYRRHAYDYGLIRLA 229 LF DK+S RPSVVYRRHAYDYG+I LA Sbjct: 181 LFQDKESGRPSVVYRRHAYDYGIISLA 207 >tr|C4DNI7|C4DNI7_9ACTO Tax_Id=446470 SubName: Full=SSU ribosomal protein S30P;[Stackebrandtia nassauensis DSM 44728] Length = 206 Score = 205 bits (522), Expect = 3e-51 Identities = 105/204 (51%), Positives = 133/204 (65%), Gaps = 4/204 (1%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLAR-LERFDRTIYLFDVELDHERNRRQRKFCQRVEIT 87 +EIV GRNVE+PDH+R V +L + +++FD + DVEL HE+NRRQ + CQRVEIT Sbjct: 1 MEIVVTGRNVEVPDHYRQLVEDKLRKKVDKFDHKVIRIDVELHHEKNRRQHEQCQRVEIT 60 Query: 88 ARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXXX 147 R RGPV+R EAC F AA E+A KL RLRR DRR+VH+G + Sbjct: 61 CRSRGPVIRAEACNKDFTAAFEAAAAKLGERLRRSADRRRVHHGRRTPVSVGQATAMIAG 120 Query: 148 XXKAFNTEPAPAHD---HGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLF 204 P + D + G V D+ PGRIVR KEH +PM+VDDAL+ MELVGHDF+LF Sbjct: 121 NGNGNKARPVISEDVDPYEGLVEDHLPGRIVREKEHRGEPMTVDDALFHMELVGHDFYLF 180 Query: 205 LDKQSERPSVVYRRHAYDYGLIRL 228 DK++ RPSVVYRR +DYG++RL Sbjct: 181 HDKETGRPSVVYRRKGFDYGILRL 204 >tr|A4FNI8|A4FNI8_SACEN Tax_Id=405948 SubName: Full=S30AE family protein;[Saccharopolyspora erythraea] Length = 231 Score = 202 bits (513), Expect = 3e-50 Identities = 112/226 (49%), Positives = 132/226 (58%), Gaps = 25/226 (11%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEITA 88 ++IV KGRNVE+PDH+R HV ++L RLER+ + DVEL HERN RQ K CQRVEIT Sbjct: 1 MDIVVKGRNVEVPDHYRQHVDEKLTRLERYSKKTIRADVELFHERNPRQAKTCQRVEITL 60 Query: 89 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGD---------------- 132 +G+G VR EA A FYAAL++A KLE RLRR DRRKVHYG Sbjct: 61 KGKGTPVRAEAAAGDFYAALDAATTKLEGRLRRMCDRRKVHYGQHNPTSVAQATAAMADR 120 Query: 133 ---------KXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAK 183 + A T + YEPGRIVR KEH A+ Sbjct: 121 TVVTGTSGGRTALLEAPEEEQEEQEESAEYTTAEVPEQRWSSDNGYEPGRIVREKEHTAE 180 Query: 184 PMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 PM+VD ALY+MELVGHDF+LF D S R SVVYRR +DYG+IRLA Sbjct: 181 PMTVDQALYQMELVGHDFYLFSDADSGRASVVYRRKGFDYGVIRLA 226 >tr|C0U8U2|C0U8U2_9ACTO Tax_Id=526225 SubName: Full=SSU ribosomal protein S30P;[Geodermatophilus obscurus DSM 43160] Length = 228 Score = 198 bits (504), Expect = 3e-49 Identities = 109/206 (52%), Positives = 138/206 (66%), Gaps = 8/206 (3%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLF--DVELDHERNRRQRKFCQRVEI 86 +EIV +GRNVE+P+H+R HV ++ + +RFD + + DVEL HE+N RQ CQRVEI Sbjct: 1 MEIVVRGRNVEVPEHYRQHVEDKVGQSDRFDGKLKILRIDVELFHEKNPRQSGKCQRVEI 60 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXX 146 T RG+GPVVR EA A FYAAL+ A KL+ RLR+ DRR+VH+G + Sbjct: 61 TLRGKGPVVRAEAAAPDFYAALDLAAGKLDHRLRKAADRRRVHHGRRTPASVRVGGGAPD 120 Query: 147 XXX-KAFNTEPAPAHDHGGAVTDYE---PGRIVRTKEHPAKPMSVDDALYEMELVGHDFF 202 ++F+ + A G VTD + PG+IVR K HPA PM VD AL+EMELVGHDFF Sbjct: 121 TDVTESFDRDRELAE--GPHVTDLDEHLPGQIVREKHHPATPMHVDQALHEMELVGHDFF 178 Query: 203 LFLDKQSERPSVVYRRHAYDYGLIRL 228 LFL + +P+VVYRRHAYDYGLIRL Sbjct: 179 LFLCADTGQPTVVYRRHAYDYGLIRL 204 >tr|C8XEB0|C8XEB0_NAKMY Tax_Id=479431 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Nakamurella multipartita] Length = 219 Score = 196 bits (498), Expect = 2e-48 Identities = 108/218 (49%), Positives = 138/218 (63%), Gaps = 18/218 (8%) Query: 29 VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEITA 88 ++IV KGRNVE+P+HFR+HV+++LAR ER+D I DVEL HE NRRQ K CQRV+IT Sbjct: 1 MDIVVKGRNVEVPEHFRVHVAEKLARSERYDPKIIRVDVELSHETNRRQHKTCQRVQITV 60 Query: 89 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXXXXXXX 148 RGP VR EA A++FYAAL++AV K+E+RL R DRR+ + Sbjct: 61 ASRGPAVRAEASAENFYAALDAAVTKVETRLHRLHDRRRDRLHGRTPITAVAASPEEILG 120 Query: 149 XKAF-----------NTEP--APA-----HDHGGAVTDYEPGRIVRTKEHPAKPMSVDDA 190 +AF EP APA D D PG+IVR K+HPA+P++VD+A Sbjct: 121 AEAFAPNGAVGTAVLEDEPTAAPAVDEISDDDRWGAEDGGPGQIVRIKDHPAEPITVDEA 180 Query: 191 LYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRL 228 L +MELVGHDF+LF D ++ SVVYRR +DYGLIRL Sbjct: 181 LLQMELVGHDFYLFNDSETGLSSVVYRRRGFDYGLIRL 218 >tr|A3RDV7|A3RDV7_RHOOP Tax_Id=37919 (yvy)SubName: Full=Yvy; Flags: Fragment;[Rhodococcus opacus] Length = 161 Score = 196 bits (497), Expect = 2e-48 Identities = 102/163 (62%), Positives = 117/163 (71%), Gaps = 2/163 (1%) Query: 57 RFDRTIYLFDVELDHERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLE 116 RFD +I+LFDVEL HE NRRQRK CQRVEITARG+GPV R EACADSFYAA ES KLE Sbjct: 1 RFDPSIFLFDVELHHEPNRRQRKNCQRVEITARGKGPVARAEACADSFYAAFESVTAKLE 60 Query: 117 SRLRRGKDRRKVHYGDKXXXXXXXXXXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVR 176 SRLRR KDR+KVHYG+K + P + D G ++ PG +VR Sbjct: 61 SRLRRTKDRKKVHYGEK-TPVSVAEATAALAEDDSLGISPDISLD-GQMPDEHTPGHVVR 118 Query: 177 TKEHPAKPMSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRH 219 TKEH A PM+VDDALYEMELVGHDFFLF DK+S++ +VVYRRH Sbjct: 119 TKEHKATPMTVDDALYEMELVGHDFFLFHDKESDKATVVYRRH 161 >tr|B1MF52|B1MF52_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 149 Score = 195 bits (495), Expect = 4e-48 Identities = 101/147 (68%), Positives = 111/147 (75%), Gaps = 2/147 (1%) Query: 84 VEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKXXXXXXXXXX 143 +EITARGRGPVVRGEACAD+F++ALE+AV KLESRLRRG+DRRKVHYGDK Sbjct: 1 MEITARGRGPVVRGEACADTFHSALEAAVAKLESRLRRGRDRRKVHYGDKTPVSLAEATA 60 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTD--YEPGRIVRTKEHPAKPMSVDDALYEMELVGHDF 201 AH H GA D + PG+IVRTKEHPAKPM+VDDALYEMELVGHDF Sbjct: 61 VLPADAFTPPVAVNGAHSHNGAEVDDGHGPGQIVRTKEHPAKPMTVDDALYEMELVGHDF 120 Query: 202 FLFLDKQSERPSVVYRRHAYDYGLIRL 228 FLF D+ S RPSVVYRRHAYDYGLIRL Sbjct: 121 FLFHDQSSGRPSVVYRRHAYDYGLIRL 147 >tr|C0XV67|C0XV67_9CORY Tax_Id=525263 SubName: Full=Possible ribosome-associated inhibitor protein Y;[Corynebacterium lipophiloflavum DSM 44291] Length = 227 Score = 191 bits (485), Expect = 5e-47 Identities = 99/206 (48%), Positives = 132/206 (64%), Gaps = 4/206 (1%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 P ++ GRNVE+P+HF+ V+ +LA++E+ D T+ F VEL HE N R+ QR++I Sbjct: 15 PEAQVTITGRNVEVPEHFQERVNAKLAKIEKLDPTLNFFHVELKHEPNPRREAQAQRIQI 74 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKV-HYGDKXXXXXXXXXXXX 145 TA G+G + R EA DSFYAALESA+ KLE LR+ K RR++ G + Sbjct: 75 TATGKGHLARAEAKEDSFYAALESAIGKLERSLRKVKVRREISRSGHRAPKSTGQIAAEL 134 Query: 146 XXXXKAFNTEPAPAHD---HGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFF 202 + T D + + D +PG++VR KEHPA PMSVDDAL EMELVGHDF+ Sbjct: 135 EAQAREARTSAGGQFDVDPYADQIEDVQPGQVVRRKEHPATPMSVDDALSEMELVGHDFY 194 Query: 203 LFLDKQSERPSVVYRRHAYDYGLIRL 228 LF++ ++ RPSVVYRRHA+DYGLI L Sbjct: 195 LFINSETNRPSVVYRRHAFDYGLISL 220 >tr|Q8FRI8|Q8FRI8_COREF Tax_Id=152794 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens] Length = 235 Score = 191 bits (484), Expect = 7e-47 Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 11/224 (4%) Query: 13 NSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHE 72 +S P+D P+ ++ GRNVE+P+HF V ++LA++ER D T+ F VEL HE Sbjct: 9 SSVTTPADTNDTLSPDTQVSITGRNVEVPEHFAERVHKKLAKIERLDPTLTFFHVELQHE 68 Query: 73 RNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGD 132 N R+ R++ITA G+G + R EA DSFYAALE+A+ K+E LR+ K RR + Sbjct: 69 PNPRRADESNRIQITATGKGHIARAEAKEDSFYAALETALAKMERSLRKVKARRSI---S 125 Query: 133 KXXXXXXXXXXXXXXXXKAFNTEPAPAHDHG--------GAVTDYEPGRIVRTKEHPAKP 184 + A + E A D G V D PG+IVRTKEHPA P Sbjct: 126 RSGHRAPLSTGEVGAQLVAESQEARGADDLGKYDVDPYADKVDDVVPGQIVRTKEHPATP 185 Query: 185 MSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRL 228 MSVDDAL EMELVGHDF+LF+++++++PSVVYRRHA+DYGLI L Sbjct: 186 MSVDDALSEMELVGHDFYLFINEETQQPSVVYRRHAFDYGLISL 229 >tr|C8NLT0|C8NLT0_COREF Tax_Id=196164 SubName: Full=S30AE family protein;[Corynebacterium efficiens YS-314] Length = 234 Score = 191 bits (484), Expect = 7e-47 Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 11/224 (4%) Query: 13 NSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHE 72 +S P+D P+ ++ GRNVE+P+HF V ++LA++ER D T+ F VEL HE Sbjct: 8 SSVTTPADTNDTLSPDTQVSITGRNVEVPEHFAERVHKKLAKIERLDPTLTFFHVELQHE 67 Query: 73 RNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGD 132 N R+ R++ITA G+G + R EA DSFYAALE+A+ K+E LR+ K RR + Sbjct: 68 PNPRRADESNRIQITATGKGHIARAEAKEDSFYAALETALAKMERSLRKVKARRSI---S 124 Query: 133 KXXXXXXXXXXXXXXXXKAFNTEPAPAHDHG--------GAVTDYEPGRIVRTKEHPAKP 184 + A + E A D G V D PG+IVRTKEHPA P Sbjct: 125 RSGHRAPLSTGEVGAQLVAESQEARGADDLGKYDVDPYADKVDDVVPGQIVRTKEHPATP 184 Query: 185 MSVDDALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRL 228 MSVDDAL EMELVGHDF+LF+++++++PSVVYRRHA+DYGLI L Sbjct: 185 MSVDDALSEMELVGHDFYLFINEETQQPSVVYRRHAFDYGLISL 228 >tr|C8NWC8|C8NWC8_9CORY Tax_Id=585529 SubName: Full=S30AE family protein;[Corynebacterium genitalium ATCC 33030] Length = 224 Score = 189 bits (481), Expect = 2e-46 Identities = 98/206 (47%), Positives = 134/206 (65%), Gaps = 5/206 (2%) Query: 27 PNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEI 86 PN ++ GRNVE+P+HF+ V+ +LA++E+ D T+ F VEL HE N R+ R++I Sbjct: 14 PNAQVTITGRNVEVPEHFQERVNTKLAKIEKLDPTLNFFHVELKHEPNPRREAQANRIQI 73 Query: 87 TARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKV----HYGDKXXXXXXXXX 142 TA G+G + R EA DSFYAALESA+ K+E LR+ K RR++ H K Sbjct: 74 TATGKGHLARAEAKEDSFYAALESAIGKMERSLRKVKVRREISMGGHRAPKSTYEVTSEL 133 Query: 143 XXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFF 202 + + A + ++ + PG++VRTKEHPA PMSVD+AL EMELVGHDF+ Sbjct: 134 VAEAEQARQ-EQDDRYADKYAESINENLPGQVVRTKEHPATPMSVDEALSEMELVGHDFY 192 Query: 203 LFLDKQSERPSVVYRRHAYDYGLIRL 228 LF++ +++RPSVVYRRHAYDYGLI L Sbjct: 193 LFINDENQRPSVVYRRHAYDYGLITL 218 >tr|C4LK75|C4LK75_CORK4 Tax_Id=645127 SubName: Full=Putative uncharacterized protein;[Corynebacterium kroppenstedtii] Length = 231 Score = 189 bits (479), Expect = 3e-46 Identities = 104/217 (47%), Positives = 136/217 (62%), Gaps = 4/217 (1%) Query: 14 SAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHER 73 + P DE V P V + GRNV+IPDHF V+ +LA++ER D T+ F VEL HE Sbjct: 2 TTPAEKDEAVTPQAQVHLT--GRNVDIPDHFADRVNAKLAKIERLDPTLTSFHVELLHEP 59 Query: 74 NRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKV-HYGD 132 N R+ R++ITA G+G + R EA DSFYAALESA+ ++E LR+ K RR++ G Sbjct: 60 NPRRADRADRIQITASGKGHIARAEAKEDSFYAALESAIGRMERSLRKVKVRRQISRSGH 119 Query: 133 KXXXXXXXXXXXXXXXXK-AFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDAL 191 + K TE +D D+EPG+IVR K HP+ P+SVD+AL Sbjct: 120 RTPISVGEATAQLVQDAKDEQKTEQPGKYDVDPYAADFEPGKIVRRKTHPSTPISVDEAL 179 Query: 192 YEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRL 228 EMELVGHDFFLF++K++ +PSVVYRRHA+DYGLI L Sbjct: 180 SEMELVGHDFFLFVNKENNKPSVVYRRHAFDYGLITL 216 >tr|C6R6L4|C6R6L4_9CORY Tax_Id=553206 SubName: Full=S30AE family protein;[Corynebacterium tuberculostearicum SK141] Length = 214 Score = 188 bits (478), Expect = 3e-46 Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 7/208 (3%) Query: 27 PN-VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVE 85 PN ++ GRNVE+P+HF+ V+ +LA++ER D T+ F VEL HE N R+ +R++ Sbjct: 4 PNKAQVTITGRNVEVPEHFQERVNDKLAKIERLDPTLTFFHVELQHEPNPRRDSEAERLQ 63 Query: 86 ITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKV----HYGDKXXXXXXXX 141 ITA G+G + R EA DSFYAALE+A+ K+E LR+ K RR+ H K Sbjct: 64 ITATGKGHIARAEAKEDSFYAALETALGKMERSLRKVKVRRENVKGGHRAQKGTGEIAAE 123 Query: 142 XXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDF 201 +A E + V D PG+IVRTKEHPA PMSVDDAL EMELVGHDF Sbjct: 124 MVAQAEAERA--KEERYVDPYAETVEDVRPGQIVRTKEHPATPMSVDDALSEMELVGHDF 181 Query: 202 FLFLDKQSERPSVVYRRHAYDYGLIRLA 229 FLF+++++ +PSVVYRRHAYDYG+I L+ Sbjct: 182 FLFVNEENNKPSVVYRRHAYDYGIISLS 209 >tr|C2BJI0|C2BJI0_9CORY Tax_Id=525264 SubName: Full=Ribosome-associated inhibitor protein Y;[Corynebacterium pseudogenitalium ATCC 33035] Length = 214 Score = 188 bits (478), Expect = 3e-46 Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 7/208 (3%) Query: 27 PN-VEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVE 85 PN ++ GRNVE+P+HF+ V+ +LA++ER D T+ F VEL HE N R+ +R++ Sbjct: 4 PNKAQVTITGRNVEVPEHFQERVNDKLAKIERLDPTLTFFHVELQHEPNPRRDSEAERLQ 63 Query: 86 ITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKV----HYGDKXXXXXXXX 141 ITA G+G + R EA DSFYAALE+A+ K+E LR+ K RR+ H K Sbjct: 64 ITATGKGHIARAEAKEDSFYAALETALGKMERSLRKVKVRRENVKGGHRAQKGTGEIAAE 123 Query: 142 XXXXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDF 201 +A E + V D PG+IVRTKEHPA PMSVDDAL EMELVGHDF Sbjct: 124 MVAQAEAERA--KEERYVDPYAETVEDVRPGQIVRTKEHPATPMSVDDALSEMELVGHDF 181 Query: 202 FLFLDKQSERPSVVYRRHAYDYGLIRLA 229 FLF+++++ +PSVVYRRHAYDYG+I L+ Sbjct: 182 FLFVNEENNKPSVVYRRHAYDYGIISLS 209 >tr|C2CQV7|C2CQV7_CORST Tax_Id=525268 SubName: Full=Ribosome-associated inhibitor protein Y;[Corynebacterium striatum ATCC 6940] Length = 215 Score = 188 bits (477), Expect = 4e-46 Identities = 98/206 (47%), Positives = 133/206 (64%), Gaps = 6/206 (2%) Query: 28 NVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEIT 87 N ++ GRNVE+PDHF+ V+++LA++ER D T+ F VEL HE N R+ R++IT Sbjct: 6 NAQVTITGRNVEVPDHFQERVTEKLAKIERLDPTLTFFHVELQHEPNPRREAESDRIQIT 65 Query: 88 ARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRK----VHYGDKXXXXXXXXXX 143 A G+G + R EA DSFYAALE+A+ K+E LR+ K RR+ H K Sbjct: 66 ATGKGHIARAEAKEDSFYAALETALAKMERSLRKVKVRRENVKSGHRAQKGTGELAAEMV 125 Query: 144 XXXXXXKAFNTEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFL 203 +A E + V D PG+IVR+KEHPA PMSVD+AL EMELVGHDF+L Sbjct: 126 AAAENERA--KEERYIDPYAETVEDVRPGQIVRSKEHPATPMSVDEALSEMELVGHDFYL 183 Query: 204 FLDKQSERPSVVYRRHAYDYGLIRLA 229 F+++++ +PSVVYRRHA+DYG+I L+ Sbjct: 184 FINEENNKPSVVYRRHAFDYGIISLS 209 >tr|Q6NIR9|Q6NIR9_CORDI Tax_Id=1717 SubName: Full=Putative uncharacterized protein;[Corynebacterium diphtheriae] Length = 222 Score = 187 bits (476), Expect = 6e-46 Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 4/221 (1%) Query: 11 VLNSAPVPSDEQVEPMPNVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELD 70 ++ + P S+E + P +V++ GRNVE+P+HF V+ +LA++ R D T+ F VEL Sbjct: 1 MIMTTPAGSNETLSP--DVKVTITGRNVEVPEHFAERVNTKLAKISRLDPTLNFFHVELQ 58 Query: 71 HERNRRQRKFCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHY 130 HE N R+ + R++ITA G+G + R EA DSFYAALE+A+ ++E LR+ K RR + Sbjct: 59 HEPNPRRSEQSDRIQITATGKGHIARAEAKEDSFYAALETALARMERSLRKVKARRSISL 118 Query: 131 -GDKXXXXXXXXXXXXXXXXKAFNTEPAPAHD-HGGAVTDYEPGRIVRTKEHPAKPMSVD 188 G + + E HD + V D PG+IVRTKEHP+ PMSVD Sbjct: 119 SGHRAPLGTGEAAAELVKEAEVAREENKYDHDPYADKVEDVIPGQIVRTKEHPSTPMSVD 178 Query: 189 DALYEMELVGHDFFLFLDKQSERPSVVYRRHAYDYGLIRLA 229 DAL EMELVGHDF+LF+++++ +PSVVYRR A+DYGLI LA Sbjct: 179 DALSEMELVGHDFYLFVNEETGQPSVVYRRRAFDYGLISLA 219 >tr|C3PEM1|C3PEM1_CORA7 Tax_Id=548476 SubName: Full=Ribosome-associated protein;[Corynebacterium aurimucosum] Length = 214 Score = 186 bits (473), Expect = 1e-45 Identities = 98/204 (48%), Positives = 133/204 (65%), Gaps = 3/204 (1%) Query: 28 NVEIVFKGRNVEIPDHFRIHVSQRLARLERFDRTIYLFDVELDHERNRRQRKFCQRVEIT 87 N ++ GRNVE+P+HF+ V+++LA++ER D T+ F VEL HE N R+ +R++IT Sbjct: 6 NAQVTITGRNVEVPEHFQERVTEKLAKIERLDPTLTFFHVELQHEPNPRRESEAERLQIT 65 Query: 88 ARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRK-VHYGDKXXXXXXXXXXXXX 146 A G+G + R EA DSFYAALE+A+ K+E LR+ K RR+ V G + Sbjct: 66 ATGKGHIARAEAKEDSFYAALETALGKMERSLRKVKVRRENVKSGHRAQKGTGQIAAELV 125 Query: 147 XXXKAFN--TEPAPAHDHGGAVTDYEPGRIVRTKEHPAKPMSVDDALYEMELVGHDFFLF 204 +A E + V D PG++VR KEHPA PMSVDDAL EMELVGHDF+LF Sbjct: 126 AEAEAAKPAKEERYIDPYAETVEDVRPGQVVRFKEHPATPMSVDDALSEMELVGHDFYLF 185 Query: 205 LDKQSERPSVVYRRHAYDYGLIRL 228 +++++ +PSVVYRRHA+DYGLI L Sbjct: 186 INEENNKPSVVYRRHAFDYGLISL 209 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.322 0.139 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 1,601,161,072 Number of extensions: 60702236 Number of successful extensions: 116267 Number of sequences better than 10.0: 1280 Number of HSP's gapped: 115678 Number of HSP's successfully gapped: 1606 Length of query: 229 Length of database: 3,808,957,724 Length adjustment: 133 Effective length of query: 96 Effective length of database: 2,325,566,962 Effective search space: 223254428352 Effective search space used: 223254428352 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 78 (34.7 bits)