BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML0811c (544 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|Q9CCH3|Q9CCH3_MYCLE Tax_Id=1769 (rhlE)SubName: Full=Putative ... 1040 0.0 tr|B8ZQH2|B8ZQH2_MYCLB Tax_Id=561304 (rhlE)SubName: Full=Putativ... 1040 0.0 tr|B2HEU8|B2HEU8_MYCMM Tax_Id=216594 (rhlE)SubName: Full=ATP-dep... 715 0.0 tr|O05855|O05855_MYCTU Tax_Id=1773 (rhlE)SubName: Full=ATP-depen... 713 0.0 tr|C6DXF4|C6DXF4_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent... 713 0.0 tr|C1AGY2|C1AGY2_MYCBT Tax_Id=561275 (rhlE)SubName: Full=Putativ... 713 0.0 tr|A5U7N3|A5U7N3_MYCTA Tax_Id=419947 (rhlE)SubName: Full=ATP-dep... 713 0.0 tr|A1KNL1|A1KNL1_MYCBP Tax_Id=410289 (rhlE)SubName: Full=Probabl... 713 0.0 tr|A5WSC3|A5WSC3_MYCTF Tax_Id=336982 SubName: Full=ATP-dependent... 713 0.0 tr|A4KLB0|A4KLB0_MYCTU Tax_Id=395095 SubName: Full=ATP-dependent... 713 0.0 tr|A2VP09|A2VP09_MYCTU Tax_Id=348776 SubName: Full=ATP-dependent... 713 0.0 tr|Q7TX01|Q7TX01_MYCBO Tax_Id=1765 (rhlE)SubName: Full=PROBABLE ... 712 0.0 tr|A0PRA7|A0PRA7_MYCUA Tax_Id=362242 (rhlE)SubName: Full=ATP-dep... 710 0.0 tr|Q73UQ4|Q73UQ4_MYCPA Tax_Id=1770 (rhlE)SubName: Full=RhlE;[Myc... 693 0.0 tr|A0QTQ8|A0QTQ8_MYCS2 Tax_Id=246196 SubName: Full=DEAD/DEAH box... 653 0.0 tr|Q1BC79|Q1BC79_MYCSS Tax_Id=164756 SubName: Full=DEAD/DEAH box... 650 0.0 tr|A1UCR5|A1UCR5_MYCSK Tax_Id=189918 SubName: Full=DEAD/DEAH box... 650 0.0 tr|A3PWH1|A3PWH1_MYCSJ Tax_Id=164757 SubName: Full=DEAD/DEAH box... 648 0.0 tr|A4TFD7|A4TFD7_MYCGI Tax_Id=350054 SubName: Full=DEAD/DEAH box... 645 0.0 tr|A1T613|A1T613_MYCVP Tax_Id=350058 SubName: Full=DEAD/DEAH box... 645 0.0 tr|B1MF01|B1MF01_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-... 613 e-173 tr|C1B1G9|C1B1G9_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-... 588 e-166 tr|Q0S2V3|Q0S2V3_RHOSR Tax_Id=101510 SubName: Full=Probable cold... 585 e-165 tr|Q5YQW7|Q5YQW7_NOCFA Tax_Id=37329 SubName: Full=Putative ATP-d... 575 e-162 tr|C2ARN5|C2ARN5_TSUPA Tax_Id=521096 SubName: Full=DNA/RNA helic... 551 e-154 tr|D0LF13|D0LF13_9ACTO Tax_Id=526226 SubName: Full=DEAD/DEAH box... 550 e-154 tr|C0ZX20|C0ZX20_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-... 530 e-148 tr|C6WM51|C6WM51_ACTMD Tax_Id=446462 SubName: Full=DEAD/DEAH box... 524 e-146 tr|C7MVL7|C7MVL7_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helic... 521 e-146 tr|C3JKW4|C3JKW4_RHOER Tax_Id=596309 SubName: Full=Dead/deah box... 514 e-144 tr|C8XJ80|C8XJ80_NAKMY Tax_Id=479431 SubName: Full=DEAD/DEAH box... 511 e-143 tr|A4F8L7|A4F8L7_SACEN Tax_Id=405948 (rhlE)SubName: Full=Putativ... 498 e-138 tr|Q2J6D3|Q2J6D3_FRASC Tax_Id=106370 SubName: Full=DEAD/DEAH box... 481 e-133 tr|C0U8W9|C0U8W9_9ACTO Tax_Id=526225 SubName: Full=DNA/RNA helic... 475 e-132 tr|C1RN84|C1RN84_9CELL Tax_Id=446466 SubName: Full=DNA/RNA helic... 474 e-131 tr|A9WPJ4|A9WPJ4_RENSM Tax_Id=288705 SubName: Full=ATP-dependent... 472 e-131 tr|C0VCH3|C0VCH3_9MICO Tax_Id=446471 SubName: Full=DNA/RNA helic... 471 e-130 tr|A6W765|A6W765_KINRD Tax_Id=266940 SubName: Full=DEAD/DEAH box... 469 e-130 tr|B5GQ57|B5GQ57_STRCL Tax_Id=443255 SubName: Full=Putative unch... 467 e-129 tr|C7NK85|C7NK85_KYTSD Tax_Id=478801 SubName: Full=DNA/RNA helic... 466 e-129 tr|A8L2H9|A8L2H9_FRASN Tax_Id=298653 SubName: Full=DEAD/DEAH box... 465 e-129 tr|A4X1W4|A4X1W4_SALTO Tax_Id=369723 SubName: Full=DEAD/DEAH box... 464 e-128 tr|A7BEI8|A7BEI8_9ACTO Tax_Id=411466 SubName: Full=Putative unch... 464 e-128 tr|A8M058|A8M058_SALAI Tax_Id=391037 SubName: Full=DEAD/DEAH box... 463 e-128 tr|C0XV82|C0XV82_9CORY Tax_Id=525263 SubName: Full=Helicase;[Cor... 463 e-128 tr|B8HBT2|B8HBT2_ARTCA Tax_Id=452863 SubName: Full=DEAD/DEAH box... 462 e-128 tr|A1R8B9|A1R8B9_ARTAT Tax_Id=290340 SubName: Full=Putative ATP-... 462 e-128 tr|C0W125|C0W125_9ACTO Tax_Id=525245 SubName: Full=ATP-dependent... 462 e-128 tr|A0JYP4|A0JYP4_ARTS2 Tax_Id=290399 SubName: Full=DEAD/DEAH box... 462 e-128 tr|C8NWB3|C8NWB3_9CORY Tax_Id=585529 (deaD)SubName: Full=ATP-dep... 461 e-127 >tr|Q9CCH3|Q9CCH3_MYCLE Tax_Id=1769 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Mycobacterium leprae] Length = 544 Score = 1040 bits (2690), Expect = 0.0 Identities = 529/544 (97%), Positives = 530/544 (97%) Query: 1 VNRDSKTPTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQE 60 +NRDSKTPTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQE Sbjct: 1 MNRDSKTPTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQE 60 Query: 61 LTLPLALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCL 120 LTLPLALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCL Sbjct: 61 LTLPLALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCL 120 Query: 121 QVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQ 180 QVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQ Sbjct: 121 QVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQ 180 Query: 181 GHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFM 240 GHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFM Sbjct: 181 GHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFM 240 Query: 241 DQPIHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQK 300 DQPIHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQK Sbjct: 241 DQPIHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQK 300 Query: 301 VTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINY 360 VTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINY Sbjct: 301 VTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINY 360 Query: 361 QCPEDEKMYVHRIXXXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPH 420 QCPEDEKMYVHRI LVDWDELHRWETIDKALGLGTPDPAETYSNSPH Sbjct: 361 QCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELHRWETIDKALGLGTPDPAETYSNSPH 420 Query: 421 LYTELAIPAEASGTVGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQ 480 LYTELAIPAEASGTVGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQ Sbjct: 421 LYTELAIPAEASGTVGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQ 480 Query: 481 PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENGLDKNLA 540 PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENGLDKNLA Sbjct: 481 PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENGLDKNLA 540 Query: 541 VQAN 544 VQAN Sbjct: 541 VQAN 544 >tr|B8ZQH2|B8ZQH2_MYCLB Tax_Id=561304 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Mycobacterium leprae] Length = 544 Score = 1040 bits (2690), Expect = 0.0 Identities = 529/544 (97%), Positives = 530/544 (97%) Query: 1 VNRDSKTPTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQE 60 +NRDSKTPTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQE Sbjct: 1 MNRDSKTPTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQE 60 Query: 61 LTLPLALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCL 120 LTLPLALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCL Sbjct: 61 LTLPLALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCL 120 Query: 121 QVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQ 180 QVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQ Sbjct: 121 QVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQ 180 Query: 181 GHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFM 240 GHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFM Sbjct: 181 GHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFM 240 Query: 241 DQPIHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQK 300 DQPIHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQK Sbjct: 241 DQPIHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQK 300 Query: 301 VTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINY 360 VTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINY Sbjct: 301 VTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINY 360 Query: 361 QCPEDEKMYVHRIXXXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPH 420 QCPEDEKMYVHRI LVDWDELHRWETIDKALGLGTPDPAETYSNSPH Sbjct: 361 QCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELHRWETIDKALGLGTPDPAETYSNSPH 420 Query: 421 LYTELAIPAEASGTVGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQ 480 LYTELAIPAEASGTVGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQ Sbjct: 421 LYTELAIPAEASGTVGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQ 480 Query: 481 PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENGLDKNLA 540 PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENGLDKNLA Sbjct: 481 PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENGLDKNLA 540 Query: 541 VQAN 544 VQAN Sbjct: 541 VQAN 544 >tr|B2HEU8|B2HEU8_MYCMM Tax_Id=216594 (rhlE)SubName: Full=ATP-dependent RNA helicase RhlE;[Mycobacterium marinum] Length = 517 Score = 715 bits (1845), Expect = 0.0 Identities = 375/517 (72%), Positives = 415/517 (80%), Gaps = 15/517 (2%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 + + T T FA+LGVRDEIVRAL ER I+ PFAIQELTLPLALAGDD+IGQARTGMGK Sbjct: 4 LKSTTETTPKTFAELGVRDEIVRALGERDIECPFAIQELTLPLALAGDDLIGQARTGMGK 63 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADD---DN 139 TFAFGVPLLQR+S T RPL+GAPR LVVVPTRELCLQV +DLA AKYLTA D Sbjct: 64 TFAFGVPLLQRVSSGTGVRPLTGAPRALVVVPTRELCLQVTEDLAVAAKYLTATTETGDQ 123 Query: 140 RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEM 199 R SVVSIYGGRAYEPQIEAL+ GADVVV TPGRLLDL QQGHLQL GLSVLVLDEADEM Sbjct: 124 RPLSVVSIYGGRAYEPQIEALRAGADVVVGTPGRLLDLSQQGHLQLGGLSVLVLDEADEM 183 Query: 200 LDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDT 259 LDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM QP HIRAEAPHSLAVHDT Sbjct: 184 LDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMIQPTHIRAEAPHSLAVHDT 243 Query: 260 TQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDL 319 T+QFVYRAHALDKVEL++R+LQAR RGATMIFTRTKRTAQKV +ELNERGFAVGAVHGDL Sbjct: 244 TEQFVYRAHALDKVELVTRVLQARERGATMIFTRTKRTAQKVADELNERGFAVGAVHGDL 303 Query: 320 GQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXX 379 GQ+ARE AL++FR+G+V+VLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 304 GQVAREKALKSFRSGSVNVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRA 363 Query: 380 XXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPR 439 LVDWDEL RW IDKALGLG+PDPAETYS+SPHLYTEL+IP +A+GTVG P Sbjct: 364 GRTGVAVTLVDWDELPRWTMIDKALGLGSPDPAETYSSSPHLYTELSIPTDAAGTVGPPS 423 Query: 440 KAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNG 499 K+ K R T++ D+ G + A+ S++ +R R RGG+PVTGHP P A +G Sbjct: 424 KSGSKPRTTEKQDDQQGEKSGRAR----SDAGRRRRTRGGKPVTGHPATTPVA-----SG 474 Query: 500 KVVAETLPNSSSGSPSTN---VRRRRHRRKPTEVAEN 533 + ET S + SPS N RRRR RRKP V +N Sbjct: 475 ETATETGSGSGASSPSGNAGATRRRRRRRKPAGVQDN 511 >tr|O05855|O05855_MYCTU Tax_Id=1773 (rhlE)SubName: Full=ATP-dependent RNA helicase DeaD; SubName: Full=PROBABLE ATP-DEPENDENT RNA HELICASE RHLE;[Mycobacterium tuberculosis] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|C6DXF4|C6DXF4_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|C1AGY2|C1AGY2_MYCBT Tax_Id=561275 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Mycobacterium bovis] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|A5U7N3|A5U7N3_MYCTA Tax_Id=419947 (rhlE)SubName: Full=ATP-dependent RNA helicase RhlE;[Mycobacterium tuberculosis] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|A1KNL1|A1KNL1_MYCBP Tax_Id=410289 (rhlE)SubName: Full=Probable ATP-dependent RNA helicase rhlE;[Mycobacterium bovis] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|A5WSC3|A5WSC3_MYCTF Tax_Id=336982 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|A4KLB0|A4KLB0_MYCTU Tax_Id=395095 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis str. Haarlem] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|A2VP09|A2VP09_MYCTU Tax_Id=348776 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis C] Length = 527 Score = 713 bits (1841), Expect = 0.0 Identities = 378/528 (71%), Positives = 409/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLGVRDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|Q7TX01|Q7TX01_MYCBO Tax_Id=1765 (rhlE)SubName: Full=PROBABLE ATP-DEPENDENT RNA HELICASE RHLE;[Mycobacterium bovis] Length = 527 Score = 712 bits (1837), Expect = 0.0 Identities = 377/528 (71%), Positives = 408/528 (77%), Gaps = 26/528 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MTA T E FAKLG RDEIVRAL E GI++PFAIQELTLPLAL G+DVIGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGARDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--- 139 TFAFGVPLLQRI+ RPL+GAPR LVVVPTRELCLQV DDLAT KYLTA D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 140 ----RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 RR SVVSIYGGR YEPQIEAL+ GADVVV TPGRLLDLCQQGHLQL GLSVLVLDE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM +P HIRAEAPHS A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 256 VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAV 315 VHD T+QFVYRAHALDKVEL+SR+LQAR RGATMIFTRTKRTAQKV +EL ERGFAVGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 316 HGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXX 375 HGDLGQ+ARE AL+AFRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 376 XXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV 435 LVDWDEL RW ID+ALGLG+PDPAETYSNSPHLY ELAIPA A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 436 GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNP----- 490 G RK+Q +RR TD DG K+ A+ N+ +R R RGG+PVTGHP NP Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQHAR--------NTPRRRRTRGGKPVTGHPGTNPISSPI 472 Query: 491 -SADSLATNGKVVA-----ETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 D+ + G A + + S SG+ RRRR RR+PT + Sbjct: 473 VGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQD 520 >tr|A0PRA7|A0PRA7_MYCUA Tax_Id=362242 (rhlE)SubName: Full=ATP-dependent RNA helicase RhlE;[Mycobacterium ulcerans] Length = 517 Score = 710 bits (1832), Expect = 0.0 Identities = 373/517 (72%), Positives = 412/517 (79%), Gaps = 15/517 (2%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 + + T T FA+LGVRDEIVRAL ER I+ PFAIQELTLPLALAGDD+IGQARTGMGK Sbjct: 4 LKSTTETTPKTFAELGVRDEIVRALGERDIEGPFAIQELTLPLALAGDDLIGQARTGMGK 63 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADD---DN 139 TFAFGVPLLQR+S T RPL+GAPR LVVVPTRELCLQV +DLA AKYLTA D Sbjct: 64 TFAFGVPLLQRVSSGTGVRPLTGAPRALVVVPTRELCLQVTEDLAVAAKYLTATTETGDQ 123 Query: 140 RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEM 199 R SVVSIYGGRAYEPQIEAL+ GADVVV TPGRLLDL QQGHLQL GL VLVLDEADEM Sbjct: 124 RPLSVVSIYGGRAYEPQIEALRAGADVVVGTPGRLLDLSQQGHLQLGGLYVLVLDEADEM 183 Query: 200 LDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDT 259 LDLGF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM QP HIRAEAPHSLAVHDT Sbjct: 184 LDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMIQPTHIRAEAPHSLAVHDT 243 Query: 260 TQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDL 319 T+QFVYRAHALDKVEL++R+LQAR RGATMIFTRTKRTAQKV +ELNERGFAVGAVHGDL Sbjct: 244 TEQFVYRAHALDKVELVTRVLQARERGATMIFTRTKRTAQKVADELNERGFAVGAVHGDL 303 Query: 320 GQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXX 379 GQ+ARE AL++FR G+V+VLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRI Sbjct: 304 GQVAREKALKSFRRGSVNVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRA 363 Query: 380 XXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPR 439 LVDWDEL RW IDKALGLG+PDPAETYS+SPHLYTEL+IP +A+GTVG P Sbjct: 364 GRTGVAVTLVDWDELPRWTMIDKALGLGSPDPAETYSSSPHLYTELSIPTDAAGTVGPPS 423 Query: 440 KAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNG 499 K+ K R T++ D+ G + A+ S++ +R R RGG+PVTGHP P A +G Sbjct: 424 KSGSKPRTTEKQDDQQGEKSGRAR----SDAGRRRRTRGGKPVTGHPATTPVA-----SG 474 Query: 500 KVVAETLPNSSSGSPSTN---VRRRRHRRKPTEVAEN 533 + ET + SPS N RRRR RRKP V +N Sbjct: 475 ETATETGSGFGASSPSGNAGATRRRRRRRKPAGVQDN 511 >tr|Q73UQ4|Q73UQ4_MYCPA Tax_Id=1770 (rhlE)SubName: Full=RhlE;[Mycobacterium paratuberculosis] Length = 505 Score = 693 bits (1789), Expect = 0.0 Identities = 364/507 (71%), Positives = 399/507 (78%), Gaps = 8/507 (1%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MT PTST E FA+LGVRDEIVRAL E+GIQ PFAIQELTLPLALAGDD+IGQARTGMGK Sbjct: 1 MTTPTSTTELTFAQLGVRDEIVRALDEKGIQHPFAIQELTLPLALAGDDLIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRF 142 TFAFGVPLLQRI+ T R L+G PR LVVVPTRELCLQV DDL AK+LTAD R Sbjct: 61 TFAFGVPLLQRITAGTAPRALNGTPRALVVVPTRELCLQVTDDLTLAAKHLTADG-GRPL 119 Query: 143 SVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDL 202 SVV IYGGR YEPQI+AL+ GADVVV TPGRLLDL QQGHLQL GLSVLVLDEADEMLDL Sbjct: 120 SVVPIYGGRPYEPQIDALRAGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDL 179 Query: 203 GFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQ 262 GF PDIER+L QIP DRQSMLFSATMPDPIITLARTFM+QP HIRAEAPHS A HDTT Q Sbjct: 180 GFLPDIERILRQIPDDRQSMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTVQ 239 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 +VYRAHALDKVEL+SR+LQA RGATMIFTRTKRTAQKV +EL ERGF VGAVHGDLGQ+ Sbjct: 240 YVYRAHALDKVELVSRVLQAESRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQV 299 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL+AFRTG++DVLVATDVAARGIDIDDVTHVINYQ PEDE+ YVHRI Sbjct: 300 AREKALKAFRTGDIDVLVATDVAARGIDIDDVTHVINYQIPEDEQAYVHRIGRTGRAGKA 359 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQ 442 LVDWDEL RW IDKALGL P+PAETYSNSPHLY EL IPA A G VG RK Q Sbjct: 360 GVAVTLVDWDELARWALIDKALGLDVPEPAETYSNSPHLYEELGIPAGAGGRVGAARKPQ 419 Query: 443 VKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNGKVV 502 RR +R +G Q ++ A + +R R RGGQPV+GHP+ N +A S NG+ Sbjct: 420 GPRRSAER---ATGKPDQKSETATRRSGTRRRRTRGGQPVSGHPSGNGAASS---NGEAA 473 Query: 503 AETLPNSSSGSPSTNVRRRRHRRKPTE 529 A+ S G+P ++ RRRR RRKP + Sbjct: 474 ADAPAGSPPGNPGSS-RRRRRRRKPAD 499 >tr|A0QTQ8|A0QTQ8_MYCS2 Tax_Id=246196 SubName: Full=DEAD/DEAH box helicase;[Mycobacterium smegmatis] Length = 502 Score = 653 bits (1685), Expect = 0.0 Identities = 345/504 (68%), Positives = 389/504 (77%), Gaps = 10/504 (1%) Query: 33 AFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLLQ 92 +FA+LGVRDEIVRALAE GI+ PFAIQELTLPLALAGDD+IGQARTGMGKT+AFGVPLL Sbjct: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 Query: 93 RISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSIYGGRA 152 R+S + RPL+GAPR LVVVPTRELCLQV +DLA AK+L +D R+F+V SIYGGR Sbjct: 67 RVS-SDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTND-GRKFTVTSIYGGRP 124 Query: 153 YEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPDIERLL 212 YEPQIEAL+ G DVVV TPGRLLDL QQGHLQL GLSVLVLDEADEMLDLGF PDIER+L Sbjct: 125 YEPQIEALRKGVDVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERIL 184 Query: 213 GQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRAHALDK 272 P RQ+MLFSATMPDPIITLARTFM+QP HIRAEAPHS A HDTT Q+ YRAHALDK Sbjct: 185 QLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDK 244 Query: 273 VELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEAFR 332 VEL+SRILQARGRGATM+FTRTKRTAQKV++EL ERGF VGAVHGDLGQ ARE AL++FR Sbjct: 245 VELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFR 304 Query: 333 TGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXXXXLVDWD 392 TG +DVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRI LVDWD Sbjct: 305 TGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWD 364 Query: 393 ELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKRRKTDRDG 452 EL RWE IDKAL LG PDPAETYS+SPHLY +L IP +A+GTVG P K K +D D Sbjct: 365 ELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATK--ASDEDE 422 Query: 453 DKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSA--DSLATNGKVVAETLPNSS 510 + ++ + A+ S R R RGG+P+TGHP ++P A +S + + S Sbjct: 423 HRISSADRPARTRTRS----RRRTRGGKPLTGHPESHPEAHPESASAAPEDTEAAPAGES 478 Query: 511 SGSPSTNVRRRRHRRKPTEVAENG 534 T RRRR R + TE A G Sbjct: 479 EAGEQTTRRRRRRRPRKTEAATAG 502 >tr|Q1BC79|Q1BC79_MYCSS Tax_Id=164756 SubName: Full=DEAD/DEAH box helicase-like protein;[Mycobacterium sp.] Length = 507 Score = 650 bits (1678), Expect = 0.0 Identities = 348/513 (67%), Positives = 390/513 (76%), Gaps = 14/513 (2%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MT T++ + FA LGVRDEI RALAE GI QPFAIQELTLP+ALAGDD+IGQARTGMGK Sbjct: 1 MTPLTTSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRF 142 T+AFGVPLLQR++ T T + LSG PR L+VVPTRELCLQV DL+ AKYLTA D R+ Sbjct: 61 TYAFGVPLLQRVT-TDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGD--RKL 117 Query: 143 SVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDL 202 SVVSIYGGR YEPQIE+L+ GADVVV TPGRLLDL QQGHLQL GLSVLVLDEADEMLDL Sbjct: 118 SVVSIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDL 177 Query: 203 GFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQ 262 GF PDIER+L Q P RQ+MLFSATMPDPIITLARTFM+QP HIRAE+P S A HDTT Q Sbjct: 178 GFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQ 237 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 F YRAHALDKVE++SRILQA GRGATMIFTRTKRTAQKV +EL ERGF VGAVHGDLGQ Sbjct: 238 FAYRAHALDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQG 297 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL++FRTG VDVLVATDVAARGIDIDD+THVIN+Q PEDE+ YVHRI Sbjct: 298 AREKALKSFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKT 357 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPR-KA 441 LVDWDEL RW IDKALGL TPDPAETYS+SPHLY EL IP EA G+VG P+ +A Sbjct: 358 GVAVTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARA 417 Query: 442 QVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGH---PTNNPSADSLATN 498 KR + G++ G K AR S S R R R G+PVTGH P+ ++ N Sbjct: 418 AAKRSERPARGERDGDRDGDDKPAR-SRSRNRRRTRAGKPVTGHVEGSAEQPAVEAADGN 476 Query: 499 GKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVA 531 G ++ +G S RRR RR+P + A Sbjct: 477 GD------GDTEAGGESGQAGRRRRRRRPRKAA 503 >tr|A1UCR5|A1UCR5_MYCSK Tax_Id=189918 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium sp.] Length = 507 Score = 650 bits (1678), Expect = 0.0 Identities = 348/513 (67%), Positives = 390/513 (76%), Gaps = 14/513 (2%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MT T++ + FA LGVRDEI RALAE GI QPFAIQELTLP+ALAGDD+IGQARTGMGK Sbjct: 1 MTPLTTSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRF 142 T+AFGVPLLQR++ T T + LSG PR L+VVPTRELCLQV DL+ AKYLTA D R+ Sbjct: 61 TYAFGVPLLQRVT-TDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGD--RKL 117 Query: 143 SVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDL 202 SVVSIYGGR YEPQIE+L+ GADVVV TPGRLLDL QQGHLQL GLSVLVLDEADEMLDL Sbjct: 118 SVVSIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDL 177 Query: 203 GFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQ 262 GF PDIER+L Q P RQ+MLFSATMPDPIITLARTFM+QP HIRAE+P S A HDTT Q Sbjct: 178 GFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQ 237 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 F YRAHALDKVE++SRILQA GRGATMIFTRTKRTAQKV +EL ERGF VGAVHGDLGQ Sbjct: 238 FAYRAHALDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQG 297 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL++FRTG VDVLVATDVAARGIDIDD+THVIN+Q PEDE+ YVHRI Sbjct: 298 AREKALKSFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKT 357 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPR-KA 441 LVDWDEL RW IDKALGL TPDPAETYS+SPHLY EL IP EA G+VG P+ +A Sbjct: 358 GVAVTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARA 417 Query: 442 QVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGH---PTNNPSADSLATN 498 KR + G++ G K AR S S R R R G+PVTGH P+ ++ N Sbjct: 418 AAKRSERPARGERDGDRDGDDKPAR-SRSRNRRRTRAGKPVTGHVEGSAEQPAVEAADGN 476 Query: 499 GKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVA 531 G ++ +G S RRR RR+P + A Sbjct: 477 GD------GDTEAGGESGQAGRRRRRRRPRKAA 503 >tr|A3PWH1|A3PWH1_MYCSJ Tax_Id=164757 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium sp.] Length = 507 Score = 648 bits (1671), Expect = 0.0 Identities = 348/513 (67%), Positives = 388/513 (75%), Gaps = 14/513 (2%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MT T+ + FA LGVRDEI RALAE GI QPFAIQELTLP+ALAGDD+IGQARTGMGK Sbjct: 1 MTPLTTPVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRF 142 T+AFGVPLLQR++ T T + LSG PR L+VVPTRELCLQV DL+ AKYLTA D R+ Sbjct: 61 TYAFGVPLLQRVT-TDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGD--RKL 117 Query: 143 SVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDL 202 SVVSIYGGR YEPQIE+L+ GADVVV TPGRLLDL QQGHLQL GLSVLVLDEADEMLDL Sbjct: 118 SVVSIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDL 177 Query: 203 GFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQ 262 GF PDIER+L Q P RQ+MLFSATMPDPIITLARTFM+QP HIRAE+P S A HDTT Q Sbjct: 178 GFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQ 237 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 F YRAHALDKVE++SRILQA GRGATMIFTRTKRTAQKV +EL ERGF VGAVHGDLGQ Sbjct: 238 FAYRAHALDKVEMVSRILQADGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQG 297 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL++FRTG VDVLVATDVAARGIDIDD+THVIN+Q PEDE+ YVHRI Sbjct: 298 AREKALKSFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKT 357 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPR-KA 441 LVDWDEL RW IDKALGL TPDPAETYS+SPHLY EL IP EA G+VG P+ +A Sbjct: 358 GVAVTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARA 417 Query: 442 QVKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGH---PTNNPSADSLATN 498 KR + G++ G K AR S S R R R G+PVTGH P ++ N Sbjct: 418 AAKRSERPARGERDGDRDGDDKPAR-SRSRNRRRTRAGKPVTGHVEGSAEQPVVEAADGN 476 Query: 499 GKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVA 531 G ++ +G S RRR RR+P + A Sbjct: 477 GD------GDTEAGGESGQAGRRRRRRRPRKAA 503 >tr|A4TFD7|A4TFD7_MYCGI Tax_Id=350054 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium gilvum] Length = 505 Score = 645 bits (1665), Expect = 0.0 Identities = 341/522 (65%), Positives = 381/522 (72%), Gaps = 17/522 (3%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MT T+ P FA+LGVRDEIVRALAE GI+ FAIQELTLPLALAGDD+IGQARTGMGK Sbjct: 1 MTPVTTHPNPTFAQLGVRDEIVRALAENGIEHAFAIQELTLPLALAGDDLIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRF 142 TFAFGVPLL RI+ T T RPL+G PR LVVVPTRELC+QV +DL +KYL ADD R+ Sbjct: 61 TFAFGVPLLHRIT-TDTERPLTGIPRALVVVPTRELCIQVYEDLVHASKYLMADD-TRKL 118 Query: 143 SVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDL 202 +V +IYGGR YEPQIEALQ G DVVV TPGRLLDL QQGHLQL GL+VLVLDEADEMLDL Sbjct: 119 TVTAIYGGRPYEPQIEALQKGVDVVVGTPGRLLDLAQQGHLQLGGLNVLVLDEADEMLDL 178 Query: 203 GFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQ 262 GF PDIER+L QIP RQ+MLFSATMPDPIITLARTFM QP HIRAE A HDTT+Q Sbjct: 179 GFLPDIERILKQIPAKRQAMLFSATMPDPIITLARTFMTQPTHIRAEGVQGSATHDTTEQ 238 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 F YRAHALDKVE+++RILQA GRGATMIFTRTKRTAQKV +EL ERGF VGAVHGDLGQ Sbjct: 239 FAYRAHALDKVEMVARILQAEGRGATMIFTRTKRTAQKVADELGERGFRVGAVHGDLGQS 298 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL+ FR G+VDVLVATDVAARGIDIDD+THVIN+Q PEDE+ YVHRI Sbjct: 299 AREKALKGFRNGDVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKT 358 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQ 442 LVDWDEL RW IDKALGL TPDPAETYSNSPHLY EL IP EA G++G P Sbjct: 359 GIAVTLVDWDELPRWSMIDKALGLDTPDPAETYSNSPHLYDELNIPTEAGGSIGKPA--- 415 Query: 443 VKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNGKVV 502 R DK + +A R + R R RGGQ V+GHP P A ++ Sbjct: 416 -------RSADKPKREPREPRAERPARDRTRRRTRGGQSVSGHPEGTPDAADTSS----- 463 Query: 503 AETLPNSSSGSPSTNVRRRRHRRKPTEVAENGLDKNLAVQAN 544 +E + S+G + RRR RR+P + G + N Sbjct: 464 SEASDSDSAGDGAPRPARRRRRRRPNKATAAGTSAGTSAGTN 505 >tr|A1T613|A1T613_MYCVP Tax_Id=350058 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium vanbaalenii] Length = 494 Score = 645 bits (1664), Expect = 0.0 Identities = 344/514 (66%), Positives = 387/514 (75%), Gaps = 24/514 (4%) Query: 23 MTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGK 82 MT T+ P FA+LGVRDEIVRALAE GI+ FAIQELTLPLALAGDD+IGQARTGMGK Sbjct: 1 MTPVTTHPSPTFAQLGVRDEIVRALAENGIEHAFAIQELTLPLALAGDDLIGQARTGMGK 60 Query: 83 TFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRF 142 TFAFGVPLL RI+ T T RPL+G PR L+VVPTRELC+QV +DL +KYL AD+ R+ Sbjct: 61 TFAFGVPLLHRIT-TDTERPLTGIPRALIVVPTRELCIQVYEDLVGASKYLMADE-TRKL 118 Query: 143 SVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDL 202 +V +IYGGR YEPQIEALQ G DVVV TPGRLLDL QQGHLQL GLSVLVLDEADEMLDL Sbjct: 119 TVTAIYGGRPYEPQIEALQKGVDVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDL 178 Query: 203 GFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQ 262 GF PDIER+L QIP RQ+MLFSATMPDPIITLARTFM QP HIRAEAPHS A HD+T+Q Sbjct: 179 GFLPDIERILKQIPAKRQAMLFSATMPDPIITLARTFMTQPTHIRAEAPHSSATHDSTEQ 238 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 F YRAHALDKVE+++RILQA GRGATMIFTRTKRTAQKV +EL ERGF VGAVHGDLGQ Sbjct: 239 FAYRAHALDKVEMVARILQAEGRGATMIFTRTKRTAQKVADELGERGFKVGAVHGDLGQA 298 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL++FRTG VDVLVATDVAARGIDIDD+THVIN+Q PEDE+ YVHRI Sbjct: 299 AREKALKSFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKT 358 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQ 442 LVDWDEL RW IDKALGL TPDPAETYSNSPHLY EL IPAEA G++G P++ Sbjct: 359 GIAVTLVDWDELPRWSMIDKALGLDTPDPAETYSNSPHLYEELNIPAEAGGSIGRPKRTA 418 Query: 443 VKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHP--TNNPSADSLATNGK 500 K + R+ + TS ++ R R RGG+ V GHP T +A G Sbjct: 419 DKEPREPRERREKPTSNRS-----------RRRTRGGKSVGGHPEGTTEQAAPEADNAGA 467 Query: 501 VVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENG 534 E + SP+ RRR RR+P++ A G Sbjct: 468 EAPE-----GAASPA----RRRRRRRPSKAAAAG 492 >tr|B1MF01|B1MF01_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-dependent DEAD-box RNA helicase;[Mycobacterium abscessus] Length = 490 Score = 613 bits (1581), Expect = e-173 Identities = 326/507 (64%), Positives = 374/507 (73%), Gaps = 27/507 (5%) Query: 28 STAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFG 87 S E FA+LGVR EI RAL E GI+ PFAIQELTLPLALAG D+IGQARTGMGKT+AFG Sbjct: 2 SHIEHTFAQLGVRKEIARALREAGIEHPFAIQELTLPLALAGSDLIGQARTGMGKTYAFG 61 Query: 88 VPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSI 147 VPLL RI+ RPL+G PR LVVVPTRELC+QV +DL +KYL+A D R F+VVSI Sbjct: 62 VPLLHRIATGVEDRPLNGTPRALVVVPTRELCIQVYEDLTKASKYLSAGD--RDFTVVSI 119 Query: 148 YGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPD 207 YGGR YEPQIEAL+ GADVVV TPGRLLDL QQGHLQL GL++LVLDEADEMLDLGF PD Sbjct: 120 YGGRPYEPQIEALRAGADVVVGTPGRLLDLAQQGHLQLGGLAMLVLDEADEMLDLGFLPD 179 Query: 208 IERLLGQIPT---DRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFV 264 IER+L P+ RQSMLFSATMPDPIITLARTFM++P HIRAE P + +VHD+T+QFV Sbjct: 180 IERILALAPSADAGRQSMLFSATMPDPIITLARTFMNRPTHIRAEDPQASSVHDSTEQFV 239 Query: 265 YRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIAR 324 YRAHALDK+EL+SRILQA GRGATMIFTRTKRTAQKV++EL ERGFAVGAVHGDLGQIAR Sbjct: 240 YRAHALDKIELVSRILQADGRGATMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAR 299 Query: 325 ENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXX 384 E AL +FR+G ++VLVATDVAARGIDIDDVTHVINYQCPED+K YVHRI Sbjct: 300 EKALTSFRSGQINVLVATDVAARGIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGI 359 Query: 385 XXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVK 444 LVDWD++ RW+ IDKALGLG P+P ETYS SPHL+TEL IPA+ +G++G K Sbjct: 360 AVTLVDWDDIARWQLIDKALGLGVPEPDETYSTSPHLFTELNIPADVTGSIGEKFSGGPK 419 Query: 445 RRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNGKVVAE 504 RR + G A+ K RT R R R GQP P+ ++ Sbjct: 420 RR------EPRGERAEGEKPKRTRT---RRRTRAGQPTDESAAEAPAPEAA--------- 461 Query: 505 TLPNSSSGSPSTNVRRRRHRRKPTEVA 531 ++ G RRRR RR+P A Sbjct: 462 ----TADGDQQAPARRRRRRRRPNATA 484 >tr|C1B1G9|C1B1G9_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-dependent RNA helicase; EC=3.6.1.-;[Rhodococcus opacus] Length = 534 Score = 588 bits (1517), Expect = e-166 Identities = 314/502 (62%), Positives = 365/502 (72%), Gaps = 16/502 (3%) Query: 32 PAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLL 91 P FA+LGVRDE+VRAL E GI++ FAIQELTLPLALAGDD+IGQARTGMGKTF FGVPLL Sbjct: 38 PTFAELGVRDEVVRALDEIGIERTFAIQELTLPLALAGDDLIGQARTGMGKTFGFGVPLL 97 Query: 92 QRISVTTTARP-LSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSIYGG 150 RIS TT L G PR LV+VPTRELC+QV DL AKYL + N+ V++IYGG Sbjct: 98 HRISSGTTGTAALDGTPRALVIVPTRELCIQVTKDLEGAAKYLKGEK-NKPLEVLAIYGG 156 Query: 151 RAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPDIER 210 R YE QI LQ GADVVV TPGRLLDL QGHL L + VLVLDEADEMLDLGF PDIER Sbjct: 157 RPYETQIATLQKGADVVVGTPGRLLDLANQGHLILGKVEVLVLDEADEMLDLGFLPDIER 216 Query: 211 LLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRAHAL 270 +L +P RQ+MLFSATMP PIITLARTF+ QP HIRAE AVHD T Q +YRAHAL Sbjct: 217 ILNMVPDKRQTMLFSATMPGPIITLARTFLTQPTHIRAEQADDSAVHDRTSQHIYRAHAL 276 Query: 271 DKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEA 330 DK E+++R+LQA GRGATMIFTRTKRTAQKV++EL ERGFAVG+VHGDL Q+ARE AL+A Sbjct: 277 DKAEMVARVLQADGRGATMIFTRTKRTAQKVSDELAERGFAVGSVHGDLNQVAREKALKA 336 Query: 331 FRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXXXXLVD 390 FR+G +DVLVATDVAARGIDIDDVTHVINYQCPEDEK YVHRI LVD Sbjct: 337 FRSGKIDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVD 396 Query: 391 WDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKRRKTDR 450 WD++ RW+ IDKALGLG PDP ETYS+SPHLY EL+IPAEA+GT+ PR + +++ Sbjct: 397 WDDIPRWQLIDKALGLGIPDPVETYSSSPHLYEELSIPAEATGTIKRPRVEKAAPAQSED 456 Query: 451 DGDKSGTSAQAAKAARTSNSVQRHRIRGGQP--VTGHPTNNPSADSLATNGKVVAETLPN 508 ++G A+ + R + + R R RGG+P G + P+A A A T + Sbjct: 457 ADTENGEKAE--RTERPARTRTRRRTRGGRPADAVGPKSPEPTAPESA-----AASTDAD 509 Query: 509 SSSGSPSTNVRRRRHRRKPTEV 530 P RRR RR+ T+V Sbjct: 510 GEGSKP-----RRRRRRRTTKV 526 >tr|Q0S2V3|Q0S2V3_RHOSR Tax_Id=101510 SubName: Full=Probable cold-shock DEAD-box protein;[Rhodococcus sp.] Length = 555 Score = 585 bits (1507), Expect = e-165 Identities = 314/522 (60%), Positives = 367/522 (70%), Gaps = 35/522 (6%) Query: 32 PAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLL 91 P FA+LGVRDEIVRAL E GI++ FAIQELTLPLALAGDD+IGQARTGMGKTF FGVPLL Sbjct: 38 PTFAELGVRDEIVRALDEIGIERTFAIQELTLPLALAGDDLIGQARTGMGKTFGFGVPLL 97 Query: 92 QRISVTTTARP-LSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSIYGG 150 RIS TT L G PR LV+VPTRELC+QV DL AKYL + + + V++IYGG Sbjct: 98 HRISSGTTGTAALDGTPRALVIVPTRELCIQVTKDLEGAAKYLKGEKN--KLEVLAIYGG 155 Query: 151 RAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPDIER 210 R YE QI LQ GADVVV TPGRLLDL QGHL L + VLVLDEADEMLDLGF PDIER Sbjct: 156 RPYETQIATLQKGADVVVGTPGRLLDLANQGHLILGKVEVLVLDEADEMLDLGFLPDIER 215 Query: 211 LLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRAHAL 270 +LG +P RQ+MLFSATMP PIITLARTF+ QP HIRAE AVHD T Q +YRAHAL Sbjct: 216 ILGMVPDKRQTMLFSATMPGPIITLARTFLTQPTHIRAEQADDSAVHDRTSQHIYRAHAL 275 Query: 271 DKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEA 330 DK E+++R+LQA GRGATMIFTRTKRTAQKV ++L ERGF+VG+VHGDL Q+ARE AL+A Sbjct: 276 DKAEMVARVLQAEGRGATMIFTRTKRTAQKVADDLAERGFSVGSVHGDLNQVAREKALKA 335 Query: 331 FRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXXXXLVD 390 FRTG +DVLVATDVAARGIDIDDVTHVINYQCPEDEK YVHRI LVD Sbjct: 336 FRTGKIDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVD 395 Query: 391 WDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKRRKTDR 450 WD++ RW+ IDKALGLG PDPAETYS+SPHL+ EL+IPA +GT+ PR + ++ +R Sbjct: 396 WDDIPRWQLIDKALGLGIPDPAETYSSSPHLFEELSIPAGTTGTIKRPRVEKAEKVAPER 455 Query: 451 -----------------DGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSAD 493 + +G +A + R + + R R RGG+P AD Sbjct: 456 SENTGAERSENTGAERSENTDTGQGEKAERTERPARTRTRRRTRGGRP----------AD 505 Query: 494 SLATNGKVVAETLPNSSSGSPSTNVR-----RRRHRRKPTEV 530 S+ T P S++ S T+ RRR RR+ T+V Sbjct: 506 SVGPKSVSPEPTAPESAAPSGDTDGEGASKPRRRRRRRTTKV 547 >tr|Q5YQW7|Q5YQW7_NOCFA Tax_Id=37329 SubName: Full=Putative ATP-dependent RNA helicase;[Nocardia farcinica] Length = 1148 Score = 575 bits (1483), Expect = e-162 Identities = 314/524 (59%), Positives = 358/524 (68%), Gaps = 36/524 (6%) Query: 27 TSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAF 86 T+ P FA+LGVRDEIVRALAE GI++ FAIQELTLPLALAG+D+IGQARTGMGKTF F Sbjct: 30 TTHTPPTFAELGVRDEIVRALAEIGIERTFAIQELTLPLALAGEDLIGQARTGMGKTFGF 89 Query: 87 GVPLLQRISVTTTAR-PLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVV 145 GVPLL RI+ + PL G PR LV+VPTRELC+QV DDL KYL + V Sbjct: 90 GVPLLHRIATADSGTTPLDGTPRALVIVPTRELCIQVTDDLVRAGKYLR--NHKGALKVT 147 Query: 146 SIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFF 205 +IYGGR Y+ QI AL+ G DVVV TPGRLLDL +Q HL L + VLVLDEADEMLDLGF Sbjct: 148 AIYGGRPYDSQIAALREGVDVVVGTPGRLLDLAKQNHLILGKIGVLVLDEADEMLDLGFL 207 Query: 206 PDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVY 265 PDIER+L +P RQ+MLFSATMP PIITLARTF+ +P HIRAE PH AVHD T QFVY Sbjct: 208 PDIERILTMVPAKRQTMLFSATMPGPIITLARTFLTRPTHIRAEEPHDSAVHDRTAQFVY 267 Query: 266 RAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARE 325 RAHALDK ELI+R+LQA GRGATMIFTRTKRTAQKV ++L ERGFAVGAVHGDLGQ+ RE Sbjct: 268 RAHALDKAELIARVLQAEGRGATMIFTRTKRTAQKVADDLAERGFAVGAVHGDLGQVQRE 327 Query: 326 NALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXX 385 AL+ FR G +DVLVATDVAARGIDIDDVTHVINYQCPEDEK YVHRI Sbjct: 328 KALDKFRKGVIDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGVA 387 Query: 386 XXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKR 445 L+DWDEL+RW ID ALGLG P+P ETYS SPHL+++L IP G GT R+A R Sbjct: 388 VTLIDWDELNRWAAIDAALGLGIPEPVETYSRSPHLFSDLGIP---EGVTGTVRRAAPAR 444 Query: 446 RKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNG------ 499 + A + ART R R G+P+ N + D ++TNG Sbjct: 445 ---------TADETVAERPARTPRKRNRRRTLRGKPIDA-TQNGGAPDGVSTNGAAENGE 494 Query: 500 -----KVVAETLPNSS---------SGSPSTNVRRRRHRRKPTE 529 VA+T P S GS S RRRR R +E Sbjct: 495 PQAETAAVADTAPTPSQNQEHGGGEGGSSSRRKRRRRRRGSSSE 538 >tr|C2ARN5|C2ARN5_TSUPA Tax_Id=521096 SubName: Full=DNA/RNA helicase, superfamily II;[Tsukamurella paurometabola DSM 20162] Length = 536 Score = 551 bits (1419), Expect = e-154 Identities = 295/510 (57%), Positives = 348/510 (68%), Gaps = 28/510 (5%) Query: 32 PAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLL 91 P+FA+LGV IV AL +RGI++ FAIQELTLPLALAG+D+IGQARTGMGKT+ FGVPLL Sbjct: 36 PSFAELGVDQGIVDALGKRGIERTFAIQELTLPLALAGNDLIGQARTGMGKTYGFGVPLL 95 Query: 92 QRISVTTTA-------RPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN--RRF 142 R+ A R L G PR L++VPTRELC+QV DDLA + + R Sbjct: 96 DRLVTQARADVGEDGLRALDGTPRALIIVPTRELCVQVTDDLAQASDGVRVQTTKGERDL 155 Query: 143 SVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDL 202 + SIYGGR YE QIEALQ G DVVV TPGRLLDL QGHL L + +LVLDEADEMLDL Sbjct: 156 KITSIYGGRPYEAQIEALQKGVDVVVGTPGRLLDLANQGHLVLGKIQILVLDEADEMLDL 215 Query: 203 GFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQ 262 GF PDIER+L +PTDRQ+MLFSATMP PIITLARTF+ QP H+RAE AVH+ T Q Sbjct: 216 GFLPDIERILTMVPTDRQTMLFSATMPGPIITLARTFLKQPTHVRAEHHDDSAVHERTTQ 275 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 +VYRAHALDK EL++++LQA+GRGATMIFTRTKRTAQKV +EL ERGF VGAVHGDLGQ+ Sbjct: 276 YVYRAHALDKTELVAKVLQAQGRGATMIFTRTKRTAQKVADELGERGFKVGAVHGDLGQV 335 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL FR G++DVLVATDVAARGIDIDDVTHVIN+QCPED+K YVHRI Sbjct: 336 AREKALGKFRDGSIDVLVATDVAARGIDIDDVTHVINFQCPEDDKTYVHRIGRTGRAGKT 395 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQ 442 LVDWDELHRWE IDKALGLG P+P ETYS+S HL+T+L I + G++ RK Sbjct: 396 GTAVTLVDWDELHRWELIDKALGLGKPEPVETYSSSEHLFTDLGIDPKVKGSLPGVRKR- 454 Query: 443 VKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNGKVV 502 G + + +++ R R RGG+ G A + A G Sbjct: 455 -----------AEGEVVERTPREKRTSTRTRTRTRGGRAADG-------AAAAAEAGAPA 496 Query: 503 AETLPNSSSGSPSTNVRRRRHRRKPTEVAE 532 ET + G + +RRR RR + E Sbjct: 497 EETPSTRADGDDAAPRKRRRRRRSGAKKTE 526 >tr|D0LF13|D0LF13_9ACTO Tax_Id=526226 SubName: Full=DEAD/DEAH box helicase domain protein;[Gordonia bronchialis DSM 43247] Length = 543 Score = 550 bits (1416), Expect = e-154 Identities = 298/518 (57%), Positives = 355/518 (68%), Gaps = 25/518 (4%) Query: 22 HMTAPTST-AEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGM 80 H T T + P FA+LGV D IV ALA+ G FAIQELTLPLA+ GDD+IGQARTGM Sbjct: 14 HTTIVDDTHSSPTFAELGVDDRIVAALADDGKTHTFAIQELTLPLAMGGDDLIGQARTGM 73 Query: 81 GKTFAFGVPLLQRISVTTTA--RPLSGAPRGLVVVPTRELCLQVADDLATVAKYLT---- 134 GKTF FGVPLL R++ + R L PR L++VPTRELC+QV DL AK LT Sbjct: 74 GKTFGFGVPLLHRLAHAEESGLRALDNTPRALIIVPTRELCIQVTGDLEVAAKKLTDITL 133 Query: 135 ADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLD 194 AD R + SIYGGR YE QI L+ G DVVV TPGRLLDL QQGHL L ++VLVLD Sbjct: 134 ADGTVRPLKITSIYGGRPYESQIADLRAGVDVVVGTPGRLLDLAQQGHLILGKVAVLVLD 193 Query: 195 EADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSL 254 EADEMLDLGF PDIER++ +PT RQ+MLFSATMP PI+TLARTF+ +P HIRAE Sbjct: 194 EADEMLDLGFLPDIERIMSALPTPRQTMLFSATMPGPIVTLARTFLHRPTHIRAEHADDS 253 Query: 255 AVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGA 314 A+H+ T Q+VYRAHALDK EL++RILQA GRGATMIFTRTKRTAQKV ++L ERGF VGA Sbjct: 254 AIHERTTQYVYRAHALDKAELVARILQAEGRGATMIFTRTKRTAQKVADDLAERGFKVGA 313 Query: 315 VHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIX 374 VHGDLGQ+ARE AL+ FR G +DVLVATDVAARGIDIDDVTHVINYQ PED+K YVHRI Sbjct: 314 VHGDLGQVAREKALKRFRDGTIDVLVATDVAARGIDIDDVTHVINYQIPEDDKNYVHRIG 373 Query: 375 XXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGT 434 LVDWDELHRWE I+ ALGLG P+PAETYS S HL T+L+IP +G Sbjct: 374 RTGRAGRTGIAVTLVDWDELHRWELINNALGLGIPEPAETYSTSEHLRTDLSIPESTTGR 433 Query: 435 VGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQ-RHRIRGGQPVTG----HPTNN 489 + P++ + S + + + R N+ + R R RGG+ G H + Sbjct: 434 IVAPKR------------ESSEKTERVERTPRERNTTRSRRRTRGGKASEGEDSDHSAST 481 Query: 490 PSADSLATNGKVVAETLPNSSSG-SPSTNVRRRRHRRK 526 S D+ AT+ +++ SG + +T RRR RR+ Sbjct: 482 ASDDAPATSADATSQSPSGEGSGEATATGAPRRRRRRR 519 >tr|C0ZX20|C0ZX20_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-dependent RNA helicase; EC=3.6.1.-;[Rhodococcus erythropolis] Length = 474 Score = 530 bits (1365), Expect = e-148 Identities = 284/476 (59%), Positives = 323/476 (67%), Gaps = 11/476 (2%) Query: 65 LALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARP-LSGAPRGLVVVPTRELCLQVA 123 +ALAGDD+IGQARTGMGKTF FGVPLL RI L G PR L++VPTRELC+QVA Sbjct: 1 MALAGDDLIGQARTGMGKTFGFGVPLLHRIVTAENGTAVLDGTPRALIIVPTRELCIQVA 60 Query: 124 DDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHL 183 DL +KYL D R V+ IYGGR YE QI ALQ G DVVV TPGRLLDL Q HL Sbjct: 61 RDLENASKYLRVGD--RGLQVLPIYGGRPYEAQISALQKGVDVVVGTPGRLLDLANQSHL 118 Query: 184 QLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQP 243 L + VLVLDEADEMLDLGF PDIERL+G +P RQ+MLFSATMP PIITLARTF+ QP Sbjct: 119 ILGKVGVLVLDEADEMLDLGFLPDIERLMGMVPDKRQTMLFSATMPGPIITLARTFLTQP 178 Query: 244 IHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTN 303 HIRAE S AVHD T Q +YRAHALDK E+++R+LQA GRGATMIFTRTKRTAQKV + Sbjct: 179 THIRAEEAESSAVHDRTSQHIYRAHALDKAEMVARVLQAEGRGATMIFTRTKRTAQKVAD 238 Query: 304 ELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCP 363 +L ERGF+VGAVHGDLGQIARE AL+ FR G VDVLVATDVAARGIDIDDVTHVINYQCP Sbjct: 239 DLAERGFSVGAVHGDLGQIAREKALKGFRNGKVDVLVATDVAARGIDIDDVTHVINYQCP 298 Query: 364 EDEKMYVHRIXXXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYT 423 EDEK YVHRI LVDWD++ RW+ IDKAL LG PDP ETYS+SPHLY Sbjct: 299 EDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALSLGIPDPVETYSSSPHLYE 358 Query: 424 ELAIPAEASGTV----GTPRKAQVKRRKTDR-DGDKSGTSAQAAKAARTSNSVQRHRIRG 478 EL+IPA+A GTV P KA + TD+ D K+ + + A + R R R Sbjct: 359 ELSIPADAKGTVRRAKAAPEKAATDKAATDKADAPKTADADGNEEKAAPRRNRTRRRTRA 418 Query: 479 GQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEVAENG 534 G + A + + T + G+ RRR RR+P A G Sbjct: 419 GASTDAATSTTAGATTAPPSAPAATATENSDEDGAAKP---RRRRRRRPAASATAG 471 >tr|C6WM51|C6WM51_ACTMD Tax_Id=446462 SubName: Full=DEAD/DEAH box helicase domain protein;[Actinosynnema mirum] Length = 609 Score = 524 bits (1350), Expect = e-146 Identities = 292/563 (51%), Positives = 356/563 (63%), Gaps = 71/563 (12%) Query: 25 APTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTF 84 AP P F +LGVR+EIVRAL E GI++ FAIQELTLPLALAG+DVIGQARTG GKT Sbjct: 45 APVQPEAPTFTELGVREEIVRALGEAGIERAFAIQELTLPLALAGEDVIGQARTGTGKTL 104 Query: 85 AFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSV 144 FG+PLLQR+ P G P+ LVVVPTRELCLQV DL +K++ V Sbjct: 105 GFGIPLLQRVIT-----PGDGTPQALVVVPTRELCLQVTHDLTDASKHMDV-------RV 152 Query: 145 VSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGF 204 ++IYGGR YEPQI AL+ G DVVV TPGRLLDL +Q HL L + LVLDEADEMLDLGF Sbjct: 153 LAIYGGRPYEPQIAALRKGVDVVVGTPGRLLDLAEQRHLVLGKVRSLVLDEADEMLDLGF 212 Query: 205 FPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFV 264 PDIER+L +P +RQ+MLFSATMP PIITLARTF++QP H+RAE + AVH+ T+QF+ Sbjct: 213 LPDIERVLRMVPDERQTMLFSATMPGPIITLARTFLNQPTHVRAEENDAGAVHERTEQFI 272 Query: 265 YRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIAR 324 YRAHALDKVEL++R+LQAR RG +MIFTRTKRTAQKV +++ ERGFAV AVHGDLGQ AR Sbjct: 273 YRAHALDKVELLARVLQARDRGLSMIFTRTKRTAQKVADDMAERGFAVAAVHGDLGQGAR 332 Query: 325 ENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXX 384 E AL AFR+G +DVLVATDVAARGID++ VTHV+NYQCPEDEK YVHRI Sbjct: 333 EQALRAFRSGKIDVLVATDVAARGIDVEGVTHVVNYQCPEDEKTYVHRIGRTGRAGRTGV 392 Query: 385 XXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASG----------- 433 LVDWDE+ RW+ I AL LG DP ETYS S HL+ EL IPA ++G Sbjct: 393 AVTLVDWDEIPRWQMISDALNLGKRDPVETYSTSDHLFAELGIPAGSTGRLPLGLRTRAG 452 Query: 434 -------TVGTPRKAQVKRRKTDRDG--------------DKSGTSAQAAKAARTSNSVQ 472 + +K RR+T R G + G + QA ++ ++ Sbjct: 453 LDAEPEENLKGDKKPAKSRRRTGRTGRAGSGEGEAASSAPQQGGQAGQAGESGEEKSTRP 512 Query: 473 RHRIR---------------GGQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTN 517 R R R GG+ V+ + + SA + A + + SGS + Sbjct: 513 RRRRRSRGGVSSGEAAGDGAGGESVSASASASASASTSAATSAAASAQVGGGESGSGTGQ 572 Query: 518 VR------------RRRHRRKPT 528 + RRR RR+P+ Sbjct: 573 AQEPKAEASGDAKPRRRRRRRPS 595 >tr|C7MVL7|C7MVL7_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helicase, superfamily II;[Saccharomonospora viridis] Length = 559 Score = 521 bits (1343), Expect = e-146 Identities = 283/498 (56%), Positives = 338/498 (67%), Gaps = 21/498 (4%) Query: 32 PAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLL 91 P FA LGV +IVRAL+E GI++ F IQ LTLPLAL G+DVIGQARTG GKT FGVPLL Sbjct: 23 PTFADLGVHPDIVRALSESGIERTFDIQALTLPLALRGEDVIGQARTGTGKTLGFGVPLL 82 Query: 92 QRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSIYGGR 151 QR+ P G P+ LVVVPTRELCLQV+ DLA KYL + SIYGGR Sbjct: 83 QRL-----VTPGDGTPQALVVVPTRELCLQVSQDLAEAGKYLGV-------RITSIYGGR 130 Query: 152 AYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPDIERL 211 YE QI++L++G DVV+ TPGRLLDL +Q +L L +S LVLDEADEMLDLGF PDIER+ Sbjct: 131 PYESQIQSLRSGVDVVIGTPGRLLDLAEQRNLVLGKISTLVLDEADEMLDLGFLPDIERI 190 Query: 212 LGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRAHALD 271 L +P DRQ+MLFSATMP PI+TLARTF+ QP HIRAEA + A+H+ T QFVYRAH+LD Sbjct: 191 LRMVPEDRQTMLFSATMPGPILTLARTFLRQPTHIRAEAGETGAIHERTTQFVYRAHSLD 250 Query: 272 KVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEAF 331 K ELI+++LQA GRG TMIFTRTKRTAQKV ++L ERGFA AVHGDLGQ ARE AL AF Sbjct: 251 KPELIAKVLQAEGRGLTMIFTRTKRTAQKVADDLVERGFAAAAVHGDLGQGAREQALRAF 310 Query: 332 RTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXXXXLVDW 391 R+G VD+LVATDVAARGID++ VTHVINYQ PEDEK YVHRI LVDW Sbjct: 311 RSGKVDILVATDVAARGIDVEGVTHVINYQMPEDEKTYVHRIGRTGRAGRTGVAITLVDW 370 Query: 392 DELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKRRKTDRD 451 DE+ RW+ I LGL P+P ETYS S HL+T+L IP +A+G + ++ + D + Sbjct: 371 DEVPRWKLISDELGLDMPEPVETYSTSKHLFTDLGIPEDATGRLPLSKRTRAGLAAEDEE 430 Query: 452 --GDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSL--ATNGKVVAETLP 507 GD+ R QR R RGG+ +T T S + AT G +T Sbjct: 431 DFGDRRRRGRTGVSGRRPRR--QRRRTRGGREITSTTTRKESVERSDDATTG---TDTTD 485 Query: 508 NSSSGSPSTNVRRRRHRR 525 + P+T+ R R RR Sbjct: 486 ATDEAGPATDPPRPRRRR 503 >tr|C3JKW4|C3JKW4_RHOER Tax_Id=596309 SubName: Full=Dead/deah box helicase; Flags: Fragment;[Rhodococcus erythropolis SK121] Length = 385 Score = 514 bits (1325), Expect = e-144 Identities = 266/388 (68%), Positives = 294/388 (75%), Gaps = 6/388 (1%) Query: 65 LALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTARP-LSGAPRGLVVVPTRELCLQVA 123 +ALAGDD+IGQARTGMGKTF FGVPLL RI L G PR L++VPTRELC+QVA Sbjct: 1 MALAGDDLIGQARTGMGKTFGFGVPLLHRIVTAENGTAVLDGTPRALIIVPTRELCIQVA 60 Query: 124 DDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHL 183 DL +KYL D R V+ IYGGR YE QI ALQ G DVVV TPGRLLDL Q HL Sbjct: 61 RDLENASKYLRVGD--RGLQVLPIYGGRPYEAQISALQKGVDVVVGTPGRLLDLANQSHL 118 Query: 184 QLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQP 243 L + VLVLDEADEMLDLGF PDIERL+G +P RQ+MLFSATMP PIITLARTF+ QP Sbjct: 119 ILGKVGVLVLDEADEMLDLGFLPDIERLMGMVPDKRQTMLFSATMPGPIITLARTFLTQP 178 Query: 244 IHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTN 303 HIRAE S AVHD T Q +YRAHALDK E+++R+LQA GRGATMIFTRTKRTAQKV + Sbjct: 179 THIRAEEAESSAVHDRTSQHIYRAHALDKAEMVARVLQAEGRGATMIFTRTKRTAQKVAD 238 Query: 304 ELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCP 363 +L ERGF+VGAVHGDLGQIARE AL+ FR G VDVLVATDVAARGIDIDDVTHVINYQCP Sbjct: 239 DLAERGFSVGAVHGDLGQIAREKALKGFRNGKVDVLVATDVAARGIDIDDVTHVINYQCP 298 Query: 364 EDEKMYVHRIXXXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYT 423 EDEK YVHRI LVDWD++ RW+ IDKAL LG PDP ETYS+SPHLY Sbjct: 299 EDEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALSLGIPDPVETYSSSPHLYE 358 Query: 424 ELAIPAEASGTVGTPRKAQVKRRKTDRD 451 EL+IPA+A GTV RKA+ K D Sbjct: 359 ELSIPADAKGTV---RKAKAAPEKAATD 383 >tr|C8XJ80|C8XJ80_NAKMY Tax_Id=479431 SubName: Full=DEAD/DEAH box helicase domain protein;[Nakamurella multipartita] Length = 586 Score = 511 bits (1317), Expect = e-143 Identities = 271/465 (58%), Positives = 329/465 (70%), Gaps = 19/465 (4%) Query: 32 PAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLL 91 P FA+ GV + IV ALA+ GI++ FAIQ LTLP+AL G D+IGQARTGMGKT FGVPLL Sbjct: 45 PTFAEFGVDERIVTALADVGIERTFAIQALTLPIALTGSDLIGQARTGMGKTLGFGVPLL 104 Query: 92 QRIS----VTTTAR---PLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSV 144 QR+S VT + P+ APR +V+VPTRELC+QV DL + K L +V Sbjct: 105 QRLSHDKAVTVDEKGKLPVGRAPRAVVMVPTRELCVQVTRDLHALGKALG-------LAV 157 Query: 145 VSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGF 204 ++YGGRAYEPQI+ALQ G D+VV TPGRLLDL GHL L G+ VLVLDEADEMLDLGF Sbjct: 158 TAVYGGRAYEPQIKALQAGVDLVVGTPGRLLDLANSGHLVLGGVKVLVLDEADEMLDLGF 217 Query: 205 FPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFV 264 PD+E++L +PT +Q+MLFSATMP PI+TLARTFM +P+HIRAEA A+H TT+QFV Sbjct: 218 LPDMEKVLDLVPTVKQTMLFSATMPGPILTLARTFMSRPMHIRAEAAAEGAMHSTTRQFV 277 Query: 265 YRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIAR 324 YRAHALDKVE+++R+LQARGRG TM+FTRTKRTA KV +L ERGFA AVHGDLGQ AR Sbjct: 278 YRAHALDKVEMLARVLQARGRGLTMVFTRTKRTAAKVAEDLEERGFAAAAVHGDLGQGAR 337 Query: 325 ENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXX 384 E AL AFR G VDVLVATDVAARGID+DDVTHVIN+QCPE+EK YVHRI Sbjct: 338 EQALRAFRAGKVDVLVATDVAARGIDVDDVTHVINFQCPEEEKTYVHRIGRTGRAGKTGT 397 Query: 385 XXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVK 444 +DWD++ RW+ I++AL L DP ETYS SPHL+ EL IP +G + PR A+ + Sbjct: 398 AVSFIDWDDIPRWQLINQALELNFNDPVETYSTSPHLFAELDIPEGTTGEL--PRAARTR 455 Query: 445 R---RKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHP 486 + D ++G ++A RT + R +P G P Sbjct: 456 AGLDAEQVEDLGETGGKRRSAGRTRTKTTHADRPARADRPADGDP 500 >tr|A4F8L7|A4F8L7_SACEN Tax_Id=405948 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Saccharopolyspora erythraea] Length = 496 Score = 498 bits (1281), Expect = e-138 Identities = 273/506 (53%), Positives = 326/506 (64%), Gaps = 37/506 (7%) Query: 42 EIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTTAR 101 EIVRAL E GI+ FAIQELTLPLAL G+D+IGQARTG GKT FGVP+L R+ V Sbjct: 4 EIVRALGEAGIEHTFAIQELTLPLALRGEDLIGQARTGTGKTLGFGVPVLHRLQV----- 58 Query: 102 PLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQ 161 P G P+ LVVVPTRELC+QVA DL K+L +++YGGR YE QIEAL+ Sbjct: 59 PGDGTPQALVVVPTRELCVQVARDLTDAGKHLG-------IRTLAVYGGRPYEQQIEALR 111 Query: 162 TGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQS 221 +G D+V+ TPGRLLDL +Q HL L + LVLDEADEMLDLGF PDIER+L +P RQ+ Sbjct: 112 SGVDLVIGTPGRLLDLAEQQHLVLGKVRALVLDEADEMLDLGFLPDIERILHMVPEQRQT 171 Query: 222 MLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRAHALDKVELISRILQ 281 MLFSATMP PIITLARTF+ QP HIRAE + A+H+ T+QFVYRAHA+DK ELI+R +Q Sbjct: 172 MLFSATMPGPIITLARTFLRQPTHIRAEQADAGAIHERTKQFVYRAHAMDKTELIARAMQ 231 Query: 282 ARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVA 341 A GRG +MIFTRTKRTAQK+++EL ERGFA AVHGDLGQ ARE AL AFR+G VD+LVA Sbjct: 232 ANGRGLSMIFTRTKRTAQKLSDELTERGFAAAAVHGDLGQGAREQALRAFRSGKVDILVA 291 Query: 342 TDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXXXXLVDWDELHRWETID 401 TDVAARGID+ VTHV+N QCP+DEK YVHRI LVDWDE RW+ I Sbjct: 292 TDVAARGIDVGGVTHVVNLQCPDDEKTYVHRIGRTGRAGREGVAITLVDWDEEPRWKMIS 351 Query: 402 KALGLGTPDPAETYSNSPHLYTELAIPAEASGTV----------------GTPRKAQVKR 445 LGL P+P ETYS S HL+ +L IP++A+G + RK + K Sbjct: 352 DTLGLDKPEPVETYSTSAHLFADLDIPSDATGRLPLSKRTRAGLAAEPDEDAKRKPRSKP 411 Query: 446 RKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNGKVVAET 505 R+ R G + G SA+ R + QR R RGG P A Sbjct: 412 RRRTRGGGE-GKSAEGDGETRPAGRRQRRRTRGGVDAAAQPAE--------AKADATAPA 462 Query: 506 LPNSSSGSPSTNVRRRRHRRKPTEVA 531 + + RRRR RR+ E A Sbjct: 463 AGDGGADGGGERPRRRRRRRRSGEGA 488 >tr|Q2J6D3|Q2J6D3_FRASC Tax_Id=106370 SubName: Full=DEAD/DEAH box helicase-like;[Frankia sp.] Length = 649 Score = 481 bits (1238), Expect = e-133 Identities = 258/470 (54%), Positives = 314/470 (66%), Gaps = 25/470 (5%) Query: 24 TAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKT 83 + P S A P FA+LGVR E V AL E GI F IQELTLPLALA +D+IGQARTG GKT Sbjct: 77 STPGSPAAPTFAELGVRAETVSALTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKT 136 Query: 84 FAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFS 143 AFGVP++Q +V G P+ LVVVPTRELC+QV D+ T R Sbjct: 137 LAFGVPVVQ--TVLAAKEGADGRPQALVVVPTRELCVQVTADV-------TRAGARRGLR 187 Query: 144 VVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLG 203 V+S+YGGRAYEPQ+ AL+ G D+VV TPGRLLDL +Q L L+G+ LVLDEADEMLDLG Sbjct: 188 VLSVYGGRAYEPQLSALRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLDLG 247 Query: 204 FFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQF 263 F PD+ER++ Q+PT+RQ+MLFSATMP P+I+LAR FM +P+H+RAE P TT+Q Sbjct: 248 FLPDVERIMSQLPTERQTMLFSATMPGPVISLARRFMKRPVHVRAEQPDEGRTVPTTRQH 307 Query: 264 VYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIA 323 V+RAHALDK+E+++R+LQA GRG M+F RT+RTA KV +L +RGFA AVHGDLGQ Sbjct: 308 VFRAHALDKMEVLARVLQAGGRGLAMVFVRTRRTADKVAEDLAKRGFAAAAVHGDLGQGQ 367 Query: 324 RENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXX 383 RE AL AFR+G VDVLVATDVAARGIDI+ VTHV+NYQCPEDE +Y+HRI Sbjct: 368 REQALRAFRSGKVDVLVATDVAARGIDINGVTHVVNYQCPEDENVYLHRIGRTGRAGESG 427 Query: 384 XXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQV 443 VDWD+L RW ++KAL L P ETYS SPHLY L IPA A GT+ P A+ Sbjct: 428 VAITFVDWDDLPRWTLVNKALALPFDGPVETYSTSPHLYEALGIPAGAKGTL--PHAART 485 Query: 444 KRRKTDRDGDKSGTSAQAAK--------------AARTSNSVQRHRIRGG 479 + D + G S + + AA + + R R RGG Sbjct: 486 RAGLAAEDIEDLGQSGRGGRRGSRTGRDQDRSEPAAVPTRTRARRRTRGG 535 >tr|C0U8W9|C0U8W9_9ACTO Tax_Id=526225 SubName: Full=DNA/RNA helicase, superfamily II;[Geodermatophilus obscurus DSM 43160] Length = 611 Score = 475 bits (1222), Expect = e-132 Identities = 272/522 (52%), Positives = 326/522 (62%), Gaps = 48/522 (9%) Query: 25 APTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTF 84 AP + P F+ V ++V ALAE GI + FAIQELTLPLALAG+D+IGQARTG GKT Sbjct: 101 APVAEDAPLFSDFDVHPDVVAALAEAGITRTFAIQELTLPLALAGNDLIGQARTGTGKTL 160 Query: 85 AFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSV 144 FGVP+LQR V A G P+ LVVVPTRELC+QV+ DLAT R V Sbjct: 161 GFGVPMLQR--VVPPAEGGDGVPQALVVVPTRELCVQVSRDLATAGS-------KRGIRV 211 Query: 145 VSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGF 204 +IYGGRA+EPQ+ ALQ G ++VV TPGRLLDL Q+G L L + VLVLDEADEMLDLGF Sbjct: 212 QAIYGGRAFEPQVAALQAGVEIVVGTPGRLLDLAQRGDLILGKVKVLVLDEADEMLDLGF 271 Query: 205 FPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFV 264 PDIER+L +P RQ+MLFSATMP PI+TL+R+FM QP HIRA + T QF+ Sbjct: 272 LPDIERILAMVPDKRQTMLFSATMPGPIVTLSRSFMTQPTHIRAHGNDEGSTVPQTTQFI 331 Query: 265 YRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIAR 324 YRAH LDK EL+SR+LQAR R M+F RTKRTAQKV +EL ERGFA AVHGDLGQ AR Sbjct: 332 YRAHNLDKPELLSRVLQARDRSLVMVFCRTKRTAQKVADELVERGFAAAAVHGDLGQGAR 391 Query: 325 ENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXX 384 E AL AFR+G VDVLVATDVAARGID+ V+HV+NYQCPEDEK Y+HRI Sbjct: 392 EQALRAFRSGKVDVLVATDVAARGIDVTGVSHVVNYQCPEDEKTYLHRIGRTGRAGSEGV 451 Query: 385 XXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVK 444 LVDWD++ RW+ I+KAL L DP ETYS SP +Y++L +P A+G + PR + + Sbjct: 452 AVTLVDWDDIPRWQLINKALELDFTDPPETYSTSPWVYSDLDVPEGATGRL--PRSQRTR 509 Query: 445 R-------------RKTDRDGDKSGTSA-------QAAKAARTSNSVQRHRIRG----GQ 480 K R G G S + + AR S +R R G G Sbjct: 510 EGLDAETVEDLGETGKRTRSGGGPGASRGPGREDDEKPEGARKSRPRRRTRGSGAAAAGA 569 Query: 481 PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRR 522 P P+ ++ AT SP+ RRRR Sbjct: 570 AAADAPAEVPAGEATAT-------------GESPARKRRRRR 598 >tr|C1RN84|C1RN84_9CELL Tax_Id=446466 SubName: Full=DNA/RNA helicase, superfamily II;[Cellulomonas flavigena DSM 20109] Length = 598 Score = 474 bits (1221), Expect = e-131 Identities = 262/491 (53%), Positives = 319/491 (64%), Gaps = 28/491 (5%) Query: 8 PTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLAL 67 PT++ R+A A + +FA VR EIV ALA GI QPF IQ +TLP+AL Sbjct: 30 PTESPTGSRRA------ASVQAVDASFADFDVRPEIVAALAAAGITQPFPIQAMTLPVAL 83 Query: 68 AGDDVIGQARTGMGKTFAFGVPLLQRISVTTT----ARPLSGAPRGLVVVPTRELCLQVA 123 +G D+IGQA+TG GKT FGVPLL R+ P G P+ LVVVPTREL +QVA Sbjct: 84 SGHDIIGQAKTGTGKTLGFGVPLLHRVIAPGEDGYDRLPAPGEPQALVVVPTRELAVQVA 143 Query: 124 DDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHL 183 DLA + R+ +V +YGGRAYEPQ+EALQ GADVVV TPGR++DL Q HL Sbjct: 144 GDLAMAST-------GRKVRIVQVYGGRAYEPQVEALQRGADVVVGTPGRMIDLLNQRHL 196 Query: 184 QLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQP 243 +L + +VLDEADEMLDLGF PD+E+LL P +R +MLFSATMP ++ +AR +M QP Sbjct: 197 RLKHATEVVLDEADEMLDLGFLPDVEKLLAATPPNRHTMLFSATMPGAVVAMARRYMSQP 256 Query: 244 IHIRAEAPHSLA-VHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVT 302 HIRA AP +Q YRAHALDKVEL++RILQARGRG T++F RTKRTA KV Sbjct: 257 THIRASAPDDEGQTVKNIKQVAYRAHALDKVELLARILQARGRGLTIVFARTKRTAAKVA 316 Query: 303 NELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQC 362 +EL ERGFA GA+HGDLGQ ARE AL AFR G VDVLVATDVAARGID++DVTHV+NYQC Sbjct: 317 DELVERGFAAGAIHGDLGQGAREQALRAFRHGKVDVLVATDVAARGIDVEDVTHVVNYQC 376 Query: 363 PEDEKMYVHRIXXXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLY 422 PEDEK Y+HR VDWD++ RW IDKALGLG P+P ETYS+SPH+ Sbjct: 377 PEDEKTYLHRTGRTGRAGNKGTAVTFVDWDDIPRWGLIDKALGLGIPEPVETYSSSPHVR 436 Query: 423 TELAIPAEASGTVGTPRKAQVKRRKTD----RDGDKSGTSAQAAKAARTSNSVQR---HR 475 +L +P G G K+Q R D D ++G A+ AR+ + R R Sbjct: 437 EDLDVP---EGVTGRLPKSQQTRAGLDAEVLEDLGETGKRGGGARPARSGDRAGRGDGAR 493 Query: 476 IRGGQPVTGHP 486 GG+ +G P Sbjct: 494 GDGGRGRSGGP 504 >tr|A9WPJ4|A9WPJ4_RENSM Tax_Id=288705 SubName: Full=ATP-dependent RNA helicase;[Renibacterium salmoninarum] Length = 565 Score = 472 bits (1214), Expect = e-131 Identities = 263/535 (49%), Positives = 333/535 (62%), Gaps = 45/535 (8%) Query: 25 APTSTAEP------AFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQART 78 +PT+T +P FA VR +IV ALA+ GI PF IQ +TLP+AL G D+IGQA+T Sbjct: 23 SPTTTEDPHAEAAETFADFNVRADIVEALADAGIVHPFPIQSMTLPVALGGHDIIGQAKT 82 Query: 79 GMGKTFAFGVPLLQRISVTTT----ARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLT 134 G GKT FGVP+LQR++ A P+ GAP+ L+VVPTREL +QVA+DL T A+ Sbjct: 83 GTGKTLGFGVPVLQRVTAPKDEGYDALPVPGAPQALIVVPTRELAVQVANDLQTAAR--- 139 Query: 135 ADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLD 194 R + +IYGGRA+EPQIE+L G +VVV TPGRL+DL +Q HL L + ++VLD Sbjct: 140 ----KRGARITTIYGGRAFEPQIESLTKGVEVVVGTPGRLIDLFKQRHLNLKNVRMVVLD 195 Query: 195 EADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAP--H 252 EADEMLDLGF PD+E L+ P RQ+MLFSATMP PI+ +AR +M QP HIRA P Sbjct: 196 EADEMLDLGFLPDVETLMAATPAVRQTMLFSATMPGPIVAMARRYMTQPTHIRAADPDDE 255 Query: 253 SLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAV 312 L D +Q VYRAH++DK+E+++RILQARGRG T+IFT+TKRTA KV EL ERGFA Sbjct: 256 GLTKRDI-RQLVYRAHSMDKIEVVARILQARGRGRTIIFTKTKRTAAKVAEELAERGFAS 314 Query: 313 GAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHR 372 A+HGDLGQ ARE AL AFR VDVLVATDVAARGID+DDVTHVINYQC EDEK+Y+HR Sbjct: 315 AAIHGDLGQGAREQALRAFRNNKVDVLVATDVAARGIDVDDVTHVINYQCVEDEKIYLHR 374 Query: 373 IXXXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEAS 432 + VDWD++ W I+K LGL +P ETYS+SPHLY++L IP Sbjct: 375 VGRTGRAGNKGTAVTFVDWDDMPGWGLINKTLGLPFDEPVETYSSSPHLYSDLDIPEGTK 434 Query: 433 GTVGTPRKAQV--------------KRRKTDRDGDKSGT---SAQAAKAARTSNSVQRHR 475 G + ++ KR G G + S QR R Sbjct: 435 GRLPKSQRTHAGLNAEVLEDLGETGKRHGGQSTGSGRGNDNRNGAGGNRGGQSRDGQRRR 494 Query: 476 IRGGQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRKPTEV 530 +P +N P+AD+ A++ P++ + P+ RR R RR+ EV Sbjct: 495 SNDERPARSRNSNGPAADN-------AADSTPSTEASKPA-RARRSRTRRRNGEV 541 >tr|C0VCH3|C0VCH3_9MICO Tax_Id=446471 SubName: Full=DNA/RNA helicase, superfamily II;[Xylanimonas cellulosilytica DSM 15894] Length = 608 Score = 471 bits (1211), Expect = e-130 Identities = 260/539 (48%), Positives = 328/539 (60%), Gaps = 45/539 (8%) Query: 22 HMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMG 81 H + + +FA GVR EIV AL + GI PF IQ +TLP+AL D+IGQA+TG G Sbjct: 61 HAASAIQRQDVSFADFGVRQEIVDALTDVGITHPFPIQAMTLPVALQAHDIIGQAKTGTG 120 Query: 82 KTFAFGVPLLQRISVTTTARP------LSGAPRGLVVVPTRELCLQVADDLATVAKYLTA 135 KT FG+PLL R V P G P+ +VV PTREL +QVA DLAT + + + Sbjct: 121 KTLGFGIPLLNR--VVAPGEPGWDELVAPGKPQAVVVAPTRELAVQVAGDLATASAHRPS 178 Query: 136 DDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 V+ IYGGRAYEPQIE LQ GA+VVV TPGR++DL QGHL L +VLDE Sbjct: 179 ------LRVIQIYGGRAYEPQIEQLQRGAEVVVGTPGRMVDLLNQGHLNLLRAETIVLDE 232 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLA 255 ADEMLDLGF PD+E++L ++P R +MLFSATMP ++++AR +M QP HIRA P Sbjct: 233 ADEMLDLGFLPDVEKILSRLPAKRHTMLFSATMPGAVVSMARRYMSQPTHIRAADPDDEG 292 Query: 256 VH-DTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGA 314 V +Q VYRAHALDK+E+++R+LQA GRG +++F RTKRTA KV++EL +RGFA GA Sbjct: 293 VTVKNIKQVVYRAHALDKIEVLARLLQAEGRGRSIVFARTKRTAAKVSDELRDRGFAAGA 352 Query: 315 VHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIX 374 +HGDLGQ ARE AL A R G +DVLVATDVAARGID+DDVTHV+NYQCPEDE+ Y+HR+ Sbjct: 353 IHGDLGQGAREQALRALRHGKIDVLVATDVAARGIDVDDVTHVVNYQCPEDERTYLHRVG 412 Query: 375 XXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGT 434 VDWD++ RW IDKAL G P+P ETYS SPHL+ +L IPA G Sbjct: 413 RTGRAGNKGTAVTFVDWDDMPRWSLIDKALETGHPEPVETYSTSPHLFADLNIPAGTKGR 472 Query: 435 V------------------------GTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNS 470 + TP++AQ R RDG++SG + Sbjct: 473 LPKDKRTLAGLDAETLEDLGETGKRTTPQRAQGTRSGGPRDGERSGGQRSGGRDGGRDGG 532 Query: 471 VQ--RHRIRGGQ-PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRRK 526 R R R G+ TG T + +A S A + + P + GS RR R RR+ Sbjct: 533 RDGGRGRSRSGERAATGERTADSAASSAAPS---ATSSGPTAEGGSGDAQRRRSRTRRR 588 >tr|A6W765|A6W765_KINRD Tax_Id=266940 SubName: Full=DEAD/DEAH box helicase domain protein;[Kineococcus radiotolerans] Length = 565 Score = 469 bits (1207), Expect = e-130 Identities = 269/553 (48%), Positives = 330/553 (59%), Gaps = 40/553 (7%) Query: 24 TAPTSTAEP----AFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTG 79 TAP + E FA+ GV I ++LA GI PF IQ +TLP+AL+G D+IGQA+TG Sbjct: 16 TAPDTAVEAPHVGTFAEHGVDPRIAQSLAGAGITTPFPIQSMTLPVALSGHDIIGQAKTG 75 Query: 80 MGKTFAFGVPLLQRISV----TTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTA 135 GKT FGVPLLQR +V A P G P+ LV+VPTREL QVA DL T ++ A Sbjct: 76 TGKTLGFGVPLLQRTAVPGDPAYDALPNPGKPQALVIVPTRELATQVAGDLTTASRNYPA 135 Query: 136 DDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDE 195 ++++YGGRAYEPQI+AL G DVVV TPGRLLDL QQ HL LS + +VLDE Sbjct: 136 -------RILTVYGGRAYEPQIDALTKGVDVVVGTPGRLLDLAQQRHLDLSNVKCVVLDE 188 Query: 196 ADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAP-HSL 254 ADEMLDLGF PD+ERL+ Q RQ+MLFSATMP P++ +AR++M +P HIRA P Sbjct: 189 ADEMLDLGFLPDVERLIAQTDPARQTMLFSATMPGPVVAMARSYMSRPTHIRAVDPTDDG 248 Query: 255 AVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGA 314 A QF YR HALDKVE+++R+LQA GRG T++F+RTKRTA V +L ERGFA + Sbjct: 249 ATVAAITQFAYRTHALDKVEVLARMLQATGRGLTIVFSRTKRTAASVAEQLTERGFAAAS 308 Query: 315 VHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIX 374 +HGDLGQ ARE AL AFR G VDVLVATDVAARGID++DVTHVINYQCPEDEK Y+HRI Sbjct: 309 IHGDLGQGAREQALRAFRHGKVDVLVATDVAARGIDVEDVTHVINYQCPEDEKTYLHRIG 368 Query: 375 XXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPA----- 429 VDWDEL RW IDKALGLG +P ETYS SP+LY +L IPA Sbjct: 369 RTGRAGNTGVAVTFVDWDELPRWSLIDKALGLGFGEPVETYSTSPNLYEDLGIPAGTTGR 428 Query: 430 ----------------EASGTVGTPRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQR 473 E G VG + + ++ D G + G + A A V Sbjct: 429 LPRGQRTRAGLEAEQVEDLGEVGAAKGRRPRKDSRDGAGSRDGGARGAGPAPAAEEGVVE 488 Query: 474 HRIRGGQ--PVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRR-RRHRRKPTEV 530 R+ + N + A A P +S+ + + + R RR RR T Sbjct: 489 ERVARPRRDRQRRRTRNGVEVEETAVEAGSTATAPPAASAPAGAEDAERPRRRRRTRTRA 548 Query: 531 AENGLDKNLAVQA 543 E G + A A Sbjct: 549 DEAGTGTDAAASA 561 >tr|B5GQ57|B5GQ57_STRCL Tax_Id=443255 SubName: Full=Putative uncharacterized protein;[Streptomyces clavuligerus ATCC 27064] Length = 891 Score = 467 bits (1202), Expect = e-129 Identities = 279/542 (51%), Positives = 339/542 (62%), Gaps = 46/542 (8%) Query: 6 KTPTQNRFSHRKAFHPHMTAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPL 65 +TP++ S R A H T T F LG+ E AL GI PF IQE+TLP+ Sbjct: 22 RTPSR---SPRAASHRRGNTLT-TQHTTFRDLGILAETAEALEAVGILNPFPIQEMTLPV 77 Query: 66 ALAGDDVIGQARTGMGKTFAFGVPLLQRISVTTT-----ARP--LSGAPRGLVVVPTREL 118 AL+G DVIGQA+TG GKT FG+PLL+R++V ARP LS AP+ LVVVPTREL Sbjct: 78 ALSGTDVIGQAKTGTGKTLGFGLPLLERVTVPADVEAGRARPDQLSEAPQALVVVPTREL 137 Query: 119 CLQVADDLATVAKYLTADDDNRRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLC 178 C QV +DL T K R V++IYGGRAYEPQ+EAL+ G DV+V TPGRLLDL Sbjct: 138 CTQVTNDLLTAGKV-------RNVRVLAIYGGRAYEPQVEALRKGVDVIVGTPGRLLDLA 190 Query: 179 QQGHLQLSGLSVLVLDEADEMLDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLART 238 Q L LS + LVLDEADEMLDLGF PD+E+++ +P RQ+MLFSATMP +I LAR Sbjct: 191 GQKKLDLSQVRALVLDEADEMLDLGFLPDVEKIIQLLPAKRQTMLFSATMPGAVIGLARR 250 Query: 239 FMDQPIHIRAEAP--HSLAVHDTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKR 296 +M QP HIRA AP V + TQ+ VYRAH++DK E++SRILQA GRG MIF RTKR Sbjct: 251 YMSQPTHIRATAPDDEGATVANITQR-VYRAHSMDKPEMVSRILQAEGRGLAMIFCRTKR 309 Query: 297 TAQKVTNELNERGFAVGAVHGDLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTH 356 TA + ++L RGFA GAVHGDLGQ ARE AL AFR G VDVLV TDVAARGID++ VTH Sbjct: 310 TAADIADQLARRGFASGAVHGDLGQGAREQALRAFRNGKVDVLVCTDVAARGIDVEGVTH 369 Query: 357 VINYQCPEDEKMYVHRIXXXXXXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYS 416 VINYQ PEDEK Y+HR+ LVDWD++ RW+ I+KAL L PDP ETYS Sbjct: 370 VINYQSPEDEKTYLHRVGRTGRAGASGTAVTLVDWDDIPRWQLINKALDLKFPDPVETYS 429 Query: 417 NSPHLYTELAIPAEASGTVGTPRKAQVKRR-----------KTDRDGDKSGTS---AQAA 462 SPHL+ EL IPA GT G +A+ R +T G +S ++ A+ Sbjct: 430 TSPHLFEELGIPA---GTKGVLPRAERTRAGLAAEELEDLGETGARGRRSPSAPAPAREE 486 Query: 463 KAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRR 522 + ART QR R RGG V T + +T+ V + + +P T RRRR Sbjct: 487 RPARTRPPRQRRRTRGGSTV--ESTGTAAEPQRSTDSPV------SPDATAPRTPRRRRR 538 Query: 523 HR 524 R Sbjct: 539 TR 540 >tr|C7NK85|C7NK85_KYTSD Tax_Id=478801 SubName: Full=DNA/RNA helicase, superfamily II;[Kytococcus sedentarius] Length = 499 Score = 466 bits (1198), Expect = e-129 Identities = 249/474 (52%), Positives = 311/474 (65%), Gaps = 33/474 (6%) Query: 31 EPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPL 90 + FA G+ +IV AL GI PF IQ +TLP+AL D+IGQA+TG GKT FGVP+ Sbjct: 3 DKTFADFGIHPDIVAALEAGGITHPFPIQSMTLPVALDRQDIIGQAKTGTGKTLGFGVPM 62 Query: 91 LQRI------SVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSV 144 +Q + RP GAP+ L V PTREL LQVA DL A L V Sbjct: 63 VQNVVGPNHEGYDQLERP--GAPQALAVAPTRELALQVATDLERAAARLGV-------RV 113 Query: 145 VSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGF 204 +++YGGRAYEPQIEAL+ G ++VV TPGRL+DL ++GHL L+ +VLDEADEMLDLGF Sbjct: 114 LTVYGGRAYEPQIEALERGVEIVVGTPGRLIDLAERGHLTLAHARTVVLDEADEMLDLGF 173 Query: 205 FPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRA--EAPHSLAVHDTTQQ 262 PD+E+LL P R +MLFSATMP ++ +AR +M+QP HIRA E P + A + Q Sbjct: 174 LPDVEKLLAMTPAGRHTMLFSATMPGAVVAMARRYMNQPTHIRAMEEVPGAGATVEAIDQ 233 Query: 263 FVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQI 322 FVYRAHA+DKVE+++R+LQ+ GRG T++FTRTKRTA KV +L ERGFA A+HGDLGQ Sbjct: 234 FVYRAHAMDKVEMVARLLQSEGRGLTIVFTRTKRTAAKVAEQLVERGFAAAAIHGDLGQG 293 Query: 323 ARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXX 382 ARE AL AFRTG VDVLVATDVAARGID++DVTHV+NYQCPEDEK Y+HRI Sbjct: 294 AREQALRAFRTGKVDVLVATDVAARGIDVEDVTHVVNYQCPEDEKTYLHRIGRTGRAGKN 353 Query: 383 XXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPR--K 440 LVDWD+LHRW I++AL LG P+PAETYS S H Y + IPAE +G + + + + Sbjct: 354 GVAVTLVDWDDLHRWAVINRALELGAPEPAETYSTSAHFYADQRIPAEVTGELPSAQRTR 413 Query: 441 AQVKRRKTD---------RDGDKS-----GTSAQAAKAARTSNSVQRHRIRGGQ 480 A +K + D R GD+S G + + R Q R RGG+ Sbjct: 414 AGLKAEELDDAGDLKSSQRGGDRSAGGRGGQGGRGGQGGRGGRDDQGSRERGGR 467 >tr|A8L2H9|A8L2H9_FRASN Tax_Id=298653 SubName: Full=DEAD/DEAH box helicase domain protein;[Frankia sp.] Length = 671 Score = 465 bits (1197), Expect = e-129 Identities = 253/495 (51%), Positives = 312/495 (63%), Gaps = 30/495 (6%) Query: 25 APTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTF 84 A T + P FA++GVR E V ALAE GI +PFAIQELTLPLAL D+IGQARTG GKT Sbjct: 97 ADTPSLAPTFAEIGVRAETVAALAEVGIIRPFAIQELTLPLALERTDIIGQARTGTGKTL 156 Query: 85 AFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSV 144 AFG+P++Q VT G P+ LVVVPTRELC+QV D+A R V Sbjct: 157 AFGIPIVQ--VVTAPDEGADGRPQALVVVPTRELCVQVTADIARAGL-------GRGLRV 207 Query: 145 VSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGF 204 +S+YGGRAYEPQ+ AL+ G D+VV TPGRLLDL +Q L L+G+ LVLDEADEMLDLGF Sbjct: 208 LSVYGGRAYEPQLSALRAGVDIVVGTPGRLLDLARQKALDLAGVRALVLDEADEMLDLGF 267 Query: 205 FPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFV 264 PD+ER+L +P R +MLFSATMP P+I+LAR FM +P+H+RAE P TQQ V Sbjct: 268 LPDVERILAFLPEQRHTMLFSATMPGPVISLARRFMTRPVHVRAEQPDEGRTVPNTQQHV 327 Query: 265 YRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIAR 324 +RAHALDK+E+++R+LQA RG M+F RT+RTA KV +L RGFA VHGDLGQ R Sbjct: 328 FRAHALDKMEVLARVLQAESRGLAMVFVRTRRTADKVAEDLARRGFAAAPVHGDLGQGQR 387 Query: 325 ENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXX 384 E AL AFR G VDVLVATDVAARGID+ VTHV+NYQCPEDE Y+HRI Sbjct: 388 EQALRAFRAGKVDVLVATDVAARGIDVGGVTHVVNYQCPEDEHAYLHRIGRTGRAGGSGV 447 Query: 385 XXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQ-- 442 VDWD+L RW +++AL L +P ETYS S HL+ LAIPA GT+ P A+ Sbjct: 448 AVTFVDWDDLPRWTLVNRALALPFEEPLETYSTSEHLFELLAIPAGVKGTL--PHSARTR 505 Query: 443 -----------------VKRRKTDRDGDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGH 485 +RR +R+ ++ A+A RT + G G Sbjct: 506 AGLAAEEIEDLGEKGRGARRRTREREDERPARPARARVRQRTRGAGAAAAATGLTVADGS 565 Query: 486 PTNNPSADSLATNGK 500 + P+ D A +G+ Sbjct: 566 QADGPALDGPALDGQ 580 >tr|A4X1W4|A4X1W4_SALTO Tax_Id=369723 SubName: Full=DEAD/DEAH box helicase domain protein;[Salinispora tropica] Length = 621 Score = 464 bits (1195), Expect = e-128 Identities = 263/535 (49%), Positives = 325/535 (60%), Gaps = 50/535 (9%) Query: 24 TAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKT 83 TAP P FA+LG R E V AL GI + FAIQE LP+AL G D+IGQA TG GKT Sbjct: 89 TAPVRPEAPTFAELGARKETVDALNAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKT 148 Query: 84 FAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFS 143 FGVPLL+R V A G P+ LVVVPTREL +QVA DL A R Sbjct: 149 LGFGVPLLER--VFAPAEGGDGTPQALVVVPTRELGIQVAKDLH-------AAGSTRGVR 199 Query: 144 VVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLG 203 V+ IYGG AYEPQIEAL+TG +++V TPGRLLDL +Q L+L + LVLDEAD MLDLG Sbjct: 200 VLPIYGGVAYEPQIEALRTGVEILVGTPGRLLDLAKQKQLKLDRVRALVLDEADRMLDLG 259 Query: 204 FFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQF 263 F D+E++L +P +RQ+MLFSATMPDPI+ L+R F+ +P+ I A TQQ Sbjct: 260 FLDDVEKILAMLPEERQTMLFSATMPDPIVALSRRFLRRPVTIHAGHTAETGPSPQTQQL 319 Query: 264 VYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIA 323 YR H+L+K+E+++RILQA+GRG TMIFTRTKR A +V +L+ RGFAV AVHGDLGQ A Sbjct: 320 AYRTHSLNKIEIVARILQAKGRGLTMIFTRTKRAADRVAADLDFRGFAVAAVHGDLGQGA 379 Query: 324 RENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXX 383 RE AL AFRTG +D LVATDVAARGID+ VTHV+NY CPED+ Y HRI Sbjct: 380 RERALRAFRTGKIDTLVATDVAARGIDVSGVTHVLNYDCPEDQDTYTHRIGRTGRAGASG 439 Query: 384 XXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGT------ 437 VDWD++ RW IDK LGL P+P ETY SPHLY EL IP+E +GT+ T Sbjct: 440 VAVTFVDWDDMPRWRIIDKTLGLEMPEPPETYHTSPHLYAELDIPSEVTGTLPTDARTRA 499 Query: 438 ---------------------PRKAQVKRRKTDRDGDKSG----TSAQAAKAARTSNSV- 471 PR+ + R+ R GD SG ++ + +A T+ Sbjct: 500 GLSAEVEEDLGGGSRRGDGRGPRRGTGRDRRRGRGGDASGGAGSSTTEPGEAGETAERTP 559 Query: 472 -QRHRIRGGQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRR 525 +R R RGG+ VT T P+ ++ T + S G+ + RRRR RR Sbjct: 560 RRRRRRRGGEVVT---TGEPAVVTVETGAAATTD-----SPGADAPKPRRRRRRR 606 >tr|A7BEI8|A7BEI8_9ACTO Tax_Id=411466 SubName: Full=Putative uncharacterized protein;[Actinomyces odontolyticus ATCC 17982] Length = 581 Score = 464 bits (1193), Expect = e-128 Identities = 258/509 (50%), Positives = 323/509 (63%), Gaps = 22/509 (4%) Query: 33 AFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLLQ 92 +FA GV D IV AL ++GI PF IQ LTL AL D+IGQA+TG GKT FG+P+L+ Sbjct: 64 SFADFGVTDPIVDALEDQGITHPFPIQALTLGPALERHDIIGQAKTGTGKTLGFGIPVLE 123 Query: 93 RI------SVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVS 146 + P P+ L+++PTREL QVA DL AKYL+ +V Sbjct: 124 DVIAPDEEGYEDLLNP--NKPQALIILPTRELTKQVAQDLREAAKYLST-------RIVE 174 Query: 147 IYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFP 206 IYGG A+EPQIEAL+ GAD+VV TPGRL+DL ++GHL LSG+ +VLDEADEMLDLGF P Sbjct: 175 IYGGVAFEPQIEALERGADIVVGTPGRLIDLLRKGHLHLSGVETVVLDEADEMLDLGFLP 234 Query: 207 DIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSL-AVHDTTQQFVY 265 D+E LL ++P +R +MLFSATMP P++ LAR FM QP HIRA+ P +T +Q +Y Sbjct: 235 DVETLLSRVPENRHTMLFSATMPGPVVALARRFMVQPTHIRAQDPDDQNQTVNTVKQVIY 294 Query: 266 RAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARE 325 R HA++KVE+++RILQA GRG T+IF RTKRTA ++ +L RGFAVG++HGDLGQ ARE Sbjct: 295 RVHAMNKVEVVARILQAEGRGRTVIFCRTKRTAARLGEDLTARGFAVGSLHGDLGQGARE 354 Query: 326 NALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXX 385 AL AFR G VDVLVATDVAARGID+DDVTHVINYQCPEDEK+Y+HRI Sbjct: 355 QALRAFRNGKVDVLVATDVAARGIDVDDVTHVINYQCPEDEKIYIHRIGRTGRAGNSGTA 414 Query: 386 XXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKR 445 VDWD+ RW I KALGLG PDP ETY SPHL+T+L IP GT G +A+ R Sbjct: 415 VTFVDWDDTPRWSLISKALGLGVPDPLETYHTSPHLFTDLHIP---EGTTGRLPRAKRTR 471 Query: 446 RKTDRD--GDKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHP-TNNPSADSLATNGKVV 502 D + D G+S + R S R RGG+ + + SA + G Sbjct: 472 AGLDAEVLEDLGGSSPRREGRGRGSRGGSRGASRGGRGRSARSGGTSDSARGSRSRGSQD 531 Query: 503 AETLPNSSSGSPSTNVRRRRHRRKPTEVA 531 + N+ G S R R R + ++ A Sbjct: 532 GDRTLNAGKGGRSDRGTRGRGRGEHSQHA 560 >tr|A8M058|A8M058_SALAI Tax_Id=391037 SubName: Full=DEAD/DEAH box helicase domain protein;[Salinispora arenicola] Length = 548 Score = 463 bits (1192), Expect = e-128 Identities = 261/534 (48%), Positives = 323/534 (60%), Gaps = 49/534 (9%) Query: 24 TAPTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKT 83 TAP S P FA+LG R E V ALA GI + FAIQE LP+AL G D+IGQA TG GKT Sbjct: 17 TAPVSPEAPTFAELGARQETVDALAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKT 76 Query: 84 FAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFS 143 FGVPLL++ V A G P+ LVVVPTREL +QVA DL A R Sbjct: 77 LGFGVPLLEQ--VLAPAEGGDGTPQALVVVPTRELGIQVAKDLQ-------AAGSTRGVR 127 Query: 144 VVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLG 203 V+ IYGG AYEPQIEAL++G +++V TPGRLLDL +Q HL+L + LVLDEAD MLDLG Sbjct: 128 VLPIYGGVAYEPQIEALRSGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLG 187 Query: 204 FFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQF 263 F D+ER+L +P DRQ+MLFSATMPDPI+ L+R F+ +P+ I A TQQ Sbjct: 188 FLDDVERILAILPEDRQTMLFSATMPDPIVALSRRFLRRPVTIHAGHTAETGPSPQTQQL 247 Query: 264 VYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIA 323 YR H+L+K+E+++RILQARGRG TMIFTRTKR A +V +L+ RGFAV AVHGDLGQ A Sbjct: 248 AYRTHSLNKIEIVARILQARGRGLTMIFTRTKRAADRVAADLDFRGFAVAAVHGDLGQGA 307 Query: 324 RENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXX 383 RE AL AFRTG +D LVATDVAARGID+ VTHV+NY CPED+ Y HRI Sbjct: 308 RERALRAFRTGKIDTLVATDVAARGIDVSGVTHVLNYDCPEDQDTYTHRIGRTGRAGASG 367 Query: 384 XXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGT------ 437 VDWD++ RW IDK LGL P+P ETY SPHLY +L I E +GT+ T Sbjct: 368 VAVTFVDWDDMPRWRIIDKTLGLDMPEPPETYHTSPHLYADLDISPEVTGTLPTGARTRA 427 Query: 438 ---------------------PRKAQVKRRKTDRDGDKSGTSAQAAKAARTSNSVQ---- 472 R+ + R+ DR GD +A + A + + + Sbjct: 428 GLSAEVEEDLGGRARRGDSRGTRRGAGRNRRRDRGGDAGRGAAATTEPAEATETAERPPR 487 Query: 473 -RHRIRGGQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRRRHRR 525 R R RGG+ V+ + P+ + T+ V + G+ + RRRR RR Sbjct: 488 RRQRRRGGEVVS---SGQPAVTTAETDEPAVVD-----PQGAAAPKPRRRRRRR 533 >tr|C0XV82|C0XV82_9CORY Tax_Id=525263 SubName: Full=Helicase;[Corynebacterium lipophiloflavum DSM 44291] Length = 430 Score = 463 bits (1191), Expect = e-128 Identities = 245/437 (56%), Positives = 303/437 (69%), Gaps = 19/437 (4%) Query: 23 MTAPTSTAE---PAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTG 79 M PT+ AE P FA+LGV EIV AL E GI F+IQEL PLALAG DVIGQARTG Sbjct: 1 MLTPTNPAEQLAPTFAELGVAAEIVDALHELGITHTFSIQELAAPLALAGKDVIGQARTG 60 Query: 80 MGKTFAFGVPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN 139 MGKT+AFGVPLL R+ L G PR L++VPTREL +QV +DL+ AKY Sbjct: 61 MGKTYAFGVPLLDRVFDDADVAELDGTPRALIIVPTRELAVQVGEDLSRAAKYTPV---- 116 Query: 140 RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEM 199 + ++YGGR YE QI L +G DVVV TPGRL+DL +G+LQL ++VLVLDEADEM Sbjct: 117 ---RITTVYGGRPYEAQIAVLSSGVDVVVGTPGRLIDLLNRGNLQLDRVAVLVLDEADEM 173 Query: 200 LDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDT 259 LDLGFFPDI++L +P Q+MLFSATMP PI+TLAR+ M++P+HIRAEA ++ + H T Sbjct: 174 LDLGFFPDIQKLWAALPQPVQAMLFSATMPGPILTLARSLMNRPVHIRAEAANTPSTHST 233 Query: 260 TQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDL 319 T+Q V+R+H +DK+E+ +RILQARGRG T++FTR KRTA +V +L ERGF VG+VHGDL Sbjct: 234 TRQVVFRSHRMDKLEVTARILQARGRGRTIVFTRMKRTAAEVARDLAERGFDVGSVHGDL 293 Query: 320 GQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXX 379 GQ ARE ALEAFR+G V +LVATDVAARGID+DDVTHVIN+Q P+D YVHRI Sbjct: 294 GQGAREQALEAFRSGEVSILVATDVAARGIDVDDVTHVINFQTPDDPMTYVHRIGRTGRA 353 Query: 380 XXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVG--- 436 LV +DE +W I+ LGL PDP +S SP LY L IP A VG Sbjct: 354 GQTGIAVTLVGFDEGQKWTAINAELGLEMPDPPAWFSTSPELYEALDIPDSAGERVGPAV 413 Query: 437 ------TPRKAQVKRRK 447 +PR+ + ++R+ Sbjct: 414 TVHGDPSPRRPRERKRR 430 >tr|B8HBT2|B8HBT2_ARTCA Tax_Id=452863 SubName: Full=DEAD/DEAH box helicase domain protein;[Arthrobacter chlorophenolicus] Length = 561 Score = 462 bits (1190), Expect = e-128 Identities = 258/523 (49%), Positives = 326/523 (62%), Gaps = 38/523 (7%) Query: 26 PTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFA 85 P AE +FA VR +IV +L++ GI PF IQ +TLP+AL+G D+IGQA+TG GKT Sbjct: 31 PHEIAEKSFADYNVRQDIVDSLSDAGITHPFPIQAMTLPVALSGHDIIGQAKTGTGKTLG 90 Query: 86 FGVPLLQRISVTTTAR----PLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRR 141 FG+P LQR+ A + GAP+ LV+VPTREL +QVA DL A R Sbjct: 91 FGIPALQRVVGRDDAGYDKLAVPGAPQALVIVPTRELAVQVASDLQ-------AASTKRN 143 Query: 142 FSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLD 201 + +IYGGRAYEPQ+EAL+ G +VVV TPGRL+DL +Q HL L + ++VLDEADEMLD Sbjct: 144 ARIATIYGGRAYEPQVEALKNGVEVVVGTPGRLIDLYRQKHLSLKNVRIVVLDEADEMLD 203 Query: 202 LGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAP--HSLAVHDT 259 LGF PD+E ++ P RQ++LFSATMP P+I +AR +M QP HIRA P L D Sbjct: 204 LGFLPDVETIIAGTPAVRQTLLFSATMPGPVIAMARRYMTQPTHIRAADPDDEGLTKRDI 263 Query: 260 TQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDL 319 +Q +YRAH++DK E+++RILQARGRG T+IFT+TKRTA KV EL +RGFA A+HGDL Sbjct: 264 -RQLIYRAHSMDKTEVVARILQARGRGRTIIFTKTKRTAAKVAEELVDRGFAAAAIHGDL 322 Query: 320 GQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXX 379 GQ ARE AL AFR VDVLVATDVAARGID+DDVTHVINYQC EDEK+Y+HR+ Sbjct: 323 GQGAREQALRAFRNNKVDVLVATDVAARGIDVDDVTHVINYQCVEDEKIYLHRVGRTGRA 382 Query: 380 XXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTV---- 435 VDWD++ RW I+KALGL P+P ETYS+SPHLY EL IP G + Sbjct: 383 GNKGTAVTFVDWDDVPRWALINKALGLNVPEPVETYSSSPHLYEELDIPEGTKGRLPRNK 442 Query: 436 ---------------GTPRKAQVKRRKTD-RDGDKSGTSAQAAKAARTSNSVQR-HRIRG 478 T +K + R D RD + G S + R+S + + R R Sbjct: 443 RTLAGVDAEVLEDLGETGKKNSRESRGNDGRDREGRGRSRSGGRDGRSSEAGRSGERRRR 502 Query: 479 GQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRR 521 P T+ P+A A ++ +S + P T RRR Sbjct: 503 TSPDAAETTSAPAAGPEAA---AASDAEKSSRTRRPRTRTRRR 542 >tr|A1R8B9|A1R8B9_ARTAT Tax_Id=290340 SubName: Full=Putative ATP-dependent RNA helicase;[Arthrobacter aurescens] Length = 566 Score = 462 bits (1190), Expect = e-128 Identities = 255/536 (47%), Positives = 330/536 (61%), Gaps = 46/536 (8%) Query: 26 PTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFA 85 P E +FA VR +IV +LA+ GI PF IQ +TLP+AL+G D+IGQA+TG GKT Sbjct: 31 PHEIEEKSFADFNVRADIVESLADAGITHPFPIQAMTLPVALSGHDIIGQAKTGTGKTLG 90 Query: 86 FGVPLLQRISVTTTAR----PLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRR 141 FG+P LQR++ A + GAP+ LV+VPTREL +QVA+DL ++ R Sbjct: 91 FGIPALQRVAGRDDAGYAKLAVPGAPQALVIVPTRELAVQVANDLQAASR-------KRN 143 Query: 142 FSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLD 201 + +IYGGRAYEPQI+ALQ G ++VV TPGRL+DL +Q HL L + +++LDEADEMLD Sbjct: 144 ARIATIYGGRAYEPQIDALQKGVEIVVGTPGRLIDLYKQKHLSLKNVKMVILDEADEMLD 203 Query: 202 LGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHS--LAVHDT 259 LGF PD+E L+ P RQ++LFSATMP P+I +AR +M QP HIRA P+ L D Sbjct: 204 LGFLPDVETLIAGTPAVRQTLLFSATMPGPVIAMARRYMTQPTHIRAADPNDEGLTKRDI 263 Query: 260 TQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDL 319 +Q +YRAH++DK E+++RILQARGRG T+IFT+TKRTA KV EL +RGFA A+HGDL Sbjct: 264 -RQLIYRAHSMDKTEVVARILQARGRGRTIIFTKTKRTAAKVAEELVDRGFAAAAIHGDL 322 Query: 320 GQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXX 379 GQ ARE AL AFR VDVLVATDVAARGID+DDVTHVINYQC EDEK+Y+HR+ Sbjct: 323 GQGAREQALRAFRNNKVDVLVATDVAARGIDVDDVTHVINYQCVEDEKIYLHRVGRTGRA 382 Query: 380 XXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPR 439 VDWD++ RW I+KALGL P+P ETYS+SPHLYT+L IP G + PR Sbjct: 383 GNKGTAVTFVDWDDMPRWGLINKALGLSVPEPVETYSSSPHLYTDLDIPEGTKGRL--PR 440 Query: 440 KAQV------------------------KRRKTDRDGDKSGTSAQAAKAARTSNSVQRHR 475 +V R RDG + G ++ ++ +S + Sbjct: 441 NKRVLAGVDAEVLEDLGETGKKNARSGGSGRDGGRDGKRDGGRGRSGRSGDAESSESK-- 498 Query: 476 IRGGQPVTGHPTNNPSADSLATNGKVVAET-LPNSSSGSPSTNVRRRRHRRKPTEV 530 G+ ++D A +ET + + RR R RR+ EV Sbjct: 499 ---GEGGRNRTRRRRTSDGEAAPAAGASETRTATADNAEKPARTRRTRTRRRNGEV 551 >tr|C0W125|C0W125_9ACTO Tax_Id=525245 SubName: Full=ATP-dependent RNA helicase;[Actinomyces coleocanis DSM 15436] Length = 528 Score = 462 bits (1190), Expect = e-128 Identities = 255/507 (50%), Positives = 322/507 (63%), Gaps = 30/507 (5%) Query: 30 AEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVP 89 A+ FA G+ EI AL+ +GI PF IQ LTLP+ALAG D+IGQA+TG GKT FG+P Sbjct: 40 ADKTFADFGINTEICDALSAKGITYPFPIQALTLPVALAGRDIIGQAKTGTGKTLGFGLP 99 Query: 90 LLQRISVTTTARPLS-----GAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSV 144 L ++ +A+ + G P+ +V+VPTRELC QVA DL AK + + Sbjct: 100 TLMKVHGPASAKYATEVHYQGHPQAMVIVPTRELCKQVAADLRAAAKQTSV-------RI 152 Query: 145 VSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGF 204 IYGG A+EPQI+AL G D++V TPGRL+DL ++ LQL G++ +VLDEADEMLDLGF Sbjct: 153 TEIYGGAAFEPQIDALTKGTDLIVGTPGRLIDLLKRKVLQLHGVNTVVLDEADEMLDLGF 212 Query: 205 FPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRA-EAPHSLAVHDTTQQF 263 PD+E LL ++P RQ+MLFSATMP I+ LAR +M QP HIRA EA A T +Q Sbjct: 213 LPDVEILLSRVPQTRQTMLFSATMPGEIVALARRYMKQPTHIRAQEADDQGATVKTVKQV 272 Query: 264 VYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIA 323 +YR HAL+K+E+++RILQAR RG +IFT+TKRTA ++ +L+ RGFAV ++HGDLGQ A Sbjct: 273 IYRCHALNKIEVVARILQARERGLAVIFTKTKRTAATLSEDLSARGFAVASLHGDLGQGA 332 Query: 324 RENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXX 383 RE A+ AFR+G VDVLVATDVAARGID+DDVTHVINYQCPEDEK+Y+HRI Sbjct: 333 REQAMRAFRSGKVDVLVATDVAARGIDVDDVTHVINYQCPEDEKIYLHRIGRTGRAGASG 392 Query: 384 XXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQV 443 VDWD++ RW I KAL LG P+P ETY SPHLYT+L IP E SG R + Sbjct: 393 TAVTFVDWDDVPRWGLISKALNLGVPEPLETYHTSPHLYTDLDIPTEVSG-----RLPRA 447 Query: 444 KRRKTDRDG----DKSGTSAQAAKAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNG 499 KR + D D SG ++ S S +R R G Q N + N Sbjct: 448 KRTRAGLDAEEYQDVSGKGRRSFGRQNRSGSQRRSRRVGSQ--------NSDSRGRCANR 499 Query: 500 KVVAETLPNSSSGSPSTNVRRRRHRRK 526 LP + SG + RRRR R+ Sbjct: 500 NADGAGLPPAKSGEAARPQRRRRRIRR 526 >tr|A0JYP4|A0JYP4_ARTS2 Tax_Id=290399 SubName: Full=DEAD/DEAH box helicase domain protein;[Arthrobacter sp.] Length = 585 Score = 462 bits (1189), Expect = e-128 Identities = 263/553 (47%), Positives = 332/553 (60%), Gaps = 56/553 (10%) Query: 26 PTSTAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFA 85 P E +FA VR +IV +LA+ GI PF IQ +TLP+ALAG D+IGQA+TG GKT Sbjct: 31 PHEIEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLG 90 Query: 86 FGVPLLQRI------SVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDN 139 FG+P LQR+ A P GAP+ LV+VPTREL +QVA DL A+ Sbjct: 91 FGIPALQRVVGRDDPGFDKLAVP--GAPQALVIVPTRELAVQVAKDLENAAR-------K 141 Query: 140 RRFSVVSIYGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEM 199 R + +IYGGRAYEPQ+++LQ G ++VV TPGRL+DL +Q HL L + +++LDEADEM Sbjct: 142 RNARIATIYGGRAYEPQVDSLQKGVEIVVGTPGRLIDLYKQKHLSLKNVKIVILDEADEM 201 Query: 200 LDLGFFPDIERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAP--HSLAVH 257 LDLGF PD+E L+ P RQ++LFSATMP P+I +AR +M QP HIRA P L Sbjct: 202 LDLGFLPDVETLIAGTPAVRQTLLFSATMPGPVIAMARRYMTQPTHIRAADPDDEGLTKR 261 Query: 258 DTTQQFVYRAHALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHG 317 D +Q +YRAH++DK+E+++RILQARGRG T+IFT+TKRTA KV EL +RGFA A+HG Sbjct: 262 DI-RQLIYRAHSMDKIEVVARILQARGRGRTIIFTKTKRTAAKVAEELVDRGFAAAAIHG 320 Query: 318 DLGQIARENALEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXX 377 DLGQ ARE AL AFR VDVLVATDVAARGID+DDVTHVINYQC EDEK+Y+HR+ Sbjct: 321 DLGQGAREQALRAFRNNKVDVLVATDVAARGIDVDDVTHVINYQCVEDEKIYLHRVGRTG 380 Query: 378 XXXXXXXXXXLVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGT 437 VDWD++ RW I+KALGL P+P ETYS+SPHLY EL IP G + Sbjct: 381 RAGNKGTAVTFVDWDDMPRWGLINKALGLSVPEPVETYSSSPHLYEELDIPEGTKGRL-- 438 Query: 438 PRKAQV--------------KRRKTDR---------------------DGDKSGTSAQAA 462 PR +V +KT R G G ++ + Sbjct: 439 PRDKRVLAGVDAEVLEDLGETGKKTGRGSARDGGRDTARGGSTGGGRDSGRSGGRDSRRS 498 Query: 463 KAARTSNSVQRHRIRGGQPVTGHPTNNPSADSLATNGKVVAETLPNSSSGSPSTNVRRR- 521 +A + +S R R G+ N +A A V A + +T RRR Sbjct: 499 EAGSSRDSSGREGARSGERRRRSSDNTAAAVPAADAAPVAAAPASAPAEVDRATRARRRT 558 Query: 522 RHRRKPTEVAENG 534 R RR+ EV G Sbjct: 559 RTRRRNGEVVGGG 571 >tr|C8NWB3|C8NWB3_9CORY Tax_Id=585529 (deaD)SubName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.1.-;[Corynebacterium genitalium ATCC 33030] Length = 440 Score = 461 bits (1185), Expect = e-127 Identities = 238/446 (53%), Positives = 309/446 (69%), Gaps = 7/446 (1%) Query: 28 STAEPAFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFG 87 S +P FA+LGV EIV AL E GI++ F+IQELTLPLALAG D+IGQARTGMGKTFAFG Sbjct: 2 SDQQPTFAELGVAAEIVEALGESGIERVFSIQELTLPLALAGRDLIGQARTGMGKTFAFG 61 Query: 88 VPLLQRISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSI 147 VPLL R+ L G PR LV+ PTREL +QV++DL A + +I Sbjct: 62 VPLLDRVFDDAAIEELDGTPRALVITPTRELAVQVSEDLTLAASKTPV-------RLTTI 114 Query: 148 YGGRAYEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPD 207 YGGR Y+ Q+ AL+ G DVVV TPGRLLDL ++G L L +++LVLDEADEMLDLGF PD Sbjct: 115 YGGRPYDEQLNALEAGVDVVVGTPGRLLDLHERGDLVLDRVAILVLDEADEMLDLGFLPD 174 Query: 208 IERLLGQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRA 267 I+RL G + Q+MLFSATMP PI+ LAR M++P+HIRAE+ S +HDTT+Q V+ + Sbjct: 175 IQRLWGALSQPLQTMLFSATMPAPILKLAREMMNKPVHIRAESADSSQLHDTTKQVVFVS 234 Query: 268 HALDKVELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENA 327 H +DK E+++R+LQA GRG T+IFTRTKRTA +V ++ RGFAVG+VHGDLGQ ARE + Sbjct: 235 HKMDKPEVVARVLQADGRGRTIIFTRTKRTAAEVAEDVARRGFAVGSVHGDLGQSARERS 294 Query: 328 LEAFRTGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIXXXXXXXXXXXXXX 387 LEAFR G+V++LVATDVAARGID+DDVTHVINYQ P+D YVHRI Sbjct: 295 LEAFRKGDVEILVATDVAARGIDVDDVTHVINYQTPDDPMTYVHRIGRTGRAGRTGTAVT 354 Query: 388 LVDWDELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKRRK 447 LV +DE +W+ I LGL P+P +S SP L+ L+IP +A +VG R+ ++ Sbjct: 355 LVGFDETGKWKIISDELGLDMPEPPSWFSTSPELFDALSIPEDAKSSVGPAREVHGIPKR 414 Query: 448 TDRDGDKSGTSAQAAKAARTSNSVQR 473 + +G K + +++ +R+ + +R Sbjct: 415 SGGEGQKQRSRSRSGSGSRSRSGRRR 440 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.317 0.132 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 3,899,066,398 Number of extensions: 163904151 Number of successful extensions: 554435 Number of sequences better than 10.0: 19701 Number of HSP's gapped: 520853 Number of HSP's successfully gapped: 21118 Length of query: 544 Length of database: 3,808,957,724 Length adjustment: 143 Effective length of query: 401 Effective length of database: 2,214,033,822 Effective search space: 887827562622 Effective search space used: 887827562622 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 83 (36.6 bits)