BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML0875 (353 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q9CCF1|COX2_MYCLE Tax_Id=1769 (ctaC)RecName: Full=Probable cy... 657 0.0 tr|B8ZQL4|B8ZQL4_MYCLB Tax_Id=561304 (ctaC)SubName: Full=Putativ... 657 0.0 sp|P63854|COX2_MYCTU Tax_Id=1773 (ctaC)RecName: Full=Cytochrome ... 564 e-159 sp|P63855|COX2_MYCBO Tax_Id=1765 (ctaC)RecName: Full=Cytochrome ... 564 e-159 tr|C6DPK8|C6DPK8_MYCTK Tax_Id=478434 SubName: Full=Transmembrane... 564 e-159 tr|C1AQB5|C1AQB5_MYCBT Tax_Id=561275 (ctaC)SubName: Full=Putativ... 564 e-159 tr|A5U4M8|A5U4M8_MYCTA Tax_Id=419947 (ctaC)SubName: Full=Cytochr... 564 e-159 tr|A1KKP2|A1KKP2_MYCBP Tax_Id=410289 (ctaC)SubName: Full=Probabl... 564 e-159 tr|A5WPH0|A5WPH0_MYCTF Tax_Id=336982 SubName: Full=Transmembrane... 564 e-159 tr|A2VJU1|A2VJU1_MYCTU Tax_Id=348776 SubName: Full=Transmembrane... 564 e-159 tr|B2HGW8|B2HGW8_MYCMM Tax_Id=216594 (ctaC)SubName: Full=Transme... 544 e-153 tr|A0PTN4|A0PTN4_MYCUA Tax_Id=362242 (ctaC)SubName: Full=Transme... 540 e-151 sp|Q73YL5|COX2_MYCPA Tax_Id=1770 (ctaC)RecName: Full=Probable cy... 535 e-150 tr|A0QF07|A0QF07_MYCA1 Tax_Id=243243 SubName: Full=Cytochrome c ... 531 e-149 tr|A0R057|A0R057_MYCS2 Tax_Id=246196 SubName: Full=Cytochrome c ... 488 e-136 tr|A1TB08|A1TB08_MYCVP Tax_Id=350058 SubName: Full=Cytochrome c ... 484 e-135 tr|A4TBI6|A4TBI6_MYCGI Tax_Id=350054 SubName: Full=Cytochrome c ... 473 e-131 tr|Q1B6S9|Q1B6S9_MYCSS Tax_Id=164756 SubName: Full=Cytochrome c ... 446 e-123 tr|A3Q1R0|A3Q1R0_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome c ... 446 e-123 tr|A1UI96|A1UI96_MYCSK Tax_Id=189918 SubName: Full=Cytochrome c ... 446 e-123 tr|B1MNZ2|B1MNZ2_MYCA9 Tax_Id=561007 SubName: Full=Probable cyto... 444 e-122 tr|C1A125|C1A125_RHOE4 Tax_Id=234621 (ctaC)SubName: Full=Cytochr... 366 3e-99 tr|C3JJA0|C3JJA0_RHOER Tax_Id=596309 SubName: Full=Cytochrome c ... 366 3e-99 sp|Q5YZ37|COX2_NOCFA Tax_Id=37329 (ctaC)RecName: Full=Probable c... 361 8e-98 tr|Q0SHM2|Q0SHM2_RHOSR Tax_Id=101510 SubName: Full=Probable cyto... 348 4e-94 tr|C1AUA4|C1AUA4_RHOOB Tax_Id=632772 (ctaC)SubName: Full=Cytochr... 348 4e-94 tr|D0LAX5|D0LAX5_9ACTO Tax_Id=526226 SubName: Full=Cytochrome c ... 336 3e-90 tr|C2ASW1|C2ASW1_TSUPA Tax_Id=521096 RecName: Full=Cytochrome c ... 310 2e-82 tr|C2GKI0|C2GKI0_9CORY Tax_Id=548478 (ctaC)RecName: Full=Cytochr... 301 6e-80 tr|C0VV07|C0VV07_9CORY Tax_Id=548477 (ctaC)RecName: Full=Cytochr... 301 6e-80 tr|C6RAZ9|C6RAZ9_9CORY Tax_Id=553206 SubName: Full=Putative cyto... 300 1e-79 tr|C2BNF6|C2BNF6_9CORY Tax_Id=525264 (ctaC)SubName: Full=Cytochr... 300 1e-79 tr|C8RRE5|C8RRE5_CORJE Tax_Id=525262 (ctaC)SubName: Full=Cytochr... 300 2e-79 tr|Q4JWC9|Q4JWC9_CORJK Tax_Id=306537 (ctaC)RecName: Full=Cytochr... 300 2e-79 tr|C4LI14|C4LI14_CORK4 Tax_Id=645127 SubName: Full=Cytochrome c ... 298 7e-79 tr|C0WK65|C0WK65_9CORY Tax_Id=525260 (ctaC)RecName: Full=Cytochr... 296 3e-78 tr|A4QFR0|A4QFR0_CORGB Tax_Id=340322 RecName: Full=Cytochrome c ... 293 2e-77 sp|Q8NNK2|COX2_CORGL Tax_Id=1718 (ctaC)RecName: Full=Cytochrome ... 293 3e-77 tr|B1VHF8|B1VHF8_CORU7 Tax_Id=504474 SubName: Full=Cytochrome c ... 292 4e-77 tr|C2CNF2|C2CNF2_CORST Tax_Id=525268 (ctaC)RecName: Full=Cytochr... 288 5e-76 sp|Q6NG98|COX2_CORDI Tax_Id=1717 (ctaC)RecName: Full=Cytochrome ... 284 1e-74 tr|C0XRX5|C0XRX5_9CORY Tax_Id=525263 (ctaC)SubName: Full=Cytochr... 283 2e-74 tr|C5VDB4|C5VDB4_9CORY Tax_Id=553207 RecName: Full=Cytochrome c ... 283 3e-74 tr|C0E4J1|C0E4J1_9CORY Tax_Id=566549 RecName: Full=Cytochrome c ... 283 3e-74 tr|C3PHJ0|C3PHJ0_CORA7 Tax_Id=548476 (ctaC)SubName: Full=Cytochr... 281 8e-74 sp|Q8FNQ7|COX2_COREF Tax_Id=152794 (ctaC)RecName: Full=Cytochrom... 275 8e-72 tr|C8NQ48|C8NQ48_COREF Tax_Id=196164 (ctaC)SubName: Full=Cytochr... 275 8e-72 tr|C8NTI2|C8NTI2_9CORY Tax_Id=585529 (ctaC)SubName: Full=Cytochr... 269 3e-70 tr|C6W9F6|C6W9F6_ACTMD Tax_Id=446462 RecName: Full=Cytochrome c ... 255 7e-66 tr|C4RLQ6|C4RLQ6_9ACTO Tax_Id=219305 RecName: Full=Cytochrome c ... 238 1e-60 >sp|Q9CCF1|COX2_MYCLE Tax_Id=1769 (ctaC)RecName: Full=Probable cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; Flags: Precursor;[Mycobacterium leprae] Length = 353 Score = 657 bits (1694), Expect = 0.0 Identities = 324/353 (91%), Positives = 325/353 (92%) Query: 1 VTARELVCSQRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLN 60 +TARELVCSQRVGQGLSRRLRP SGCSWSDALAIGWPEGITPEAHLN Sbjct: 1 MTARELVCSQRVGQGLSRRLRPLVLAVTLGVLVVTLSGCSWSDALAIGWPEGITPEAHLN 60 Query: 61 RQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLII 120 RQLW WGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLII Sbjct: 61 RQLWIGAVVASLVVGVIVWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLII 120 Query: 121 SMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKA 180 SMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKA Sbjct: 121 SMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKA 180 Query: 181 MVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLN 240 MVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLN Sbjct: 181 MVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLN 240 Query: 241 SADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNF 300 SADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNF Sbjct: 241 SADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNF 300 Query: 301 EVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ 353 EVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ Sbjct: 301 EVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ 353 >tr|B8ZQL4|B8ZQL4_MYCLB Tax_Id=561304 (ctaC)SubName: Full=Putative cytochrome C oxidase chain II; EC=1.9.3.1;[Mycobacterium leprae] Length = 353 Score = 657 bits (1694), Expect = 0.0 Identities = 324/353 (91%), Positives = 325/353 (92%) Query: 1 VTARELVCSQRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLN 60 +TARELVCSQRVGQGLSRRLRP SGCSWSDALAIGWPEGITPEAHLN Sbjct: 1 MTARELVCSQRVGQGLSRRLRPLVLAVTLGVLVVTLSGCSWSDALAIGWPEGITPEAHLN 60 Query: 61 RQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLII 120 RQLW WGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLII Sbjct: 61 RQLWIGAVVASLVVGVIVWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLII 120 Query: 121 SMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKA 180 SMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKA Sbjct: 121 SMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKA 180 Query: 181 MVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLN 240 MVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLN Sbjct: 181 MVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLN 240 Query: 241 SADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNF 300 SADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNF Sbjct: 241 SADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNF 300 Query: 301 EVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ 353 EVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ Sbjct: 301 EVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ 353 >sp|P63854|COX2_MYCTU Tax_Id=1773 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; AltName: Full=Mtb92; Flags: Precursor;[Mycobacterium tuberculosis] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >sp|P63855|COX2_MYCBO Tax_Id=1765 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; Flags: Precursor;[Mycobacterium bovis] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >tr|C6DPK8|C6DPK8_MYCTK Tax_Id=478434 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >tr|C1AQB5|C1AQB5_MYCBT Tax_Id=561275 (ctaC)SubName: Full=Putative transmembrane cytochrome c oxidase subunit II; EC=1.9.3.1;[Mycobacterium bovis] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >tr|A5U4M8|A5U4M8_MYCTA Tax_Id=419947 (ctaC)SubName: Full=Cytochrome c oxidase subunit II;[Mycobacterium tuberculosis] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >tr|A1KKP2|A1KKP2_MYCBP Tax_Id=410289 (ctaC)SubName: Full=Probable transmembrane cytochrome C oxidase (Subunit ii) ctaC; EC=1.9.3.1;[Mycobacterium bovis] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >tr|A5WPH0|A5WPH0_MYCTF Tax_Id=336982 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >tr|A2VJU1|A2VJU1_MYCTU Tax_Id=348776 SubName: Full=Transmembrane cytochrome C oxidase (Subunit II) ctaC;[Mycobacterium tuberculosis C] Length = 363 Score = 564 bits (1454), Expect = e-159 Identities = 270/340 (79%), Positives = 292/340 (85%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCSWSDALAIGWPEGITPEAHLNRQLWXXXXX 69 QR G +R LR SGCSWS+AL IGWPEGITPEAHLNR+LW Sbjct: 18 QRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVI 77 Query: 70 XXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVI 129 WGLIFWS +FHRKK TDTELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+ Sbjct: 78 ASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVV 137 Query: 130 VQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKD 189 VQ+KML +AKDPEVVID+T+FQWNWKFGYQRV+FKDGTLTYDG DP RK+AMVSKPEGKD Sbjct: 138 VQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKD 197 Query: 190 SHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFW 249 +GEELVG VRGLNTEDR YLNFDKVETLGT+TEIPVLVLP+GKRIEFQ+ SADV+H+FW Sbjct: 198 KYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFW 257 Query: 250 VPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPND 309 VP+FLFKRDVMPNPVANNSVNVFQ+EEITKTGAFVGHCAEMCGTYHSMMNFEVRVV PND Sbjct: 258 VPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPND 317 Query: 310 FKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQL 349 FKAYLQQRIDGKTNAEAL+ I QPPLAVTTHPFDTRRG+L Sbjct: 318 FKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGEL 357 >tr|B2HGW8|B2HGW8_MYCMM Tax_Id=216594 (ctaC)SubName: Full=Transmembrane cytochrome C oxidase (Subunit II) CtaC;[Mycobacterium marinum] Length = 367 Score = 544 bits (1402), Expect = e-153 Identities = 258/312 (82%), Positives = 277/312 (88%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSWS+ALA+GWPEGITPEAH+NR+LW WGLIFWS FHRKK TDT Sbjct: 49 SGCSWSEALALGWPEGITPEAHVNRELWIGAVIASLVVGVIVWGLIFWSATFHRKKKTDT 108 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 + PRQFGYNMPLELVLTVTPFLIIS+LFYFTV+VQ+KML+LA DPEVV+DVTAFQWNWKF Sbjct: 109 DFPRQFGYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHLADDPEVVVDVTAFQWNWKF 168 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVE 216 GYQ+VDF D TLTYDG D ARK+AM SKPEGKD HGEELVG V G NTEDR YLNFDKVE Sbjct: 169 GYQKVDFHDHTLTYDGADEARKRAMESKPEGKDEHGEELVGPVAGRNTEDRTYLNFDKVE 228 Query: 217 TLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEE 276 TLGTT+EIPVLVLPAGKRIEFQLNSADV+H+FWVP+FLFKRDVMPNP ANNSVN FQVE+ Sbjct: 229 TLGTTSEIPVLVLPAGKRIEFQLNSADVIHAFWVPEFLFKRDVMPNPAANNSVNRFQVEQ 288 Query: 277 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLA 336 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVA NDFKAYLQQRI GKTNAEALQ I QPPLA Sbjct: 289 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAANDFKAYLQQRIAGKTNAEALQAINQPPLA 348 Query: 337 VTTHPFDTRRGQ 348 +TTHPF+TRRGQ Sbjct: 349 ITTHPFETRRGQ 360 >tr|A0PTN4|A0PTN4_MYCUA Tax_Id=362242 (ctaC)SubName: Full=Transmembrane cytochrome C oxidase (Subunit II) CtaC;[Mycobacterium ulcerans] Length = 367 Score = 540 bits (1390), Expect = e-151 Identities = 256/312 (82%), Positives = 276/312 (88%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSWS+ALA+GWPEGITPEAH+NR+LW WGLIFWS FHRKK TDT Sbjct: 49 SGCSWSEALALGWPEGITPEAHVNRELWIGAVIASLVVGVIVWGLIFWSATFHRKKKTDT 108 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 + PRQFGYNMPLELVLTVTPFLIIS+LFYFTV+VQ++ML+LA DPEVV+DVTAFQWNWKF Sbjct: 109 DFPRQFGYNMPLELVLTVTPFLIISVLFYFTVVVQERMLHLADDPEVVVDVTAFQWNWKF 168 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVE 216 GYQ+VDF D TLTYDG ARK+AM SKPEGKD HGEELVG V G NTEDR YLNFDKVE Sbjct: 169 GYQKVDFHDHTLTYDGAVEARKRAMESKPEGKDEHGEELVGPVAGRNTEDRTYLNFDKVE 228 Query: 217 TLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEE 276 TLGTT+EIPVLVLPAGKRIEFQLNSADV+H+FWVP+FLFKRDVMPNP ANNSVN FQVE+ Sbjct: 229 TLGTTSEIPVLVLPAGKRIEFQLNSADVIHAFWVPEFLFKRDVMPNPAANNSVNRFQVEQ 288 Query: 277 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLA 336 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVA NDFKAYLQQRI GKTNAEALQ I QPPLA Sbjct: 289 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAANDFKAYLQQRIAGKTNAEALQAINQPPLA 348 Query: 337 VTTHPFDTRRGQ 348 +TTHPF+TRRGQ Sbjct: 349 ITTHPFETRRGQ 360 >sp|Q73YL5|COX2_MYCPA Tax_Id=1770 (ctaC)RecName: Full=Probable cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; Flags: Precursor;[Mycobacterium paratuberculosis] Length = 360 Score = 535 bits (1378), Expect = e-150 Identities = 263/360 (73%), Positives = 296/360 (82%), Gaps = 7/360 (1%) Query: 1 VTARELVCSQRVGQG-----LSRR-LRPXXXXXXXXXXXXXXSGCS-WSDALAIGWPEGI 53 +T RE SQ + QG + RR LRP SGCS W+DALA+GWP+GI Sbjct: 1 MTPREQDRSQPLSQGRFPGRVGRRVLRPLALAVTLGVLAIVLSGCSSWADALALGWPKGI 60 Query: 54 TPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLT 113 TP+AHLNR+LW +GLIFW++ FHRKK TDTELPRQFGYNMPLELVLT Sbjct: 61 TPQAHLNRELWIGAVIASLVVGAIVYGLIFWASAFHRKKATDTELPRQFGYNMPLELVLT 120 Query: 114 VTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGV 173 VTPFLIIS+LFYFTV+VQ+KML++AKDPEVV+DVTAFQWNWKFGYQ+V+FKDGTLTYDG Sbjct: 121 VTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWNWKFGYQKVNFKDGTLTYDGA 180 Query: 174 DPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGK 233 DP RKKAMVSKPEGKD+HGEE VGAVRGLNT DR YLNFDKVETLG++ EIPVLVLP GK Sbjct: 181 DPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSDEIPVLVLPTGK 240 Query: 234 RIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGT 293 RIEF L SADVVH+FWVP+FLFKRDV+PN ANNS++VFQVEEI GAFVGHCAE CGT Sbjct: 241 RIEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGAFVGHCAEFCGT 300 Query: 294 YHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ 353 YHSMMNFEVRVV+PNDFKAYLQQR+DGK+NAEALQ I Q P+AVTTHPFD++RGQL SQ Sbjct: 301 YHSMMNFEVRVVSPNDFKAYLQQRMDGKSNAEALQAIGQSPVAVTTHPFDSKRGQLAGSQ 360 >tr|A0QF07|A0QF07_MYCA1 Tax_Id=243243 SubName: Full=Cytochrome c oxidase, subunit 2; EC=1.9.3.1;[Mycobacterium avium] Length = 336 Score = 531 bits (1369), Expect = e-149 Identities = 254/335 (75%), Positives = 284/335 (84%), Gaps = 1/335 (0%) Query: 20 LRPXXXXXXXXXXXXXXSGCS-WSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXX 78 LRP SGCS W+DALA+GWP+GITP+AHLNR+LW Sbjct: 2 LRPLALAVTLGVLAIVLSGCSSWADALALGWPKGITPQAHLNRELWIGAVIASLVVGAIV 61 Query: 79 WGLIFWSTIFHRKKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLA 138 +GLIFW++ FHRKK TDTELPRQFGYNMPLELVLTVTPFLIIS+LFYFTV+VQ+KML++A Sbjct: 62 YGLIFWASAFHRKKATDTELPRQFGYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHIA 121 Query: 139 KDPEVVIDVTAFQWNWKFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGA 198 KDPEVV+DVTAFQWNWKFGYQ+V+FKDGTLTYDG DP RKKAMVSKPEGKD+HGEE VGA Sbjct: 122 KDPEVVVDVTAFQWNWKFGYQKVNFKDGTLTYDGADPERKKAMVSKPEGKDAHGEERVGA 181 Query: 199 VRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRD 258 VRGLNT DR YLNFDKVETLG++ EIPVLVLP GKRIEF L SADVVH+FWVP+FLFKRD Sbjct: 182 VRGLNTSDRTYLNFDKVETLGSSDEIPVLVLPTGKRIEFDLASADVVHTFWVPEFLFKRD 241 Query: 259 VMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRI 318 V+PN ANNS++VFQVEEI GAFVGHCAE CGTYHSMMNFEVRVV+PNDFKAYLQQR+ Sbjct: 242 VIPNAEANNSIHVFQVEEINSPGAFVGHCAEFCGTYHSMMNFEVRVVSPNDFKAYLQQRM 301 Query: 319 DGKTNAEALQVIAQPPLAVTTHPFDTRRGQLTNSQ 353 DGK+NAEALQ I Q P+AVTTHPFD++RGQL SQ Sbjct: 302 DGKSNAEALQAIGQSPVAVTTHPFDSKRGQLAGSQ 336 >tr|A0R057|A0R057_MYCS2 Tax_Id=246196 SubName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Mycobacterium smegmatis] Length = 341 Score = 488 bits (1255), Expect = e-136 Identities = 227/313 (72%), Positives = 259/313 (82%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSWSDALA+GWP GITPEA LNR+LW WGLIFW++ FHRKK TDT Sbjct: 23 SGCSWSDALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDT 82 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 ELPRQFGYNMPLEL LTV PFLIIS+LFYFTV+VQ++M++ +PEVVIDVTAFQWNWKF Sbjct: 83 ELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKF 142 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVE 216 GYQ++ F DG+ YDG DP RK+AM S+PEGKD HG E VG +RG+ EDR YLNFDK+E Sbjct: 143 GYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIE 202 Query: 217 TLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEE 276 TLGT++EIPVLVLPAGKRIEF LNSADV+H FWVP+FLFKRDV+P P ANNS NVFQV E Sbjct: 203 TLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSE 262 Query: 277 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLA 336 I +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR GKTNAEAL I QPPLA Sbjct: 263 IQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLA 322 Query: 337 VTTHPFDTRRGQL 349 +TT PF++RRG+L Sbjct: 323 ITTEPFESRRGEL 335 >tr|A1TB08|A1TB08_MYCVP Tax_Id=350058 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 344 Score = 484 bits (1245), Expect = e-135 Identities = 226/313 (72%), Positives = 260/313 (83%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSWS+ L +GWP GITPEAHLNR+LW + L+FW+ FHRKK DT Sbjct: 23 SGCSWSEVLGLGWPNGITPEAHLNRELWIGSVIAALVVGAIVYVLLFWTMAFHRKKKGDT 82 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 ELPRQFGYNMPLEL LTV PF+IIS+LFYFTV+VQ+KM++ +PEVVIDVTA+QWNWKF Sbjct: 83 ELPRQFGYNMPLELTLTVIPFIIISVLFYFTVVVQEKMVHKEDNPEVVIDVTAYQWNWKF 142 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVE 216 GYQ+VDF DGTLTYDG D ARK+AMVS+PEG DSHG + VGA+ G N EDR+YLNFDK+E Sbjct: 143 GYQKVDFADGTLTYDGEDNARKEAMVSRPEGVDSHGNDRVGAIYGKNPEDRSYLNFDKIE 202 Query: 217 TLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEE 276 TLG++TEIPVLV+PAGKRIEF++ SADV+H FWVP+FLFKRDVMPNP NNS NVFQ+ E Sbjct: 203 TLGSSTEIPVLVVPAGKRIEFEIASADVIHGFWVPEFLFKRDVMPNPEENNSDNVFQISE 262 Query: 277 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLA 336 I +TGAFVG C EMCGTYH+MMNFE+RVV PNDFKAYL QR GKTNAEAL I QPPLA Sbjct: 263 INQTGAFVGRCTEMCGTYHAMMNFELRVVEPNDFKAYLDQRSAGKTNAEALLAINQPPLA 322 Query: 337 VTTHPFDTRRGQL 349 +TT PFDTRRG+L Sbjct: 323 ITTKPFDTRRGEL 335 >tr|A4TBI6|A4TBI6_MYCGI Tax_Id=350054 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium gilvum] Length = 344 Score = 473 bits (1218), Expect = e-131 Identities = 222/313 (70%), Positives = 255/313 (81%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSWS+ L +GWP GITPEAH NR+LW + L FW+TIFHRKK TDT Sbjct: 23 SGCSWSEVLGLGWPNGITPEAHANRELWIGSVIAAFVVGGIVYVLTFWTTIFHRKKATDT 82 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 ELPRQFGYNMPLEL LTV PF+IIS+LFYFTV+VQ++ML +PEVVIDVTAFQWNWKF Sbjct: 83 ELPRQFGYNMPLELTLTVIPFIIISVLFYFTVVVQEEMLKKEPNPEVVIDVTAFQWNWKF 142 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVE 216 GYQ+V+F DGT++YDGVD RK+AM S PEG D HG E +GA+ G EDR YLNFDK+E Sbjct: 143 GYQKVEFADGTMSYDGVDNERKEAMTSAPEGADEHGIEQIGAIAGKRPEDRTYLNFDKIE 202 Query: 217 TLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEE 276 TLG++TEIPVLV+P+GKRIEFQ+ SADV+H FWVP+FLFKRDV+PNP NNS N+FQV E Sbjct: 203 TLGSSTEIPVLVVPSGKRIEFQIASADVIHGFWVPEFLFKRDVLPNPKENNSDNIFQVSE 262 Query: 277 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLA 336 I +TGAFVG C EMCGTYH+MMNFE+RVV PNDFKAYL QR GKTNAEAL+ I Q PLA Sbjct: 263 IMQTGAFVGRCTEMCGTYHAMMNFELRVVEPNDFKAYLAQREAGKTNAEALRAINQEPLA 322 Query: 337 VTTHPFDTRRGQL 349 VTT PFDTRRG+L Sbjct: 323 VTTKPFDTRRGEL 335 >tr|Q1B6S9|Q1B6S9_MYCSS Tax_Id=164756 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium sp.] Length = 352 Score = 446 bits (1148), Expect = e-123 Identities = 216/320 (67%), Positives = 254/320 (79%), Gaps = 7/320 (2%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSW++ALA+GWP+GITPEAHLNR+LW + LIFW + FHRKK +DT Sbjct: 27 SGCSWTEALALGWPKGITPEAHLNRELWIGSMIAALVVGGIVYFLIFWVSAFHRKKASDT 86 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 ELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+VQ++M+ +PEVV+DVTAFQWNWKF Sbjct: 87 ELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEQMVGKEDNPEVVVDVTAFQWNWKF 146 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKP--EGKDSHGEELV-----GAVRGLNTEDRAY 209 GY +V+F DGT+ YDGVD R A+ S+P EG + GE GA+ G N EDR+Y Sbjct: 147 GYNKVNFADGTMNYDGVDEERSAAVASRPSEEGAGAVGEPEAAHTEHGAIAGQNPEDRSY 206 Query: 210 LNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSV 269 L FD++ETLGT+ EIPVLVLP+ KR+EF++ SADV H+FWVP+FLFKRDV PNP NNS Sbjct: 207 LAFDEIETLGTSDEIPVLVLPSEKRVEFRIASADVAHAFWVPEFLFKRDVYPNPEQNNSD 266 Query: 270 NVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQV 329 NVFQV EIT+TGAFVG CAE+CGTYH+MMNFEVRVV PNDFKAYL QR+ GKTNAEAL Sbjct: 267 NVFQVSEITETGAFVGRCAELCGTYHAMMNFEVRVVPPNDFKAYLNQRMAGKTNAEALIA 326 Query: 330 IAQPPLAVTTHPFDTRRGQL 349 I QPP AVTT PFDTRRG++ Sbjct: 327 INQPPTAVTTKPFDTRRGEM 346 >tr|A3Q1R0|A3Q1R0_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium sp.] Length = 352 Score = 446 bits (1148), Expect = e-123 Identities = 216/320 (67%), Positives = 254/320 (79%), Gaps = 7/320 (2%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSW++ALA+GWP+GITPEAHLNR+LW + LIFW + FHRKK +DT Sbjct: 27 SGCSWTEALALGWPKGITPEAHLNRELWIGSMIAALVVGGIVYFLIFWVSAFHRKKASDT 86 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 ELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+VQ++M+ +PEVV+DVTAFQWNWKF Sbjct: 87 ELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEQMVGKEDNPEVVVDVTAFQWNWKF 146 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKP--EGKDSHGEELV-----GAVRGLNTEDRAY 209 GY +V+F DGT+ YDGVD R A+ S+P EG + GE GA+ G N EDR+Y Sbjct: 147 GYNKVNFADGTMNYDGVDEERSAAVASRPSEEGAGAVGEPEAAHTEHGAIAGQNPEDRSY 206 Query: 210 LNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSV 269 L FD++ETLGT+ EIPVLVLP+ KR+EF++ SADV H+FWVP+FLFKRDV PNP NNS Sbjct: 207 LAFDEIETLGTSDEIPVLVLPSEKRVEFRIASADVAHAFWVPEFLFKRDVYPNPEQNNSD 266 Query: 270 NVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQV 329 NVFQV EIT+TGAFVG CAE+CGTYH+MMNFEVRVV PNDFKAYL QR+ GKTNAEAL Sbjct: 267 NVFQVSEITETGAFVGRCAELCGTYHAMMNFEVRVVPPNDFKAYLNQRMAGKTNAEALIA 326 Query: 330 IAQPPLAVTTHPFDTRRGQL 349 I QPP AVTT PFDTRRG++ Sbjct: 327 INQPPTAVTTKPFDTRRGEM 346 >tr|A1UI96|A1UI96_MYCSK Tax_Id=189918 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium sp.] Length = 352 Score = 446 bits (1148), Expect = e-123 Identities = 216/320 (67%), Positives = 254/320 (79%), Gaps = 7/320 (2%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCSW++ALA+GWP+GITPEAHLNR+LW + LIFW + FHRKK +DT Sbjct: 27 SGCSWTEALALGWPKGITPEAHLNRELWIGSMIAALVVGGIVYFLIFWVSAFHRKKASDT 86 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 ELPRQFGYNMPLELVLTV PFLIIS+LFYFTV+VQ++M+ +PEVV+DVTAFQWNWKF Sbjct: 87 ELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEQMVGKEDNPEVVVDVTAFQWNWKF 146 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKP--EGKDSHGEELV-----GAVRGLNTEDRAY 209 GY +V+F DGT+ YDGVD R A+ S+P EG + GE GA+ G N EDR+Y Sbjct: 147 GYNKVNFADGTMNYDGVDEERSAAVASRPSEEGAGAVGEPEAAHTEHGAIAGQNPEDRSY 206 Query: 210 LNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSV 269 L FD++ETLGT+ EIPVLVLP+ KR+EF++ SADV H+FWVP+FLFKRDV PNP NNS Sbjct: 207 LAFDEIETLGTSDEIPVLVLPSEKRVEFRIASADVAHAFWVPEFLFKRDVYPNPEQNNSD 266 Query: 270 NVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQV 329 NVFQV EIT+TGAFVG CAE+CGTYH+MMNFEVRVV PNDFKAYL QR+ GKTNAEAL Sbjct: 267 NVFQVSEITETGAFVGRCAELCGTYHAMMNFEVRVVPPNDFKAYLNQRMAGKTNAEALIA 326 Query: 330 IAQPPLAVTTHPFDTRRGQL 349 I QPP AVTT PFDTRRG++ Sbjct: 327 INQPPTAVTTKPFDTRRGEM 346 >tr|B1MNZ2|B1MNZ2_MYCA9 Tax_Id=561007 SubName: Full=Probable cytochrome c oxidase subunit 2;[Mycobacterium abscessus] Length = 349 Score = 444 bits (1141), Expect = e-122 Identities = 214/314 (68%), Positives = 245/314 (78%), Gaps = 1/314 (0%) Query: 37 SGCSWSDALAIGWPEGITPEAH-LNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTD 95 SGCS + L GWPEGITPEAH LW WGL FW+ FHR K D Sbjct: 26 SGCSVQEVLRFGWPEGITPEAHDYMAPLWTWAVVASLVVGVIVWGLTFWTVAFHRHKPGD 85 Query: 96 TELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWK 155 TE PRQFGYN+PLELVLTV PFLII++LFYFTV+VQ+K+++ +PEVV+DVTAFQWNWK Sbjct: 86 TEFPRQFGYNLPLELVLTVVPFLIIAVLFYFTVVVQNKVMHKDPNPEVVVDVTAFQWNWK 145 Query: 156 FGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKV 215 FGYQ+V FKDG+L Y+G DP RKKAM SKPEGKD+HG ELVG VRGLN EDR YLNFDK+ Sbjct: 146 FGYQKVAFKDGSLNYEGADPERKKAMTSKPEGKDAHGNELVGPVRGLNREDRTYLNFDKI 205 Query: 216 ETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVE 275 ET+GT++EIPVLV+P+GK IEFQL SADV+HSF V FLF RDVMP P ANNS NVFQV Sbjct: 206 ETVGTSSEIPVLVVPSGKSIEFQLASADVIHSFRVVPFLFTRDVMPEPKANNSDNVFQVS 265 Query: 276 EITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPL 335 +I K GAFVG C EMCGTYHSMM FE+RVV+PNDFK YL+ R DGK+NAEAL I Q P+ Sbjct: 266 KILKEGAFVGRCVEMCGTYHSMMAFELRVVSPNDFKFYLKARQDGKSNAEALASIGQSPV 325 Query: 336 AVTTHPFDTRRGQL 349 ++TT PFD RRG L Sbjct: 326 SITTRPFDGRRGDL 339 >tr|C1A125|C1A125_RHOE4 Tax_Id=234621 (ctaC)SubName: Full=Cytochrome c oxidase subunit II; EC=1.9.3.1;[Rhodococcus erythropolis] Length = 354 Score = 366 bits (939), Expect = 3e-99 Identities = 174/317 (54%), Positives = 229/317 (72%), Gaps = 7/317 (2%) Query: 37 SGCSW-SDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTD 95 SGCS ++ L GWP GITPEA R+LW WGL+FW+ IFHRKK Sbjct: 26 SGCSIDNEVLRFGWPSGITPEATRMRELWTWSVVAALVMGVLVWGLVFWAVIFHRKKKDS 85 Query: 96 TELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWK 155 E PRQ YN+PLEL T PF+II++LFYFTVIVQ+ +L +P+VV+DVTAFQWNWK Sbjct: 86 PEFPRQTAYNVPLELGYTAVPFVIIAVLFYFTVIVQNHVLDKTDNPDVVVDVTAFQWNWK 145 Query: 156 FGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKV 215 FGY+ ++F DG+ Y+G+D ++A ++ + HGEE+ G + G +TED +YL++DK+ Sbjct: 146 FGYRSIEFGDGSAKYNGIDVEAEEAAKAEGSTVNDHGEEVPGPIHGNSTEDLSYLHYDKI 205 Query: 216 ETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVE 275 ET+G++ EIP+LVLP GKRI+F+L S+DV+H+FWVP+FLFKRDV+PNP N+S N+FQ+ Sbjct: 206 ETVGSSQEIPILVLPTGKRIQFELASSDVIHAFWVPEFLFKRDVLPNPKENHSDNIFQIS 265 Query: 276 EITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQR---IDGK---TNAEALQV 329 EI K GAFVG CAEMCGT+H+MMNFEVR V+P DF Y++ R +GK T AEALQ Sbjct: 266 EIEKEGAFVGRCAEMCGTFHAMMNFEVRAVSPEDFAKYIELRKGDAEGKGGLTTAEALQA 325 Query: 330 IAQPPLAVTTHPFDTRR 346 I Q P+A +T PF+T R Sbjct: 326 IGQSPVATSTTPFNTDR 342 >tr|C3JJA0|C3JJA0_RHOER Tax_Id=596309 SubName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Rhodococcus erythropolis SK121] Length = 352 Score = 366 bits (939), Expect = 3e-99 Identities = 174/317 (54%), Positives = 229/317 (72%), Gaps = 7/317 (2%) Query: 37 SGCSW-SDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTD 95 SGCS ++ L GWP GITPEA R+LW WGL+FW+ IFHRKK Sbjct: 24 SGCSIDNEVLRFGWPSGITPEATRMRELWTWSVVAALVMGVLVWGLVFWAVIFHRKKKDS 83 Query: 96 TELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWK 155 E PRQ YN+PLEL T PF+II++LFYFTVIVQ+ +L +P+VV+DVTAFQWNWK Sbjct: 84 PEFPRQTAYNVPLELGYTAVPFVIIAVLFYFTVIVQNHVLDKTDNPDVVVDVTAFQWNWK 143 Query: 156 FGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKV 215 FGY+ ++F DG+ Y+G+D ++A ++ + HGEE+ G + G +TED +YL++DK+ Sbjct: 144 FGYRSIEFGDGSAKYNGIDVEAEEAAKTEGSTVNEHGEEVPGPIHGNSTEDLSYLHYDKI 203 Query: 216 ETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVE 275 ET+G++ EIP+LVLP GKRI+F+L S+DV+H+FWVP+FLFKRDV+PNP N+S N+FQ+ Sbjct: 204 ETVGSSQEIPILVLPTGKRIQFELASSDVIHAFWVPEFLFKRDVLPNPKENHSDNIFQIS 263 Query: 276 EITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQR---IDGK---TNAEALQV 329 EI K GAFVG CAEMCGT+H+MMNFEVR V+P DF Y++ R +GK T AEALQ Sbjct: 264 EIEKEGAFVGRCAEMCGTFHAMMNFEVRAVSPEDFAKYIELRKGDAEGKGGLTTAEALQA 323 Query: 330 IAQPPLAVTTHPFDTRR 346 I Q P+A +T PF+T R Sbjct: 324 IGQSPVATSTTPFNTDR 340 >sp|Q5YZ37|COX2_NOCFA Tax_Id=37329 (ctaC)RecName: Full=Probable cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2;[Nocardia farcinica] Length = 375 Score = 361 bits (926), Expect = 8e-98 Identities = 178/317 (56%), Positives = 220/317 (69%), Gaps = 7/317 (2%) Query: 37 SGCSWSDA-LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTD 95 SGCS + L GWP G+TP+A R+LW WGL FW+ +FHRKK Sbjct: 48 SGCSIDNVWLRFGWPSGVTPQATRMRELWTWSIIAALAMGVLVWGLTFWTVVFHRKKKDS 107 Query: 96 TELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWK 155 E PRQ GYN+PLEL T PF+II++LFYFTV+VQ+ + DP+V +DVTAFQWNWK Sbjct: 108 PEFPRQTGYNVPLELTYTAIPFVIIAVLFYFTVVVQNYVHEKVADPDVTVDVTAFQWNWK 167 Query: 156 FGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDS-----HGEELVGAVRGLNTED-RAY 209 FGY+ VDFKDG ++G+D AR++A ++ + + HG G V G D +Y Sbjct: 168 FGYREVDFKDGGYQFNGIDTAREEAAQAQLKEYEERVDTEHGHPQPGPVHGKPENDILSY 227 Query: 210 LNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSV 269 L++D VET+GT+TEIPVLVLP GK IEFQL +ADV+H+FWVP+FLFKRDVMPNP N+S Sbjct: 228 LHYDTVETVGTSTEIPVLVLPTGKVIEFQLAAADVIHAFWVPEFLFKRDVMPNPKENHSD 287 Query: 270 NVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQV 329 NVFQ+ EI K GAFVG CAEMCGTYHSMMNFEVR V+P F YL +R GKTNAEAL Sbjct: 288 NVFQITEIEKEGAFVGRCAEMCGTYHSMMNFEVRAVSPEKFTRYLDERRAGKTNAEALAA 347 Query: 330 IAQPPLAVTTHPFDTRR 346 I + P+A +T PF+T R Sbjct: 348 IGESPVATSTRPFNTDR 364 >tr|Q0SHM2|Q0SHM2_RHOSR Tax_Id=101510 SubName: Full=Probable cytochrome c oxidase subunit II; EC=1.9.3.1;[Rhodococcus sp.] Length = 355 Score = 348 bits (894), Expect = 4e-94 Identities = 170/320 (53%), Positives = 216/320 (67%), Gaps = 9/320 (2%) Query: 37 SGCSW-SDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTD 95 SGCS ++ L GWP G+TP+AH R+LW WGL FW+ IFHRKK Sbjct: 26 SGCSIDNEVLRFGWPSGVTPQAHRMRELWTWSVIAALVMGVLVWGLTFWAVIFHRKKKDS 85 Query: 96 TELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWK 155 E PRQ YN+PLEL T PF+II++LFYFTVIVQ+ +L +P VV+DVTA+QWNWK Sbjct: 86 PEFPRQTAYNVPLELAYTAVPFVIIAVLFYFTVIVQNHVLEKEDNPNVVVDVTAYQWNWK 145 Query: 156 FGYQRVDFKDGTLTYDGVDPARKKAMVSKP--EGKDSHGEELVGAVRGLNTEDRAYLNFD 213 FGY+ +D +G YDGVD + A+ S P E K G + G +D +YL++D Sbjct: 146 FGYRSIDLGEGGGKYDGVDQEAQAAVESAPASEAKAEGEHAQPGPIHGKTPQDLSYLHYD 205 Query: 214 KVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQ 273 K+ET+G++ EIP+LVLP GKRI+F+L SADV+H+FWVP+FLFKRDV PNP N+S NVFQ Sbjct: 206 KIETIGSSNEIPILVLPTGKRIQFELASADVIHAFWVPEFLFKRDVNPNPKENHSDNVFQ 265 Query: 274 VEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGK------TNAEAL 327 + EI K GAFVG CAEMCGT+H+MMNFEVR V+P+ F Y++ R T AEAL Sbjct: 266 ISEIEKEGAFVGRCAEMCGTFHAMMNFEVRAVSPDKFAQYIELRKPASEGGRDLTTAEAL 325 Query: 328 QVIAQPPLAVTTHPFDTRRG 347 Q I + P+A +T PF T RG Sbjct: 326 QAIGESPVATSTSPFTTDRG 345 >tr|C1AUA4|C1AUA4_RHOOB Tax_Id=632772 (ctaC)SubName: Full=Cytochrome c oxidase subunit II; EC=1.9.3.1;[Rhodococcus opacus] Length = 367 Score = 348 bits (894), Expect = 4e-94 Identities = 169/320 (52%), Positives = 219/320 (68%), Gaps = 9/320 (2%) Query: 37 SGCSW-SDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTD 95 SGCS ++ L GWP G+TP+AH R+LW WGL FW+ IFHRKK Sbjct: 38 SGCSIDNEVLRFGWPSGVTPQAHRMRELWTWSVIAALVMGVLVWGLTFWAVIFHRKKKDS 97 Query: 96 TELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWK 155 E PRQ YN+PLEL T PF+II++LFYFTV+VQ+ +L +P VV+DVTA+QWNWK Sbjct: 98 PEFPRQTAYNVPLELAYTAVPFVIIAVLFYFTVVVQNHVLEKEDNPNVVVDVTAYQWNWK 157 Query: 156 FGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGK-DSHGEELV-GAVRGLNTEDRAYLNFD 213 FGY+ +D +G YDGVD + A+ S P + ++ GE G + G +D +YL++D Sbjct: 158 FGYRSIDLGEGGGKYDGVDQEAQAAVESAPASEAEAEGEHAQPGPIHGKTPQDLSYLHYD 217 Query: 214 KVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQ 273 K+ET+G++ EIP+LVLP GKRI+F+L SADV+H+FWVP+FLFKRDV PNP N+S NVFQ Sbjct: 218 KIETIGSSNEIPILVLPTGKRIQFELASADVIHAFWVPEFLFKRDVNPNPKENHSDNVFQ 277 Query: 274 VEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGK------TNAEAL 327 + EI K GAFVG CAEMCGT+H+MMNFEVR V+P+ F Y++ R T AEAL Sbjct: 278 ISEIEKEGAFVGRCAEMCGTFHAMMNFEVRAVSPDKFAQYIELRKPASEGGRDLTTAEAL 337 Query: 328 QVIAQPPLAVTTHPFDTRRG 347 Q I + P+A +T PF T RG Sbjct: 338 QAIGESPVATSTSPFTTDRG 357 >tr|D0LAX5|D0LAX5_9ACTO Tax_Id=526226 SubName: Full=Cytochrome c oxidase subunit II;[Gordonia bronchialis DSM 43247] Length = 398 Score = 336 bits (861), Expect = 3e-90 Identities = 170/315 (53%), Positives = 207/315 (65%), Gaps = 5/315 (1%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 +GC DA+ GWPEGITPEA LW W LIFW+ FHR Sbjct: 58 TGCDARDAMRFGWPEGITPEAKQMGDLWTWSVIAALIMGILVWALIFWTISFHRANDEKK 117 Query: 97 EL-PRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWK 155 + PRQ YN+PLEL T PF+II++LFYFTVIVQ+ + D +VV+DVTAFQWNWK Sbjct: 118 GVFPRQTAYNVPLELTYTAIPFIIIAVLFYFTVIVQNDVESKNNDSKVVVDVTAFQWNWK 177 Query: 156 FGYQRVDFKDGTLTYDGVDPA--RKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFD 213 FGY+ V F DGT Y+G P E + HGEEL G + + R YL FD Sbjct: 178 FGYRSVIFDDGTPRYEGAQPGVGEGNPFAGPQEREMHHGEELPFPAGGRDDDIRTYLRFD 237 Query: 214 KVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQ 273 K+ET+G+++EIP+LVLP GKRIEF L +ADV+HSFWVP+FLFKRDV+P P N++ NVFQ Sbjct: 238 KIETIGSSSEIPILVLPTGKRIEFNLAAADVIHSFWVPEFLFKRDVLPFPEQNHTDNVFQ 297 Query: 274 VEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYL--QQRIDGKTNAEALQVIA 331 + I + GAFVG CAEMCGTYHSMMNFEVR V+P F AY+ + R TNA+AL+ I Sbjct: 298 ISSIDREGAFVGRCAEMCGTYHSMMNFEVRAVSPQAFDAYIKFRDRNPQATNAQALEAIC 357 Query: 332 QPPLAVTTHPFDTRR 346 Q P +VTT PFDTRR Sbjct: 358 QEPKSVTTVPFDTRR 372 >tr|C2ASW1|C2ASW1_TSUPA Tax_Id=521096 RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Tsukamurella paurometabola DSM 20162] Length = 347 Score = 310 bits (794), Expect = 2e-82 Identities = 166/329 (50%), Positives = 200/329 (60%), Gaps = 13/329 (3%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 SGCS + + GWPEG+TPEA LW W L FW+ FHRKK Sbjct: 13 SGCSADEVMRFGWPEGVTPEAREMTTLWSWSVVAALAMGVLVWALTFWTITFHRKKADSP 72 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 + PRQ YN+PLEL+ T PFLII++LFYFTVIVQ K+ L +P V +DVTAFQWNW+F Sbjct: 73 DFPRQTAYNVPLELLYTAVPFLIIAVLFYFTVIVQTKVEKLEDNPAVTVDVTAFQWNWRF 132 Query: 157 GYQRV--DFKDGTLTYD-------GVDPARKKAMVSKPEGKDSHGEELVGAVRGLN---- 203 Y+ + + KDG G P KK + K GE RG N Sbjct: 133 AYREITENGKDGGTPIKLERPNPYGQQPDLKKLNEEAAKEKAETGEIEHQPERGPNHGRF 192 Query: 204 TEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNP 263 E R YL F VE G++ EIPVLVLP G RIEF L SADVVHSF+VP+F FKRDVMPNP Sbjct: 193 QEIRDYLKFSTVEVQGSSAEIPVLVLPTGARIEFVLASADVVHSFYVPQFAFKRDVMPNP 252 Query: 264 VANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTN 323 N+S N FQ+ EI ++G FVG CAEMCG YHSMMNFE+R V+P F Y++ R DGK N Sbjct: 253 KENHSQNRFQITEIERSGDFVGRCAEMCGDYHSMMNFEIRAVSPEKFTQYIKARQDGKDN 312 Query: 324 AEALQVIAQPPLAVTTHPFDTRRGQLTNS 352 A AL+ I + ++ +T PFDTRR T S Sbjct: 313 ATALESIGESGVSTSTAPFDTRRTGRTAS 341 >tr|C2GKI0|C2GKI0_9CORY Tax_Id=548478 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium glucuronolyticum ATCC 51866] Length = 368 Score = 301 bits (772), Expect = 6e-80 Identities = 159/322 (49%), Positives = 203/322 (63%), Gaps = 20/322 (6%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHR----KKTTDTELPR 100 L +GWPEGITPEA W W L+ W+ F+ KK ELP+ Sbjct: 30 LRMGWPEGITPEATEVGNFWVWVWVTAWTIGIIMWALMLWNVFFNTAKRAKKAGKGELPK 89 Query: 101 QFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQR 160 Q YN+PLE+VLT+ P I+S+LF+FTV QD++ L K+P+V +D+T FQWNWKFGY Sbjct: 90 QLQYNIPLEIVLTIIPITIVSVLFFFTVQAQDQVNALDKNPKVTVDITGFQWNWKFGYAN 149 Query: 161 V--DFKDGTLTYDGVDPARKKAMVSKPEGKDS----------HGEELV--GAVRGLNTED 206 V D Y G D AR KA +D+ +GEE G V G + +D Sbjct: 150 VAADLSPTGQDYVGTDEARTKAAEESAYERDADGNIKTKHLPNGEEYQWGGPVHGKSRDD 209 Query: 207 RAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVAN 266 R+YL+F+K+ET+G + E+PVLVLP+ +EF+L SADV HSFWVP+FLFKRDV NP AN Sbjct: 210 RSYLHFNKIETVGASNEVPVLVLPSQTPLEFRLASADVSHSFWVPEFLFKRDVYANPEAN 269 Query: 267 NSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNA 324 NSVN FQ+E+I + GAFVG CAEMCGTYH+MMNFEVRVV+P FK YL+ R N+ Sbjct: 270 NSVNRFQIEKIEEEGAFVGRCAEMCGTYHAMMNFEVRVVSPEKFKQYLEYRTANPEAPNS 329 Query: 325 EALQVIAQPPLAVTTHPFDTRR 346 EAL+ I + P + +T PF T R Sbjct: 330 EALKAIGEDPYSTSTRPFLTER 351 >tr|C0VV07|C0VV07_9CORY Tax_Id=548477 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium glucuronolyticum ATCC 51867] Length = 368 Score = 301 bits (772), Expect = 6e-80 Identities = 159/322 (49%), Positives = 203/322 (63%), Gaps = 20/322 (6%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHR----KKTTDTELPR 100 L +GWPEGITPEA W W L+ W+ F+ KK ELP+ Sbjct: 30 LRMGWPEGITPEATEVGNFWVWVWVTAWTIGIIMWALMLWNVFFNTAKRAKKAGKGELPK 89 Query: 101 QFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQR 160 Q YN+PLE+VLT+ P I+S+LF+FTV QD++ L K+P+V +D+T FQWNWKFGY Sbjct: 90 QLQYNIPLEIVLTIIPITIVSVLFFFTVQAQDQVNALDKNPKVTVDITGFQWNWKFGYAN 149 Query: 161 V--DFKDGTLTYDGVDPARKKAMVSKPEGKDS----------HGEELV--GAVRGLNTED 206 V D Y G D AR KA +D+ +GEE G V G + +D Sbjct: 150 VAADLSPTGQDYVGTDEARTKAAEESAYERDADGNIKTKHLPNGEEYQWGGPVHGKSRDD 209 Query: 207 RAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVAN 266 R+YL+F+K+ET+G + E+PVLVLP+ +EF+L SADV HSFWVP+FLFKRDV NP AN Sbjct: 210 RSYLHFNKIETVGASNEVPVLVLPSQTPLEFRLASADVSHSFWVPEFLFKRDVYANPEAN 269 Query: 267 NSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNA 324 NSVN FQ+E+I + GAFVG CAEMCGTYH+MMNFEVRVV+P FK YL+ R N+ Sbjct: 270 NSVNRFQIEKIEEEGAFVGRCAEMCGTYHAMMNFEVRVVSPEKFKQYLEYRTANPEAPNS 329 Query: 325 EALQVIAQPPLAVTTHPFDTRR 346 EAL+ I + P + +T PF T R Sbjct: 330 EALKAIGEDPYSTSTRPFLTER 351 >tr|C6RAZ9|C6RAZ9_9CORY Tax_Id=553206 SubName: Full=Putative cytochrome C oxidase, subunit II;[Corynebacterium tuberculostearicum SK141] Length = 357 Score = 300 bits (769), Expect = 1e-79 Identities = 162/309 (52%), Positives = 195/309 (63%), Gaps = 12/309 (3%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFH-----RKKTTDTELP 99 L GWP+GITPEA W WGL F + IF KK E P Sbjct: 41 LGFGWPKGITPEAEAMYNFWIWVWVAAWIVGFIMWGL-FLTAIFRWSAKKAKKDGKGEFP 99 Query: 100 RQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQ 159 RQ YN+PLE+VLT+ P LII LF+FTV Q K+ L KDP+VV+DVTAFQWNWKFGY Sbjct: 100 RQIQYNVPLEMVLTIVPILIIMGLFFFTVQTQQKVTALDKDPKVVVDVTAFQWNWKFGYA 159 Query: 160 RVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLG 219 + +G YDG D R+ ++ D G + + G + D +YLN++K+ET+G Sbjct: 160 E-NHVNGE-NYDGADKERQAE--AEKTAHDPEGVDNPNPIHGKSMGDLSYLNYNKIETVG 215 Query: 220 TTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITK 279 TT E+PVLVLP+ IEF+L S DV H+FWVP+FLFKRDV +P AN FQVE+I K Sbjct: 216 TTEEVPVLVLPSDTAIEFRLASGDVSHAFWVPEFLFKRDVYAHPEANAQERSFQVEKIEK 275 Query: 280 TGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQPPLAV 337 GAFVG CAEMCGTYHSMMNFE+RVV+P DF YL+ R D TNAEAL+ I Q P AV Sbjct: 276 QGAFVGRCAEMCGTYHSMMNFEIRVVSPEDFNTYLKFREDNPDATNAEALEEIGQDPYAV 335 Query: 338 TTHPFDTRR 346 TTHPF R Sbjct: 336 TTHPFSGER 344 >tr|C2BNF6|C2BNF6_9CORY Tax_Id=525264 (ctaC)SubName: Full=Cytochrome C oxidase; EC=1.9.3.1;[Corynebacterium pseudogenitalium ATCC 33035] Length = 357 Score = 300 bits (769), Expect = 1e-79 Identities = 162/309 (52%), Positives = 195/309 (63%), Gaps = 12/309 (3%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFH-----RKKTTDTELP 99 L GWP+GITPEA W WGL F + IF KK E P Sbjct: 41 LGFGWPKGITPEAEAMYNFWIWVWVAAWIVGFIMWGL-FLTAIFRWSAKKAKKDGKGEFP 99 Query: 100 RQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQ 159 RQ YN+PLE+VLT+ P LII LF+FTV Q K+ L KDP+VV+DVTAFQWNWKFGY Sbjct: 100 RQIQYNVPLEMVLTIVPILIIMGLFFFTVQTQQKVTALDKDPKVVVDVTAFQWNWKFGYA 159 Query: 160 RVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLG 219 + +G YDG D R+ ++ D G + + G + D +YLN++K+ET+G Sbjct: 160 E-NHVNGE-NYDGADKERQAE--AEKTAHDPEGVDNPNPIHGKSMGDLSYLNYNKIETVG 215 Query: 220 TTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITK 279 TT E+PVLVLP+ IEF+L S DV H+FWVP+FLFKRDV +P AN FQVE+I K Sbjct: 216 TTEEVPVLVLPSDTAIEFRLASGDVSHAFWVPEFLFKRDVYAHPEANAQERSFQVEKIEK 275 Query: 280 TGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQPPLAV 337 GAFVG CAEMCGTYHSMMNFE+RVV+P DF YL+ R D TNAEAL+ I Q P AV Sbjct: 276 QGAFVGRCAEMCGTYHSMMNFEIRVVSPEDFNTYLKFREDNPEATNAEALEEIGQDPYAV 335 Query: 338 TTHPFDTRR 346 TTHPF R Sbjct: 336 TTHPFSGER 344 >tr|C8RRE5|C8RRE5_CORJE Tax_Id=525262 (ctaC)SubName: Full=Cytochrome c oxidase, subunit II; EC=1.9.3.1;[Corynebacterium jeikeium ATCC 43734] Length = 326 Score = 300 bits (768), Expect = 2e-79 Identities = 159/310 (51%), Positives = 205/310 (66%), Gaps = 10/310 (3%) Query: 47 IGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFW----STIFHRKKTTDTELPRQF 102 +GWP+GITPE+ LW W L+F S+ +K + E PRQ Sbjct: 1 MGWPKGITPESKEMGNLWVWVWVVAWIIGLIMWVLLFVNMGRSSAKKAEKRGEDEFPRQT 60 Query: 103 GYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVD 162 GYN+PLELVLT P LI+ LF+F V QD+ L KDP+VV+DVT +QWNWKFGY V Sbjct: 61 GYNVPLELVLTTLPVLIVCGLFFFNVQAQDRATALDKDPKVVVDVTGYQWNWKFGYHEVA 120 Query: 163 FK-DGTLTYDGVDP-ARKKAMVSK-PEGK-DSHGEELVGAVRGLNTEDRAYLNFDKVETL 218 + +G Y GVD A+ +A SK PE K D HG ++ G + G + +D +YLN++K+ET+ Sbjct: 121 AELNGGQEYKGVDKEAQARAEESKKPEEKLDKHGHQVPGPIHGKSKDDLSYLNYNKIETV 180 Query: 219 GTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEIT 278 GTT EIPVLV+P+G IEF L SADVVHSFW+P+FLFKRDV P+P N S FQVE I Sbjct: 181 GTTQEIPVLVVPSGTPIEFNLASADVVHSFWIPEFLFKRDVFPHPSENRSERRFQVESID 240 Query: 279 KTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQPPLA 336 + GAFVG CAEMCGTYH+MMNFE+RVV+P F+ Y++ R D N+EAL+ I + A Sbjct: 241 EEGAFVGRCAEMCGTYHAMMNFELRVVSPEKFEQYIKFRQDNPEAPNSEALKAIGEEGYA 300 Query: 337 VTTHPFDTRR 346 +THPF++ R Sbjct: 301 TSTHPFESDR 310 >tr|Q4JWC9|Q4JWC9_CORJK Tax_Id=306537 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; Flags: Precursor;[Corynebacterium jeikeium] Length = 369 Score = 300 bits (767), Expect = 2e-79 Identities = 168/354 (47%), Positives = 220/354 (62%), Gaps = 20/354 (5%) Query: 10 QRVGQGLSRRLRPXXXXXXXXXXXXXXSGCS-------WSDALAIGWPEGITPEAHLNRQ 62 QR GL+RR+ SGC+ + + L +GWP+GITPE+ Sbjct: 3 QRNKHGLTRRI---GLAGVLGLAGLVLSGCTVAPPENGFFNFLRMGWPKGITPESKEMGN 59 Query: 63 LWXXXXXXXXXXXXXXWGLIFW----STIFHRKKTTDTELPRQFGYNMPLELVLTVTPFL 118 LW W L+F S+ +K + E PRQ GYN+PLELVLT P L Sbjct: 60 LWVWVWVVAWIIGLIMWVLLFVNMGRSSAKKAEKRGEDEFPRQTGYNVPLELVLTTLPVL 119 Query: 119 IISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVDFK-DGTLTYDGVDP-A 176 I+ LF+F V QD+ L KDP+VV+DVT +QWNWKFGY V + +G Y GVD A Sbjct: 120 IVCGLFFFNVQAQDRATALDKDPKVVVDVTGYQWNWKFGYHEVAAELNGGQEYKGVDKEA 179 Query: 177 RKKAMVSK-PEGK-DSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTTEIPVLVLPAGKR 234 + +A SK PE K D HG ++ G + G + +D +YLN++K+ET+GTT EIPVLV+P+G Sbjct: 180 QARAEESKKPEEKLDKHGHQVPGPIHGKSKDDLSYLNYNKIETVGTTQEIPVLVVPSGTP 239 Query: 235 IEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGAFVGHCAEMCGTY 294 IEF L SADVVHSFW+P+FLFKRDV P+P N S FQVE I + GAFVG CAEMCGTY Sbjct: 240 IEFNLASADVVHSFWIPEFLFKRDVFPHPSENRSERRFQVESIDEEGAFVGRCAEMCGTY 299 Query: 295 HSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQPPLAVTTHPFDTRR 346 H+MM+FE+RVV+P F+ Y++ R D N+EAL+ I + A +THPF++ R Sbjct: 300 HAMMSFELRVVSPEKFEQYIKFRQDNPEAPNSEALKAIGEEGYATSTHPFESDR 353 >tr|C4LI14|C4LI14_CORK4 Tax_Id=645127 SubName: Full=Cytochrome c oxidase subunit II; EC=1.9.3.1;[Corynebacterium kroppenstedtii] Length = 371 Score = 298 bits (763), Expect = 7e-79 Identities = 160/322 (49%), Positives = 205/322 (63%), Gaps = 16/322 (4%) Query: 37 SGCS-------WSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFH 89 SGCS + L G P+GITPEA W WGL+F+S+ Sbjct: 27 SGCSVAPPDNGFFKLLRFGVPDGITPEAKEIGNFWVWIWVAAWIVGIIMWGLMFYSSFAF 86 Query: 90 R----KKTTDTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVI 145 R +K + E PRQ YN+PLELVLT P +I+ ++F+FTV +DK+ + KDP+V + Sbjct: 87 RAKRKEKKGEKEFPRQTQYNIPLELVLTTVPIIIVMVIFFFTVQTEDKVTAMDKDPKVKV 146 Query: 146 DVTAFQWNWKFGYQRVDFK-DGTLTYDGVDP-ARKKAMVSKPEGKDSHGEE-LVGAVRGL 202 DVTAFQWNWKFGY VD G TY+G D A+ A +K S GEE + G Sbjct: 147 DVTAFQWNWKFGYNEVDGSLMGGNTYEGRDDSAQAAADGTKKIESSSRGEEGASNPIHGN 206 Query: 203 NTEDRAYLNFDKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPN 262 + D +YLNFDK+ET+GTT E+PVLVLP+ I+F L SADV+HSFWVP+FLFKRD P+ Sbjct: 207 SKSDLSYLNFDKIETVGTTDEVPVLVLPSQTAIQFDLASADVIHSFWVPEFLFKRDAFPH 266 Query: 263 PVANNSVNVFQVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRID--G 320 P AN S FQ+E+I K GAFVG CAEMCGTYH+MMNFE+RVV+P+ F+ Y+ R D Sbjct: 267 PEANKSNRKFQIEKIDKEGAFVGRCAEMCGTYHAMMNFEIRVVSPDKFRDYMNFRKDNPS 326 Query: 321 KTNAEALQVIAQPPLAVTTHPF 342 +NA+AL+ I + P A +THPF Sbjct: 327 ASNADALKAIGEQPYATSTHPF 348 >tr|C0WK65|C0WK65_9CORY Tax_Id=525260 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium accolens ATCC 49725] Length = 357 Score = 296 bits (757), Expect = 3e-78 Identities = 157/311 (50%), Positives = 198/311 (63%), Gaps = 16/311 (5%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFH-----RKKTTDTELP 99 L GWP+G+TPEA W WGL F + IF K+ E P Sbjct: 41 LGFGWPKGVTPEAEAMYNFWIWVWVAAWIVGFVMWGL-FLTAIFRWSAKKAKRDGKGEFP 99 Query: 100 RQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGY- 158 RQ YN+PLE+VLT+ P LII LF+FTV Q K+ L KDP+V +DVTAFQWNWKFGY Sbjct: 100 RQTQYNVPLEMVLTIVPILIIMTLFFFTVQTQQKVTALDKDPKVTVDVTAFQWNWKFGYA 159 Query: 159 -QRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVET 217 RV+ ++ Y+G D AR+ ++ D G + + G + D +YLN++K+ET Sbjct: 160 ENRVNGEN----YNGADEARQAE--AEKTAHDPEGVDNPNPIHGKSKGDLSYLNYNKIET 213 Query: 218 LGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEI 277 +G+T E+PVLVLP+ IEF+L SADV H+FWVP+FLFKRDV +P AN FQ+E I Sbjct: 214 VGSTEEVPVLVLPSDTAIEFRLASADVSHAFWVPEFLFKRDVYAHPEANAQERSFQIESI 273 Query: 278 TKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYL--QQRIDGKTNAEALQVIAQPPL 335 K GAFVG CAEMCGTYHSMMNFE+RVV+P DF AY+ +++ TNAEAL+ I Q P Sbjct: 274 DKQGAFVGRCAEMCGTYHSMMNFEIRVVSPEDFNAYMDFREKNPNATNAEALKEIGQDPY 333 Query: 336 AVTTHPFDTRR 346 AVTTHPF R Sbjct: 334 AVTTHPFSGER 344 >tr|A4QFR0|A4QFR0_CORGB Tax_Id=340322 RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium glutamicum] Length = 359 Score = 293 bits (751), Expect = 2e-77 Identities = 160/324 (49%), Positives = 200/324 (61%), Gaps = 20/324 (6%) Query: 43 DALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIF-----HRKKTTDTE 97 D L +GWP+GITPEA W WGL F + IF +K + E Sbjct: 40 DFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGL-FLTAIFAWGAKRAEKRGEGE 98 Query: 98 LPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFG 157 P+Q YN+PLELVLT+ P +I+ +LF+FTV QDK+ L K+PEV +DVTA+QWNWKFG Sbjct: 99 FPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFG 158 Query: 158 YQRVD--FKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKV 215 Y +D G Y G DP R+ ++ KD G+ + G + D +YL F+++ Sbjct: 159 YSEIDGSLAPGGQDYQGTDPERQAT--AEASKKDPSGDN---PIHGNSKSDVSYLEFNRI 213 Query: 216 ETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVE 275 ETLGTT EIPV+VLPA IEF L SADV HSFWVP+FLFKRD +P AN S VFQ+E Sbjct: 214 ETLGTTDEIPVMVLPANTPIEFNLASADVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIE 273 Query: 276 EITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQP 333 EIT+ GAFVG CAEMCGTYH+MMNFE+RVV + F Y+ R TNA+AL+ I Q Sbjct: 274 EITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPDATNAQALEHIGQA 333 Query: 334 PLAVTTHPF-----DTRRGQLTNS 352 P A +T PF TR G+ T S Sbjct: 334 PYATSTSPFVSDRTATRDGENTQS 357 >sp|Q8NNK2|COX2_CORGL Tax_Id=1718 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; AltName: Full=Oxidase aa(3) subunit 2; Flags: Precursor;[Corynebacterium glutamicum] Length = 359 Score = 293 bits (749), Expect = 3e-77 Identities = 160/324 (49%), Positives = 200/324 (61%), Gaps = 20/324 (6%) Query: 43 DALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIF-----HRKKTTDTE 97 D L +GWP+GITPEA W WGL F + IF +K + E Sbjct: 40 DFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGL-FLTAIFAWGAKRAEKRGEGE 98 Query: 98 LPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFG 157 P+Q YN+PLELVLT+ P +I+ +LF+FTV QDK+ L K+PEV +DVTA+QWNWKFG Sbjct: 99 FPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFG 158 Query: 158 YQRVD--FKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKV 215 Y +D G Y G DP R+ A ++ KD G+ + G + D +YL F+++ Sbjct: 159 YSEIDGSLAPGGQDYQGSDPERQAA--AEASKKDPSGDN---PIHGNSKSDVSYLEFNRI 213 Query: 216 ETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVE 275 ETLGTT EIPV+VLP IEF L SADV HSFWVP+FLFKRD +P AN S VFQ+E Sbjct: 214 ETLGTTDEIPVMVLPVNTPIEFNLASADVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIE 273 Query: 276 EITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQP 333 EIT+ GAFVG CAEMCGTYH+MMNFE+RVV + F Y+ R TNA+AL+ I Q Sbjct: 274 EITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPDATNAQALEHIGQA 333 Query: 334 PLAVTTHPF-----DTRRGQLTNS 352 P A +T PF TR G+ T S Sbjct: 334 PYATSTSPFVSDRTATRDGENTQS 357 >tr|B1VHF8|B1VHF8_CORU7 Tax_Id=504474 SubName: Full=Cytochrome c oxidase subunit II; EC=1.9.3.1;[Corynebacterium urealyticum] Length = 367 Score = 292 bits (748), Expect = 4e-77 Identities = 155/314 (49%), Positives = 203/314 (64%), Gaps = 14/314 (4%) Query: 44 ALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIF-----WSTIFHRKKTTDTEL 98 AL +GWP GITPEA W W L+F +S+ ++ + E Sbjct: 41 ALRMGWPMGITPEAEQMGNYWVWVWVTAWIIGIIMWALMFFVMGRYSSKARSRRGDNEEF 100 Query: 99 PRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGY 158 PRQ GYN+PLELVLT P LI+ +LF+F V QD + L KDP+V +DVT +QWNWKFGY Sbjct: 101 PRQTGYNVPLELVLTTVPVLIVMVLFFFNVQTQDSVTALDKDPKVKVDVTGYQWNWKFGY 160 Query: 159 QRVDFKD-GTLTYDGVDP-ARKKAMVSKPE--GKDSHGEELVGAVRGLNTEDRAYLNFDK 214 ++ + G Y+GVD A+++A SK E +HG VG + G + ED +YLNF+K Sbjct: 161 GEINGELLGGQDYEGVDKEAQQRAEDSKYEIRSNTNHG---VGPIHGRSKEDYSYLNFNK 217 Query: 215 VETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQV 274 +ET+G+T E+PVLV+P+ IEF L SADV HSFW+P+FLFKRDV P+P AN S FQ+ Sbjct: 218 IETVGSTDEVPVLVVPSNTAIEFNLASADVAHSFWIPEFLFKRDVFPHPEANQSERRFQI 277 Query: 275 EEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQ 332 EI + GAFVG CAEMCGTYHSMMNFE+RVV+P F Y++ R D N+EAL+ I + Sbjct: 278 SEIKEEGAFVGRCAEMCGTYHSMMNFELRVVSPEKFADYIKFRQDNPEAPNSEALKSIGE 337 Query: 333 PPLAVTTHPFDTRR 346 P + +THPF + R Sbjct: 338 APYSTSTHPFVSDR 351 >tr|C2CNF2|C2CNF2_CORST Tax_Id=525268 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium striatum ATCC 6940] Length = 358 Score = 288 bits (738), Expect = 5e-76 Identities = 155/309 (50%), Positives = 196/309 (63%), Gaps = 12/309 (3%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFH-----RKKTTDTELP 99 L GWP+GITPEA W WGL F IF+ +K E P Sbjct: 41 LGFGWPKGITPEAESMYNFWIWVWVAAWIIGFIMWGL-FLIAIFNWNAKKAEKDGKGEFP 99 Query: 100 RQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQ 159 +Q YN+PLE+VLT+ P LII LF+FTV Q K+ L K+PEV +DVTA+QWNWKFGY Sbjct: 100 KQLQYNVPLEMVLTIVPILIIMGLFFFTVQAQQKVTALDKNPEVTVDVTAYQWNWKFGY- 158 Query: 160 RVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLG 219 + K Y+G D RKK +++ D G + + G + D +YLNF+K+ET+G Sbjct: 159 -AENKVDGQNYNGEDVERKK--LAEESAIDPEGVKNPNPIHGKSMGDLSYLNFNKIETVG 215 Query: 220 TTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITK 279 TT E+PVLVLP+G IEF+L S DV HSFWVP+FLFKRD +P AN FQ+EEI + Sbjct: 216 TTEEVPVLVLPSGTPIEFRLASGDVSHSFWVPEFLFKRDAYAHPEANAQERRFQIEEIAE 275 Query: 280 TGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYL--QQRIDGKTNAEALQVIAQPPLAV 337 GAFVG CAEMCGTYH+MMNFE+RVV+ DF YL +++ TNAEAL+ I Q P AV Sbjct: 276 EGAFVGRCAEMCGTYHAMMNFEIRVVSREDFNKYLTFREQNPEATNAEALEHIGQEPYAV 335 Query: 338 TTHPFDTRR 346 TT PF+++R Sbjct: 336 TTSPFNSQR 344 >sp|Q6NG98|COX2_CORDI Tax_Id=1717 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; AltName: Full=Oxidase aa(3) subunit 2; Flags: Precursor;[Corynebacterium diphtheriae] Length = 362 Score = 284 bits (726), Expect = 1e-74 Identities = 147/311 (47%), Positives = 190/311 (61%), Gaps = 11/311 (3%) Query: 44 ALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIF----HRKKTTDTELP 99 AL GWP+GITPEA W WGL + KK E P Sbjct: 41 ALGFGWPKGITPEATSMYNFWVWVWVTAWIIGFIMWGLFIYGMFSWSAKRAKKAGKDEFP 100 Query: 100 RQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQ 159 RQ YN+PLELVLT+ P +I+ LF+FTV QDK+ + KDP+V +DVT +QWNWKFGY Sbjct: 101 RQTQYNIPLELVLTIVPIIIVMALFFFTVQTQDKVTAMDKDPKVTVDVTGYQWNWKFGYA 160 Query: 160 RV--DFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVET 217 +V + Y G D R++A + K G + + G + D +YL+F+K+ET Sbjct: 161 KVAGELSPTGSDYVGTDEKRQEAA---EKTKFDQGGDNPNPINGRSKTDTSYLHFNKIET 217 Query: 218 LGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEI 277 LGT+ EIPVLVLP+ +EF L SADV H+FWVP+FLFKRD +P N FQ+E+I Sbjct: 218 LGTSEEIPVLVLPSNTPVEFDLASADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKI 277 Query: 278 TKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQPPL 335 K GAFVG CAEMCGTYH+MMNFE+RVV+P F YL+ R D TN++AL+ I + P Sbjct: 278 EKEGAFVGRCAEMCGTYHAMMNFEIRVVSPEKFAQYLKFRNDNPQATNSDALKSIGEAPY 337 Query: 336 AVTTHPFDTRR 346 A +THPF++ R Sbjct: 338 ATSTHPFNSER 348 >tr|C0XRX5|C0XRX5_9CORY Tax_Id=525263 (ctaC)SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Corynebacterium lipophiloflavum DSM 44291] Length = 364 Score = 283 bits (725), Expect = 2e-74 Identities = 152/316 (48%), Positives = 193/316 (61%), Gaps = 16/316 (5%) Query: 42 SDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIF-----WSTIFHRKKTTDT 96 ++ L +GWP+ ITPE W W L W+ KKT D Sbjct: 38 ANVLDMGWPDPITPEGVQMYNFWVWVWVAAWTIGIIMWALFLVAVFKWNAKAQAKKTDD- 96 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 E P+Q YN+PLEL LT+ P +I+ +LF+FTV Q K + L KDPEV +DVTAFQWNWKF Sbjct: 97 EFPKQLQYNVPLELGLTIVPIIIVFVLFFFTVQAQTKAVALDKDPEVTVDVTAFQWNWKF 156 Query: 157 GYQRV--DFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGA--VRGLNTEDRAYLNF 212 GY ++ + Y+G D R+ + E EEL A + G +T D +YLN+ Sbjct: 157 GYAQIGEELSPTGQLYNGADEQRQ----ALAEDTKYEAEELPNANPIHGTSTGDMSYLNY 212 Query: 213 DKVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVF 272 + +ET GTT EIPVLVLP IEF+L S DV H+FWVP+FLFKRDV +P +N F Sbjct: 213 NVIETTGTTDEIPVLVLPTETPIEFRLASGDVSHAFWVPEFLFKRDVYAHPESNQQQRSF 272 Query: 273 QVEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVI 330 Q+E I + GAFVG CAEMCGTYH+MMNFEVR V+P DF+AY+Q R D TNA+AL+ I Sbjct: 273 QIERIDREGAFVGRCAEMCGTYHAMMNFEVRAVSPEDFRAYIQFRNDNPDATNAQALESI 332 Query: 331 AQPPLAVTTHPFDTRR 346 Q P A TT PF++ R Sbjct: 333 GQDPYATTTRPFNSDR 348 >tr|C5VDB4|C5VDB4_9CORY Tax_Id=553207 RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium matruchotii ATCC 14266] Length = 356 Score = 283 bits (723), Expect = 3e-74 Identities = 150/310 (48%), Positives = 193/310 (62%), Gaps = 13/310 (4%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIF----HRKKTTDTELPR 100 L +GWP+GITPEA W WGL + KK E PR Sbjct: 38 LGMGWPKGITPEATAMYNFWEWVWVVAWTIGFIMWGLFIYGMFAWSAKRAKKAGKDEFPR 97 Query: 101 QFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQR 160 Q YN+PLELVLT+ P +I+ LF+FTV Q+K+ L KDP+V +DVTA+QWNWKFGYQ+ Sbjct: 98 QTQYNIPLELVLTIFPIIIVMGLFFFTVQTQEKVTALDKDPKVTVDVTAYQWNWKFGYQK 157 Query: 161 V--DFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETL 218 V + Y G D R+K +++ D +G+ + G + D +YL+F+K+ETL Sbjct: 158 VAPELTADGQEYVGTDEERQK--LAEESKVDPNGKN---PINGRSKSDVSYLHFNKIETL 212 Query: 219 GTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEIT 278 GTT E+PVLVLP+ IEFQL SADV HSFWVP+FLFKRD +P N FQVE+I Sbjct: 213 GTTQEVPVLVLPSNTPIEFQLASADVSHSFWVPEFLFKRDTYNHPEENKQERRFQVEKIE 272 Query: 279 KTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRID--GKTNAEALQVIAQPPLA 336 K GAFVG CAEMCGTYH+MMNFE+RVV+P F YL+ R +NA+AL+ I +P A Sbjct: 273 KEGAFVGRCAEMCGTYHAMMNFELRVVSPEKFTQYLEYRKQNPNASNADALESIGEPGYA 332 Query: 337 VTTHPFDTRR 346 +T PF++ R Sbjct: 333 TSTEPFNSNR 342 >tr|C0E4J1|C0E4J1_9CORY Tax_Id=566549 RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium matruchotii ATCC 33806] Length = 356 Score = 283 bits (723), Expect = 3e-74 Identities = 150/310 (48%), Positives = 193/310 (62%), Gaps = 13/310 (4%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIF----HRKKTTDTELPR 100 L +GWP+GITPEA W WGL + KK E PR Sbjct: 38 LGMGWPKGITPEATAMYNFWEWVWVVAWTIGFIMWGLFIYGMFAWSAKRAKKAGKDEFPR 97 Query: 101 QFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQR 160 Q YN+PLELVLT+ P +I+ LF+FTV Q+K+ L KDP+V +DVTA+QWNWKFGYQ+ Sbjct: 98 QTQYNIPLELVLTIFPIIIVMGLFFFTVQTQEKVTALDKDPKVTVDVTAYQWNWKFGYQK 157 Query: 161 V--DFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETL 218 V + Y G D R+K +++ D +G+ + G + D +YL+F+K+ETL Sbjct: 158 VAPELTADGQEYVGTDEQRQK--LAEESKVDPNGKN---PINGRSKSDVSYLHFNKIETL 212 Query: 219 GTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEIT 278 GTT E+PVLVLP+ IEFQL SADV HSFWVP+FLFKRD +P N FQVE+I Sbjct: 213 GTTQEVPVLVLPSNTPIEFQLASADVSHSFWVPEFLFKRDTYNHPEENKQERRFQVEKIE 272 Query: 279 KTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRID--GKTNAEALQVIAQPPLA 336 K GAFVG CAEMCGTYH+MMNFE+RVV+P F YL+ R +NA+AL+ I +P A Sbjct: 273 KEGAFVGRCAEMCGTYHAMMNFELRVVSPEKFTQYLEYRKQNPNASNADALESIGEPGYA 332 Query: 337 VTTHPFDTRR 346 +T PF++ R Sbjct: 333 TSTEPFNSNR 342 >tr|C3PHJ0|C3PHJ0_CORA7 Tax_Id=548476 (ctaC)SubName: Full=Cytochrome c oxidase subunit II; EC=1.9.3.1;[Corynebacterium aurimucosum] Length = 376 Score = 281 bits (719), Expect = 8e-74 Identities = 153/311 (49%), Positives = 195/311 (62%), Gaps = 16/311 (5%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFH-----RKKTTDTELP 99 L +GWP+G+TPEA W WGL F + IF +K E P Sbjct: 58 LGMGWPKGVTPEATSMYNFWIWVWVAAWIIGFIMWGL-FLTAIFRWNAKKAEKAGKGEFP 116 Query: 100 RQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGY- 158 +Q YN+PLE+ LT+ P LII LF+FTV Q K+ L K+PEV +DVTAFQWNWKFGY Sbjct: 117 KQLQYNVPLEMALTIIPILIIMGLFFFTVQAQQKVTALDKNPEVTVDVTAFQWNWKFGYA 176 Query: 159 -QRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVET 217 +VD ++ YDG D R+K +++ D G + + G + D +YLNF+K+ET Sbjct: 177 ENKVDGEN----YDGADAERQK--LAEESSIDPEGTDNPNPIHGKSMGDISYLNFNKIET 230 Query: 218 LGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEI 277 +GTT E+PVLVLP IEF+L S DV HSFWVP+FLFKRD +P N+ FQVE+I Sbjct: 231 VGTTEEVPVLVLPVDTPIEFRLASGDVSHSFWVPEFLFKRDAYAHPENNSQERRFQVEKI 290 Query: 278 TKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQPPL 335 + GAFVG CAEMCGTYH+MMNFE+RVV DF YL+ R + TNAEAL+ I + P Sbjct: 291 EEKGAFVGRCAEMCGTYHAMMNFEIRVVDRADFNEYLKFREENPQATNAEALEHIGEEPY 350 Query: 336 AVTTHPFDTRR 346 AVTT PF++ R Sbjct: 351 AVTTAPFNSLR 361 >sp|Q8FNQ7|COX2_COREF Tax_Id=152794 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; AltName: Full=Oxidase aa(3) subunit 2; Flags: Precursor;[Corynebacterium efficiens] Length = 359 Score = 275 bits (702), Expect = 8e-72 Identities = 151/315 (47%), Positives = 194/315 (61%), Gaps = 19/315 (6%) Query: 43 DALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGL----IFWSTIFHRKKTTDTEL 98 D L +GWP GITPEA W WGL IF +K + E Sbjct: 40 DFLRMGWPSGITPEAVSMGNFWSWVWVAAWIIGIIMWGLMLTAIFSWNAKKAEKRGEGEF 99 Query: 99 PRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGY 158 P+Q YN+PLELVLT+ P +I+ +LF+FTV QD++ L K+PEV ++VTA+QWNWKFGY Sbjct: 100 PKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDRVTALDKNPEVTVNVTAYQWNWKFGY 159 Query: 159 QRV--DFKDGTLTYDGVDPARK-KAMVSK--PEGKDSHGEELVGAVRGLNTEDRAYLNFD 213 + +F YDGVD AR+ A SK P G + + G + +D +YL+F+ Sbjct: 160 GELAPEFAPAGGDYDGVDEARQASAEASKIDPSGNNP--------IHGNSKKDMSYLHFN 211 Query: 214 KVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQ 273 ++ETLGTT E+PVLVLP IEF L SADV HSFWVP+FLFKRD+ +P AN S VFQ Sbjct: 212 QIETLGTTDEVPVLVLPTNTPIEFNLASADVAHSFWVPEFLFKRDLYAHPEANKSQRVFQ 271 Query: 274 VEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQR--IDGKTNAEALQVIA 331 ++EI + GAFVG CAEMCGTYH+MMNFE+R V F Y+ R TNA+AL+ I Sbjct: 272 IDEIFEEGAFVGRCAEMCGTYHAMMNFELRTVDRETFAEYIAFRDANPDATNAQALEHIG 331 Query: 332 QPPLAVTTHPFDTRR 346 + P A +T PF + R Sbjct: 332 EAPYATSTAPFVSDR 346 >tr|C8NQ48|C8NQ48_COREF Tax_Id=196164 (ctaC)SubName: Full=Cytochrome c oxidase, subunit II; EC=1.9.3.1;[Corynebacterium efficiens YS-314] Length = 323 Score = 275 bits (702), Expect = 8e-72 Identities = 151/315 (47%), Positives = 194/315 (61%), Gaps = 19/315 (6%) Query: 43 DALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGL----IFWSTIFHRKKTTDTEL 98 D L +GWP GITPEA W WGL IF +K + E Sbjct: 4 DFLRMGWPSGITPEAVSMGNFWSWVWVAAWIIGIIMWGLMLTAIFSWNAKKAEKRGEGEF 63 Query: 99 PRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGY 158 P+Q YN+PLELVLT+ P +I+ +LF+FTV QD++ L K+PEV ++VTA+QWNWKFGY Sbjct: 64 PKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDRVTALDKNPEVTVNVTAYQWNWKFGY 123 Query: 159 QRV--DFKDGTLTYDGVDPARK-KAMVSK--PEGKDSHGEELVGAVRGLNTEDRAYLNFD 213 + +F YDGVD AR+ A SK P G + + G + +D +YL+F+ Sbjct: 124 GELAPEFAPAGGDYDGVDEARQASAEASKIDPSGNNP--------IHGNSKKDMSYLHFN 175 Query: 214 KVETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQ 273 ++ETLGTT E+PVLVLP IEF L SADV HSFWVP+FLFKRD+ +P AN S VFQ Sbjct: 176 QIETLGTTDEVPVLVLPTNTPIEFNLASADVAHSFWVPEFLFKRDLYAHPEANKSQRVFQ 235 Query: 274 VEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQR--IDGKTNAEALQVIA 331 ++EI + GAFVG CAEMCGTYH+MMNFE+R V F Y+ R TNA+AL+ I Sbjct: 236 IDEIFEEGAFVGRCAEMCGTYHAMMNFELRTVDRETFAEYIAFRDANPDATNAQALEHIG 295 Query: 332 QPPLAVTTHPFDTRR 346 + P A +T PF + R Sbjct: 296 EAPYATSTAPFVSDR 310 >tr|C8NTI2|C8NTI2_9CORY Tax_Id=585529 (ctaC)SubName: Full=Cytochrome c oxidase, subunit II; EC=1.9.3.1;[Corynebacterium genitalium ATCC 33030] Length = 363 Score = 269 bits (688), Expect = 3e-70 Identities = 136/310 (43%), Positives = 189/310 (60%), Gaps = 10/310 (3%) Query: 45 LAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIF----HRKKTTDTELPR 100 L +GWP+ +TPE W W + ++ R+K E P+ Sbjct: 41 LDMGWPDPVTPEGASMYNFWVWVWLVAWIIGIIMWAIFIYAVFAWNSKRRQKQGHGEFPK 100 Query: 101 QFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQR 160 Q YN+PLEL LT+ P LI+ +LF+FTV Q K++ L K+P+V +DVTAFQWNWKFGY Sbjct: 101 QLQYNIPLELALTIVPILIVMVLFFFTVQAQTKVVALDKEPDVTVDVTAFQWNWKFGYAE 160 Query: 161 V--DFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETL 218 V D YDG D R+K ++ D + G ++ D++YLN++ +ET+ Sbjct: 161 VKGDLSPVGGDYDGSDLERQK--LADETKIDDENMVNGNPIHGQSSNDQSYLNYNLIETV 218 Query: 219 GTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEIT 278 G+T E+PVLVLP IEF+L S+DV H+FWVP+FLFKRD +P N FQ+EEIT Sbjct: 219 GSTEEVPVLVLPTDTAIEFRLASSDVSHAFWVPEFLFKRDAYSHPEMNQQERSFQIEEIT 278 Query: 279 KTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDG--KTNAEALQVIAQPPLA 336 +TG+FVG CAEMCGTYH+MMNFE+R V P+ F+ Y+ R + +N+EAL+ I + P A Sbjct: 279 ETGSFVGRCAEMCGTYHAMMNFEIRAVTPDQFREYMDFRHNNPEASNSEALEAIGEEPFA 338 Query: 337 VTTHPFDTRR 346 +T PF++ R Sbjct: 339 TSTRPFNSDR 348 >tr|C6W9F6|C6W9F6_ACTMD Tax_Id=446462 RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Actinosynnema mirum] Length = 311 Score = 255 bits (651), Expect = 7e-66 Identities = 139/321 (43%), Positives = 182/321 (56%), Gaps = 58/321 (18%) Query: 37 SGCSWSDALAIGWPEGITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTTDT 96 +GCS + L GWP +TP+A R+LW WGLI W+ FHRKK+ Sbjct: 27 TGCSTDEVLRFGWPVSVTPQAEAMRELWTWSVVAALVVGVIVWGLILWAVAFHRKKSE-- 84 Query: 97 ELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKF 156 ELPRQ YN+PLELVL V P +I+++LFYFT + Q+ + ++DP+V +DV FQWNW+F Sbjct: 85 ELPRQVAYNLPLELVLIVVPTVIVAVLFYFTAVTQNYVTDKSQDPDVTVDVIGFQWNWEF 144 Query: 157 GYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVE 216 ++ +K EG D V Sbjct: 145 QHRD----------------------AKVEGTDQ-----------------------PVS 159 Query: 217 TLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEE 276 T+GT+TEIP+LVLPA KR+ F L S DV+HSF+VP+F FKRDV P P NN NVFQ+++ Sbjct: 160 TVGTSTEIPMLVLPAEKRVRFVLRSTDVIHSFFVPEFHFKRDVFPEPEKNNQDNVFQIDQ 219 Query: 277 ITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRID-----GK--TNAEALQV 329 I + G+FVG CAE+CGTYH++MNFEVR + D+ Y++ R GK TNAEAL Sbjct: 220 IDRPGSFVGRCAELCGTYHAVMNFEVRALPAADYDRYIELRTQVNEATGKPYTNAEALTE 279 Query: 330 I----AQPPLAVTTHPFDTRR 346 + P AVTT PFDT R Sbjct: 280 MNCGELCTPYAVTTQPFDTDR 300 >tr|C4RLQ6|C4RLQ6_9ACTO Tax_Id=219305 RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Micromonospora sp. ATCC 39149] Length = 323 Score = 238 bits (606), Expect = 1e-60 Identities = 127/312 (40%), Positives = 173/312 (55%), Gaps = 53/312 (16%) Query: 37 SGCSWSDALA-IGWPEG-ITPEAHLNRQLWXXXXXXXXXXXXXXWGLIFWSTIFHRKKTT 94 +GC A GWP+G ITPE+H LW WGLIFW + +RK+ Sbjct: 47 TGCDVGKTFAGFGWPQGGITPESHRMYDLWIASCIAALAVGVFVWGLIFWCVVRYRKR-- 104 Query: 95 DTELPRQFGYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNW 154 ELP Q YN+P+E + T+ P LI+S+LFY+T +VQ ++ K+P+V ++V AF+WNW Sbjct: 105 GNELPVQTRYNLPMEFLYTIAPILIVSVLFYYTAVVQTDVVRTTKNPDVTVEVVAFKWNW 164 Query: 155 KFGYQRVDFKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDK 214 +F Y +DG +GKD++ V Sbjct: 165 QFNY-----RDG-------------------QGKDANTVASV------------------ 182 Query: 215 VETLGTTTEIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQV 274 LGT+ IP+LVLP G+ I F+ S DV+HSFWVP+ LFKRDVMP + N VF+V Sbjct: 183 ---LGTSEVIPILVLPTGRSIRFEETSKDVIHSFWVPELLFKRDVMPGSIRN----VFEV 235 Query: 275 EEITKTGAFVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPP 334 + GA+VG CAE+CG+YH+ MNFE+RVV+P + +L + DGK+ EAL I + P Sbjct: 236 SSLDAEGAYVGRCAELCGSYHAFMNFELRVVSPQQYDQFLAAKRDGKSTQEALTAIGEDP 295 Query: 335 LAVTTHPFDTRR 346 A TT PF TRR Sbjct: 296 YATTTEPFKTRR 307 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.321 0.137 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 2,410,735,948 Number of extensions: 93828048 Number of successful extensions: 222169 Number of sequences better than 10.0: 14708 Number of HSP's gapped: 207980 Number of HSP's successfully gapped: 15077 Length of query: 353 Length of database: 3,808,957,724 Length adjustment: 138 Effective length of query: 215 Effective length of database: 2,269,800,392 Effective search space: 488007084280 Effective search space used: 488007084280 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 81 (35.8 bits)