BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML0987
         (711 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|P35901|RECA_MYCLE Tax_Id=1769 (recA)RecName: Full=Protein rec...  1353   0.0  
tr|B8ZQT5|B8ZQT5_MYCLB Tax_Id=561304 (recA)RecName: Full=Protein...  1353   0.0  
tr|C2AAI7|C2AAI7_THECU Tax_Id=471852 RecName: Full=Protein recA;...  1003   0.0  
tr|Q47RS6|Q47RS6_THEFY Tax_Id=269800 SubName: Full=DNA recombina...   773   0.0  
sp|Q9F410|RECA_MYCSH Tax_Id=29313 (recA)RecName: Full=Protein re...   754   0.0  
sp|Q9F415|RECA_MYCFV Tax_Id=1776 (recA)RecName: Full=Protein rec...   733   0.0  
sp|Q9F417|RECA_MYCCI Tax_Id=1792 (recA)RecName: Full=Protein rec...   721   0.0  
sp|Q9F416|RECA_MYCFA Tax_Id=1793 (recA)RecName: Full=Protein rec...   712   0.0  
sp|Q9F407|RECA_MYCTH Tax_Id=1797 (recA)RecName: Full=Protein rec...   701   0.0  
sp|Q9F414|RECA_MYCGS Tax_Id=1777 (recA)RecName: Full=Protein rec...   564   e-158
sp|P0A5U4|RECA_MYCTU Tax_Id=1773 (recA)RecName: Full=Protein rec...   361   2e-97
sp|P0A5U5|RECA_MYCBO Tax_Id=1765 (recA)RecName: Full=Protein rec...   361   2e-97
tr|C6DLH1|C6DLH1_MYCTK Tax_Id=478434 RecName: Full=Protein recA;...   361   2e-97
tr|C1AFJ6|C1AFJ6_MYCBT Tax_Id=561275 (recA)RecName: Full=Protein...   361   2e-97
tr|A5U689|A5U689_MYCTA Tax_Id=419947 (recA)RecName: Full=Protein...   361   2e-97
tr|A1KM75|A1KM75_MYCBP Tax_Id=410289 (recA)RecName: Full=Protein...   361   2e-97
tr|A5WQY8|A5WQY8_MYCTF Tax_Id=336982 RecName: Full=Protein recA;...   361   2e-97
tr|A4KK14|A4KK14_MYCTU Tax_Id=395095 RecName: Full=Protein recA;...   361   2e-97
tr|A2VL74|A2VL74_MYCTU Tax_Id=348776 RecName: Full=Protein recA;...   361   2e-97
tr|Q6J4N5|Q6J4N5_MYCIT Tax_Id=1767 (recA)RecName: Full=Protein r...   351   2e-94
tr|A1XM11|A1XM11_9MYCO Tax_Id=35617 (recA)RecName: Full=Protein ...   351   2e-94
sp|P62219|RECA_MYCPA Tax_Id=1770 (recA)RecName: Full=Protein rec...   349   6e-94
sp|A0QIR6|RECA_MYCA1 Tax_Id=243243 (recA)RecName: Full=Protein r...   349   6e-94
tr|Q6J4L8|Q6J4L8_MYCGS Tax_Id=1777 (recA)RecName: Full=Protein r...   349   6e-94
tr|Q6J4L7|Q6J4L7_MYCKA Tax_Id=1768 (recA)RecName: Full=Protein r...   349   6e-94
sp|B2HL06|RECA_MYCMM Tax_Id=216594 (recA)RecName: Full=Protein r...   348   1e-93
tr|Q6J4M4|Q6J4M4_MYCMR Tax_Id=1781 (recA)RecName: Full=Protein r...   348   1e-93
tr|Q6J4M6|Q6J4M6_MYCGO Tax_Id=1778 (recA)RecName: Full=Protein r...   348   2e-93
sp|A0PT89|RECA_MYCUA Tax_Id=362242 (recA)RecName: Full=Protein r...   347   3e-93
tr|Q6J4M1|Q6J4M1_MYCSZ Tax_Id=1787 (recA)RecName: Full=Protein r...   347   4e-93
tr|Q6J4M7|Q6J4M7_MYCGO Tax_Id=1778 (recA)RecName: Full=Protein r...   346   5e-93
tr|Q6J4N3|Q6J4N3_MYCAV Tax_Id=1764 (recA)RecName: Full=Protein r...   345   9e-93
tr|Q6J4L4|Q6J4L4_9MYCO Tax_Id=1798 (recA)RecName: Full=Protein r...   345   9e-93
tr|Q6J4M2|Q6J4M2_MYCSZ Tax_Id=1787 (recA)RecName: Full=Protein r...   345   1e-92
tr|Q6J4L6|Q6J4L6_MYCSH Tax_Id=29313 (recA)RecName: Full=Protein ...   345   1e-92
tr|Q7X428|Q7X428_9MYCO Tax_Id=230710 (recA)RecName: Full=Protein...   345   2e-92
tr|Q5QJ34|Q5QJ34_9MYCO Tax_Id=146021 (recA)RecName: Full=Protein...   345   2e-92
tr|Q5QJ32|Q5QJ32_9MYCO Tax_Id=1802 (recA)RecName: Full=Protein r...   345   2e-92
tr|Q5QJ27|Q5QJ27_9MYCO Tax_Id=1796 (recA)RecName: Full=Protein r...   345   2e-92
tr|Q5QJ17|Q5QJ17_9MYCO Tax_Id=59750 (recA)RecName: Full=Protein ...   345   2e-92
tr|Q7X427|Q7X427_9MYCO Tax_Id=230710 (recA)RecName: Full=Protein...   344   2e-92
tr|Q6J4N1|Q6J4N1_9MYCO Tax_Id=279273 (recA)RecName: Full=Protein...   344   2e-92
tr|Q6J4M8|Q6J4M8_MYCSI Tax_Id=1784 (recA)RecName: Full=Protein r...   344   2e-92
tr|Q6J4M0|Q6J4M0_MYCNO Tax_Id=1782 (recA)RecName: Full=Protein r...   344   2e-92
tr|Q6J4L9|Q6J4L9_MYCNO Tax_Id=1782 (recA)RecName: Full=Protein r...   344   2e-92
tr|Q6J4L5|Q6J4L5_9MYCO Tax_Id=1788 (recA)RecName: Full=Protein r...   344   2e-92
tr|Q5QJ25|Q5QJ25_9MYCO Tax_Id=83262 (recA)RecName: Full=Protein ...   344   2e-92
tr|Q7X424|Q7X424_9MYCO Tax_Id=1794 (recA)RecName: Full=Protein r...   344   3e-92
tr|Q6J4M3|Q6J4M3_MYCXE Tax_Id=1789 (recA)RecName: Full=Protein r...   344   3e-92
tr|A4Z8B7|A4Z8B7_9MYCO Tax_Id=1794 RecName: Full=Protein recA; F...   344   3e-92

>sp|P35901|RECA_MYCLE Tax_Id=1769 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName: Full=Mle
           recA intein;[Mycobacterium leprae]
          Length = 711

 Score = 1353 bits (3502), Expect = 0.0
 Identities = 689/711 (96%), Positives = 689/711 (96%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           RIVEIYGPESSGKTTVALH             FIDAEHALEPEYAKKLGVDTDSLLVSQP
Sbjct: 61  RIVEIYGPESSGKTTVALHAVANAQAVGGVAAFIDAEHALEPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDP 240
           GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDP
Sbjct: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDP 240

Query: 241 VTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIA 300
           VTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIA
Sbjct: 241 VTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIA 300

Query: 301 GDRVLAVEPHMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKA 360
           GDRVLAVEPHMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKA
Sbjct: 301 GDRVLAVEPHMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKA 360

Query: 361 LMGNIRHTVRENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWY 420
           LMGNIRHTVRENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWY
Sbjct: 361 LMGNIRHTVRENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWY 420

Query: 421 MDDGSFTVGSKRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAG 480
           MDDGSFTVGSKRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAG
Sbjct: 421 MDDGSFTVGSKRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAG 480

Query: 481 KAVLVFSTAATAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVH 540
           KAVLVFSTAATAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVH
Sbjct: 481 KAVLVFSTAATAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVH 540

Query: 541 VKLSTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG 600
           VKLSTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG
Sbjct: 541 VKLSTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG 600

Query: 601 VDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYE 660
           VDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYE
Sbjct: 601 VDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYE 660

Query: 661 GEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTDDDILPTPVDF 711
           GEQLGQGKENARNFLLENADVAN         LGIGAVVTDDDILPTPVDF
Sbjct: 661 GEQLGQGKENARNFLLENADVANEIEKKIKEKLGIGAVVTDDDILPTPVDF 711


>tr|B8ZQT5|B8ZQT5_MYCLB Tax_Id=561304 (recA)RecName: Full=Protein
           recA;[Mycobacterium leprae]
          Length = 711

 Score = 1353 bits (3502), Expect = 0.0
 Identities = 689/711 (96%), Positives = 689/711 (96%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           RIVEIYGPESSGKTTVALH             FIDAEHALEPEYAKKLGVDTDSLLVSQP
Sbjct: 61  RIVEIYGPESSGKTTVALHAVANAQAVGGVAAFIDAEHALEPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDP 240
           GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDP
Sbjct: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDP 240

Query: 241 VTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIA 300
           VTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIA
Sbjct: 241 VTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIA 300

Query: 301 GDRVLAVEPHMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKA 360
           GDRVLAVEPHMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKA
Sbjct: 301 GDRVLAVEPHMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKA 360

Query: 361 LMGNIRHTVRENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWY 420
           LMGNIRHTVRENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWY
Sbjct: 361 LMGNIRHTVRENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWY 420

Query: 421 MDDGSFTVGSKRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAG 480
           MDDGSFTVGSKRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAG
Sbjct: 421 MDDGSFTVGSKRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAG 480

Query: 481 KAVLVFSTAATAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVH 540
           KAVLVFSTAATAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVH
Sbjct: 481 KAVLVFSTAATAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVH 540

Query: 541 VKLSTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG 600
           VKLSTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG
Sbjct: 541 VKLSTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG 600

Query: 601 VDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYE 660
           VDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYE
Sbjct: 601 VDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYE 660

Query: 661 GEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTDDDILPTPVDF 711
           GEQLGQGKENARNFLLENADVAN         LGIGAVVTDDDILPTPVDF
Sbjct: 661 GEQLGQGKENARNFLLENADVANEIEKKIKEKLGIGAVVTDDDILPTPVDF 711


>tr|C2AAI7|C2AAI7_THECU Tax_Id=471852 RecName: Full=Protein
           recA;[Thermomonospora curvata DSM 43183]
          Length = 729

 Score = 1003 bits (2592), Expect = 0.0
 Identities = 503/691 (72%), Positives = 579/691 (83%), Gaps = 1/691 (0%)

Query: 6   DREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRIVEI 65
           DR+KALE A+AQIE+ +GKGSVMRLGDE   P+ VIPTGSI+LD+ALGIGGLPRGRI+EI
Sbjct: 5   DRDKALEAALAQIERQFGKGSVMRLGDEARAPVEVIPTGSISLDIALGIGGLPRGRIIEI 64

Query: 66  YGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDTGEQ 125
           YGPE SGKT++ALH             FIDAEHAL+PEYA KLGVDTD+LLVSQPDTGEQ
Sbjct: 65  YGPEGSGKTSIALHAIANVQKNGGIAAFIDAEHALDPEYAAKLGVDTDALLVSQPDTGEQ 124

Query: 126 ALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGALSN 185
           ALEIADML+RSGA+DI+V+DSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMTGA+S 
Sbjct: 125 ALEIADMLVRSGAIDIIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGAISQ 184

Query: 186 SGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRI 245
           + TTAIFINQLREKIGVMFGCM+Y TRVTLADG+ EKIGKIV+ KMDV VLSYDP  D+I
Sbjct: 185 AKTTAIFINQLREKIGVMFGCMSYGTRVTLADGTQEKIGKIVDQKMDVEVLSYDPQLDKI 244

Query: 246 VPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVL 305
           VP++VVNWF+NG AE+FLQFTV KSG NG++QFAAT NHL+RTPGG+ EAG LIAGDRV+
Sbjct: 245 VPKRVVNWFDNGNAERFLQFTVAKSGGNGRAQFAATENHLVRTPGGYREAGELIAGDRVM 304

Query: 306 AVEPHMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKALMGNI 365
            +E H LSDQQ+QVVLGS+MGDG+LSPN   R GVRFR +G+G  Q  YL WK +L+GNI
Sbjct: 305 VMETHRLSDQQWQVVLGSVMGDGSLSPNRRGRTGVRFR-MGHGAGQAAYLDWKVSLLGNI 363

Query: 366 RHTVRENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWYMDDGS 425
             T   N+ GA F DFTPLPEL EL+R VY GDGKK L+ +YLKALTPL LAIWYMDDG 
Sbjct: 364 PCTRSVNAKGAVFADFTPLPELDELRRVVYFGDGKKHLTWDYLKALTPLALAIWYMDDGH 423

Query: 426 FTVGSKRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLV 485
             V SK +Q+RTAGGSGR+EICV+A + G+R RL +YL DTHGLDVRL E G+    VL 
Sbjct: 424 LAVPSKELQDRTAGGSGRVEICVEAFSPGSRERLVEYLRDTHGLDVRLIERGARKAGVLQ 483

Query: 486 FSTAATAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLST 545
           F+TAA+AKFQ LIAPYV  SM+YKLLP+ RGR +V PQFV+P  +LVPA++LDV VK  T
Sbjct: 484 FTTAASAKFQELIAPYVHESMDYKLLPRLRGRCTVEPQFVDPEPRLVPAQILDVRVKPKT 543

Query: 546 RSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVG 605
           RSM RFDIEVEG HNYFVDGVMVHNSPETTTGG+ALKFYASVR+DVRRIETLKDG + VG
Sbjct: 544 RSMRRFDIEVEGAHNYFVDGVMVHNSPETTTGGRALKFYASVRLDVRRIETLKDGTEPVG 603

Query: 606 NRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLG 665
           NR RVK+VKNKVSPPFK A+FD+LYG+GISREG LID+GVE G VRK+G+W+TYEG+QLG
Sbjct: 604 NRVRVKVVKNKVSPPFKVADFDLLYGQGISREGGLIDLGVEHGIVRKAGAWYTYEGDQLG 663

Query: 666 QGKENARNFLLENADVANXXXXXXXXXLGIG 696
           QGKENARNFL  N D+A+         LGIG
Sbjct: 664 QGKENARNFLRSNPDIADEIEKKIKEKLGIG 694


>tr|Q47RS6|Q47RS6_THEFY Tax_Id=269800 SubName: Full=DNA recombination
            protein RecA;[Thermobifida fusca]
          Length = 1177

 Score =  773 bits (1995), Expect = 0.0
 Identities = 400/636 (62%), Positives = 477/636 (75%), Gaps = 11/636 (1%)

Query: 71   SGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDTGEQALEIA 130
            S  TTVALH             FIDAEHAL+P YA+K+GV+ D LL+SQPDTGEQALEI 
Sbjct: 515  SHNTTVALHAVANAQRAGGIAAFIDAEHALDPSYAEKIGVNIDDLLLSQPDTGEQALEIV 574

Query: 131  DMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGALSNSGTTA 190
            DML+RSGA+ I+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRK+ GAL+ + TTA
Sbjct: 575  DMLVRSGAISIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIAGALNQTKTTA 634

Query: 191  IFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKV 250
            IFINQLREK+GVMFGCM+Y T VTLADG+ EKIG IV+ K+DV VLSYDP TDRIVPR+V
Sbjct: 635  IFINQLREKVGVMFGCMHYDTLVTLADGTQEKIGTIVDRKLDVEVLSYDPETDRIVPRRV 694

Query: 251  VNWFNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPH 310
            VNWF+NG A+ FLQFTV +SG  G +QF ATPNHLIRTPGGW EAG LIAGDRVL  EPH
Sbjct: 695  VNWFDNGAADHFLQFTVGRSGKPGGAQFTATPNHLIRTPGGWREAGELIAGDRVLVHEPH 754

Query: 311  MLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKALMGNIRHTVR 370
             L++QQ QVV GSLMG G L P+     GV F  + +  +Q  YL WK +L+GNI H+  
Sbjct: 755  YLNEQQRQVVYGSLMGRGTLVPDRHGGPGVHF-CMAHTAEQAAYLDWKVSLLGNIAHSRT 813

Query: 371  ENSMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWYMDDGSFTVGS 430
              +     ++FTP+PEL EL R V  GDG   L+ E+LK LTPL LA+WY+D G+ T+  
Sbjct: 814  AEASATVGVEFTPMPELSELHRVVDFGDGHTHLTWEFLKQLTPLALAVWYLDAGTLTIPQ 873

Query: 431  KRVQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAA 490
                +       R++I V+ ++ G+R RL +YL DTH LD  + + G+  +++L F+ AA
Sbjct: 874  SGTDD-----DARVQIDVETLSPGSRQRLVEYLRDTHELDAAVVQQGADARSLLEFTPAA 928

Query: 491  TAKFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNR 550
            T +F  L+APYV  SM   LL QFRGR SVTP++ +P Q+LV A VLD+ VK    S  +
Sbjct: 929  TVRFLELVAPYVPESMSSMLLAQFRGRCSVTPEYSDPVQRLVAAPVLDIQVK--PGSTRK 986

Query: 551  FDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRV 610
            FDIEVEGNHNYFVDGVMVHNSPETT+GG+ALKFYASVRMDVRRIETLKDG +AVGNRTRV
Sbjct: 987  FDIEVEGNHNYFVDGVMVHNSPETTSGGRALKFYASVRMDVRRIETLKDGTEAVGNRTRV 1046

Query: 611  KIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKEN 670
            K+VKNK++PPFKQAEFDILYG GISREG L+D+GVE G VRKSG+W+TYEG QLGQGKEN
Sbjct: 1047 KVVKNKLAPPFKQAEFDILYGVGISREGGLLDLGVEHGIVRKSGAWYTYEGTQLGQGKEN 1106

Query: 671  ARNFLLENADVANXXXXXXXXXLGIGAVVTDDDILP 706
            ARNFL  N D+A+         LGI    T DD  P
Sbjct: 1107 ARNFLRANPDMADEIEKRIKQKLGI---PTGDDSAP 1139



 Score =  110 bits (274), Expect = 9e-22
 Identities = 53/72 (73%), Positives = 62/72 (86%)

Query: 6  DREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRIVEI 65
          DR+KALE A+AQIE+ +GKG++MRLGD+   PI  IPTGSI+LDVALGIGG+PRGRIVEI
Sbjct: 28 DRDKALETALAQIERQFGKGTIMRLGDDNRPPIESIPTGSISLDVALGIGGIPRGRIVEI 87

Query: 66 YGPESSGKTTVA 77
          YGPESSGK   A
Sbjct: 88 YGPESSGKCLTA 99


>sp|Q9F410|RECA_MYCSH Tax_Id=29313 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName: Full=Msh
           recA intein; Flags: Fragment;[Mycobacterium shimoidei]
          Length = 423

 Score =  754 bits (1946), Expect = 0.0
 Identities = 373/424 (87%), Positives = 393/424 (92%), Gaps = 1/424 (0%)

Query: 197 REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKVVNWFNN 256
           REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV+VLSYDP +DRIVPRK+VNWFNN
Sbjct: 1   REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVKVLSYDPDSDRIVPRKIVNWFNN 60

Query: 257 GPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLSDQQ 316
           GPAEQFLQFTVEKSG NGKSQFAATPNHLIRTP GWTEAG+L  GDRVLA EPH+LSDQQ
Sbjct: 61  GPAEQFLQFTVEKSGGNGKSQFAATPNHLIRTPAGWTEAGDLNTGDRVLAAEPHLLSDQQ 120

Query: 317 FQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKALMGNIRHTVRENSMGA 376
           FQVVLGSLMGDGNLSPN  DRNGVRFRL G+G KQ EYLQWK ALMGNI HTVREN+ GA
Sbjct: 121 FQVVLGSLMGDGNLSPNRRDRNGVRFRL-GHGAKQAEYLQWKTALMGNIGHTVRENAKGA 179

Query: 377 SFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWYMDDGSFTVGSKRVQER 436
           SF+DFTPLPEL ELQRAVY+GDGKKF SEEYLKALTPL LAIWYMDDGSFT+ S+ +QER
Sbjct: 180 SFVDFTPLPELAELQRAVYMGDGKKFFSEEYLKALTPLALAIWYMDDGSFTLRSRGLQER 239

Query: 437 TAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAATAKFQS 496
           TAGGSGRI ICV+AMTEGTRVRLRDYL DTHGLDVRLR  GSAGK VLVFS AATAKFQ 
Sbjct: 240 TAGGSGRIAICVEAMTEGTRVRLRDYLRDTHGLDVRLRSAGSAGKTVLVFSMAATAKFQE 299

Query: 497 LIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNRFDIEVE 556
           L+APY+APSMEYKLLP+FRGR +V PQFVEPTQ+LVPAR+LDVHVK  TRSMNRFDIEVE
Sbjct: 300 LVAPYMAPSMEYKLLPRFRGRSTVRPQFVEPTQRLVPARILDVHVKPHTRSMNRFDIEVE 359

Query: 557 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
           GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG DAVGNRTRVK+VKNK
Sbjct: 360 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNRTRVKVVKNK 419

Query: 617 VSPP 620
           VSPP
Sbjct: 420 VSPP 423


>sp|Q9F415|RECA_MYCFV Tax_Id=1776 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName: Full=Mfl
           recA intein; Flags: Fragment;[Mycobacterium flavescens]
          Length = 423

 Score =  733 bits (1893), Expect = 0.0
 Identities = 361/424 (85%), Positives = 391/424 (92%), Gaps = 1/424 (0%)

Query: 197 REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKVVNWFNN 256
           REKIGVMFGC NYSTRV LAD +TEKIGKIV  KMDV VLSYDP TDR+VPRKVVNWFNN
Sbjct: 1   REKIGVMFGCFNYSTRVQLADRTTEKIGKIVTQKMDVEVLSYDPDTDRVVPRKVVNWFNN 60

Query: 257 GPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLSDQQ 316
           GPAEQFLQFTVEKSG NGKSQFAATPNHLIRTPGGWTEAG+LIAGDRV+A EPH LSDQQ
Sbjct: 61  GPAEQFLQFTVEKSGGNGKSQFAATPNHLIRTPGGWTEAGDLIAGDRVMATEPHRLSDQQ 120

Query: 317 FQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKALMGNIRHTVRENSMGA 376
           FQVVLGSLMGDGNLSPN  DRNGVRFR+ G+G KQV+YL+WK  L+GNI+H+ R N  GA
Sbjct: 121 FQVVLGSLMGDGNLSPNRRDRNGVRFRM-GHGAKQVDYLRWKTELLGNIKHSTRVNDKGA 179

Query: 377 SFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWYMDDGSFTVGSKRVQER 436
           +F+DFTPLPEL ELQRAVYLGDGKKFLSEEYLKALTPL LAIWYMDDG+FTV SK +QER
Sbjct: 180 TFVDFTPLPELAELQRAVYLGDGKKFLSEEYLKALTPLALAIWYMDDGAFTVRSKGLQER 239

Query: 437 TAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAATAKFQS 496
           TAGGSGRIEICV+AM+EGTRVRLRDYL DTHGL+VRLR+ G AGKAVLVFSTA++AKFQ 
Sbjct: 240 TAGGSGRIEICVEAMSEGTRVRLRDYLHDTHGLEVRLRQSGKAGKAVLVFSTASSAKFQE 299

Query: 497 LIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNRFDIEVE 556
           L+APY+APSMEYKLLP+FRG+ +V+PQFVE TQ+LVPAR+LDVHVK  TRSMNRFDIEVE
Sbjct: 300 LVAPYMAPSMEYKLLPRFRGQSTVSPQFVESTQRLVPARILDVHVKPHTRSMNRFDIEVE 359

Query: 557 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
           GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG DAVGNRTRVK+VKNK
Sbjct: 360 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGXDAVGNRTRVKVVKNK 419

Query: 617 VSPP 620
           VSPP
Sbjct: 420 VSPP 423


>sp|Q9F417|RECA_MYCCI Tax_Id=1792 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName: Full=Mch
           recA intein; Flags: Fragment;[Mycobacterium chitae]
          Length = 423

 Score =  721 bits (1860), Expect = 0.0
 Identities = 352/424 (83%), Positives = 386/424 (91%), Gaps = 1/424 (0%)

Query: 197 REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKVVNWFNN 256
           REKIGVMFGC NYSTRV LADG+TEKIGKIVNNKMDV VLSYDPV D++VPRKVVNWFNN
Sbjct: 1   REKIGVMFGCFNYSTRVQLADGTTEKIGKIVNNKMDVEVLSYDPVADQVVPRKVVNWFNN 60

Query: 257 GPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLSDQQ 316
           GPAEQFLQFTVEKSG NG+SQFAATPNHLIRTP GW+EAG+LIAGDRV+A EPH LSDQQ
Sbjct: 61  GPAEQFLQFTVEKSGGNGRSQFAATPNHLIRTPAGWSEAGDLIAGDRVMASEPHRLSDQQ 120

Query: 317 FQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKALMGNIRHTVRENSMGA 376
           FQVVLGSLMGDGNLSPN  DRNGVRFR+ G+G KQ +YLQWK  L+ NI H+  EN+ GA
Sbjct: 121 FQVVLGSLMGDGNLSPNRRDRNGVRFRM-GHGAKQGDYLQWKTDLLANIAHSAHENAKGA 179

Query: 377 SFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWYMDDGSFTVGSKRVQER 436
            F+DFTPLPEL ELQRAVYLGDGKKFLSEEYLKALTPL LAIWYMDDG FTV SK +Q+R
Sbjct: 180 RFVDFTPLPELAELQRAVYLGDGKKFLSEEYLKALTPLALAIWYMDDGGFTVRSKGLQQR 239

Query: 437 TAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAATAKFQS 496
           T GGSGRIEICV+AM+ G+R RLRDYL DTHGLDVRLR  G+AGKA+LVF+TAA+AKFQ 
Sbjct: 240 TEGGSGRIEICVEAMSVGSRDRLRDYLRDTHGLDVRLRHAGAAGKAMLVFTTAASAKFQE 299

Query: 497 LIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNRFDIEVE 556
           ++APY+APSMEYKLLP+FRG+G+V PQFVEPT++LVPAR+LD+HVK  TRSMNRFDIEVE
Sbjct: 300 IVAPYMAPSMEYKLLPRFRGQGTVAPQFVEPTERLVPARILDIHVKPHTRSMNRFDIEVE 359

Query: 557 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
           GNHNYFVDGVMVHNSPETTTGGKALKFYASVR+DVRRIETLKDG DAVGNRTR KIVKNK
Sbjct: 360 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRIDVRRIETLKDGTDAVGNRTRAKIVKNK 419

Query: 617 VSPP 620
           VSPP
Sbjct: 420 VSPP 423


>sp|Q9F416|RECA_MYCFA Tax_Id=1793 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName: Full=Mfa
           recA intein; Flags: Fragment;[Mycobacterium fallax]
          Length = 422

 Score =  712 bits (1839), Expect = 0.0
 Identities = 353/424 (83%), Positives = 384/424 (90%), Gaps = 2/424 (0%)

Query: 197 REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKVVNWFNN 256
           REKIGVMFGC +Y TRV LADGSTEKIGKIVN KMDV V+SYDPVTD+IVPRKVVNWFNN
Sbjct: 1   REKIGVMFGCFSYGTRVQLADGSTEKIGKIVNQKMDVEVMSYDPVTDQIVPRKVVNWFNN 60

Query: 257 GPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLSDQQ 316
           GPAEQFLQFTVEKSG NG+SQFAATPNHLIRTP GWTEAG+LIAGDRVLA E H+LSDQQ
Sbjct: 61  GPAEQFLQFTVEKSGGNGRSQFAATPNHLIRTPAGWTEAGDLIAGDRVLAAERHLLSDQQ 120

Query: 317 FQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKALMGNIRHTVRENSMGA 376
           FQV+LGSLMG GNLSPNL DRNGVRFR +G+G +Q +YL+WK AL+GNI H+VREN  GA
Sbjct: 121 FQVILGSLMGGGNLSPNLHDRNGVRFR-MGHGARQADYLEWKTALLGNIGHSVRENDQGA 179

Query: 377 SFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWYMDDGSFTVGSKRVQER 436
            F+DFTPLPEL EL+RAVYLGDGKKFLSE+YLKALTPL LA+WYMDDGSFTV SK VQ+R
Sbjct: 180 RFVDFTPLPELGELRRAVYLGDGKKFLSEDYLKALTPLALAVWYMDDGSFTVRSKGVQQR 239

Query: 437 TAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAATAKFQS 496
           T GGSGRIEICV+AM EGTR RLRDYL DTHGLDVRLR  GS GK++L FST ATAKFQ 
Sbjct: 240 TQGGSGRIEICVEAMAEGTRERLRDYLRDTHGLDVRLRSAGS-GKSMLTFSTEATAKFQE 298

Query: 497 LIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNRFDIEVE 556
           L+AP++APSME+KLLP+FRG G+V P+FVEP Q+LVPARVLDV VK  TRSMNRFDIEVE
Sbjct: 299 LVAPHMAPSMEHKLLPRFRGLGTVEPRFVEPAQRLVPARVLDVQVKPRTRSMNRFDIEVE 358

Query: 557 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
           GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDG DAVGNRTRVK+VKNK
Sbjct: 359 GNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGSDAVGNRTRVKVVKNK 418

Query: 617 VSPP 620
           VSPP
Sbjct: 419 VSPP 422


>sp|Q9F407|RECA_MYCTH Tax_Id=1797 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName: Full=Mth
           recA intein; Flags: Fragment;[Mycobacterium
           thermoresistibile]
          Length = 424

 Score =  701 bits (1810), Expect = 0.0
 Identities = 344/425 (80%), Positives = 386/425 (90%), Gaps = 2/425 (0%)

Query: 197 REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKVVNWFNN 256
           REKIGVMFGC +YSTR  LADG+TEKIGKIV+NKMDV VLSYDP TDRIVPRKVVNWFNN
Sbjct: 1   REKIGVMFGCFDYSTRAQLADGTTEKIGKIVDNKMDVEVLSYDPDTDRIVPRKVVNWFNN 60

Query: 257 GPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLSDQQ 316
           GPAEQ LQFTVEKSG NG+++FAATPNHLIRTPGGWTEAG+LIAGDRVLA EPH LSDQQ
Sbjct: 61  GPAEQLLQFTVEKSGGNGRARFAATPNHLIRTPGGWTEAGDLIAGDRVLAAEPHRLSDQQ 120

Query: 317 FQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKKALMGNIRHTVRENSMGA 376
           FQ+VLGSLMGDG LSP+   RNGVRFR+ G+G  +V+YL+WK AL+GNI+H+  EN+ GA
Sbjct: 121 FQIVLGSLMGDGTLSPDPRGRNGVRFRM-GHGADRVDYLEWKTALLGNIKHSTGENAEGA 179

Query: 377 SFIDFTPLPELVELQRAVYLGD-GKKFLSEEYLKALTPLVLAIWYMDDGSFTVGSKRVQE 435
            F+DFTPLPEL EL+RAVYLGD G+KF+SEEYLKALTPL LAIWYMDDGS TV S+ +Q+
Sbjct: 180 RFVDFTPLPELAELRRAVYLGDDGRKFISEEYLKALTPLALAIWYMDDGSLTVRSEGLQQ 239

Query: 436 RTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAATAKFQ 495
            TAGGSGRIEICV+AMTEG+R+RLRD+L DTHGLDVRLR+ G+ GKAVLVFSTAATA+FQ
Sbjct: 240 GTAGGSGRIEICVEAMTEGSRIRLRDHLRDTHGLDVRLRQAGAGGKAVLVFSTAATAEFQ 299

Query: 496 SLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNRFDIEV 555
            L+APY+APSMEYKLLP+FRG+  V PQFVEPTQ+LVPAR+LDVHV+  TRSMNR+DIEV
Sbjct: 300 ELVAPYMAPSMEYKLLPRFRGQSRVVPQFVEPTQRLVPARILDVHVEPHTRSMNRYDIEV 359

Query: 556 EGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKN 615
           EGNHNYFVDGVMVHNSPETTTGGKALKFYASVR+DVRRIETLKDG +AVGNRTR KIVKN
Sbjct: 360 EGNHNYFVDGVMVHNSPETTTGGKALKFYASVRIDVRRIETLKDGTEAVGNRTRAKIVKN 419

Query: 616 KVSPP 620
           KVSPP
Sbjct: 420 KVSPP 424


>sp|Q9F414|RECA_MYCGS Tax_Id=1777 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName: Full=Mga
           recA intein; Flags: Fragment;[Mycobacterium gastri]
          Length = 419

 Score =  564 bits (1454), Expect = e-158
 Identities = 285/420 (67%), Positives = 337/420 (80%), Gaps = 5/420 (1%)

Query: 197 REKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKVVNWFNN 256
           R+KIGVMFGC ++ T VTLADGSTEK+GKIVN KMDV VLSYD  + +IVPR+V NWFNN
Sbjct: 1   RDKIGVMFGCGSWYTNVTLADGSTEKLGKIVNQKMDVEVLSYDFESGQIVPRRVTNWFNN 60

Query: 257 GPAEQFLQFTVEKSGSN---GKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           G AE+FL F V+++GS    G +  A T NHLIRTP GW EA ++  GDRV+  +P +LS
Sbjct: 61  GKAEEFLHFKVDRAGSGTGRGHASLAMTRNHLIRTPVGWREAEDINVGDRVMLAQPRLLS 120

Query: 314 DQQFQVVLGSLMGDGNLSPNLC-DRNGVRFRLLGYGCKQVEYLQWKKALMGNIRHTVREN 372
           DQQ+++VLGSLMGDG LSP +  D    R R+ G+G +Q  Y  WK +L+ NI H+   N
Sbjct: 121 DQQWEIVLGSLMGDGCLSPPVRQDSESARLRI-GHGAQQSAYFDWKVSLLANIPHSRTVN 179

Query: 373 SMGASFIDFTPLPELVELQRAVYLGDGKKFLSEEYLKALTPLVLAIWYMDDGSFTVGSKR 432
             GA+F+DF+PL EL EL+ AVYLGDGKKFLSEEYLK LTPL LAIWYMDDGSF++ SK 
Sbjct: 180 GKGAAFVDFSPLAELHELRSAVYLGDGKKFLSEEYLKGLTPLSLAIWYMDDGSFSLRSKG 239

Query: 433 VQERTAGGSGRIEICVDAMTEGTRVRLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAATA 492
           +Q+RT GGSGRIEICV+AM+EG++VRLRDYL DTHGLDVRLR+ G+A KAVLVFSTAATA
Sbjct: 240 LQQRTQGGSGRIEICVEAMSEGSQVRLRDYLHDTHGLDVRLRKAGAAAKAVLVFSTAATA 299

Query: 493 KFQSLIAPYVAPSMEYKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNRFD 552
           KFQ L+APY+AP M YKLLP+F GR  VTPQFVEP  +L+PARV ++  K     M+RFD
Sbjct: 300 KFQQLVAPYMAPCMAYKLLPRFHGRSMVTPQFVEPIMELMPARVTEIESKTDYPIMSRFD 359

Query: 553 IEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKI 612
           IEVEG+HNYF DGVMVHNSPETTTGGKALKFYASVRMDV+RIETLKDG + V NRTRVKI
Sbjct: 360 IEVEGSHNYFADGVMVHNSPETTTGGKALKFYASVRMDVQRIETLKDGTNTVDNRTRVKI 419


>sp|P0A5U4|RECA_MYCTU Tax_Id=1773 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName:
           Full=Endonuclease PI-MtuI; EC=3.1.-.-; AltName: Full=Mtu
           recA intein;[Mycobacterium tuberculosis]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>sp|P0A5U5|RECA_MYCBO Tax_Id=1765 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A; Contains: RecName:
           Full=Endonuclease PI-MboI; EC=3.1.-.-; AltName: Full=Mbo
           recA intein;[Mycobacterium bovis]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|C6DLH1|C6DLH1_MYCTK Tax_Id=478434 RecName: Full=Protein
           recA;[Mycobacterium tuberculosis]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|C1AFJ6|C1AFJ6_MYCBT Tax_Id=561275 (recA)RecName: Full=Protein
           recA;[Mycobacterium bovis]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|A5U689|A5U689_MYCTA Tax_Id=419947 (recA)RecName: Full=Protein
           recA;[Mycobacterium tuberculosis]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|A1KM75|A1KM75_MYCBP Tax_Id=410289 (recA)RecName: Full=Protein
           recA;[Mycobacterium bovis]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|A5WQY8|A5WQY8_MYCTF Tax_Id=336982 RecName: Full=Protein
           recA;[Mycobacterium tuberculosis]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|A4KK14|A4KK14_MYCTU Tax_Id=395095 RecName: Full=Protein
           recA;[Mycobacterium tuberculosis str. Haarlem]
          Length = 790

 Score =  361 bits (927), Expect = 2e-97
 Identities = 225/383 (58%), Positives = 249/383 (65%), Gaps = 64/383 (16%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEPHMLS 313
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV   +P    
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV--AQPRRFD 351

Query: 314 --------DQQFQVVLGSLMGDG 328
                         +LG L+GDG
Sbjct: 352 GFGDSAPIPADHARLLGYLIGDG 374



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|A2VL74|A2VL74_MYCTU Tax_Id=348776 RecName: Full=Protein
           recA;[Mycobacterium tuberculosis C]
          Length = 790

 Score =  361 bits (926), Expect = 2e-97
 Identities = 218/351 (62%), Positives = 239/351 (68%), Gaps = 54/351 (15%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLR+KIGVMFG    +T                RV TL DG T  +
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDG-TNAV 239

Query: 224 G-----KIVNNK-MDVRVLSYDPVT------------------------DRIVPRKVVNW 253
           G     K+V NK +      +DPVT                          +  R VV+W
Sbjct: 240 GNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW 299

Query: 254 FNNGPAEQFLQFTVEKSGSNGKSQFAATPNHLIRTPGGWTEAGNLIAGDRV 304
           F+ G  +      V      G +   ATP+H + T  GW  AG L  GDRV
Sbjct: 300 FDQGTRD------VIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRV 344



 Score =  157 bits (396), Expect = 6e-36
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 6/134 (4%)

Query: 584 YASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLI 641
           Y+ +R  +  RR  T    V+ +       +V +  SPPFKQAEFDILYGKGISREGSLI
Sbjct: 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716

Query: 642 DMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVTD 701
           DMGV+QG +RKSG+WFTYEGEQLGQGKENARNFL+ENADVA+         LGIGAVVTD
Sbjct: 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776

Query: 702 ----DDILPTPVDF 711
               D +LP PVDF
Sbjct: 777 DPSNDGVLPAPVDF 790



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNK 616
               GVM   SPETTTGGKALKFYASVRMDVRR+ETLKDG +AVGNRTRVK+VKNK
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNK 251


>tr|Q6J4N5|Q6J4N5_MYCIT Tax_Id=1767 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium intracellulare]
          Length = 304

 Score =  351 bits (900), Expect = 2e-94
 Identities = 185/211 (87%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDEM QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  196 bits (498), Expect = 9e-48
 Identities = 111/169 (65%), Positives = 125/169 (73%), Gaps = 18/169 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 REKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKE 669
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSGSWFTYEGEQLGQGKE
Sbjct: 256 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKE 304


>tr|A1XM11|A1XM11_9MYCO Tax_Id=35617 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium indicus pranii]
          Length = 304

 Score =  351 bits (900), Expect = 2e-94
 Identities = 185/211 (87%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDEM QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  196 bits (498), Expect = 9e-48
 Identities = 111/169 (65%), Positives = 125/169 (73%), Gaps = 18/169 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 REKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKE 669
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSGSWFTYEGEQLGQGKE
Sbjct: 256 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKE 304


>sp|P62219|RECA_MYCPA Tax_Id=1770 (recA)RecName: Full=Protein recA;
           AltName: Full=Recombinase A;[Mycobacterium
           paratuberculosis]
          Length = 350

 Score =  349 bits (896), Expect = 6e-94
 Identities = 184/211 (87%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELAMAQIEK+YGKGSVMRLGDEM QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  239 bits (611), Expect = 7e-61
 Identities = 137/215 (63%), Positives = 154/215 (71%), Gaps = 22/215 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 REKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSGSWFTYEGEQLGQGKENAR FL+EN +
Sbjct: 256 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENARTFLMENDE 315

Query: 681 VANXXXXXXXXXLGIGAVVT----DDDILPTPVDF 711
           VAN         LGIGAVVT    DD +LP PVDF
Sbjct: 316 VANEIEKKIKEKLGIGAVVTDDLSDDGVLPAPVDF 350


>sp|A0QIR6|RECA_MYCA1 Tax_Id=243243 (recA)RecName: Full=Protein
           recA; AltName: Full=Recombinase A;[Mycobacterium avium]
          Length = 350

 Score =  349 bits (896), Expect = 6e-94
 Identities = 184/211 (87%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELAMAQIEK+YGKGSVMRLGDEM QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  239 bits (611), Expect = 7e-61
 Identities = 137/215 (63%), Positives = 154/215 (71%), Gaps = 22/215 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 REKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSGSWFTYEGEQLGQGKENAR FL+EN +
Sbjct: 256 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENARTFLMENDE 315

Query: 681 VANXXXXXXXXXLGIGAVVT----DDDILPTPVDF 711
           VAN         LGIGAVVT    DD +LP PVDF
Sbjct: 316 VANEIEKKIKEKLGIGAVVTDDLSDDGVLPAPVDF 350


>tr|Q6J4L8|Q6J4L8_MYCGS Tax_Id=1777 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium gastri]
          Length = 304

 Score =  349 bits (896), Expect = 6e-94
 Identities = 184/211 (87%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  196 bits (498), Expect = 9e-48
 Identities = 111/169 (65%), Positives = 125/169 (73%), Gaps = 18/169 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKE 669
           FKQAEFDILYGKGISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKE
Sbjct: 256 FKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKE 304


>tr|Q6J4L7|Q6J4L7_MYCKA Tax_Id=1768 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium kansasii]
          Length = 304

 Score =  349 bits (896), Expect = 6e-94
 Identities = 184/211 (87%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  196 bits (498), Expect = 9e-48
 Identities = 111/169 (65%), Positives = 125/169 (73%), Gaps = 18/169 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKE 669
           FKQAEFDILYGKGISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKE
Sbjct: 256 FKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKE 304


>sp|B2HL06|RECA_MYCMM Tax_Id=216594 (recA)RecName: Full=Protein
           recA; AltName: Full=Recombinase A;[Mycobacterium
           marinum]
          Length = 346

 Score =  348 bits (894), Expect = 1e-93
 Identities = 182/211 (86%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPIS+IPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  248 bits (633), Expect = 2e-63
 Identities = 138/211 (65%), Positives = 155/211 (73%), Gaps = 18/211 (8%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKENARNFLLEN +
Sbjct: 256 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLLENGE 315

Query: 681 VANXXXXXXXXXLGIGAVVTDDDILPTPVDF 711
           VAN         LGIGAVVTDD +LP PVDF
Sbjct: 316 VANEIEKKIKEKLGIGAVVTDDGVLPAPVDF 346


>tr|Q6J4M4|Q6J4M4_MYCMR Tax_Id=1781 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium marinum]
          Length = 324

 Score =  348 bits (894), Expect = 1e-93
 Identities = 182/211 (86%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPIS+IPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  219 bits (557), Expect = 1e-54
 Identities = 122/183 (66%), Positives = 138/183 (75%), Gaps = 18/183 (9%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKENARNFLLEN +
Sbjct: 256 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLLENGE 315

Query: 681 VAN 683
           VAN
Sbjct: 316 VAN 318


>tr|Q6J4M6|Q6J4M6_MYCGO Tax_Id=1778 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium gordonae]
          Length = 324

 Score =  348 bits (892), Expect = 2e-93
 Identities = 182/211 (86%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  218 bits (555), Expect = 2e-54
 Identities = 120/183 (65%), Positives = 137/183 (74%), Gaps = 18/183 (9%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVR+DVRRIETLKDG +AVGNRTRVK+VKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRLDVRRIETLKDGTNAVGNRTRVKVVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYGKGISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKENARNFLLEN D
Sbjct: 256 FKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLLENGD 315

Query: 681 VAN 683
           + N
Sbjct: 316 IGN 318


>sp|A0PT89|RECA_MYCUA Tax_Id=362242 (recA)RecName: Full=Protein
           recA; AltName: Full=Recombinase A;[Mycobacterium
           ulcerans]
          Length = 346

 Score =  347 bits (890), Expect = 3e-93
 Identities = 181/211 (85%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPIS+IPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEI DMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIVDMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  247 bits (630), Expect = 5e-63
 Identities = 138/211 (65%), Positives = 154/211 (72%), Gaps = 18/211 (8%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKENARNFLLEN  
Sbjct: 256 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLLENGG 315

Query: 681 VANXXXXXXXXXLGIGAVVTDDDILPTPVDF 711
           VAN         LGIGAVVTDD +LP PVDF
Sbjct: 316 VANEIEKKIKEKLGIGAVVTDDGVLPAPVDF 346


>tr|Q6J4M1|Q6J4M1_MYCSZ Tax_Id=1787 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium szulgai]
          Length = 309

 Score =  347 bits (889), Expect = 4e-93
 Identities = 181/211 (85%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M+Q PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MSQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+PEYAK+LGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKRLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  206 bits (525), Expect = 7e-51
 Identities = 116/174 (66%), Positives = 130/174 (74%), Gaps = 18/174 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNF 674
           FKQAEFDILYGKGISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKENARNF
Sbjct: 256 FKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNF 309


>tr|Q6J4M7|Q6J4M7_MYCGO Tax_Id=1778 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium gordonae]
          Length = 324

 Score =  346 bits (888), Expect = 5e-93
 Identities = 181/211 (85%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSV ALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVTALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  218 bits (555), Expect = 2e-54
 Identities = 120/183 (65%), Positives = 137/183 (74%), Gaps = 18/183 (9%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVTALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVR+DVRRIETLKDG +AVGNRTRVK+VKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRLDVRRIETLKDGTNAVGNRTRVKVVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYGKGISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKENARNFLLEN D
Sbjct: 256 FKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLLENGD 315

Query: 681 VAN 683
           + N
Sbjct: 316 IGN 318


>tr|Q6J4N3|Q6J4N3_MYCAV Tax_Id=1764 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium avium]
          Length = 321

 Score =  345 bits (886), Expect = 9e-93
 Identities = 182/207 (87%), Positives = 189/207 (91%)

Query: 5   PDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRIVE 64
           PDREKALELAMAQIEK+YGKGSVMRLGDEM QPISVIPTGSIALDVALGIGGLPRGR+VE
Sbjct: 2   PDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRGRVVE 61

Query: 65  IYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDTGE 124
           IYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQPDTGE
Sbjct: 62  IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGE 121

Query: 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGALS 184
           QALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMTGAL+
Sbjct: 122 QALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181

Query: 185 NSGTTAIFINQLREKIGVMFGCMNYST 211
           NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 182 NSGTTAIFINQLREKIGVMFGSPETTT 208



 Score =  216 bits (550), Expect = 9e-54
 Identities = 121/183 (66%), Positives = 137/183 (74%), Gaps = 18/183 (9%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 134 GALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 193

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 194 REKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 252

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSGSWFTYEGEQLGQGKENAR FL+EN +
Sbjct: 253 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENARTFLMENDE 312

Query: 681 VAN 683
           VAN
Sbjct: 313 VAN 315


>tr|Q6J4L4|Q6J4L4_9MYCO Tax_Id=1798 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium triviale]
          Length = 304

 Score =  345 bits (886), Expect = 9e-93
 Identities = 179/211 (84%), Positives = 193/211 (91%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQVPDREKALELA+AQIEK++GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQVPDREKALELALAQIEKSHGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+PEYAK+LGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKRLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQA+RKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQAMRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GALSNSGTTAIFINQLREK+GVMFG    +T
Sbjct: 181 GALSNSGTTAIFINQLREKVGVMFGSPETTT 211



 Score =  192 bits (487), Expect = 2e-46
 Identities = 94/105 (89%), Positives = 100/105 (95%), Gaps = 1/105 (0%)

Query: 565 GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQA 624
           GVM   SPETTTGGKALKFY+SVR+DVRRIETLKDG DAVGNRTRVK+VKNKVSPPFKQA
Sbjct: 201 GVMF-GSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQA 259

Query: 625 EFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKE 669
           EFDILYGKGISREGSLIDMGV+ GF+RKSGSW+TYEGEQLGQGKE
Sbjct: 260 EFDILYGKGISREGSLIDMGVDHGFIRKSGSWYTYEGEQLGQGKE 304


>tr|Q6J4M2|Q6J4M2_MYCSZ Tax_Id=1787 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium szulgai]
          Length = 324

 Score =  345 bits (885), Expect = 1e-92
 Identities = 180/211 (85%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M+Q PDREKALELAMAQIEK+YGKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MSQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+PEYAK+LGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKRLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDIVVIDSV ALVPRAELEGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDIVVIDSVTALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLR+KIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTT 211



 Score =  222 bits (566), Expect = 1e-55
 Identities = 124/183 (67%), Positives = 139/183 (75%), Gaps = 18/183 (9%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GALDIVVIDSVTALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVKIVKNKVSPP
Sbjct: 197 RDKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYGKGISREGSLIDMGV+QGF+RKSG+WFTYEGEQLGQGKENARNFL+ENAD
Sbjct: 256 FKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLMENAD 315

Query: 681 VAN 683
           VAN
Sbjct: 316 VAN 318


>tr|Q6J4L6|Q6J4L6_MYCSH Tax_Id=29313 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium shimoidei]
          Length = 304

 Score =  345 bits (885), Expect = 1e-92
 Identities = 200/298 (67%), Positives = 219/298 (73%), Gaps = 13/298 (4%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKA+ELA+AQIEKN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQAPDREKAIELAIAQIEKNHGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYD 239
           GAL+NSGTTAIFINQLREKIGVMFG     +  T   G   K    V  +MDV R+ +  
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFG-----SPETTTGGKALKFYASV--RMDVRRIETLK 233

Query: 240 PVTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
             TD +  R  V    N  +  F Q   +     G S+  +          IR  G W
Sbjct: 234 DGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGSW 291



 Score =  198 bits (503), Expect = 2e-48
 Identities = 107/144 (74%), Positives = 116/144 (80%), Gaps = 13/144 (9%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 162 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 220

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVRMDVRRIETLKDG DAVGNRTRVK+VKNKVSPPFKQAEFDILYGKGISREGSLIDMGV
Sbjct: 221 SVRMDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 280

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKE 669
           +QGF+RKSGSWFTYEGEQLGQGKE
Sbjct: 281 DQGFIRKSGSWFTYEGEQLGQGKE 304


>tr|Q7X428|Q7X428_9MYCO Tax_Id=230710 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium album]
          Length = 308

 Score =  345 bits (884), Expect = 2e-92
 Identities = 199/296 (67%), Positives = 219/296 (73%), Gaps = 13/296 (4%)

Query: 3   QVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRI 62
           Q PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRGR+
Sbjct: 4   QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63

Query: 63  VEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDT 122
           VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQPDT
Sbjct: 64  VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123

Query: 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGA 182
           GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMTGA
Sbjct: 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183

Query: 183 LSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYDPV 241
           L+NSGTTAIFINQLREKIGVMFG     +  T   G   K    V  +MDV R+ +    
Sbjct: 184 LNNSGTTAIFINQLREKIGVMFG-----SPETTTGGKALKFYASV--RMDVRRIETLKDG 236

Query: 242 TDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
           TD +  R  V    N  +  F Q   +     G S+  +       +  IR  G W
Sbjct: 237 TDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSW 292



 Score =  202 bits (513), Expect = 2e-49
 Identities = 110/147 (74%), Positives = 118/147 (80%), Gaps = 13/147 (8%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 163 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 221

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVRMDVRRIETLKDG DAVGNRTRVKIVKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 222 SVRMDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGV 281

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENAR 672
           E GF+RKSGSWFTYEGEQLGQGKENAR
Sbjct: 282 EHGFIRKSGSWFTYEGEQLGQGKENAR 308


>tr|Q5QJ34|Q5QJ34_9MYCO Tax_Id=146021 (recA)RecName: Full=Protein
           recA;[Mycobacterium houstonense]
          Length = 349

 Score =  345 bits (884), Expect = 2e-92
 Identities = 199/296 (67%), Positives = 219/296 (73%), Gaps = 13/296 (4%)

Query: 3   QVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRI 62
           Q PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRGR+
Sbjct: 4   QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63

Query: 63  VEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDT 122
           VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQPDT
Sbjct: 64  VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123

Query: 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGA 182
           GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMTGA
Sbjct: 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183

Query: 183 LSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYDPV 241
           L+NSGTTAIFINQLREKIGVMFG     +  T   G   K    V  +MDV R+ +    
Sbjct: 184 LNNSGTTAIFINQLREKIGVMFG-----SPETTTGGKALKFYASV--RMDVRRIETLKDG 236

Query: 242 TDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
           TD +  R  V    N  +  F Q   +     G S+  +       +  IR  G W
Sbjct: 237 TDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSW 292



 Score =  243 bits (620), Expect = 7e-62
 Identities = 135/188 (71%), Positives = 144/188 (76%), Gaps = 15/188 (7%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 163 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 221

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVRMDVRRIETLKDG DAVGNRTRVKIVKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 222 SVRMDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGV 281

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVT--DDD 703
           E GF+RKSGSWFTYEGEQLGQGKENAR FLLEN DVAN         LGIGAVVT   DD
Sbjct: 282 EHGFIRKSGSWFTYEGEQLGQGKENARKFLLENVDVANEIEKKIKEKLGIGAVVTAEADD 341

Query: 704 ILPTPVDF 711
           +LP PVDF
Sbjct: 342 VLPAPVDF 349


>tr|Q5QJ32|Q5QJ32_9MYCO Tax_Id=1802 (recA)RecName: Full=Protein
           recA;[Mycobacterium farcinogenes]
          Length = 349

 Score =  345 bits (884), Expect = 2e-92
 Identities = 199/296 (67%), Positives = 219/296 (73%), Gaps = 13/296 (4%)

Query: 3   QVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRI 62
           Q PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRGR+
Sbjct: 4   QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63

Query: 63  VEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDT 122
           VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQPDT
Sbjct: 64  VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123

Query: 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGA 182
           GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMTGA
Sbjct: 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183

Query: 183 LSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYDPV 241
           L+NSGTTAIFINQLREKIGVMFG     +  T   G   K    V  +MDV R+ +    
Sbjct: 184 LNNSGTTAIFINQLREKIGVMFG-----SPETTTGGKALKFYASV--RMDVRRIETLKDG 236

Query: 242 TDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
           TD +  R  V    N  +  F Q   +     G S+  +       +  IR  G W
Sbjct: 237 TDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSW 292



 Score =  243 bits (620), Expect = 7e-62
 Identities = 135/188 (71%), Positives = 144/188 (76%), Gaps = 15/188 (7%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 163 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 221

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVRMDVRRIETLKDG DAVGNRTRVKIVKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 222 SVRMDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGV 281

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVT--DDD 703
           E GF+RKSGSWFTYEGEQLGQGKENAR FLLEN DVAN         LGIGAVVT   DD
Sbjct: 282 EHGFIRKSGSWFTYEGEQLGQGKENARKFLLENVDVANEIEKKIKEKLGIGAVVTAEADD 341

Query: 704 ILPTPVDF 711
           +LP PVDF
Sbjct: 342 VLPAPVDF 349


>tr|Q5QJ27|Q5QJ27_9MYCO Tax_Id=1796 (recA)RecName: Full=Protein
           recA;[Mycobacterium senegalense]
          Length = 349

 Score =  345 bits (884), Expect = 2e-92
 Identities = 199/296 (67%), Positives = 219/296 (73%), Gaps = 13/296 (4%)

Query: 3   QVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRI 62
           Q PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRGR+
Sbjct: 4   QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63

Query: 63  VEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDT 122
           VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQPDT
Sbjct: 64  VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123

Query: 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGA 182
           GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMTGA
Sbjct: 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183

Query: 183 LSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYDPV 241
           L+NSGTTAIFINQLREKIGVMFG     +  T   G   K    V  +MDV R+ +    
Sbjct: 184 LNNSGTTAIFINQLREKIGVMFG-----SPETTTGGKALKFYASV--RMDVRRIETLKDG 236

Query: 242 TDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
           TD +  R  V    N  +  F Q   +     G S+  +       +  IR  G W
Sbjct: 237 TDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSW 292



 Score =  243 bits (620), Expect = 7e-62
 Identities = 135/188 (71%), Positives = 144/188 (76%), Gaps = 15/188 (7%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 163 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 221

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVRMDVRRIETLKDG DAVGNRTRVKIVKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 222 SVRMDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGV 281

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVT--DDD 703
           E GF+RKSGSWFTYEGEQLGQGKENAR FLLEN DVAN         LGIGAVVT   DD
Sbjct: 282 EHGFIRKSGSWFTYEGEQLGQGKENARKFLLENVDVANEIEKKIKEKLGIGAVVTAEADD 341

Query: 704 ILPTPVDF 711
           +LP PVDF
Sbjct: 342 VLPAPVDF 349


>tr|Q5QJ17|Q5QJ17_9MYCO Tax_Id=59750 (recA)RecName: Full=Protein
           recA;[Mycobacterium wolinskyi]
          Length = 349

 Score =  345 bits (884), Expect = 2e-92
 Identities = 199/296 (67%), Positives = 219/296 (73%), Gaps = 13/296 (4%)

Query: 3   QVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRI 62
           Q PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRGR+
Sbjct: 4   QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63

Query: 63  VEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDT 122
           VEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQPDT
Sbjct: 64  VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123

Query: 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGA 182
           GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMTGA
Sbjct: 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183

Query: 183 LSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYDPV 241
           L+NSGTTAIFINQLREKIGVMFG     +  T   G   K    V  +MDV R+ +    
Sbjct: 184 LNNSGTTAIFINQLREKIGVMFG-----SPETTTGGKALKFYASV--RMDVRRIETLKDG 236

Query: 242 TDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
           TD +  R  V    N  +  F Q   +     G S+  +       +  IR  G W
Sbjct: 237 TDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSW 292



 Score =  236 bits (601), Expect = 1e-59
 Identities = 132/188 (70%), Positives = 141/188 (75%), Gaps = 15/188 (7%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 163 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 221

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVRMDVRRIETLKDG DAVGNRTRVKIVKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 222 SVRMDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGV 281

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVANXXXXXXXXXLGIGAVVT--DDD 703
           E GF+RKSGSWFTYEGEQLGQGKENAR FLLEN D AN         LGIGA VT   D+
Sbjct: 282 EHGFIRKSGSWFTYEGEQLGQGKENARKFLLENVDAANEIEKRIKEKLGIGADVTAAADE 341

Query: 704 ILPTPVDF 711
            LP PVDF
Sbjct: 342 ALPAPVDF 349


>tr|Q7X427|Q7X427_9MYCO Tax_Id=230710 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium album]
          Length = 308

 Score =  344 bits (883), Expect = 2e-92
 Identities = 198/296 (66%), Positives = 219/296 (73%), Gaps = 13/296 (4%)

Query: 3   QVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRI 62
           Q PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRGR+
Sbjct: 4   QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63

Query: 63  VEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDT 122
           +EIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQPDT
Sbjct: 64  IEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123

Query: 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGA 182
           GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMTGA
Sbjct: 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183

Query: 183 LSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYDPV 241
           L+NSGTTAIFINQLREKIGVMFG     +  T   G   K    V  +MDV R+ +    
Sbjct: 184 LNNSGTTAIFINQLREKIGVMFG-----SPETTTGGKALKFYASV--RMDVRRIETLKDG 236

Query: 242 TDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
           TD +  R  V    N  +  F Q   +     G S+  +       +  IR  G W
Sbjct: 237 TDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSW 292



 Score =  202 bits (513), Expect = 2e-49
 Identities = 110/147 (74%), Positives = 118/147 (80%), Gaps = 13/147 (8%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 163 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 221

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVRMDVRRIETLKDG DAVGNRTRVKIVKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 222 SVRMDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGV 281

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENAR 672
           E GF+RKSGSWFTYEGEQLGQGKENAR
Sbjct: 282 EHGFIRKSGSWFTYEGEQLGQGKENAR 308


>tr|Q6J4N1|Q6J4N1_9MYCO Tax_Id=279273 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium sp. ATCC 35788]
          Length = 307

 Score =  344 bits (883), Expect = 2e-92
 Identities = 181/207 (87%), Positives = 189/207 (91%)

Query: 5   PDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRIVE 64
           PDREKALELAMAQIEK+YGKGSVMRLGDEM QPISVIPTGSIALDVALGIGGLPRGR+VE
Sbjct: 2   PDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRGRVVE 61

Query: 65  IYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDTGE 124
           IYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQPDTGE
Sbjct: 62  IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 121

Query: 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGALS 184
           QALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMTGAL+
Sbjct: 122 QALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181

Query: 185 NSGTTAIFINQLREKIGVMFGCMNYST 211
           NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 182 NSGTTAIFINQLREKIGVMFGSPETTT 208



 Score =  206 bits (525), Expect = 7e-51
 Identities = 116/175 (66%), Positives = 130/175 (74%), Gaps = 18/175 (10%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 134 GALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 193

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVK+VKNKVSPP
Sbjct: 194 REKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKVVKNKVSPP 252

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFL 675
           FKQAEFDILYG+GISREGSLIDMGVEQGF+RKSGSWFTYEGEQLGQGKENAR FL
Sbjct: 253 FKQAEFDILYGRGISREGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGKENARTFL 307


>tr|Q6J4M8|Q6J4M8_MYCSI Tax_Id=1784 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium simiae]
          Length = 321

 Score =  344 bits (883), Expect = 2e-92
 Identities = 181/207 (87%), Positives = 189/207 (91%)

Query: 5   PDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRGRIVE 64
           PDREKALELAMAQIEK+YGKGSVMRLGDEM QPISVIPTGSIALDVALGIGGLPRGR+VE
Sbjct: 2   PDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRGRVVE 61

Query: 65  IYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQPDTGE 124
           IYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQPDTGE
Sbjct: 62  IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 121

Query: 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMTGALS 184
           QALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDS+VGLQARLMSQALRKMTGAL+
Sbjct: 122 QALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181

Query: 185 NSGTTAIFINQLREKIGVMFGCMNYST 211
           NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 182 NSGTTAIFINQLREKIGVMFGSPETTT 208



 Score =  220 bits (560), Expect = 6e-55
 Identities = 121/183 (66%), Positives = 138/183 (75%), Gaps = 18/183 (9%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   L     D HV L  R M++   ++ G  N       F++  
Sbjct: 134 GALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 193

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFYASVRMDVRRIETLKDG +AVGNRTRVK+VKNKVSPP
Sbjct: 194 REKIGVMF-GSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKVVKNKVSPP 252

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYG+GISREGSLIDMGV+QGF+RKSGSWFTYEGEQLGQGKEN RNFL+ENAD
Sbjct: 253 FKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENVRNFLMENAD 312

Query: 681 VAN 683
           +AN
Sbjct: 313 IAN 315


>tr|Q6J4M0|Q6J4M0_MYCNO Tax_Id=1782 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium nonchromogenicum]
          Length = 307

 Score =  344 bits (883), Expect = 2e-92
 Identities = 180/211 (85%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYA+KLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYARKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIAD LIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADTLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  200 bits (509), Expect = 5e-49
 Identities = 107/147 (72%), Positives = 119/147 (80%), Gaps = 13/147 (8%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 162 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 220

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVR+DVRRIETLKDG DAVGNRTRVK+VKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 221 SVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGRGISREGSLIDMGV 280

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENAR 672
           +QGF+RKSGSWFTY+GEQLGQGKENAR
Sbjct: 281 DQGFIRKSGSWFTYDGEQLGQGKENAR 307


>tr|Q6J4L9|Q6J4L9_MYCNO Tax_Id=1782 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium nonchromogenicum]
          Length = 243

 Score =  344 bits (883), Expect = 2e-92
 Identities = 180/211 (85%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYA+KLGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYARKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIAD LIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADTLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 47/83 (56%), Positives = 54/83 (65%), Gaps = 13/83 (15%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 162 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYA 220

Query: 586 SVRMDVRRIETLKDGVDAVGNRT 608
           SVR+DVRRIE LKDG DAVGNRT
Sbjct: 221 SVRLDVRRIEALKDGTDAVGNRT 243


>tr|Q6J4L5|Q6J4L5_9MYCO Tax_Id=1788 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium terrae]
          Length = 304

 Score =  344 bits (883), Expect = 2e-92
 Identities = 180/211 (85%), Positives = 191/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELAMAQI+KN+GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R+VEIYGPESSGKTTVALH             FIDAEHAL+PEYAK+LGVDTDSLLVSQP
Sbjct: 61  RVVEIYGPESSGKTTVALHAVANAQADGGIAAFIDAEHALDPEYAKRLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIAD LIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADTLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GAL+NSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  193 bits (491), Expect = 6e-47
 Identities = 103/144 (71%), Positives = 116/144 (80%), Gaps = 13/144 (9%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFY+
Sbjct: 162 DSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMF-GSPETTTGGKALKFYS 220

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVR+DVRRIETLKDG DAVGNRTRVK+VKNKVSPPFKQAEFDILYG+GISREGSLIDMGV
Sbjct: 221 SVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGRGISREGSLIDMGV 280

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKE 669
           +QGF+RKSGSWFTY+GEQLGQGKE
Sbjct: 281 DQGFIRKSGSWFTYDGEQLGQGKE 304


>tr|Q5QJ25|Q5QJ25_9MYCO Tax_Id=83262 (recA)RecName: Full=Protein
           recA;[Mycobacterium immunogenum]
          Length = 346

 Score =  344 bits (883), Expect = 2e-92
 Identities = 188/253 (74%), Positives = 208/253 (82%), Gaps = 23/253 (9%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELA+AQI+K++GKGSVMRLGDE+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADML+RSGA+D++VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRKMT
Sbjct: 121 DTGEQALEIADMLVRSGAIDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST----------------RV-TLADGSTEKI 223
           GAL+NSGTTAIFINQLREKIGVMFG    +T                R+ TL DG TE +
Sbjct: 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDG-TEAV 239

Query: 224 G-----KIVNNKM 231
           G     K+V NK+
Sbjct: 240 GNRTRVKVVKNKV 252



 Score =  248 bits (633), Expect = 2e-63
 Identities = 135/211 (63%), Positives = 156/211 (73%), Gaps = 18/211 (8%)

Query: 518 GSVTPQFVEPTQQLVPARVL-----DVHVKLSTRSMNRFDIEVEGNHN------YFVD-- 564
           G++    ++    LVP   +     D HV L  R M++   ++ G  N       F++  
Sbjct: 137 GAIDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQL 196

Query: 565 ----GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPP 620
               GVM   SPETTTGGKALKFY+SVR+DVRRIETLKDG +AVGNRTRVK+VKNKVSPP
Sbjct: 197 REKIGVMF-GSPETTTGGKALKFYSSVRLDVRRIETLKDGTEAVGNRTRVKVVKNKVSPP 255

Query: 621 FKQAEFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENAD 680
           FKQAEFDILYGKGIS+EGSLIDMGVEQGF+RKSGSWFTYEGEQLGQGKENARNFLLEN D
Sbjct: 256 FKQAEFDILYGKGISKEGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGKENARNFLLENVD 315

Query: 681 VANXXXXXXXXXLGIGAVVTDDDILPTPVDF 711
           VAN         LGIGAV+TDD+++P PVDF
Sbjct: 316 VANEIEKKIKEKLGIGAVLTDDEVVPAPVDF 346


>tr|Q7X424|Q7X424_9MYCO Tax_Id=1794 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium gadium]
          Length = 322

 Score =  344 bits (882), Expect = 3e-92
 Identities = 179/211 (84%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELA+AQIEKN+GKGSVMRLG+E+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELALAQIEKNHGKGSVMRLGEEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRK+T
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GALSNSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALSNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  219 bits (559), Expect = 8e-55
 Identities = 110/119 (92%), Positives = 113/119 (94%), Gaps = 1/119 (0%)

Query: 565 GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQA 624
           GVM   SPETTTGGKALKFYASVR+DVRRIETLKDG DAVGNRTRVK+VKNKVSPPFKQA
Sbjct: 201 GVMF-GSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQA 259

Query: 625 EFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVAN 683
           EFDILYGKGIS+EGSLIDMGVE GFVRKSGSWFTYEGEQLGQGKENARNFLLEN DVAN
Sbjct: 260 EFDILYGKGISKEGSLIDMGVEHGFVRKSGSWFTYEGEQLGQGKENARNFLLENPDVAN 318


>tr|Q6J4M3|Q6J4M3_MYCXE Tax_Id=1789 (recA)RecName: Full=Protein
           recA; Flags: Fragment;[Mycobacterium xenopi]
          Length = 324

 Score =  344 bits (882), Expect = 3e-92
 Identities = 199/298 (66%), Positives = 219/298 (73%), Gaps = 13/298 (4%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           M Q PDREKALELA+AQIEK+YGKGSVMRLGDE  QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MTQAPDREKALELAVAQIEKSYGKGSVMRLGDESRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           RIVEIYGPESSGKTTVALH             FIDAEHAL+PEYAKKLGVDTDSLLVSQP
Sbjct: 61  RIVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQA+RKM 
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQAMRKMA 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYSTRVTLADGSTEKIGKIVNNKMDV-RVLSYD 239
           GAL+NSGTTAIFINQLREK+GVMFG     +  T   G   K    V  ++DV R+ +  
Sbjct: 181 GALNNSGTTAIFINQLREKVGVMFG-----SPETTTGGKALKFYASV--RLDVSRIETLK 233

Query: 240 PVTDRIVPRKVVNWFNNGPAEQFLQFTVEKSGSNGKSQFAA-----TPNHLIRTPGGW 292
             TD +  R  +    N  A  F Q  ++     G S+  +         LIR  G W
Sbjct: 234 DGTDAVGNRTRIKVVKNKCAPPFRQAELDILYGKGISREGSLIDMGVDQGLIRKSGAW 291



 Score =  209 bits (531), Expect = 1e-51
 Identities = 110/158 (69%), Positives = 125/158 (79%), Gaps = 13/158 (8%)

Query: 538 DVHVKLSTRSMNRFDIEVEGNHN------YFVD------GVMVHNSPETTTGGKALKFYA 585
           D HV L  R M++   ++ G  N       F++      GVM   SPETTTGGKALKFYA
Sbjct: 162 DSHVGLQARLMSQAMRKMAGALNNSGTTAIFINQLREKVGVMF-GSPETTTGGKALKFYA 220

Query: 586 SVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQAEFDILYGKGISREGSLIDMGV 645
           SVR+DV RIETLKDG DAVGNRTR+K+VKNK +PPF+QAE DILYGKGISREGSLIDMGV
Sbjct: 221 SVRLDVSRIETLKDGTDAVGNRTRIKVVKNKCAPPFRQAELDILYGKGISREGSLIDMGV 280

Query: 646 EQGFVRKSGSWFTYEGEQLGQGKENARNFLLENADVAN 683
           +QG +RKSG+WFTYEGEQLGQGKENARNFLL+N DVAN
Sbjct: 281 DQGLIRKSGAWFTYEGEQLGQGKENARNFLLQNTDVAN 318


>tr|A4Z8B7|A4Z8B7_9MYCO Tax_Id=1794 RecName: Full=Protein recA;
           Flags: Fragment;[Mycobacterium gadium]
          Length = 312

 Score =  344 bits (882), Expect = 3e-92
 Identities = 179/211 (84%), Positives = 192/211 (90%)

Query: 1   MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALDVALGIGGLPRG 60
           MAQ PDREKALELA+AQIEKN+GKGSVMRLG+E+ QPISVIPTGSIALDVALGIGGLPRG
Sbjct: 1   MAQAPDREKALELALAQIEKNHGKGSVMRLGEEVRQPISVIPTGSIALDVALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTVALHXXXXXXXXXXXXXFIDAEHALEPEYAKKLGVDTDSLLVSQP 120
           R++EIYGPESSGKTTVALH             FIDAEHAL+P+YAKKLGVDTDSLLVSQP
Sbjct: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSYVGLQARLMSQALRKMT 180
           DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDS+VGLQARLMSQALRK+T
Sbjct: 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIT 180

Query: 181 GALSNSGTTAIFINQLREKIGVMFGCMNYST 211
           GALSNSGTTAIFINQLREKIGVMFG    +T
Sbjct: 181 GALSNSGTTAIFINQLREKIGVMFGSPETTT 211



 Score =  210 bits (534), Expect = 6e-52
 Identities = 105/113 (92%), Positives = 108/113 (95%), Gaps = 1/113 (0%)

Query: 565 GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQA 624
           GVM   SPETTTGGKALKFYASVR+DVRRIETLKDG DAVGNRTRVK+VKNKVSPPFKQA
Sbjct: 201 GVMF-GSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQA 259

Query: 625 EFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNFLLE 677
           EFDILYGKGIS+EGSLIDMGVE GFVRKSGSWFTYEGEQLGQGKENARNFLLE
Sbjct: 260 EFDILYGKGISKEGSLIDMGVEHGFVRKSGSWFTYEGEQLGQGKENARNFLLE 312


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.318    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 5,107,164,781
Number of extensions: 217456373
Number of successful extensions: 546438
Number of sequences better than 10.0: 6248
Number of HSP's gapped: 546284
Number of HSP's successfully gapped: 10129
Length of query: 711
Length of database: 3,808,957,724
Length adjustment: 145
Effective length of query: 566
Effective length of database: 2,191,727,194
Effective search space: 1240517591804
Effective search space used: 1240517591804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 84 (37.0 bits)