BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML1004
         (164 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|Q49846|Q49846_MYCLE Tax_Id=1769 SubName: Full=Possible conser...   251   1e-65
tr|B8ZQU6|B8ZQU6_MYCLB Tax_Id=561304 SubName: Full=Possible cons...   251   1e-65
tr|Q73W25|Q73W25_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   137   4e-31
tr|A0QIQ2|A0QIQ2_MYCA1 Tax_Id=243243 SubName: Full=LysM domain p...   135   1e-30
tr|B2HLX9|B2HLX9_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp...   107   6e-22
tr|A0PT75|A0PT75_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp...   103   6e-21
tr|Q7TY16|Q7TY16_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE CONSER...    99   2e-19
tr|O07218|O07218_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE CONSER...    99   2e-19
tr|C6DLI8|C6DLI8_MYCTK Tax_Id=478434 SubName: Full=Conserved mem...    99   2e-19
tr|C1AFH8|C1AFH8_MYCBT Tax_Id=561275 SubName: Full=Putative unch...    99   2e-19
tr|A5U671|A5U671_MYCTA Tax_Id=419947 SubName: Full=Putative cons...    99   2e-19
tr|A1KM57|A1KM57_MYCBP Tax_Id=410289 SubName: Full=Possible cons...    99   2e-19
tr|A5WQX1|A5WQX1_MYCTF Tax_Id=336982 SubName: Full=Conserved mem...    99   2e-19
tr|A4KJZ9|A4KJZ9_MYCTU Tax_Id=395095 SubName: Full=Conserved mem...    99   2e-19
tr|A2VL59|A2VL59_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    99   2e-19
tr|A4TCN8|A4TCN8_MYCGI Tax_Id=350054 SubName: Full=Peptidoglycan...    93   1e-17
tr|A1T7V5|A1T7V5_MYCVP Tax_Id=350058 SubName: Full=Peptidoglycan...    88   3e-16
tr|Q1BA07|Q1BA07_MYCSS Tax_Id=164756 SubName: Full=Peptidoglycan...    84   4e-15
tr|A3PYG7|A3PYG7_MYCSJ Tax_Id=164757 SubName: Full=Peptidoglycan...    84   4e-15
tr|A1UF05|A1UF05_MYCSK Tax_Id=189918 SubName: Full=Peptidoglycan...    84   4e-15
tr|A0QVY7|A0QVY7_MYCS2 Tax_Id=246196 SubName: Full=DNA-damage-in...    80   9e-14
tr|Q4GWU1|Q4GWU1_MYCSM Tax_Id=1772 (ddiG)SubName: Full=DNA-damag...    80   9e-14
tr|B1MCZ4|B1MCZ4_MYCA9 Tax_Id=561007 SubName: Full=Putative unch...    69   2e-10
tr|A1SND0|A1SND0_NOCSJ Tax_Id=196162 SubName: Full=Peptidoglycan...    41   0.037
tr|C3JK95|C3JK95_RHOER Tax_Id=596309 SubName: Full=DNA-damage-in...    37   0.54 
tr|C0ZYQ0|C0ZYQ0_RHOE4 Tax_Id=234621 SubName: Full=Putative unch...    37   0.70 
tr|C1B3A5|C1B3A5_RHOOB Tax_Id=632772 SubName: Full=Hypothetical ...    37   0.92 
tr|C6WAB7|C6WAB7_ACTMD Tax_Id=446462 SubName: Full=Peptidoglycan...    36   1.2  
tr|D0LBQ7|D0LBQ7_9ACTO Tax_Id=526226 SubName: Full=Peptidoglycan...    33   7.8  

>tr|Q49846|Q49846_MYCLE Tax_Id=1769 SubName: Full=Possible conserved
           membrane protein; SubName:
           Full=B2235_C3_243;[Mycobacterium leprae]
          Length = 164

 Score =  251 bits (642), Expect = 1e-65
 Identities = 135/164 (82%), Positives = 135/164 (82%)

Query: 1   MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVA 60
           MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAG             MRYSGASVAMLVA
Sbjct: 1   MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAGSRRPAPSRSASAPMRYSGASVAMLVA 60

Query: 61  PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE 120
           PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE
Sbjct: 61  PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE 120

Query: 121 SLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
           SL                SERIRELNVLDSSMLVAGQTLIAPVG
Sbjct: 121 SLQDVAARVAPDAPVRQVSERIRELNVLDSSMLVAGQTLIAPVG 164


>tr|B8ZQU6|B8ZQU6_MYCLB Tax_Id=561304 SubName: Full=Possible
           conserved membrane protein;[Mycobacterium leprae]
          Length = 164

 Score =  251 bits (642), Expect = 1e-65
 Identities = 135/164 (82%), Positives = 135/164 (82%)

Query: 1   MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVA 60
           MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAG             MRYSGASVAMLVA
Sbjct: 1   MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAGSRRPAPSRSASAPMRYSGASVAMLVA 60

Query: 61  PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE 120
           PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE
Sbjct: 61  PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE 120

Query: 121 SLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
           SL                SERIRELNVLDSSMLVAGQTLIAPVG
Sbjct: 121 SLQDVAARVAPDAPVRQVSERIRELNVLDSSMLVAGQTLIAPVG 164


>tr|Q73W25|Q73W25_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 170

 Score =  137 bits (345), Expect = 4e-31
 Identities = 78/164 (47%), Positives = 97/164 (59%)

Query: 1   MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVA 60
           M VI+ + P   ++R P++ P+ G R G                    RY G  VAM VA
Sbjct: 7   MTVIHTLAPRPSSLRRPVNGPVQGVRYGRDGLTRPRRPGQVRPAGAATRYHGTGVAMSVA 66

Query: 61  PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE 120
           PHR R+V+   T+GLAL AG ITLWLGL+A+V QV++GDA     HVP+RLAVVRV+ GE
Sbjct: 67  PHRRRSVTWVTTVGLALAAGAITLWLGLVANVGQVLNGDAPSSAAHVPDRLAVVRVDPGE 126

Query: 121 SLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
           SL                ++RIRELN L+S  LVAGQTLIAPVG
Sbjct: 127 SLSDVAHRVAPDAPAAQVADRIRELNDLNSPTLVAGQTLIAPVG 170


>tr|A0QIQ2|A0QIQ2_MYCA1 Tax_Id=243243 SubName: Full=LysM domain
           protein;[Mycobacterium avium]
          Length = 164

 Score =  135 bits (341), Expect = 1e-30
 Identities = 76/164 (46%), Positives = 97/164 (59%)

Query: 1   MLVIYAVPPLIGNVRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVA 60
           M VI+ + P   ++R P++ P+ G R G                    RY G  VAM +A
Sbjct: 1   MTVIHTLAPRPSSLRRPVNGPVQGVRYGRDGLTRPRRPGPVRPAGAATRYHGTGVAMSIA 60

Query: 61  PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE 120
           PHR R+V+   T+GLAL AG ITLWLGL+A+V QV++GDA     HVP+RLAVVRV+ GE
Sbjct: 61  PHRRRSVTWVTTVGLALAAGAITLWLGLVANVGQVLNGDAPSSAAHVPDRLAVVRVDPGE 120

Query: 121 SLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
           SL                ++RIRELN L+S  L+AGQTLIAPVG
Sbjct: 121 SLSDVAHRVAPDAPAAQVADRIRELNDLNSPTLLAGQTLIAPVG 164


>tr|B2HLX9|B2HLX9_MYCMM Tax_Id=216594 SubName: Full=Conserved
           hypothetical membrane protein;[Mycobacterium marinum]
          Length = 180

 Score =  107 bits (266), Expect = 6e-22
 Identities = 70/168 (41%), Positives = 88/168 (52%), Gaps = 9/168 (5%)

Query: 6   AVPPLIGN------VRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLV 59
           AVP  +G       +R P+   I  P  G G  A              + Y G  VA+  
Sbjct: 13  AVPVRLGTREARRFIRGPVGGAIHEPVTGRGRLATSRRVRPSRPAVAPLSYRGTGVALSA 72

Query: 60  APHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDG---DATGFVTHVPNRLAVVRV 116
             HR R  S+A T+GLALLA +ITLWLGL+A   ++ +G   + +   + VP+RLAVVRV
Sbjct: 73  TAHRRRPASVATTVGLALLAAIITLWLGLVAHFGEMANGGSANVSPISSGVPDRLAVVRV 132

Query: 117 EAGESLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
           +AGESL                 ERIRELN L SSM  +GQTLIAPVG
Sbjct: 133 DAGESLQDVAARVAPDAPVRQVVERIRELNALGSSMPASGQTLIAPVG 180


>tr|A0PT75|A0PT75_MYCUA Tax_Id=362242 SubName: Full=Conserved
           hypothetical membrane protein;[Mycobacterium ulcerans]
          Length = 180

 Score =  103 bits (257), Expect = 6e-21
 Identities = 67/168 (39%), Positives = 86/168 (51%), Gaps = 9/168 (5%)

Query: 6   AVPPLIGN------VRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLV 59
           AVP  +G       +R P+   I  P  G G  A              + Y G  VA+  
Sbjct: 13  AVPVRLGTREARRFIRGPVGGTIHEPVTGRGRLATSRRVRPSRPAVAPLSYRGTGVALSA 72

Query: 60  APHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDG---DATGFVTHVPNRLAVVRV 116
             HR R  S+A T+GL LLA +ITLWLGL+A   ++ +G   + +   + VP+RL VVRV
Sbjct: 73  TAHRRRPASVATTVGLTLLAAIITLWLGLVAHFGEMANGGSANVSPISSGVPDRLTVVRV 132

Query: 117 EAGESLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
           +AGESL                 ERIRELN L SSM  +GQTL+APVG
Sbjct: 133 DAGESLQDVAARVAPDAPVRQVVERIRELNALGSSMPASGQTLVAPVG 180


>tr|Q7TY16|Q7TY16_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE CONSERVED
           MEMBRANE PROTEIN;[Mycobacterium bovis]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLHDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|O07218|O07218_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE CONSERVED
           MEMBRANE PROTEIN; SubName: Full=Putative uncharacterized
           protein;[Mycobacterium tuberculosis]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLYDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|C6DLI8|C6DLI8_MYCTK Tax_Id=478434 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLYDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|C1AFH8|C1AFH8_MYCBT Tax_Id=561275 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium bovis]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLHDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|A5U671|A5U671_MYCTA Tax_Id=419947 SubName: Full=Putative
           conserved membrane protein;[Mycobacterium tuberculosis]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLYDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|A1KM57|A1KM57_MYCBP Tax_Id=410289 SubName: Full=Possible
           conserved membrane protein;[Mycobacterium bovis]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLHDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|A5WQX1|A5WQX1_MYCTF Tax_Id=336982 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLYDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|A4KJZ9|A4KJZ9_MYCTU Tax_Id=395095 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLYDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|A2VL59|A2VL59_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 165

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/151 (43%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 21  PILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLAKTIGLALLAG 80
           P+ GPR    E A              +RY    V M    H  R V  A T+GLALLA 
Sbjct: 18  PLDGPRWRRAEPAQSRRPGRSRPGGAPLRYHRTGVGMSRTGHGSRPVPPATTVGLALLAA 77

Query: 81  MITLWLGLMADVSQVIDG-------DATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXX 133
            ITLWLGL+A   Q+I G       D+TG    VP+RLAVVRVE GESL           
Sbjct: 78  AITLWLGLVAQFGQMITGGSADGSADSTG---RVPDRLAVVRVETGESLYDVAVRVAPNA 134

Query: 134 XXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                ++RIRELN L +  L  GQTLIAPVG
Sbjct: 135 PTRQVADRIRELNGLQTPALAVGQTLIAPVG 165


>tr|A4TCN8|A4TCN8_MYCGI Tax_Id=350054 SubName:
           Full=Peptidoglycan-binding LysM;[Mycobacterium gilvum]
          Length = 203

 Score = 92.8 bits (229), Expect = 1e-17
 Identities = 55/116 (47%), Positives = 70/116 (60%), Gaps = 5/116 (4%)

Query: 48  MRYSGASVAMLVAPHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHV 107
           +RY G  V +  A HR R ++   T+GLAL+AG ITLWLGL+A V     G  +G  T +
Sbjct: 92  VRYRGTGVLVSRASHRRRPITPMATVGLALVAGAITLWLGLVAQV-----GGVSGAETQM 146

Query: 108 PNRLAVVRVEAGESLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPV 163
           P RLAVV+V++GESL                  RI+ELN LDS+ + AGQTLIAPV
Sbjct: 147 PGRLAVVQVQSGESLQHVARRVAPDAPVTEVVARIQELNELDSAAVDAGQTLIAPV 202


>tr|A1T7V5|A1T7V5_MYCVP Tax_Id=350058 SubName:
           Full=Peptidoglycan-binding LysM;[Mycobacterium
           vanbaalenii]
          Length = 202

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 53/116 (45%), Positives = 67/116 (57%), Gaps = 5/116 (4%)

Query: 48  MRYSGASVAMLVAPHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHV 107
           +RY G  V +  APHR R ++ A T+ LAL+A  ITLWLGL+        G+  G    +
Sbjct: 91  VRYRGTGVLVSRAPHRRRPITPATTVLLALVAAAITLWLGLVGQF-----GELVGDQAEI 145

Query: 108 PNRLAVVRVEAGESLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPV 163
           P RLAVV+V++GESL                 +RIRELN L+S  L AGQTLIAPV
Sbjct: 146 PGRLAVVQVQSGESLQHVAQRVAPDAPVADVVDRIRELNKLESVALDAGQTLIAPV 201


>tr|Q1BA07|Q1BA07_MYCSS Tax_Id=164756 SubName:
           Full=Peptidoglycan-binding LysM;[Mycobacterium sp.]
          Length = 148

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 61/154 (39%), Positives = 80/154 (51%), Gaps = 20/154 (12%)

Query: 15  RHPMSRPILGP----RCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLA 70
           +HP +R +  P    R  +G  AG             +R+ G  V +  A HR R ++ A
Sbjct: 11  QHPAARGVRRPVDARRPRAGRPAGAA-----------LRHRGNGVLVSRASHRRRPITPA 59

Query: 71  KTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESLXXXXXXXX 130
            T+ LAL+A  IT+WLGL+A++     G   G    VP  LAVV+V+ GESL        
Sbjct: 60  TTVLLALVAAGITVWLGLVANL-----GGVAGQQAPVPADLAVVQVQMGESLHQVAQRVA 114

Query: 131 XXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                    ERIRELN LDS+ + AGQTLIAPVG
Sbjct: 115 PDAPVGAVVERIRELNQLDSAAIDAGQTLIAPVG 148


>tr|A3PYG7|A3PYG7_MYCSJ Tax_Id=164757 SubName:
           Full=Peptidoglycan-binding LysM;[Mycobacterium sp.]
          Length = 148

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 61/154 (39%), Positives = 80/154 (51%), Gaps = 20/154 (12%)

Query: 15  RHPMSRPILGP----RCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLA 70
           +HP +R +  P    R  +G  AG             +R+ G  V +  A HR R ++ A
Sbjct: 11  QHPAARGVRRPVDARRPRAGRPAGAA-----------LRHRGNGVLVSRASHRRRPITPA 59

Query: 71  KTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESLXXXXXXXX 130
            T+ LAL+A  IT+WLGL+A++     G   G    VP  LAVV+V+ GESL        
Sbjct: 60  TTVLLALVAAGITVWLGLVANL-----GGVAGQQAPVPADLAVVQVQMGESLHQVAQRVA 114

Query: 131 XXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                    ERIRELN LDS+ + AGQTLIAPVG
Sbjct: 115 PDAPVGAVVERIRELNQLDSAAIDAGQTLIAPVG 148


>tr|A1UF05|A1UF05_MYCSK Tax_Id=189918 SubName:
           Full=Peptidoglycan-binding LysM;[Mycobacterium sp.]
          Length = 148

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 61/154 (39%), Positives = 80/154 (51%), Gaps = 20/154 (12%)

Query: 15  RHPMSRPILGP----RCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVSLA 70
           +HP +R +  P    R  +G  AG             +R+ G  V +  A HR R ++ A
Sbjct: 11  QHPAARGVRRPVDARRPRAGRPAGAA-----------LRHRGNGVLVSRASHRRRPITPA 59

Query: 71  KTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESLXXXXXXXX 130
            T+ LAL+A  IT+WLGL+A++     G   G    VP  LAVV+V+ GESL        
Sbjct: 60  TTVLLALVAAGITVWLGLVANL-----GGVAGQQAPVPADLAVVQVQMGESLHQVAQRVA 114

Query: 131 XXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                    ERIRELN LDS+ + AGQTLIAPVG
Sbjct: 115 PDAPVGAVVERIRELNQLDSAAIDAGQTLIAPVG 148


>tr|A0QVY7|A0QVY7_MYCS2 Tax_Id=246196 SubName:
           Full=DNA-damage-inducible protein;[Mycobacterium
           smegmatis]
          Length = 185

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 17/156 (10%)

Query: 9   PLIGNVRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVS 68
           P    VR    RP+  P+ G    A              +R+ G  V M  A HR R ++
Sbjct: 47  PASRRVRPRGERPVRRPQPGRPGGAA-------------LRHRGTGVLMSRASHR-RPIT 92

Query: 69  LAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESLXXXXXX 128
            A T+ LAL+A  IT+WLGL+A    V+   A      VP+ LAVV+V++GE+L      
Sbjct: 93  PATTVVLALVAAGITVWLGLVAQFGGVLGSSAP---VSVPSELAVVQVQSGETLQQVARR 149

Query: 129 XXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                      ++IR+LN L+S+ L AGQTLIAPVG
Sbjct: 150 VAPDAPVAAVVQQIRDLNQLESAALDAGQTLIAPVG 185


>tr|Q4GWU1|Q4GWU1_MYCSM Tax_Id=1772 (ddiG)SubName:
           Full=DNA-damage-inducible protein;[Mycobacterium
           smegmatis]
          Length = 185

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 17/156 (10%)

Query: 9   PLIGNVRHPMSRPILGPRCGSGESAGXXXXXXXXXXXXXMRYSGASVAMLVAPHRGRTVS 68
           P    VR    RP+  P+ G    A              +R+ G  V M  A HR R ++
Sbjct: 47  PASRRVRPRGERPVRRPQPGRPGGAA-------------LRHRGTGVLMSRASHR-RPIT 92

Query: 69  LAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESLXXXXXX 128
            A T+ LAL+A  IT+WLGL+A    V+   A      VP+ LAVV+V++GE+L      
Sbjct: 93  PATTVVLALVAAGITVWLGLVAQFGGVLGSSAP---VSVPSELAVVQVQSGETLQQVARR 149

Query: 129 XXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
                      ++IR+LN L+S+ L AGQTLIAPVG
Sbjct: 150 VAPDAPVAAVVQQIRDLNQLESAALDAGQTLIAPVG 185


>tr|B1MCZ4|B1MCZ4_MYCA9 Tax_Id=561007 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium abscessus]
          Length = 170

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 5/103 (4%)

Query: 62  HRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGES 121
           HR R VSL  TI +A+ A + T+WL ++  VS    G A      VP+RLAVV+V  GE+
Sbjct: 73  HRRRPVSLKATIVVAVGAAVATMWLLMLGQVSAAGIGGAG-----VPDRLAVVQVAPGET 127

Query: 122 LXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPVG 164
           L                  +IRELN LDS+ + AGQTL++PVG
Sbjct: 128 LADVASRVAPEAPRSAVVSKIRELNELDSATVQAGQTLVSPVG 170


>tr|A1SND0|A1SND0_NOCSJ Tax_Id=196162 SubName:
           Full=Peptidoglycan-binding LysM; Flags:
           Precursor;[Nocardioides sp.]
          Length = 118

 Score = 41.2 bits (95), Expect = 0.037
 Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 12/101 (11%)

Query: 63  RGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESL 122
           RGR V LA  + LA+LA      +G +     V    ATG   H P    VV V  G++L
Sbjct: 29  RGRLVVLAVAV-LAILA------IGFVLAGGSV----ATGESGH-PEPTRVVMVGTGDTL 76

Query: 123 XXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAPV 163
                            +RI+ LN LDS M+VAGQ L+ PV
Sbjct: 77  WDIAAGLSDDGDVRAMVDRIQRLNALDSGMVVAGQRLLVPV 117


>tr|C3JK95|C3JK95_RHOER Tax_Id=596309 SubName:
           Full=DNA-damage-inducible protein;[Rhodococcus
           erythropolis SK121]
          Length = 237

 Score = 37.4 bits (85), Expect = 0.54
 Identities = 36/107 (33%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 62  HRGRT-VSLAKTIGLALLAGMITLWLGLMADVSQV-----IDGDATGFVTHVPNRLAVVR 115
           HR R  VS  +    A   G  T++LG +     V     I   ++G V        VVR
Sbjct: 127 HRNRVGVSRVEHEVAAEDVGWKTVFLGAVFTAFAVLALVGIGALSSGDVAATNGATEVVR 186

Query: 116 VEAGESLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAP 162
           V AGESL                 E+I +LN + SS L  GQTLI P
Sbjct: 187 VAAGESLSDIAAKVAPGQAVGSVIEQIMDLNAMSSSGLSVGQTLIVP 233


>tr|C0ZYQ0|C0ZYQ0_RHOE4 Tax_Id=234621 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus erythropolis]
          Length = 258

 Score = 37.0 bits (84), Expect = 0.70
 Identities = 24/63 (38%), Positives = 29/63 (46%)

Query: 100 ATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTL 159
           ++G V        VVRV AGESL                 E+I +LN + SS L  GQTL
Sbjct: 192 SSGDVAATNGATEVVRVAAGESLSDIAAKVAPGQAVGSVIEQIMDLNAMSSSGLSVGQTL 251

Query: 160 IAP 162
           I P
Sbjct: 252 IVP 254


>tr|C1B3A5|C1B3A5_RHOOB Tax_Id=632772 SubName: Full=Hypothetical
           membrane protein;[Rhodococcus opacus]
          Length = 165

 Score = 36.6 bits (83), Expect = 0.92
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 77  LLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESLXXXXXXXXXXXXXX 136
           +LAG++ +  G++  +  V    A G V+H      VV+V  GESL              
Sbjct: 77  VLAGVV-ITAGVLCGLFGVAQLAAGGTVSHSA-ATEVVQVRRGESLAAVAARIAPETPVA 134

Query: 137 XXSERIRELNVLDSSMLVAGQTLIAP 162
              ERI ELN + +S L  GQ+LI P
Sbjct: 135 QVIERIMELNAMSNSALHPGQSLIVP 160


>tr|C6WAB7|C6WAB7_ACTMD Tax_Id=446462 SubName:
           Full=Peptidoglycan-binding LysM;[Actinosynnema mirum]
          Length = 165

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 10/106 (9%)

Query: 61  PHRGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGE 120
           P  GR  SL +  G ALLA +    + L    +  I G        VP+R     V+ GE
Sbjct: 64  PAPGRARSLLRAFGGALLAALAAAAISLAYLQASGISG--------VPDRTTTAHVQVGE 115

Query: 121 SLXXXXXXXXXXXXXXXXSERIRELNVL--DSSMLVAGQTLIAPVG 164
           +L                +ERI ELN L    +++  GQ L  P G
Sbjct: 116 TLRDVAERSAPGSDPEAVAERIAELNGLGGPDAVVRPGQALTVPDG 161


>tr|D0LBQ7|D0LBQ7_9ACTO Tax_Id=526226 SubName:
           Full=Peptidoglycan-binding lysin domain
           protein;[Gordonia bronchialis DSM 43247]
          Length = 203

 Score = 33.5 bits (75), Expect = 7.8
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 63  RGRTVSLAKTIGLALLAGMITLWLGLMADVSQVIDGDATGFVTHVPNRLAVVRVEAGESL 122
           R R  ++   +G+AL    +T+W      V  ++  +    V+  P    VV V AG+SL
Sbjct: 110 RRRATAVGVLVGVALA---VTVW------VIGIVGNNYADSVSPQPVSTQVVHVRAGDSL 160

Query: 123 XXXXXXXXXXXXXXXXSERIRELNVLDSSMLVAGQTLIAP 162
                            + I ELN + SS L  GQ L+ P
Sbjct: 161 SSIAARVAPDMPRQTVIDEIVELNDMPSSGLRVGQPLLTP 200


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.322    0.137    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 887,776,134
Number of extensions: 24572608
Number of successful extensions: 60875
Number of sequences better than 10.0: 29
Number of HSP's gapped: 61133
Number of HSP's successfully gapped: 29
Length of query: 164
Length of database: 3,808,957,724
Length adjustment: 125
Effective length of query: 39
Effective length of database: 2,414,793,474
Effective search space: 94176945486
Effective search space used: 94176945486
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)