BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML1077
         (139 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|Q9CCA5|Q9CCA5_MYCLE Tax_Id=1769 SubName: Full=Putative unchar...   280   5e-74
tr|B8ZQZ3|B8ZQZ3_MYCLB Tax_Id=561304 SubName: Full=Putative unch...   280   5e-74
tr|C6DUF0|C6DUF0_MYCTK Tax_Id=478434 SubName: Full=RNA polymeras...   198   1e-49
tr|A5U1S0|A5U1S0_MYCTA Tax_Id=419947 SubName: Full=Putative unch...   198   1e-49
tr|O06290|O06290_MYCTU Tax_Id=1773 SubName: Full=Putative unchar...   198   1e-49
tr|A5WLQ0|A5WLQ0_MYCTF Tax_Id=336982 SubName: Full=Putative unch...   198   1e-49
tr|A2VHC2|A2VHC2_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   198   1e-49
tr|Q7U0C8|Q7U0C8_MYCBO Tax_Id=1765 SubName: Full=Putative unchar...   197   3e-49
tr|Q79FQ8|Q79FQ8_MYCTU Tax_Id=1773 SubName: Full=Putative unchar...   197   3e-49
tr|C1AML6|C1AML6_MYCBT Tax_Id=561275 SubName: Full=Putative unch...   197   3e-49
tr|A1KI10|A1KI10_MYCBP Tax_Id=410289 SubName: Full=Putative unch...   197   3e-49
tr|A4KGE7|A4KGE7_MYCTU Tax_Id=395095 SubName: Full=Putative unch...   197   3e-49
tr|Q8VK50|Q8VK50_MYCTU Tax_Id=1773 SubName: Full=Putative unchar...   197   4e-49
tr|Q73WV4|Q73WV4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   189   9e-47
tr|A0QCH1|A0QCH1_MYCA1 Tax_Id=243243 SubName: Full=RNA polymeras...   189   9e-47
tr|O05736|O05736_MYCAV Tax_Id=1764 SubName: Full=Putative unchar...   189   9e-47
tr|B2HS45|B2HS45_MYCMM Tax_Id=216594 SubName: Full=Putative unch...   188   2e-46
tr|A0PVW2|A0PVW2_MYCUA Tax_Id=362242 SubName: Full=Putative unch...   188   2e-46
tr|O05768|O05768_MYCSM Tax_Id=1772 SubName: Full=Putative unchar...   179   7e-44
tr|A0R2D3|A0R2D3_MYCS2 Tax_Id=246196 SubName: Full=Putative unch...   178   2e-43
tr|Q1B4T6|Q1B4T6_MYCSS Tax_Id=164756 SubName: Full=Putative unch...   170   5e-41
tr|A1UKA1|A1UKA1_MYCSK Tax_Id=189918 SubName: Full=Putative unch...   170   5e-41
tr|A3Q3Q5|A3Q3Q5_MYCSJ Tax_Id=164757 SubName: Full=Putative unch...   167   4e-40
tr|A1TDM0|A1TDM0_MYCVP Tax_Id=350058 SubName: Full=Putative unch...   155   1e-36
tr|A4T8X1|A4T8X1_MYCGI Tax_Id=350054 SubName: Full=Putative unch...   145   1e-33
tr|B1MLM2|B1MLM2_MYCA9 Tax_Id=561007 SubName: Full=Putative unch...   143   5e-33
tr|C1AZL4|C1AZL4_RHOOB Tax_Id=632772 SubName: Full=Putative unch...   111   3e-23
tr|C1A2N0|C1A2N0_RHOE4 Tax_Id=234621 SubName: Full=Putative unch...   110   5e-23
tr|Q0S3Y1|Q0S3Y1_RHOSR Tax_Id=101510 SubName: Full=Putative unch...   109   1e-22
tr|C3JTT4|C3JTT4_RHOER Tax_Id=596309 SubName: Full=RNA polymeras...   108   2e-22
tr|Q5YQF9|Q5YQF9_NOCFA Tax_Id=37329 SubName: Full=Putative uncha...    99   2e-19
tr|C2ARI6|C2ARI6_TSUPA Tax_Id=521096 SubName: Full=Putative unch...    93   8e-18
tr|Q6NHY5|Q6NHY5_CORDI Tax_Id=1717 SubName: Full=Putative unchar...    72   3e-11
tr|C8XJ70|C8XJ70_NAKMY Tax_Id=479431 SubName: Full=Putative unch...    62   2e-08
tr|C4LHV2|C4LHV2_CORK4 Tax_Id=645127 (cseE)SubName: Full=Anti-si...    61   4e-08
tr|D0L8U7|D0L8U7_9ACTO Tax_Id=526226 SubName: Full=Putative unch...    61   4e-08
tr|C6WL02|C6WL02_ACTMD Tax_Id=446462 SubName: Full=Putative tran...    60   8e-08
tr|C0XQL2|C0XQL2_9CORY Tax_Id=525263 SubName: Full=Putative unch...    59   1e-07
tr|C0U795|C0U795_9ACTO Tax_Id=526225 SubName: Full=Putative unch...    58   3e-07
tr|C5VDT4|C5VDT4_9CORY Tax_Id=553207 SubName: Full=Putative unch...    57   7e-07
tr|C0E7D6|C0E7D6_9CORY Tax_Id=566549 SubName: Full=Putative unch...    57   7e-07
tr|A4F8J3|A4F8J3_SACEN Tax_Id=405948 SubName: Full=Putative unch...    57   9e-07
tr|C2GIW7|C2GIW7_9CORY Tax_Id=548478 SubName: Full=Putative unch...    56   1e-06
tr|C0VTB0|C0VTB0_9CORY Tax_Id=548477 SubName: Full=Putative unch...    56   1e-06
tr|C7MVJ6|C7MVJ6_SACVD Tax_Id=471857 SubName: Full=Putative unch...    54   4e-06
tr|C0WFJ5|C0WFJ5_9CORY Tax_Id=525260 SubName: Full=Putative unch...    54   6e-06
tr|C8NVH0|C8NVH0_9CORY Tax_Id=585529 SubName: Full=Putative unch...    52   2e-05
tr|C6R8E3|C6R8E3_9CORY Tax_Id=553206 SubName: Full=Putative unch...    52   3e-05
tr|C2BQL6|C2BQL6_9CORY Tax_Id=525264 SubName: Full=Putative unch...    52   3e-05
tr|B5GQ33|B5GQ33_STRCL Tax_Id=443255 SubName: Full=Putative unch...    50   1e-04

>tr|Q9CCA5|Q9CCA5_MYCLE Tax_Id=1769 SubName: Full=Putative
           uncharacterized protein ML1077;[Mycobacterium leprae]
          Length = 139

 Score =  280 bits (715), Expect = 5e-74
 Identities = 138/139 (99%), Positives = 139/139 (100%)

Query: 1   VMADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR 60
           +MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR
Sbjct: 1   MMADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR 60

Query: 61  AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFS 120
           AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFS
Sbjct: 61  AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFS 120

Query: 121 EGSVSDRFVDGVAREQGKR 139
           EGSVSDRFVDGVAREQGKR
Sbjct: 121 EGSVSDRFVDGVAREQGKR 139


>tr|B8ZQZ3|B8ZQZ3_MYCLB Tax_Id=561304 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium leprae]
          Length = 139

 Score =  280 bits (715), Expect = 5e-74
 Identities = 138/139 (99%), Positives = 139/139 (100%)

Query: 1   VMADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR 60
           +MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR
Sbjct: 1   MMADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR 60

Query: 61  AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFS 120
           AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFS
Sbjct: 61  AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFS 120

Query: 121 EGSVSDRFVDGVAREQGKR 139
           EGSVSDRFVDGVAREQGKR
Sbjct: 121 EGSVSDRFVDGVAREQGKR 139


>tr|C6DUF0|C6DUF0_MYCTK Tax_Id=478434 SubName: Full=RNA polymerase
           sigma-70 factor;[Mycobacterium tuberculosis]
          Length = 219

 Score =  198 bits (504), Expect = 1e-49
 Identities = 105/150 (70%), Positives = 114/150 (76%), Gaps = 11/150 (7%)

Query: 1   VMADRGQV---FRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNA 57
           VMAD G V   FRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNA
Sbjct: 65  VMADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNA 124

Query: 58  HLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSE 117
           HLRAAHH+SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S 
Sbjct: 125 HLRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSS 184

Query: 118 PFSE--------GSVSDRFVDGVAREQGKR 139
             S             DRF DG    +G++
Sbjct: 185 GGSSQGPPDGAAAGFGDRFADGDGGNRGRQ 214


>tr|A5U1S0|A5U1S0_MYCTA Tax_Id=419947 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 219

 Score =  198 bits (504), Expect = 1e-49
 Identities = 105/150 (70%), Positives = 114/150 (76%), Gaps = 11/150 (7%)

Query: 1   VMADRGQV---FRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNA 57
           VMAD G V   FRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNA
Sbjct: 65  VMADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNA 124

Query: 58  HLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSE 117
           HLRAAHH+SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S 
Sbjct: 125 HLRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSS 184

Query: 118 PFSE--------GSVSDRFVDGVAREQGKR 139
             S             DRF DG    +G++
Sbjct: 185 GGSSQGPPDGAAAGFGDRFADGDGGNRGRQ 214


>tr|O06290|O06290_MYCTU Tax_Id=1773 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 193

 Score =  198 bits (504), Expect = 1e-49
 Identities = 105/150 (70%), Positives = 114/150 (76%), Gaps = 11/150 (7%)

Query: 1   VMADRGQV---FRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNA 57
           VMAD G V   FRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNA
Sbjct: 39  VMADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNA 98

Query: 58  HLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSE 117
           HLRAAHH+SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S 
Sbjct: 99  HLRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSS 158

Query: 118 PFSE--------GSVSDRFVDGVAREQGKR 139
             S             DRF DG    +G++
Sbjct: 159 GGSSQGPPDGAAAGFGDRFADGDGGNRGRQ 188


>tr|A5WLQ0|A5WLQ0_MYCTF Tax_Id=336982 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 193

 Score =  198 bits (504), Expect = 1e-49
 Identities = 105/150 (70%), Positives = 114/150 (76%), Gaps = 11/150 (7%)

Query: 1   VMADRGQV---FRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNA 57
           VMAD G V   FRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNA
Sbjct: 39  VMADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNA 98

Query: 58  HLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSE 117
           HLRAAHH+SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S 
Sbjct: 99  HLRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSS 158

Query: 118 PFSE--------GSVSDRFVDGVAREQGKR 139
             S             DRF DG    +G++
Sbjct: 159 GGSSQGPPDGAAAGFGDRFADGDGGNRGRQ 188


>tr|A2VHC2|A2VHC2_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 193

 Score =  198 bits (504), Expect = 1e-49
 Identities = 105/150 (70%), Positives = 114/150 (76%), Gaps = 11/150 (7%)

Query: 1   VMADRGQV---FRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNA 57
           VMAD G V   FRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNA
Sbjct: 39  VMADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNA 98

Query: 58  HLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSE 117
           HLRAAHH+SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S 
Sbjct: 99  HLRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSS 158

Query: 118 PFSE--------GSVSDRFVDGVAREQGKR 139
             S             DRF DG    +G++
Sbjct: 159 GGSSQGPPDGAAAGFGDRFADGDGGNRGRQ 188


>tr|Q7U0C8|Q7U0C8_MYCBO Tax_Id=1765 SubName: Full=Putative
           uncharacterized protein Mb1254;[Mycobacterium bovis]
          Length = 154

 Score =  197 bits (501), Expect = 3e-49
 Identities = 101/142 (71%), Positives = 110/142 (77%), Gaps = 8/142 (5%)

Query: 6   GQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHI 65
           G VFRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNAHLRAAHH+
Sbjct: 8   GHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAHLRAAHHL 67

Query: 66  SLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE---- 121
           SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S   S     
Sbjct: 68  SLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSSGGSSQGPP 127

Query: 122 ----GSVSDRFVDGVAREQGKR 139
                   DRF DG    +G++
Sbjct: 128 DGAAAGFGDRFADGDGGNRGRQ 149


>tr|Q79FQ8|Q79FQ8_MYCTU Tax_Id=1773 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 154

 Score =  197 bits (501), Expect = 3e-49
 Identities = 101/142 (71%), Positives = 110/142 (77%), Gaps = 8/142 (5%)

Query: 6   GQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHI 65
           G VFRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNAHLRAAHH+
Sbjct: 8   GHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAHLRAAHHL 67

Query: 66  SLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE---- 121
           SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S   S     
Sbjct: 68  SLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSSGGSSQGPP 127

Query: 122 ----GSVSDRFVDGVAREQGKR 139
                   DRF DG    +G++
Sbjct: 128 DGAAAGFGDRFADGDGGNRGRQ 149


>tr|C1AML6|C1AML6_MYCBT Tax_Id=561275 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium bovis]
          Length = 154

 Score =  197 bits (501), Expect = 3e-49
 Identities = 101/142 (71%), Positives = 110/142 (77%), Gaps = 8/142 (5%)

Query: 6   GQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHI 65
           G VFRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNAHLRAAHH+
Sbjct: 8   GHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAHLRAAHHL 67

Query: 66  SLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE---- 121
           SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S   S     
Sbjct: 68  SLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSSGGSSQGPP 127

Query: 122 ----GSVSDRFVDGVAREQGKR 139
                   DRF DG    +G++
Sbjct: 128 DGAAAGFGDRFADGDGGNRGRQ 149


>tr|A1KI10|A1KI10_MYCBP Tax_Id=410289 SubName: Full=Putative
           uncharacterized protein BCG_1282;[Mycobacterium bovis]
          Length = 154

 Score =  197 bits (501), Expect = 3e-49
 Identities = 101/142 (71%), Positives = 110/142 (77%), Gaps = 8/142 (5%)

Query: 6   GQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHI 65
           G VFRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNAHLRAAHH+
Sbjct: 8   GHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAHLRAAHHL 67

Query: 66  SLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE---- 121
           SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S   S     
Sbjct: 68  SLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSSGGSSQGPP 127

Query: 122 ----GSVSDRFVDGVAREQGKR 139
                   DRF DG    +G++
Sbjct: 128 DGAAAGFGDRFADGDGGNRGRQ 149


>tr|A4KGE7|A4KGE7_MYCTU Tax_Id=395095 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 154

 Score =  197 bits (501), Expect = 3e-49
 Identities = 101/142 (71%), Positives = 110/142 (77%), Gaps = 8/142 (5%)

Query: 6   GQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHI 65
           G VFRR FSWLPAQFASQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNAHLRAAHH+
Sbjct: 8   GHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAHLRAAHHL 67

Query: 66  SLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE---- 121
           SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S   S     
Sbjct: 68  SLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSSGGSSQGPP 127

Query: 122 ----GSVSDRFVDGVAREQGKR 139
                   DRF DG    +G++
Sbjct: 128 DGAAAGFGDRFADGDGGNRGRQ 149


>tr|Q8VK50|Q8VK50_MYCTU Tax_Id=1773 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 219

 Score =  197 bits (500), Expect = 4e-49
 Identities = 104/150 (69%), Positives = 113/150 (75%), Gaps = 11/150 (7%)

Query: 1   VMADRGQV---FRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNA 57
           VMAD G V   FRR FSWLPAQF SQ+DAPVGAPR+F STEHLS+EAIAAFVDGELRMNA
Sbjct: 65  VMADPGSVGHVFRRAFSWLPAQFTSQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNA 124

Query: 58  HLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSE 117
           HLRAAHH+SLCAQCAAEVDDQSR RAALRDSHPIRIPSTL GLL+ IPRC P+  S  S 
Sbjct: 125 HLRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSS 184

Query: 118 PFSE--------GSVSDRFVDGVAREQGKR 139
             S             DRF DG    +G++
Sbjct: 185 GGSSQGPPDGAAAGFGDRFADGDGGNRGRQ 214


>tr|Q73WV4|Q73WV4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 133

 Score =  189 bits (480), Expect = 9e-47
 Identities = 98/138 (71%), Positives = 106/138 (76%), Gaps = 13/138 (9%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           M DRG VFRR FSWLPAQFASQ+DAPVGAPR+FGSTEHLSVEAIAAFVDGELRMNAHLRA
Sbjct: 8   MPDRGHVFRRAFSWLPAQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMNAHLRA 67

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           AHH+S CAQCAAEVDDQSR RAALRDS PIRIP+ L G+L  IP  SPD           
Sbjct: 68  AHHLSQCAQCAAEVDDQSRARAALRDSRPIRIPANLLGMLAEIPYESPD----------- 116

Query: 122 GSVSDRFVDGVAREQGKR 139
               DR  D  AR++ +R
Sbjct: 117 --TPDRLADRDARDRRRR 132


>tr|A0QCH1|A0QCH1_MYCA1 Tax_Id=243243 SubName: Full=RNA polymerase
           sigma-70 factor;[Mycobacterium avium]
          Length = 424

 Score =  189 bits (480), Expect = 9e-47
 Identities = 98/138 (71%), Positives = 106/138 (76%), Gaps = 13/138 (9%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           M DRG VFRR FSWLPAQFASQ+DAPVGAPR+FGSTEHLSVEAIAAFVDGELRMNAHLRA
Sbjct: 299 MPDRGHVFRRAFSWLPAQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMNAHLRA 358

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           AHH+S CAQCAAEVDDQSR RAALRDS PIRIP+ L G+L  IP  SPD           
Sbjct: 359 AHHLSQCAQCAAEVDDQSRARAALRDSRPIRIPANLLGMLAEIPYESPD----------- 407

Query: 122 GSVSDRFVDGVAREQGKR 139
               DR  D  AR++ +R
Sbjct: 408 --APDRLADRDARDRRRR 423


>tr|O05736|O05736_MYCAV Tax_Id=1764 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium avium]
          Length = 133

 Score =  189 bits (480), Expect = 9e-47
 Identities = 98/138 (71%), Positives = 106/138 (76%), Gaps = 13/138 (9%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           M DRG VFRR FSWLPAQFASQ+DAPVGAPR+FGSTEHLSVEAIAAFVDGELRMNAHLRA
Sbjct: 8   MPDRGHVFRRAFSWLPAQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMNAHLRA 67

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           AHH+S CAQCAAEVDDQSR RAALRDS PIRIP+ L G+L  IP  SPD           
Sbjct: 68  AHHLSQCAQCAAEVDDQSRARAALRDSRPIRIPANLLGMLAEIPYESPD----------- 116

Query: 122 GSVSDRFVDGVAREQGKR 139
               DR  D  AR++ +R
Sbjct: 117 --APDRLADRDARDRRRR 132


>tr|B2HS45|B2HS45_MYCMM Tax_Id=216594 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium marinum]
          Length = 134

 Score =  188 bits (477), Expect = 2e-46
 Identities = 94/138 (68%), Positives = 108/138 (78%), Gaps = 5/138 (3%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           MADRG VFRR FSWLPAQFASQ+DAPVGAPRRF STEHLS+EAIAAFVDGELRMNAHLRA
Sbjct: 1   MADRGHVFRRAFSWLPAQFASQSDAPVGAPRRFRSTEHLSIEAIAAFVDGELRMNAHLRA 60

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           AHH+S+C QCAAEV+D +R RAALRDSHPIRIP+ L G+L+ IP    +       P   
Sbjct: 61  AHHLSMCPQCAAEVEDHTRARAALRDSHPIRIPTALLGMLSEIPHHPSE-----GAPEDT 115

Query: 122 GSVSDRFVDGVAREQGKR 139
             ++D F +  AR+Q KR
Sbjct: 116 TGLADSFAERQARDQRKR 133


>tr|A0PVW2|A0PVW2_MYCUA Tax_Id=362242 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium ulcerans]
          Length = 134

 Score =  188 bits (477), Expect = 2e-46
 Identities = 94/138 (68%), Positives = 108/138 (78%), Gaps = 5/138 (3%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           MADRG VFRR FSWLPAQFASQ+DAPVGAPRRF STEHLS+EAIAAFVDGELRMNAHLRA
Sbjct: 1   MADRGHVFRRAFSWLPAQFASQSDAPVGAPRRFRSTEHLSIEAIAAFVDGELRMNAHLRA 60

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           AHH+S+C QCAAEV+D +R RAALRDSHPIRIP+ L G+L+ IP    +       P   
Sbjct: 61  AHHLSMCPQCAAEVEDHTRARAALRDSHPIRIPTALLGMLSEIPHHPSE-----GAPEDT 115

Query: 122 GSVSDRFVDGVAREQGKR 139
             ++D F +  AR+Q KR
Sbjct: 116 TGLADSFAERQARDQRKR 133


>tr|O05768|O05768_MYCSM Tax_Id=1772 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium smegmatis]
          Length = 145

 Score =  179 bits (455), Expect = 7e-44
 Identities = 92/139 (66%), Positives = 108/139 (77%), Gaps = 7/139 (5%)

Query: 1   VMADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR 60
           VMAD G VFRR FSWLP+QFASQ+DAPVGAPR+FGSTEHLSVEAIAAFVDGELRM+AHLR
Sbjct: 13  VMADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLR 72

Query: 61  AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFS 120
           AAHH+SLC +CAAEVD QS+ R ALR+S PI IP++L G+L+ IP  +P+ T  VSE   
Sbjct: 73  AAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSE--- 129

Query: 121 EGSVSDRFVDGVAREQGKR 139
                 +F D   R + KR
Sbjct: 130 ----QAKFADDPTRGRRKR 144


>tr|A0R2D3|A0R2D3_MYCS2 Tax_Id=246196 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium smegmatis]
          Length = 132

 Score =  178 bits (451), Expect = 2e-43
 Identities = 91/138 (65%), Positives = 107/138 (77%), Gaps = 7/138 (5%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           MAD G VFRR FSWLP+QFASQ+DAPVGAPR+FGSTEHLSVEAIAAFVDGELRM+AHLRA
Sbjct: 1   MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           AHH+SLC +CAAEVD QS+ R ALR+S PI IP++L G+L+ IP  +P+ T  VSE    
Sbjct: 61  AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSE---- 116

Query: 122 GSVSDRFVDGVAREQGKR 139
                +F D   R + KR
Sbjct: 117 ---QAKFADDPTRGRRKR 131


>tr|Q1B4T6|Q1B4T6_MYCSS Tax_Id=164756 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 132

 Score =  170 bits (430), Expect = 5e-41
 Identities = 87/138 (63%), Positives = 105/138 (76%), Gaps = 7/138 (5%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           M D G VFRR FSWLPAQFASQ++APVGAPR+FGSTEHLS+EA+AAFVDGEL M AH+RA
Sbjct: 1   MVDPGHVFRRAFSWLPAQFASQSNAPVGAPRQFGSTEHLSIEAVAAFVDGELSMTAHMRA 60

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           A H+SLC QCAAEVD QS+ R+ALRDS PI IP+TL G+L+ IP+  P   SPV E    
Sbjct: 61  ASHLSLCPQCAAEVDAQSQARSALRDSQPIAIPNTLLGMLSQIPQHMPH--SPVEE---- 114

Query: 122 GSVSDRFVDGVAREQGKR 139
            +   +F D   R++ +R
Sbjct: 115 -ADQPKFADDQTRDRRRR 131


>tr|A1UKA1|A1UKA1_MYCSK Tax_Id=189918 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 132

 Score =  170 bits (430), Expect = 5e-41
 Identities = 87/138 (63%), Positives = 105/138 (76%), Gaps = 7/138 (5%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           M D G VFRR FSWLPAQFASQ++APVGAPR+FGSTEHLS+EA+AAFVDGEL M AH+RA
Sbjct: 1   MVDPGHVFRRAFSWLPAQFASQSNAPVGAPRQFGSTEHLSIEAVAAFVDGELSMTAHMRA 60

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121
           A H+SLC QCAAEVD QS+ R+ALRDS PI IP+TL G+L+ IP+  P   SPV E    
Sbjct: 61  ASHLSLCPQCAAEVDAQSQARSALRDSQPIAIPNTLLGMLSQIPQHMPH--SPVEE---- 114

Query: 122 GSVSDRFVDGVAREQGKR 139
            +   +F D   R++ +R
Sbjct: 115 -ADQPKFADDQTRDRRRR 131


>tr|A3Q3Q5|A3Q3Q5_MYCSJ Tax_Id=164757 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 132

 Score =  167 bits (423), Expect = 4e-40
 Identities = 83/128 (64%), Positives = 100/128 (78%), Gaps = 2/128 (1%)

Query: 2   MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61
           M D G VFRR FSWLPAQFASQ++APVGAPR+FGSTEHLS+EA+AAFVDGEL M AH+RA
Sbjct: 1   MVDPGHVFRRAFSWLPAQFASQSNAPVGAPRQFGSTEHLSIEAVAAFVDGELSMTAHMRA 60

Query: 62  AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSE--PF 119
           A+H+SLC QCAAEVD QS+ R ALRDS PI IP+TL G+L+ IP+  P  +   ++   F
Sbjct: 61  ANHMSLCLQCAAEVDAQSQARTALRDSQPIAIPNTLLGMLSQIPQHMPHSSVETADQPKF 120

Query: 120 SEGSVSDR 127
           +E    DR
Sbjct: 121 AEDPTRDR 128


>tr|A1TDM0|A1TDM0_MYCVP Tax_Id=350058 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium vanbaalenii]
          Length = 132

 Score =  155 bits (393), Expect = 1e-36
 Identities = 81/136 (59%), Positives = 99/136 (72%), Gaps = 8/136 (5%)

Query: 4   DRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAH 63
           D G  FRR FSWLP+Q ASQ+D PVG PR+FGSTEHLS+EA+AAFVDGELRM+AHLRAAH
Sbjct: 4   DPGHAFRRAFSWLPSQLASQSDDPVG-PRQFGSTEHLSIEAVAAFVDGELRMSAHLRAAH 62

Query: 64  HISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSEGS 123
           H+SLC +CA EVD Q + R ALR+S P+ +PS+L GLL+ IP       +PV  P  E +
Sbjct: 63  HLSLCPECALEVDAQRQAREALRESRPVAMPSSLLGLLSQIPN-----HTPVEAP--EPA 115

Query: 124 VSDRFVDGVAREQGKR 139
            S +  DG  R + KR
Sbjct: 116 DSPQLADGAQRSRRKR 131


>tr|A4T8X1|A4T8X1_MYCGI Tax_Id=350054 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium gilvum]
          Length = 133

 Score =  145 bits (367), Expect = 1e-33
 Identities = 81/140 (57%), Positives = 95/140 (67%), Gaps = 14/140 (10%)

Query: 1   VMADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLR 60
           V+ D G  FRR FSWLP    SQ+D+PVG PR+FGSTEHLS EAIAAF DGELRM AHLR
Sbjct: 6   VVFDPGHAFRRAFSWLP----SQSDSPVG-PRQFGSTEHLSTEAIAAFADGELRMTAHLR 60

Query: 61  AAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSP-DYTSPVSEPF 119
           AAHH+SLC++CA EVD Q + R ALRDS P+ IPS+L GLL+ IP  +P D   P   P 
Sbjct: 61  AAHHLSLCSECAQEVDAQRQAREALRDSCPVDIPSSLLGLLSQIPNRTPVDAQEPPESP- 119

Query: 120 SEGSVSDRFVDGVAREQGKR 139
                  +  DG  R + KR
Sbjct: 120 -------QLADGPPRARRKR 132


>tr|B1MLM2|B1MLM2_MYCA9 Tax_Id=561007 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium abscessus]
          Length = 147

 Score =  143 bits (361), Expect = 5e-33
 Identities = 75/119 (63%), Positives = 87/119 (73%), Gaps = 7/119 (5%)

Query: 2   MADRGQVFRRVFSW------LPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRM 55
           M D G  FRR FS       LP+ FASQ+ APVGAPR+FGSTEHLS EAIAAFVDGELRM
Sbjct: 1   MVDSGS-FRRAFSSFSSFSRLPSPFASQSGAPVGAPRQFGSTEHLSTEAIAAFVDGELRM 59

Query: 56  NAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSP 114
           +AHLRAAHH+S+CA+CA E+D Q + R ALRDS  IR+P +L GLL+ IP    D   P
Sbjct: 60  SAHLRAAHHLSMCAECALEIDAQRQARTALRDSGAIRVPGSLLGLLSQIPHIPHDVAPP 118


>tr|C1AZL4|C1AZL4_RHOOB Tax_Id=632772 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus opacus]
          Length = 120

 Score =  111 bits (277), Expect = 3e-23
 Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 9/106 (8%)

Query: 31  PRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHP 90
           PR+FGSTEHL+ EAIAAFVDGELRM+A+LRAAHH+S+CA+CA EVD Q + R ALR S  
Sbjct: 7   PRQFGSTEHLASEAIAAFVDGELRMSAYLRAAHHLSICAECAFEVDSQQQARRALRRSGD 66

Query: 91  IRIPSTLFGLLTAIPRCSP---------DYTSPVSEPFSEGSVSDR 127
           + +PS L GLL+ IP C+          D  +P S   SE S++ R
Sbjct: 67  VAMPSGLLGLLSQIPSCNQGDPADKSPFDSHTPDSPVTSEYSITSR 112


>tr|C1A2N0|C1A2N0_RHOE4 Tax_Id=234621 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus erythropolis]
          Length = 127

 Score =  110 bits (275), Expect = 5e-23
 Identities = 57/98 (58%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 30  APRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSH 89
           A R+FGSTEHL+ EAIAA+VDGELRM A+LRA+HHIS+CA+CAA VD Q + R ALR S 
Sbjct: 14  AHRQFGSTEHLASEAIAAYVDGELRMQAYLRASHHISICAECAAAVDAQQQARGALRRSG 73

Query: 90  PIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSEGSVSDR 127
            + +P +L GLL+ IP C+   T P SE  ++GSV ++
Sbjct: 74  EMTMPLSLVGLLSQIPSCNSPTTGPNSEN-ADGSVGNQ 110


>tr|Q0S3Y1|Q0S3Y1_RHOSR Tax_Id=101510 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus sp.]
          Length = 120

 Score =  109 bits (272), Expect = 1e-22
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 2/88 (2%)

Query: 31  PRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHP 90
           PR+FGSTEHL+ EAIAA+VDGELRM+A+LRAAHH+S+CA+CA EVD Q + R ALR S  
Sbjct: 7   PRQFGSTEHLASEAIAAYVDGELRMSAYLRAAHHLSICAECAFEVDSQQQARRALRRSGD 66

Query: 91  IRIPSTLFGLLTAIPRCSPDYTSPVSEP 118
           + +PS L GLL+ IP C  ++  P  +P
Sbjct: 67  VAMPSGLLGLLSQIPSC--NHGDPADKP 92


>tr|C3JTT4|C3JTT4_RHOER Tax_Id=596309 SubName: Full=RNA polymerase
           sigma-70 factor;[Rhodococcus erythropolis SK121]
          Length = 119

 Score =  108 bits (270), Expect = 2e-22
 Identities = 54/88 (61%), Positives = 67/88 (76%)

Query: 30  APRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSH 89
           A R+FGSTEHL+ EAIAA+VDGELRM A+LRA+HHIS+CA+CAA VD Q + R ALR S 
Sbjct: 6   AHRQFGSTEHLASEAIAAYVDGELRMQAYLRASHHISICAECAAAVDAQQQARGALRRSG 65

Query: 90  PIRIPSTLFGLLTAIPRCSPDYTSPVSE 117
            + +P +L GLL+ IP C+   T P SE
Sbjct: 66  EMTMPLSLVGLLSQIPSCNSPTTGPNSE 93


>tr|Q5YQF9|Q5YQF9_NOCFA Tax_Id=37329 SubName: Full=Putative
           uncharacterized protein;[Nocardia farcinica]
          Length = 159

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 47/77 (61%), Positives = 58/77 (75%)

Query: 29  GAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDS 88
           G P RF  TEHL+ EA+ A+VDGELRMNA+LRAAHHIS+C +CAAEV+ Q + R ALR S
Sbjct: 40  GRPPRFAPTEHLASEAVVAYVDGELRMNAYLRAAHHISVCPECAAEVEAQQQARIALRQS 99

Query: 89  HPIRIPSTLFGLLTAIP 105
            PI +P +L   L+ IP
Sbjct: 100 GPIAVPRSLHDSLSRIP 116


>tr|C2ARI6|C2ARI6_TSUPA Tax_Id=521096 SubName: Full=Putative
           uncharacterized protein;[Tsukamurella paurometabola DSM
           20162]
          Length = 129

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 49/91 (53%), Positives = 57/91 (62%), Gaps = 2/91 (2%)

Query: 31  PRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHP 90
           P  F STEHL+ EA+ AFVDGELRMNAHLRA  HI+ C  CAAEVD Q + R  LR+S  
Sbjct: 16  PGEFSSTEHLAFEAVVAFVDGELRMNAHLRAGTHIAQCPMCAAEVDAQRQVRNTLRESGE 75

Query: 91  IRIPSTLFGLLTAIPR--CSPDYTSPVSEPF 119
           I +P+ L G L  IP   C P   +   E F
Sbjct: 76  ISVPNRLLGQLAQIPTECCKPGGAAAPFEGF 106


>tr|Q6NHY5|Q6NHY5_CORDI Tax_Id=1717 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium diphtheriae]
          Length = 137

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 46/111 (41%), Positives = 59/111 (53%), Gaps = 3/111 (2%)

Query: 26  APVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAAL 85
           +P    R F S EHL+ EA+AAFVD EL   A  RA  H+  CA+C  E+  Q R    L
Sbjct: 6   SPKNKVRHFASVEHLNPEAVAAFVDNELSPAAAHRAKIHLVHCAECREEIHRQRRAADRL 65

Query: 86  RDSH--PIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSEGSVSDRFVDGVAR 134
           RD +   +R  S L   L +I  C PD  +    P S  S+ D+ +DGVAR
Sbjct: 66  RDGNNSDMRPSSDLIAKLQSIAACCPDGPTAEEVPSSPQSLLDK-LDGVAR 115


>tr|C8XJ70|C8XJ70_NAKMY Tax_Id=479431 SubName: Full=Putative
           uncharacterized protein;[Nakamurella multipartita]
          Length = 176

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 1/87 (1%)

Query: 35  GSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIP 94
           GS +HL+++A+ A+ DGE+ + A+ RAA H++ C QC AEV  Q   R+ LR +    +P
Sbjct: 4   GSVDHLTLDAVVAYADGEMPLVAYQRAAAHVARCPQCDAEVRAQLVARSWLRSAETPAMP 63

Query: 95  STLFGLLTAIPRCSPDY-TSPVSEPFS 120
           ++L   L +IP   P    +P  +P +
Sbjct: 64  TSLLDTLRSIPVALPAADPAPAGDPLT 90


>tr|C4LHV2|C4LHV2_CORK4 Tax_Id=645127 (cseE)SubName: Full=Anti-sigma
           factor;[Corynebacterium kroppenstedtii]
          Length = 184

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 31  PRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRD--S 88
           PR+F S EHLS EA+AAFVDGE+   A  R   H+  C +C  +V  Q      +R+  +
Sbjct: 7   PRQFSSIEHLSEEAVAAFVDGEMPPRAQRRVLRHLVHCEECRRDVKAQRDAAQRMREAAN 66

Query: 89  HPIRIPSTLFGLLTAIP-RCSPDYTS 113
            P+ + + L   L AIP  C P   S
Sbjct: 67  EPVHMSTELLHKLAAIPTNCDPQNPS 92


>tr|D0L8U7|D0L8U7_9ACTO Tax_Id=526226 SubName: Full=Putative
           uncharacterized protein;[Gordonia bronchialis DSM 43247]
          Length = 91

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 29/59 (49%), Positives = 37/59 (62%)

Query: 55  MNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTS 113
           M AH+RA HH++LC +C A VD Q+  RA LR+S  + IP +L   LT IP    D TS
Sbjct: 1   MTAHMRATHHLALCPECVAAVDAQTSARARLRESGRVSIPDSLLSQLTQIPTREIDMTS 59


>tr|C6WL02|C6WL02_ACTMD Tax_Id=446462 SubName: Full=Putative
           transmembrane anti-sigma factor;[Actinosynnema mirum]
          Length = 215

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 30/69 (43%), Positives = 43/69 (62%)

Query: 38  EHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTL 97
           +HL  +A+ AFVDGEL  +AH RA+ H++ C  CAAE   Q + R+A+R +     P+ L
Sbjct: 12  QHLLPDAVVAFVDGELSASAHSRASAHLAACPFCAAEAYSQQQARSAVRSATTPCAPAGL 71

Query: 98  FGLLTAIPR 106
              L AIP+
Sbjct: 72  LARLGAIPQ 80


>tr|C0XQL2|C0XQL2_9CORY Tax_Id=525263 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 124

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 43/101 (42%), Positives = 52/101 (51%), Gaps = 10/101 (9%)

Query: 27  PVGAPRR---FGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRA 83
           P  APR+   F STEHLS EA+AAF D EL  +A  RA  H+ LC +C AEV+ Q     
Sbjct: 6   PGPAPRKKKGFFSTEHLSPEAVAAFADQELSESALHRARVHVVLCEECRAEVNHQRAAAE 65

Query: 84  ALR---DSHPIRIPSTLFGLLTAIPRCS----PDYTSPVSE 117
            LR       +R P +L   L  +P  S    P    PVSE
Sbjct: 66  HLRCCNADDSVRAPRSLVQKLAEMPENSLHEQPRSLRPVSE 106


>tr|C0U795|C0U795_9ACTO Tax_Id=526225 SubName: Full=Putative
           uncharacterized protein;[Geodermatophilus obscurus DSM
           43160]
          Length = 196

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 39  HLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLF 98
           HL+ EAIAA VDGEL      RAA H++ CAQC   V  Q   + AL  S  + +P  L 
Sbjct: 7   HLAQEAIAALVDGELAGGPAARAARHLTGCAQCRMAVQAQREAKEALHASADVAVPGDLL 66

Query: 99  GLLTAIPRCSPDYTSPVSEPFS 120
             L AIP     +T+ V  P S
Sbjct: 67  SRLRAIP-----FTADVPGPGS 83


>tr|C5VDT4|C5VDT4_9CORY Tax_Id=553207 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium matruchotii
           ATCC 14266]
          Length = 122

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 34  FGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSH--PI 91
           F +T+HL+ EA+AA+ DGEL   A  RA  H+  C +C  EV+ Q      L++S+   +
Sbjct: 12  FATTDHLNPEAVAAYADGELSPLAMHRAKIHLVHCLECREEVERQRHASKRLKESNTAKV 71

Query: 92  RIPSTLFGLLTAIPRCSPDYTSPVSEPFSEGSVS-DRFVDGVAR 134
            +PS L   L  I +  PD   P +E     S S    +DG+AR
Sbjct: 72  EMPSDLRQRLMGIAQSCPD--GPCAEDIPRASESFIAKLDGIAR 113


>tr|C0E7D6|C0E7D6_9CORY Tax_Id=566549 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium matruchotii
           ATCC 33806]
          Length = 122

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 34  FGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSH--PI 91
           F +T+HL+ EA+AA+ DGEL   A  RA  H+  C +C  EV+ Q      L++S+   +
Sbjct: 12  FATTDHLNPEAVAAYADGELSPLAMHRAKIHLVHCLECREEVERQRHASKRLKESNTAKV 71

Query: 92  RIPSTLFGLLTAIPRCSPDYTSPVSEPFSEGSVS-DRFVDGVAR 134
            +PS L   L  I +  PD   P +E     S S    +DG+AR
Sbjct: 72  EMPSDLRQRLMGIAQSCPD--GPCAEDIPRASESFIAKLDGIAR 113


>tr|A4F8J3|A4F8J3_SACEN Tax_Id=405948 SubName: Full=Putative
           uncharacterized protein;[Saccharopolyspora erythraea]
          Length = 242

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 29/68 (42%), Positives = 43/68 (63%)

Query: 38  EHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTL 97
           +HL+++A+ AFVDGEL  +A+ RAA H++ C  CAA+   Q + RAA++ +    I   L
Sbjct: 4   QHLALDALVAFVDGELSPSAYDRAASHLARCPACAADAAAQRQARAAVQAADTPSISPRL 63

Query: 98  FGLLTAIP 105
              L AIP
Sbjct: 64  MQALQAIP 71


>tr|C2GIW7|C2GIW7_9CORY Tax_Id=548478 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 125

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 34  FGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDS--HPI 91
           F S EHLS EA+A +VDGEL + A  RA  H+  C+ C  EV +Q      L+    + I
Sbjct: 13  FSSVEHLSAEAVAGYVDGELTLKAQKRARAHLLHCSICRKEVREQREASLTLKQETRNDI 72

Query: 92  RIPSTLFGLLTAI 104
            +PS+L   L ++
Sbjct: 73  HVPSSLVAKLASM 85


>tr|C0VTB0|C0VTB0_9CORY Tax_Id=548477 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 125

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 34  FGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDS--HPI 91
           F S EHLS EA+A +VDGEL + A  RA  H+  C+ C  EV +Q      L+    + I
Sbjct: 13  FSSVEHLSAEAVAGYVDGELTLKAQKRARAHLLHCSICRKEVREQREASLTLKQETRNDI 72

Query: 92  RIPSTLFGLLTAI 104
            +PS+L   L ++
Sbjct: 73  HVPSSLVAKLASM 85


>tr|C7MVJ6|C7MVJ6_SACVD Tax_Id=471857 SubName: Full=Putative
           uncharacterized protein;[Saccharomonospora viridis]
          Length = 295

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 28  VGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRD 87
           VG  RR+  + HL  +A+AAFVD EL + A  RAA H++ C +CAAEV  Q     A+R 
Sbjct: 3   VGKGRRWPES-HLLPDAVAAFVDQELSLGAQERAAAHLAHCPRCAAEVAAQRAASEAVRQ 61

Query: 88  SHPIRIPSTLFGLLTAIPR 106
           +    I ++    L  IP+
Sbjct: 62  ARTPSISASFLASLQRIPQ 80


>tr|C0WFJ5|C0WFJ5_9CORY Tax_Id=525260 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium accolens ATCC
           49725]
          Length = 158

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 17  PAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVD 76
           PAQ  +++ A   A RR  S  HL  EA+ AFVDGE+   A  R   H+  CA+C A+V 
Sbjct: 28  PAQAKARDKAKARA-RRSDSIGHLGPEAVVAFVDGEMEPKAMHRVRIHLVHCAECRADVH 86

Query: 77  DQSRTRAALR---DSHPIRIPSTLF----GLLTAIPRCSPDYTSPVSEP 118
            Q      +R   D   ++ P +L     G+ T      PD ++P   P
Sbjct: 87  HQRHASEWVRHCSDDSAVKAPQSLLAKLAGMATEGVAPGPDASTPAHRP 135


>tr|C8NVH0|C8NVH0_9CORY Tax_Id=585529 SubName: Full=Putative
          uncharacterized protein;[Corynebacterium genitalium
          ATCC 33030]
          Length = 99

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 25/55 (45%), Positives = 34/55 (61%)

Query: 32 RRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALR 86
          R+F S +HLS EA+AA +DGEL  +A  RA  H++ C+ C  E   Q    AA+R
Sbjct: 2  RQFDSIDHLSYEAVAALIDGELSPSATQRAHSHLAECSDCREETQRQQAAAAAVR 56


>tr|C6R8E3|C6R8E3_9CORY Tax_Id=553206 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           tuberculostearicum SK141]
          Length = 140

 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 21  ASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSR 80
           A   D      RR  +  HL  EA+ AFVDGE+      R   H+  CA+C A+V  Q  
Sbjct: 15  AKARDKAKAKARRSDTIGHLGPEAVVAFVDGEMEPKFMHRVRIHLVHCAECRADVHQQRH 74

Query: 81  TRAALR---DSHPIRIPSTLF----GLLTAIPRCSPDYTSPVSEP 118
               +R   DS  ++ P +L     G+ T      PD  +PV  P
Sbjct: 75  ASEWVRHCADSAKVKAPQSLLAKLAGIATEEVAPGPDAATPVHRP 119


>tr|C2BQL6|C2BQL6_9CORY Tax_Id=525264 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 149

 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 21  ASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSR 80
           A   D      RR  +  HL  EA+ AFVDGE+      R   H+  CA+C A+V  Q  
Sbjct: 24  AKARDKAKAMARRSDTIGHLGPEAVVAFVDGEMEPKFMHRVRIHLVHCAECRADVHQQRH 83

Query: 81  TRAALR---DSHPIRIPSTLF----GLLTAIPRCSPDYTSPVSEP 118
               +R   DS  ++ P +L     G+ T      PD  +PV  P
Sbjct: 84  ASEWVRHCADSAKVKAPQSLLAKLAGIATEEVAPGPDAATPVHRP 128


>tr|B5GQ33|B5GQ33_STRCL Tax_Id=443255 SubName: Full=Putative
           uncharacterized protein;[Streptomyces clavuligerus ATCC
           27064]
          Length = 324

 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 4/104 (3%)

Query: 38  EHLSVEAIAAFVDGELRMNAHLRAAHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTL 97
           +HL  + +AA VDGEL+ +A  R   H++ CA+C AE D Q R +     + P      L
Sbjct: 11  QHLG-DRLAALVDGELKHDARDRVLAHLATCAKCKAEADAQRRLKDVFAQAAPPPPSEGL 69

Query: 98  FGLLTAIPR--CSPDYTSPVS-EPFSEGSVSDRFVDGVAREQGK 138
              L  +P      D   P S  PF  G V D   +G     G+
Sbjct: 70  LARLQGLPAGPGGTDLGGPFSGGPFPGGPVIDAVFEGAGTPSGR 113


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.322    0.133    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 1,006,266,184
Number of extensions: 36386309
Number of successful extensions: 77981
Number of sequences better than 10.0: 125
Number of HSP's gapped: 78826
Number of HSP's successfully gapped: 125
Length of query: 139
Length of database: 3,808,957,724
Length adjustment: 103
Effective length of query: 36
Effective length of database: 2,660,166,382
Effective search space: 95765989752
Effective search space used: 95765989752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)