BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML1165
         (108 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|P53423|CLPS_MYCLE Tax_Id=1769 (clpS)RecName: Full=ATP-depende...   223   4e-57
tr|B8ZR53|B8ZR53_MYCLB Tax_Id=561304 SubName: Full=Putative unch...   223   4e-57
sp|Q73X80|CLPS_MYCPA Tax_Id=1770 (clpS)RecName: Full=ATP-depende...   186   6e-46
sp|A0QCZ8|CLPS_MYCA1 Tax_Id=243243 (clpS)RecName: Full=ATP-depen...   186   6e-46
sp|P67647|CLPS_MYCTU Tax_Id=1773 (clpS)RecName: Full=ATP-depende...   180   5e-44
sp|A5U231|CLPS_MYCTA Tax_Id=419947 (clpS)RecName: Full=ATP-depen...   180   5e-44
sp|C1AMX6|CLPS_MYCBT Tax_Id=561275 (clpS)RecName: Full=ATP-depen...   180   5e-44
sp|A1KIC1|CLPS_MYCBP Tax_Id=410289 (clpS)RecName: Full=ATP-depen...   180   5e-44
sp|P67648|CLPS_MYCBO Tax_Id=1765 (clpS)RecName: Full=ATP-depende...   180   5e-44
tr|C6DTQ4|C6DTQ4_MYCTK Tax_Id=478434 SubName: Full=Putative unch...   180   5e-44
tr|A5WM17|A5WM17_MYCTF Tax_Id=336982 SubName: Full=Putative unch...   180   5e-44
tr|A4KGQ2|A4KGQ2_MYCTU Tax_Id=395095 SubName: Full=Putative unch...   180   5e-44
tr|A2VHM2|A2VHM2_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   180   5e-44
sp|B2HQI2|CLPS_MYCMM Tax_Id=216594 (clpS)RecName: Full=ATP-depen...   165   2e-39
tr|A0R1X7|A0R1X7_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent...   163   7e-39
tr|A1TD23|A1TD23_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent...   152   9e-36
tr|Q1B576|Q1B576_MYCSS Tax_Id=164756 SubName: Full=ATP-dependent...   151   3e-35
tr|A3Q388|A3Q388_MYCSJ Tax_Id=164757 SubName: Full=ATP-dependent...   151   3e-35
tr|A1UJW1|A1UJW1_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent...   151   3e-35
tr|A4T8H0|A4T8H0_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent...   146   6e-34
tr|B1MLY4|B1MLY4_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-...   142   1e-32
tr|A0PUI1|A0PUI1_MYCUA Tax_Id=362242 SubName: Full=Putative unch...   138   2e-31
sp|C1AVW7|CLPS_RHOOB Tax_Id=632772 (clpS)RecName: Full=ATP-depen...   129   1e-28
tr|C1A1V7|C1A1V7_RHOE4 Tax_Id=234621 (clpS)SubName: Full=Putativ...   129   1e-28
sp|Q0SGS7|CLPS_RHOSR Tax_Id=101510 (clpS)RecName: Full=ATP-depen...   129   1e-28
tr|C3JU49|C3JU49_RHOER Tax_Id=596309 (clpS)SubName: Full=ATP-dep...   128   2e-28
sp|Q5Z0W0|CLPS_NOCFA Tax_Id=37329 (clpS)RecName: Full=ATP-depend...   128   2e-28
tr|A4F902|A4F902_SACEN Tax_Id=405948 SubName: Full=ATP-dependent...   122   2e-26
tr|D0L9M6|D0L9M6_9ACTO Tax_Id=526226 SubName: Full=ATP-dependent...   121   2e-26
tr|C6WNP2|C6WNP2_ACTMD Tax_Id=446462 SubName: Full=ATP-dependent...   121   2e-26
tr|C7MWD2|C7MWD2_SACVD Tax_Id=471857 SubName: Full=Uncharacteriz...   120   4e-26
tr|Q2JEP4|Q2JEP4_FRASC Tax_Id=106370 SubName: Full=ATP-dependent...   118   2e-25
tr|C2AS57|C2AS57_TSUPA Tax_Id=521096 SubName: Full=Uncharacteriz...   117   4e-25
tr|C4RAZ2|C4RAZ2_9ACTO Tax_Id=219305 SubName: Full=ATP-dependent...   116   7e-25
tr|C0U6K4|C0U6K4_9ACTO Tax_Id=526225 SubName: Full=Uncharacteriz...   116   7e-25
tr|B5GJI3|B5GJI3_9ACTO Tax_Id=465543 SubName: Full=ATP-dependent...   116   7e-25
sp|Q6NFN0|CLPS_CORDI Tax_Id=1717 (clpS)RecName: Full=ATP-depende...   115   1e-24
tr|A4X3W9|A4X3W9_SALTO Tax_Id=369723 SubName: Full=ATP-dependent...   114   3e-24
tr|C1RJ77|C1RJ77_9CELL Tax_Id=446466 SubName: Full=Uncharacteriz...   114   5e-24
tr|A0LVK3|A0LVK3_ACIC1 Tax_Id=351607 SubName: Full=ATP-dependent...   113   8e-24
tr|Q0RQM3|Q0RQM3_FRAAA Tax_Id=326424 (clpS)SubName: Full=ATP-dep...   112   1e-23
tr|B5HNV9|B5HNV9_9ACTO Tax_Id=463191 SubName: Full=ATP-dependent...   112   2e-23
sp|Q9S2G5|CLPS_STRCO Tax_Id=1902 (clpS)RecName: Full=ATP-depende...   111   2e-23
sp|Q8NMQ1|CLPS_CORGL Tax_Id=1718 (clpS)RecName: Full=ATP-depende...   111   2e-23
sp|A4QGR5|CLPS_CORGB Tax_Id=340322 (clpS)RecName: Full=ATP-depen...   111   2e-23
tr|A8M4H4|A8M4H4_SALAI Tax_Id=391037 SubName: Full=ATP-dependent...   111   2e-23
sp|Q82D28|CLPS_STRAW Tax_Id=33903 (clpS)RecName: Full=ATP-depend...   110   4e-23
sp|Q8FMT9|CLPS_COREF Tax_Id=152794 (clpS)RecName: Full=ATP-depen...   110   4e-23
tr|C5BY86|C5BY86_BEUC1 Tax_Id=471853 SubName: Full=ATP-dependent...   110   4e-23
tr|C0VU74|C0VU74_9CORY Tax_Id=548477 (clpS)SubName: Full=ATP-dep...   110   4e-23

>sp|P53423|CLPS_MYCLE Tax_Id=1769 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium leprae]
          Length = 108

 Score =  223 bits (569), Expect = 4e-57
 Identities = 107/108 (99%), Positives = 108/108 (100%)

Query: 1   VWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY 60
           +WVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY
Sbjct: 1   MWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY 60

Query: 61  SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108


>tr|B8ZR53|B8ZR53_MYCLB Tax_Id=561304 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium leprae]
          Length = 108

 Score =  223 bits (569), Expect = 4e-57
 Identities = 107/108 (99%), Positives = 108/108 (100%)

Query: 1   VWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY 60
           +WVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY
Sbjct: 1   MWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY 60

Query: 61  SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108


>sp|Q73X80|CLPS_MYCPA Tax_Id=1770 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium
           paratuberculosis]
          Length = 105

 Score =  186 bits (473), Expect = 6e-46
 Identities = 91/105 (86%), Positives = 94/105 (89%)

Query: 4   MVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEP 63
           MVV  AP EPK RP TT Q ESAP D+TA+ WVTIVWDDPVNLM YVTYVFQKLFGYSEP
Sbjct: 1   MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 60

Query: 64  HATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           HATKLMLQVHNEGKAVVS GSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  HATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 105


>sp|A0QCZ8|CLPS_MYCA1 Tax_Id=243243 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium avium]
          Length = 105

 Score =  186 bits (473), Expect = 6e-46
 Identities = 91/105 (86%), Positives = 94/105 (89%)

Query: 4   MVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEP 63
           MVV  AP EPK RP TT Q ESAP D+TA+ WVTIVWDDPVNLM YVTYVFQKLFGYSEP
Sbjct: 1   MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 60

Query: 64  HATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           HATKLMLQVHNEGKAVVS GSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  HATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 105


>sp|P67647|CLPS_MYCTU Tax_Id=1773 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium
           tuberculosis]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|A5U231|CLPS_MYCTA Tax_Id=419947 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium tuberculosis]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|C1AMX6|CLPS_MYCBT Tax_Id=561275 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium bovis]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|A1KIC1|CLPS_MYCBP Tax_Id=410289 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium bovis]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|P67648|CLPS_MYCBO Tax_Id=1765 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium bovis]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|C6DTQ4|C6DTQ4_MYCTK Tax_Id=478434 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|A5WM17|A5WM17_MYCTF Tax_Id=336982 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|A4KGQ2|A4KGQ2_MYCTU Tax_Id=395095 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|A2VHM2|A2VHM2_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 101

 Score =  180 bits (456), Expect = 5e-44
 Identities = 85/101 (84%), Positives = 90/101 (89%)

Query: 8   LAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATK 67
           +A +    +P TTWQ ESAPVD+T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 68  LMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           LMLQVHNEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|B2HQI2|CLPS_MYCMM Tax_Id=216594 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium marinum]
          Length = 101

 Score =  165 bits (417), Expect = 2e-39
 Identities = 83/105 (79%), Positives = 88/105 (83%), Gaps = 4/105 (3%)

Query: 4   MVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEP 63
           MVV  AP     +P +  Q ESA  D TA+ WVTIVWDDPVNLM YVTYVFQKLFGYSEP
Sbjct: 1   MVVASAP----AKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 56

Query: 64  HATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           HATKLMLQVHNEG+AVVS GSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 57  HATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101


>tr|A0R1X7|A0R1X7_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium
           smegmatis]
          Length = 100

 Score =  163 bits (412), Expect = 7e-39
 Identities = 80/95 (84%), Positives = 84/95 (88%)

Query: 14  KVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVH 73
           K RP T  + + A V+ T A WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATKLMLQVH
Sbjct: 6   KARPGTREEVDVASVESTEAPWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVH 65

Query: 74  NEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           NEGKAVVS GSRESMEVDVSKLHAAGLWATMQQDR
Sbjct: 66  NEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 100


>tr|A1TD23|A1TD23_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium
           vanbaalenii]
          Length = 100

 Score =  152 bits (385), Expect = 9e-36
 Identities = 74/95 (77%), Positives = 79/95 (83%)

Query: 14  KVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVH 73
           K RP T    +      T A WVTIVWDDPVNLM YVTYVFQKLFGYSEPHATKLM+QVH
Sbjct: 6   KARPGTREDRDVREDATTDAPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMMQVH 65

Query: 74  NEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           NEGKAVVS GSRESMEVDV++LHAAGLWAT+QQDR
Sbjct: 66  NEGKAVVSAGSRESMEVDVTRLHAAGLWATLQQDR 100


>tr|Q1B576|Q1B576_MYCSS Tax_Id=164756 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium sp.]
          Length = 88

 Score =  151 bits (381), Expect = 3e-35
 Identities = 73/80 (91%), Positives = 74/80 (92%)

Query: 29  DITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESM 88
           + T A WVTIVWDDPVNLM YVTYV QKLFGYSEPHATKLMLQVHNEGKAVVS GSRESM
Sbjct: 9   EATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESM 68

Query: 89  EVDVSKLHAAGLWATMQQDR 108
           EVDVSKLHAAGLWATMQQDR
Sbjct: 69  EVDVSKLHAAGLWATMQQDR 88


>tr|A3Q388|A3Q388_MYCSJ Tax_Id=164757 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium sp.]
          Length = 88

 Score =  151 bits (381), Expect = 3e-35
 Identities = 73/80 (91%), Positives = 74/80 (92%)

Query: 29  DITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESM 88
           + T A WVTIVWDDPVNLM YVTYV QKLFGYSEPHATKLMLQVHNEGKAVVS GSRESM
Sbjct: 9   EATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESM 68

Query: 89  EVDVSKLHAAGLWATMQQDR 108
           EVDVSKLHAAGLWATMQQDR
Sbjct: 69  EVDVSKLHAAGLWATMQQDR 88


>tr|A1UJW1|A1UJW1_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium sp.]
          Length = 88

 Score =  151 bits (381), Expect = 3e-35
 Identities = 73/80 (91%), Positives = 74/80 (92%)

Query: 29  DITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESM 88
           + T A WVTIVWDDPVNLM YVTYV QKLFGYSEPHATKLMLQVHNEGKAVVS GSRESM
Sbjct: 9   EATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESM 68

Query: 89  EVDVSKLHAAGLWATMQQDR 108
           EVDVSKLHAAGLWATMQQDR
Sbjct: 69  EVDVSKLHAAGLWATMQQDR 88


>tr|A4T8H0|A4T8H0_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium gilvum]
          Length = 100

 Score =  146 bits (369), Expect = 6e-34
 Identities = 71/95 (74%), Positives = 75/95 (78%)

Query: 14  KVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVH 73
           K RP T    +          WVTIVWDDPVNLM YVTYV QKLFGY+EPHATKLMLQVH
Sbjct: 6   KARPGTREDRDVGEDAAADTPWVTIVWDDPVNLMTYVTYVLQKLFGYTEPHATKLMLQVH 65

Query: 74  NEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           NEGKAVVS GSRESME DVS+LHAAGLWAT+QQDR
Sbjct: 66  NEGKAVVSAGSRESMETDVSRLHAAGLWATLQQDR 100


>tr|B1MLY4|B1MLY4_MYCA9 Tax_Id=561007 SubName: Full=Probable
           ATP-dependent Clp protease adaptor protein
           ClpS;[Mycobacterium abscessus]
          Length = 100

 Score =  142 bits (358), Expect = 1e-32
 Identities = 69/92 (75%), Positives = 76/92 (82%)

Query: 17  PNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEG 76
           P TT +     VD T + WVTIVWDDPVNLM YV YVFQ+LFGYSE  AT LMLQVH+EG
Sbjct: 9   PGTTAERSVEHVDETQSPWVTIVWDDPVNLMNYVAYVFQQLFGYSETEATNLMLQVHHEG 68

Query: 77  KAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           KAVVS G+RESME+DVSKLHAAGLWAT+QQDR
Sbjct: 69  KAVVSCGARESMEIDVSKLHAAGLWATLQQDR 100


>tr|A0PUI1|A0PUI1_MYCUA Tax_Id=362242 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium ulcerans]
          Length = 70

 Score =  138 bits (348), Expect = 2e-31
 Identities = 65/70 (92%), Positives = 68/70 (97%)

Query: 39  VWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAA 98
           +WDDPVNLM YVTYVFQKLFGYSEPHATKLMLQVHNEG+AVVS GSRE+MEVDVSKLHAA
Sbjct: 1   MWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAA 60

Query: 99  GLWATMQQDR 108
           GLWATMQQDR
Sbjct: 61  GLWATMQQDR 70


>sp|C1AVW7|CLPS_RHOOB Tax_Id=632772 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Rhodococcus opacus]
          Length = 112

 Score =  129 bits (324), Expect = 1e-28
 Identities = 66/105 (62%), Positives = 78/105 (74%), Gaps = 8/105 (7%)

Query: 6   VTLAPIEPKVRPNTTWQHESAPVDITAAR---WVTIVWDDPVNLMAYVTYVFQKLFGYSE 62
           V   P  P+V P      ES  V++  A    WVT+VWDDPVNLM YVTY+FQKLFGYS+
Sbjct: 11  VDAMPASPQVTPA-----ESEVVEVDEANDRPWVTVVWDDPVNLMHYVTYIFQKLFGYSK 65

Query: 63  PHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQD 107
             AT+LM+QVH+EGKAVVS GSR+ +E DV KLHAAGLWATMQ+D
Sbjct: 66  ARATELMMQVHSEGKAVVSSGSRDKVENDVRKLHAAGLWATMQRD 110


>tr|C1A1V7|C1A1V7_RHOE4 Tax_Id=234621 (clpS)SubName: Full=Putative
           ATP-dependent Clp protease adaptor protein
           ClpS;[Rhodococcus erythropolis]
          Length = 103

 Score =  129 bits (324), Expect = 1e-28
 Identities = 65/93 (69%), Positives = 72/93 (77%), Gaps = 2/93 (2%)

Query: 17  PNTTWQHESAPVDITAAR--WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHN 74
           P  T +   A   I AA   WVTIVWDDPVNLM YVTYVFQKLFGYS+  AT LM+QVH+
Sbjct: 9   PQATPEQSEAVATIEAADRPWVTIVWDDPVNLMHYVTYVFQKLFGYSKAKATDLMMQVHS 68

Query: 75  EGKAVVSMGSRESMEVDVSKLHAAGLWATMQQD 107
           EGKAVVS GSR+ ME DV +LHAAGLWATMQ+D
Sbjct: 69  EGKAVVSSGSRDKMEADVRRLHAAGLWATMQRD 101


>sp|Q0SGS7|CLPS_RHOSR Tax_Id=101510 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Rhodococcus sp.]
          Length = 112

 Score =  129 bits (323), Expect = 1e-28
 Identities = 67/105 (63%), Positives = 77/105 (73%), Gaps = 8/105 (7%)

Query: 6   VTLAPIEPKVRPNTTWQHESAPVDITAAR---WVTIVWDDPVNLMAYVTYVFQKLFGYSE 62
           V   P  P+V P      ES  V+I  A    WVT+VWDDPVNLM YVTY+FQKLFGYS+
Sbjct: 11  VDAMPASPQVTPA-----ESEVVEIDEANDRPWVTVVWDDPVNLMHYVTYIFQKLFGYSK 65

Query: 63  PHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQD 107
             AT+LM+QVH+EGKAVVS GSR+ +E DV KLHAAGLWATMQ D
Sbjct: 66  AKATELMMQVHSEGKAVVSSGSRDKVENDVRKLHAAGLWATMQHD 110


>tr|C3JU49|C3JU49_RHOER Tax_Id=596309 (clpS)SubName:
           Full=ATP-dependent Clp protease adaptor protein
           ClpS;[Rhodococcus erythropolis SK121]
          Length = 162

 Score =  128 bits (322), Expect = 2e-28
 Identities = 65/93 (69%), Positives = 72/93 (77%), Gaps = 2/93 (2%)

Query: 17  PNTTWQHESAPVDITAAR--WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHN 74
           P  T +   A   I AA   WVTIVWDDPVNLM YVTYVFQKLFGYS+  AT LM+QVH+
Sbjct: 68  PQATPEQSEAVSTIEAADRPWVTIVWDDPVNLMHYVTYVFQKLFGYSKAKATDLMMQVHS 127

Query: 75  EGKAVVSMGSRESMEVDVSKLHAAGLWATMQQD 107
           EGKAVVS GSR+ ME DV +LHAAGLWATMQ+D
Sbjct: 128 EGKAVVSSGSRDKMEADVRRLHAAGLWATMQRD 160


>sp|Q5Z0W0|CLPS_NOCFA Tax_Id=37329 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Nocardia farcinica]
          Length = 106

 Score =  128 bits (321), Expect = 2e-28
 Identities = 59/73 (80%), Positives = 66/73 (90%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVT+VWDDPVNLM YVTY+FQKLFGYS+  AT+LMLQVHNEGKAVVS GSR+ ME DV +
Sbjct: 33  WVTVVWDDPVNLMHYVTYIFQKLFGYSKAKATELMLQVHNEGKAVVSSGSRDKMEHDVRR 92

Query: 95  LHAAGLWATMQQD 107
           LHAAGLWATMQ+D
Sbjct: 93  LHAAGLWATMQRD 105


>tr|A4F902|A4F902_SACEN Tax_Id=405948 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Saccharopolyspora
           erythraea]
          Length = 97

 Score =  122 bits (305), Expect = 2e-26
 Identities = 54/73 (73%), Positives = 66/73 (90%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVT+VW+DPVNLM+YVTYV QK+FGYS+ HATKLML VH++G+A VS GS+E +E DV+K
Sbjct: 24  WVTVVWNDPVNLMSYVTYVLQKIFGYSKDHATKLMLDVHHKGRAAVSSGSKEKVEGDVAK 83

Query: 95  LHAAGLWATMQQD 107
           LHAAGLWATMQ+D
Sbjct: 84  LHAAGLWATMQKD 96


>tr|D0L9M6|D0L9M6_9ACTO Tax_Id=526226 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Gordonia bronchialis
           DSM 43247]
          Length = 112

 Score =  121 bits (304), Expect = 2e-26
 Identities = 55/73 (75%), Positives = 63/73 (86%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           W+TIVWDDPVNLM YVT+VFQK+FGYSE  A +LM+QVH EGKAVVS G R+ +E DV K
Sbjct: 39  WMTIVWDDPVNLMRYVTFVFQKIFGYSESKANQLMMQVHTEGKAVVSSGDRDKVETDVRK 98

Query: 95  LHAAGLWATMQQD 107
           LHAAGLWATMQ+D
Sbjct: 99  LHAAGLWATMQRD 111


>tr|C6WNP2|C6WNP2_ACTMD Tax_Id=446462 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Actinosynnema mirum]
          Length = 99

 Score =  121 bits (304), Expect = 2e-26
 Identities = 57/97 (58%), Positives = 75/97 (77%), Gaps = 3/97 (3%)

Query: 10  PIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLM 69
           P+E +         E A  D   + W+T+VW+DPVNLM+YVTYVFQK+FGYS+ HATKLM
Sbjct: 4   PVEQERTQAEPVAEEGASAD---SPWMTLVWNDPVNLMSYVTYVFQKVFGYSKDHATKLM 60

Query: 70  LQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQ 106
           + VH++G+AVVS G+++ ME DV+KLHAAGLWATMQ+
Sbjct: 61  MDVHHKGRAVVSSGAKDKMEADVAKLHAAGLWATMQR 97


>tr|C7MWD2|C7MWD2_SACVD Tax_Id=471857 SubName: Full=Uncharacterized
           conserved protein;[Saccharomonospora viridis]
          Length = 94

 Score =  120 bits (302), Expect = 4e-26
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           W TIVW+DPVNLM+YVTYVFQK+FGYS+ HATKLML VH++G+AVVS G++E +E DV+K
Sbjct: 22  WQTIVWNDPVNLMSYVTYVFQKIFGYSKEHATKLMLDVHHKGRAVVSSGTKEKVEGDVAK 81

Query: 95  LHAAGLWATMQQ 106
           LHAAGLWATM+Q
Sbjct: 82  LHAAGLWATMEQ 93


>tr|Q2JEP4|Q2JEP4_FRASC Tax_Id=106370 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Frankia sp.]
          Length = 119

 Score =  118 bits (296), Expect = 2e-25
 Identities = 52/73 (71%), Positives = 64/73 (87%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVTIVW+DP+NLM+YVTYVFQKLFGYS+P ATKLML VH++G+A V++G+RE ME D  +
Sbjct: 47  WVTIVWNDPINLMSYVTYVFQKLFGYSKPKATKLMLDVHHKGRASVAVGTREEMEADAER 106

Query: 95  LHAAGLWATMQQD 107
           LHA GLWAT+ QD
Sbjct: 107 LHAYGLWATIAQD 119


>tr|C2AS57|C2AS57_TSUPA Tax_Id=521096 SubName: Full=Uncharacterized
           conserved protein, COG2127;[Tsukamurella paurometabola
           DSM 20162]
          Length = 109

 Score =  117 bits (293), Expect = 4e-25
 Identities = 53/73 (72%), Positives = 63/73 (86%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVT+VWDDPVNLM+YVT+VF+K+FGYS   A +LM+QVH EGKAVVS G R+ +E DV K
Sbjct: 36  WVTVVWDDPVNLMSYVTFVFRKVFGYSTSKAKELMMQVHTEGKAVVSTGDRDKVEGDVRK 95

Query: 95  LHAAGLWATMQQD 107
           LHAAGLWATMQ+D
Sbjct: 96  LHAAGLWATMQRD 108


>tr|C4RAZ2|C4RAZ2_9ACTO Tax_Id=219305 SubName: Full=ATP-dependent
           Clp protease adaptor protein clpS;[Micromonospora sp.
           ATCC 39149]
          Length = 96

 Score =  116 bits (291), Expect = 7e-25
 Identities = 58/94 (61%), Positives = 71/94 (75%), Gaps = 2/94 (2%)

Query: 13  PKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQV 72
           P+V P  T   E  PV  +   WVTIVWDDPVNLM+YVT+VFQKLFGYS   A KLML V
Sbjct: 4   PQVAPVETPDTEEVPV--SDRPWVTIVWDDPVNLMSYVTWVFQKLFGYSRERAEKLMLDV 61

Query: 73  HNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQ 106
           H++G+AVVS G+RE ME D ++LHA GLWAT+++
Sbjct: 62  HHKGRAVVSTGARERMEHDAAQLHAYGLWATVER 95


>tr|C0U6K4|C0U6K4_9ACTO Tax_Id=526225 SubName: Full=Uncharacterized
           conserved protein, COG2127;[Geodermatophilus obscurus
           DSM 43160]
          Length = 98

 Score =  116 bits (291), Expect = 7e-25
 Identities = 60/98 (61%), Positives = 69/98 (70%), Gaps = 4/98 (4%)

Query: 10  PIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLM 69
           P+ P   P  T + E   +D     WVTIVW+DPVNLM YVTYV Q+LFGY EP AT LM
Sbjct: 4   PLAPTRTPEETVE-EHGDLD---RPWVTIVWNDPVNLMTYVTYVLQELFGYDEPTATTLM 59

Query: 70  LQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQD 107
           LQVH EGKA+VS G RE ME D S+LHA GLWA+ Q+D
Sbjct: 60  LQVHEEGKAIVSSGPRERMEHDTSRLHAYGLWASYQRD 97


>tr|B5GJI3|B5GJI3_9ACTO Tax_Id=465543 SubName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces sp.
           SPB74]
          Length = 102

 Score =  116 bits (291), Expect = 7e-25
 Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 3/104 (2%)

Query: 5   VVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPH 64
           + T AP+E + RP+   + ES+ V      W+T+V +DPVNLM+YVTYVFQ  FGYS+  
Sbjct: 1   MATPAPMEVE-RPDA--EAESSVVTEPDLLWITLVHNDPVNLMSYVTYVFQSYFGYSKDK 57

Query: 65  ATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108
           ATKLML VHN+G+AVVS GSRE ME DV  +H  GLWAT+QQDR
Sbjct: 58  ATKLMLDVHNKGRAVVSSGSREEMERDVQAMHGYGLWATLQQDR 101


>sp|Q6NFN0|CLPS_CORDI Tax_Id=1717 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Corynebacterium
           diphtheriae]
          Length = 113

 Score =  115 bits (289), Expect = 1e-24
 Identities = 52/72 (72%), Positives = 60/72 (83%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           W+ IVWDDPVNLM+YVTYVFQ + GYS+  AT+LM+QVH EGKAVVS G R+ +E DV K
Sbjct: 40  WMCIVWDDPVNLMSYVTYVFQTILGYSKKRATELMMQVHTEGKAVVSSGERDKVEADVKK 99

Query: 95  LHAAGLWATMQQ 106
           LH AGLWATMQQ
Sbjct: 100 LHTAGLWATMQQ 111


>tr|A4X3W9|A4X3W9_SALTO Tax_Id=369723 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Salinispora tropica]
          Length = 96

 Score =  114 bits (285), Expect = 3e-24
 Identities = 58/94 (61%), Positives = 68/94 (72%), Gaps = 2/94 (2%)

Query: 13  PKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQV 72
           P+V P  T   +  P       WVTIVWDDPVNLMAYVT+VFQKLFGYS   A +LML V
Sbjct: 4   PQVAPAETPDTDEVPAPDRP--WVTIVWDDPVNLMAYVTWVFQKLFGYSRGRAEQLMLDV 61

Query: 73  HNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQ 106
           H++GKAVVS G+RE ME D S+LHA GLWAT+ +
Sbjct: 62  HHKGKAVVSSGTRERMEHDASQLHAYGLWATVDR 95


>tr|C1RJ77|C1RJ77_9CELL Tax_Id=446466 SubName: Full=Uncharacterized
           conserved protein, COG2127;[Cellulomonas flavigena DSM
           20109]
          Length = 100

 Score =  114 bits (284), Expect = 5e-24
 Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 6/103 (5%)

Query: 4   MVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEP 63
           MVV  A   P  RP+            TA  WVTIVW+DPVNLM YVTYVFQ  FGY+  
Sbjct: 1   MVVVPATTAPDTRPDVD------EASSTADAWVTIVWNDPVNLMTYVTYVFQTHFGYARE 54

Query: 64  HATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQ 106
            A +LM QVH EG+AVVS G+RE+MEVDV  +H+ GLWAT+Q+
Sbjct: 55  KAERLMRQVHEEGRAVVSTGNREAMEVDVQAMHSYGLWATLQR 97


>tr|A0LVK3|A0LVK3_ACIC1 Tax_Id=351607 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Acidothermus
           cellulolyticus]
          Length = 96

 Score =  113 bits (282), Expect = 8e-24
 Identities = 53/72 (73%), Positives = 61/72 (84%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVTIVW+DPVNLM+YVTYVFQKLFGY +  A KLMLQVH EGKAVVS G RE ME D ++
Sbjct: 24  WVTIVWNDPVNLMSYVTYVFQKLFGYPKEKAEKLMLQVHYEGKAVVSTGRREQMENDAAR 83

Query: 95  LHAAGLWATMQQ 106
           LHA GLWAT+++
Sbjct: 84  LHAHGLWATVRR 95


>tr|Q0RQM3|Q0RQM3_FRAAA Tax_Id=326424 (clpS)SubName:
           Full=ATP-dependent Clp protease adaptor protein
           clpS;[Frankia alni]
          Length = 91

 Score =  112 bits (281), Expect = 1e-23
 Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 8/90 (8%)

Query: 26  APVDITAAR--------WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGK 77
           +PVD+  A         WVTIVW+DP+NLM+YVTYVFQKLFGY++  AT+LML VH++G+
Sbjct: 2   SPVDVEEADETLDDDRPWVTIVWNDPINLMSYVTYVFQKLFGYTKSKATELMLDVHHKGR 61

Query: 78  AVVSMGSRESMEVDVSKLHAAGLWATMQQD 107
           A V+ G+RE ME D  +LHA GLWAT+ QD
Sbjct: 62  ASVATGTREEMEADAERLHAYGLWATIAQD 91


>tr|B5HNV9|B5HNV9_9ACTO Tax_Id=463191 SubName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces sviceus
           ATCC 29083]
          Length = 105

 Score =  112 bits (279), Expect = 2e-23
 Identities = 53/74 (71%), Positives = 61/74 (82%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVTIV +DPVNLM+YVTYVFQ  FGYS+  ATKLML VH++G+AVVS GSRE ME DV  
Sbjct: 31  WVTIVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGSREEMERDVQA 90

Query: 95  LHAAGLWATMQQDR 108
           +H  GLWAT+QQDR
Sbjct: 91  MHGYGLWATLQQDR 104


>sp|Q9S2G5|CLPS_STRCO Tax_Id=1902 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces
           coelicolor]
          Length = 96

 Score =  111 bits (278), Expect = 2e-23
 Identities = 52/74 (70%), Positives = 61/74 (82%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVTIV +DPVNLM+YVTYVFQ  FGYS+  ATKLM+ VH++G+AVVS GSRE ME DV  
Sbjct: 22  WVTIVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMMDVHHKGRAVVSSGSREEMERDVQA 81

Query: 95  LHAAGLWATMQQDR 108
           +H  GLWAT+QQDR
Sbjct: 82  MHGYGLWATLQQDR 95


>sp|Q8NMQ1|CLPS_CORGL Tax_Id=1718 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Corynebacterium
           glutamicum]
          Length = 100

 Score =  111 bits (278), Expect = 2e-23
 Identities = 50/72 (69%), Positives = 60/72 (83%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           W+ IVWDDPVNLM+YVTYVFQ + G+S+  AT+LM+QVH EGKAVVS G ++ +E DV K
Sbjct: 27  WLCIVWDDPVNLMSYVTYVFQTVLGFSKKRATELMMQVHTEGKAVVSSGEKDKVEGDVKK 86

Query: 95  LHAAGLWATMQQ 106
           LH AGLWATMQQ
Sbjct: 87  LHTAGLWATMQQ 98


>sp|A4QGR5|CLPS_CORGB Tax_Id=340322 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Corynebacterium glutamicum]
          Length = 100

 Score =  111 bits (278), Expect = 2e-23
 Identities = 50/72 (69%), Positives = 60/72 (83%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           W+ IVWDDPVNLM+YVTYVFQ + G+S+  AT+LM+QVH EGKAVVS G ++ +E DV K
Sbjct: 27  WLCIVWDDPVNLMSYVTYVFQTVLGFSKKRATELMMQVHTEGKAVVSSGEKDKVEGDVKK 86

Query: 95  LHAAGLWATMQQ 106
           LH AGLWATMQQ
Sbjct: 87  LHTAGLWATMQQ 98


>tr|A8M4H4|A8M4H4_SALAI Tax_Id=391037 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Salinispora
           arenicola]
          Length = 96

 Score =  111 bits (278), Expect = 2e-23
 Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 2/94 (2%)

Query: 13  PKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQV 72
           P+V P  T   +  P       WVTIVWDDPVNLM YVT+VFQKLFGYS   A +LML V
Sbjct: 4   PQVAPLETPDTDEVPAPDRP--WVTIVWDDPVNLMTYVTWVFQKLFGYSRERAEQLMLDV 61

Query: 73  HNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQ 106
           H++G+AVV+ GSRE ME D S+LHA GLWAT+ +
Sbjct: 62  HHKGRAVVTSGSRERMEHDASQLHAYGLWATVDR 95


>sp|Q82D28|CLPS_STRAW Tax_Id=33903 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces
           avermitilis]
          Length = 105

 Score =  110 bits (276), Expect = 4e-23
 Identities = 52/74 (70%), Positives = 61/74 (82%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           WVTIV +DPVNLM+YVTYVFQ  FGYS+  ATKLML VH++G+AVVS G+RE ME DV  
Sbjct: 31  WVTIVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGTREEMERDVQA 90

Query: 95  LHAAGLWATMQQDR 108
           +H  GLWAT+QQDR
Sbjct: 91  MHGYGLWATLQQDR 104


>sp|Q8FMT9|CLPS_COREF Tax_Id=152794 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Corynebacterium efficiens]
          Length = 101

 Score =  110 bits (276), Expect = 4e-23
 Identities = 50/72 (69%), Positives = 58/72 (80%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           W+ IVWDDPVNLM+YVTYVFQ + GYS   A +LM+QVH EGKAVVS G ++ +E DV K
Sbjct: 28  WLCIVWDDPVNLMSYVTYVFQTVLGYSRKRANELMMQVHTEGKAVVSSGEKDKVEGDVKK 87

Query: 95  LHAAGLWATMQQ 106
           LH AGLWATMQQ
Sbjct: 88  LHVAGLWATMQQ 99


>tr|C5BY86|C5BY86_BEUC1 Tax_Id=471853 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Beutenbergia
           cavernae]
          Length = 113

 Score =  110 bits (276), Expect = 4e-23
 Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 6/105 (5%)

Query: 4   MVVTLAPIEPKVRPNTTWQHESAPVDITAAR-WVTIVWDDPVNLMAYVTYVFQKLFGYSE 62
           +V + +P+ P     T  Q  +    +   R W TIVW+DPVNLM+YVTYVFQ  FGYS 
Sbjct: 12  VVASTSPVSP-----TPTQERAGETAVRHDRPWHTIVWNDPVNLMSYVTYVFQTYFGYSR 66

Query: 63  PHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQD 107
             A KLM QVH EGK++VS GSRE MEVDV  +H+ GLWAT+ QD
Sbjct: 67  AKAEKLMRQVHTEGKSIVSHGSRERMEVDVQAMHSYGLWATLGQD 111


>tr|C0VU74|C0VU74_9CORY Tax_Id=548477 (clpS)SubName:
           Full=ATP-dependent Clp protease adaptor protein
           ClpS;[Corynebacterium glucuronolyticum ATCC 51867]
          Length = 100

 Score =  110 bits (276), Expect = 4e-23
 Identities = 49/72 (68%), Positives = 58/72 (80%)

Query: 35  WVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSK 94
           W+ IVWDDPVNLM+YVT+VF  + GYS   AT+LM+QVH EGKAVVS G R+ +E DV K
Sbjct: 27  WMCIVWDDPVNLMSYVTHVFMTMLGYSRKRATELMMQVHTEGKAVVSSGERDKVEADVKK 86

Query: 95  LHAAGLWATMQQ 106
           +H AGLWATMQQ
Sbjct: 87  MHTAGLWATMQQ 98


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.319    0.129    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 799,734,367
Number of extensions: 27367687
Number of successful extensions: 55173
Number of sequences better than 10.0: 743
Number of HSP's gapped: 55624
Number of HSP's successfully gapped: 743
Length of query: 108
Length of database: 3,808,957,724
Length adjustment: 76
Effective length of query: 32
Effective length of database: 2,961,305,860
Effective search space: 94761787520
Effective search space used: 94761787520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)