BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML1174 (259 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P37939|RNPH_MYCLE Tax_Id=1769 (rph)RecName: Full=Ribonuclease... 510 e-143 sp|B8ZR59|RNPH_MYCLB Tax_Id=561304 (rph)RecName: Full=Ribonuclea... 510 e-143 sp|Q73X87|RNPH_MYCPA Tax_Id=1770 (rph)RecName: Full=Ribonuclease... 469 e-130 sp|A0QD04|RNPH_MYCA1 Tax_Id=243243 (rph)RecName: Full=Ribonuclea... 468 e-130 tr|B2HQF7|B2HQF7_MYCMM Tax_Id=216594 (rphA)SubName: Full=Ribonuc... 464 e-129 sp|Q10628|RNPH_MYCTU Tax_Id=1773 (rph)RecName: Full=Ribonuclease... 462 e-128 sp|A5U240|RNPH_MYCTA Tax_Id=419947 (rph)RecName: Full=Ribonuclea... 462 e-128 sp|C1AMY5|RNPH_MYCBT Tax_Id=561275 (rph)RecName: Full=Ribonuclea... 462 e-128 sp|A1KID0|RNPH_MYCBP Tax_Id=410289 (rph)RecName: Full=Ribonuclea... 462 e-128 tr|C6DTP5|C6DTP5_MYCTK Tax_Id=478434 SubName: Full=Ribonuclease ... 462 e-128 tr|A5WM24|A5WM24_MYCTF Tax_Id=336982 SubName: Full=Ribonuclease ... 462 e-128 tr|A4KGR0|A4KGR0_MYCTU Tax_Id=395095 SubName: Full=Ribonuclease ... 462 e-128 sp|Q7U076|RNPH_MYCBO Tax_Id=1765 (rph)RecName: Full=Ribonuclease... 459 e-127 sp|A0PUG0|RNPH_MYCUA Tax_Id=362242 (rph)RecName: Full=Ribonuclea... 456 e-127 sp|A0R1W8|RNPH_MYCS2 Tax_Id=246196 (rph)RecName: Full=Ribonuclea... 444 e-123 sp|A1TD14|RNPH_MYCVP Tax_Id=350058 (rph)RecName: Full=Ribonuclea... 434 e-120 sp|Q1B585|RNPH_MYCSS Tax_Id=164756 (rph)RecName: Full=Ribonuclea... 432 e-119 sp|A1UJV2|RNPH_MYCSK Tax_Id=189918 (rph)RecName: Full=Ribonuclea... 432 e-119 sp|A3Q379|RNPH_MYCSJ Tax_Id=164757 (rph)RecName: Full=Ribonuclea... 432 e-119 sp|A4T8F7|RNPH_MYCGI Tax_Id=350054 (rph)RecName: Full=Ribonuclea... 429 e-118 sp|B1MLZ3|RNPH_MYCA9 Tax_Id=561007 (rph)RecName: Full=Ribonuclea... 426 e-117 sp|Q5Z0V1|RNPH_NOCFA Tax_Id=37329 (rph)RecName: Full=Ribonucleas... 419 e-115 sp|C1A1V2|RNPH_RHOE4 Tax_Id=234621 (rph)RecName: Full=Ribonuclea... 417 e-115 tr|C3JU54|C3JU54_RHOER Tax_Id=596309 (rph)SubName: Full=Ribonucl... 417 e-115 tr|Q0SGT5|Q0SGT5_RHOSR Tax_Id=101510 SubName: Full=tRNA nucleoti... 412 e-113 tr|C1AVV8|C1AVV8_RHOOB Tax_Id=632772 (rph)SubName: Full=Ribonucl... 412 e-113 tr|C2AS65|C2AS65_TSUPA Tax_Id=521096 SubName: Full=RNAse PH; EC=... 398 e-109 tr|D0L9N7|D0L9N7_9ACTO Tax_Id=526226 SubName: Full=Ribonuclease ... 394 e-108 tr|C6WNQ7|C6WNQ7_ACTMD Tax_Id=446462 SubName: Full=Ribonuclease ... 387 e-106 sp|A4F913|RNPH_SACEN Tax_Id=405948 (rph)RecName: Full=Ribonuclea... 384 e-105 tr|C7MWC0|C7MWC0_SACVD Tax_Id=471857 SubName: Full=RNAse PH; EC=... 384 e-105 tr|C8XFY0|C8XFY0_NAKMY Tax_Id=479431 SubName: Full=Ribonuclease ... 364 5e-99 tr|C0U6J3|C0U6J3_9ACTO Tax_Id=526225 SubName: Full=RNAse PH; EC=... 319 2e-85 sp|A8M4I1|RNPH_SALAI Tax_Id=391037 (rph)RecName: Full=Ribonuclea... 313 1e-83 sp|A4X3X5|RNPH_SALTO Tax_Id=369723 (rph)RecName: Full=Ribonuclea... 311 3e-83 tr|C4RAZ9|C4RAZ9_9ACTO Tax_Id=219305 SubName: Full=Ribonuclease ... 310 1e-82 tr|C8NSW3|C8NSW3_9CORY Tax_Id=585529 (rph)SubName: Full=tRNA nuc... 310 1e-82 tr|Q4JX02|Q4JX02_CORJK Tax_Id=306537 (rphA)SubName: Full=Ribonuc... 308 3e-82 sp|C4LJY5|RNPH_CORK4 Tax_Id=645127 (rph)RecName: Full=Ribonuclea... 308 5e-82 tr|C8RVS0|C8RVS0_CORJE Tax_Id=525262 (rph)SubName: Full=tRNA nuc... 306 1e-81 sp|A1SGA2|RNPH_NOCSJ Tax_Id=196162 (rph)RecName: Full=Ribonuclea... 306 2e-81 tr|C0XRA4|C0XRA4_9CORY Tax_Id=525263 (rph)SubName: Full=Ribonucl... 305 2e-81 tr|C6R803|C6R803_9CORY Tax_Id=553206 (rph)SubName: Full=tRNA nuc... 303 2e-80 tr|A6WEI7|A6WEI7_KINRD Tax_Id=266940 SubName: Full=Ribonuclease ... 302 2e-80 tr|C5VAM8|C5VAM8_9CORY Tax_Id=553207 (rph)SubName: Full=tRNA nuc... 302 2e-80 tr|C3PIN6|C3PIN6_CORA7 Tax_Id=548476 (rphA)SubName: Full=Ribonuc... 302 3e-80 tr|C2BMM9|C2BMM9_9CORY Tax_Id=525264 (rph)SubName: Full=Ribonucl... 302 3e-80 sp|A8L766|RNPH_FRASN Tax_Id=298653 (rph)RecName: Full=Ribonuclea... 301 6e-80 tr|C0E3N5|C0E3N5_9CORY Tax_Id=566549 SubName: Full=Putative unch... 300 8e-80 tr|C2CLJ1|C2CLJ1_CORST Tax_Id=525268 (rph)SubName: Full=Ribonucl... 299 2e-79 >sp|P37939|RNPH_MYCLE Tax_Id=1769 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium leprae] Length = 259 Score = 510 bits (1314), Expect = e-143 Identities = 258/259 (99%), Positives = 259/259 (100%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +STRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW Sbjct: 1 MSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV Sbjct: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY Sbjct: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA Sbjct: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPYQGMSPEGPPPPKAFGS Sbjct: 241 LPYQGMSPEGPPPPKAFGS 259 >sp|B8ZR59|RNPH_MYCLB Tax_Id=561304 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium leprae] Length = 259 Score = 510 bits (1314), Expect = e-143 Identities = 258/259 (99%), Positives = 259/259 (100%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +STRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW Sbjct: 1 MSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV Sbjct: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY Sbjct: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA Sbjct: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPYQGMSPEGPPPPKAFGS Sbjct: 241 LPYQGMSPEGPPPPKAFGS 259 >sp|Q73X87|RNPH_MYCPA Tax_Id=1770 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium paratuberculosis] Length = 259 Score = 469 bits (1208), Expect = e-130 Identities = 234/259 (90%), Positives = 246/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 ++ R DGRLDDELR +VITRGFTEHPAGSVLIEFGHTKVMCTAS TEGVPRWRKGSG GW Sbjct: 1 MTRREDGRLDDELRPLVITRGFTEHPAGSVLIEFGHTKVMCTASVTEGVPRWRKGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATHTRS+RESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV Sbjct: 61 LTAEYAMLPSATHTRSDRESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGA+VALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAFVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EED+RAEVDMNV+ATDTGTLVE+QGTGEGATFPRSTLDKLLD AL ACDKLF AQR+AL Sbjct: 181 EEDARAEVDMNVVATDTGTLVEVQGTGEGATFPRSTLDKLLDAALAACDKLFAAQREALK 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ PEGPPPPKAFGS Sbjct: 241 LPYPGVLPEGPPPPKAFGS 259 >sp|A0QD04|RNPH_MYCA1 Tax_Id=243243 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium avium] Length = 259 Score = 468 bits (1204), Expect = e-130 Identities = 233/259 (89%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 ++ R DGRLDDELR +VITRGFTEHPAGSVLIEFGHTKVMCTAS TEGVPRWRKGSG GW Sbjct: 1 MTRREDGRLDDELRPLVITRGFTEHPAGSVLIEFGHTKVMCTASVTEGVPRWRKGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATHTRS+RESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV Sbjct: 61 LTAEYAMLPSATHTRSDRESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGA+VALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAFVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EED+RAEVDMNV+ATDTGTLVE+QGTGEGATFPRSTLDKLLD AL ACDKLF AQR+AL Sbjct: 181 EEDARAEVDMNVVATDTGTLVEVQGTGEGATFPRSTLDKLLDAALAACDKLFAAQREALK 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ PEGPPPPK FGS Sbjct: 241 LPYPGVLPEGPPPPKVFGS 259 >tr|B2HQF7|B2HQF7_MYCMM Tax_Id=216594 (rphA)SubName: Full=Ribonuclease RphA;[Mycobacterium marinum] Length = 276 Score = 464 bits (1193), Expect = e-129 Identities = 232/259 (89%), Positives = 243/259 (93%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 VS R DGR DDELR VVITRGFTE+PAGSVLIEFG TKVMCTAS TEGVPRWRKGSG GW Sbjct: 18 VSKREDGRRDDELRPVVITRGFTENPAGSVLIEFGRTKVMCTASVTEGVPRWRKGSGLGW 77 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATHTRS+RESVKGR+ GRTQEISRL+GRSLRACIDLAALGENTIAVDCDV Sbjct: 78 LTAEYAMLPSATHTRSDRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAVDCDV 137 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAV YL+AAG+L DPRPLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 138 LQADGGTRTAAITGAYVALADAVNYLAAAGKLSDPRPLSCAIAAVSVGVVDGRVRVDLPY 197 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVE+QGTGEGATFPRSTLDKLLDMALGACD LF AQRDALA Sbjct: 198 EEDSRAEVDMNVVATDTGTLVEVQGTGEGATFPRSTLDKLLDMALGACDTLFAAQRDALA 257 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ PEGPPP KAFGS Sbjct: 258 LPYPGVLPEGPPPSKAFGS 276 >sp|Q10628|RNPH_MYCTU Tax_Id=1773 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium tuberculosis] Length = 259 Score = 462 bits (1188), Expect = e-128 Identities = 230/259 (88%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >sp|A5U240|RNPH_MYCTA Tax_Id=419947 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium tuberculosis] Length = 259 Score = 462 bits (1188), Expect = e-128 Identities = 230/259 (88%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >sp|C1AMY5|RNPH_MYCBT Tax_Id=561275 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium bovis] Length = 259 Score = 462 bits (1188), Expect = e-128 Identities = 230/259 (88%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >sp|A1KID0|RNPH_MYCBP Tax_Id=410289 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium bovis] Length = 259 Score = 462 bits (1188), Expect = e-128 Identities = 230/259 (88%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >tr|C6DTP5|C6DTP5_MYCTK Tax_Id=478434 SubName: Full=Ribonuclease rphA;[Mycobacterium tuberculosis] Length = 259 Score = 462 bits (1188), Expect = e-128 Identities = 230/259 (88%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >tr|A5WM24|A5WM24_MYCTF Tax_Id=336982 SubName: Full=Ribonuclease rphA (RNase ph);[Mycobacterium tuberculosis] Length = 259 Score = 462 bits (1188), Expect = e-128 Identities = 230/259 (88%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >tr|A4KGR0|A4KGR0_MYCTU Tax_Id=395095 SubName: Full=Ribonuclease rphA (RNase ph);[Mycobacterium tuberculosis str. Haarlem] Length = 259 Score = 462 bits (1188), Expect = e-128 Identities = 230/259 (88%), Positives = 245/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >sp|Q7U076|RNPH_MYCBO Tax_Id=1765 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium bovis] Length = 259 Score = 459 bits (1182), Expect = e-127 Identities = 229/259 (88%), Positives = 244/259 (94%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLD ELR V+ITRGFTE+PAGSVLIEFGHTKV+CTAS TEGVPRWRK +G GW Sbjct: 1 MSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATH+RS+RESV+GRLSGRTQEISRLI RSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPSATHSRSDRESVRGRLSGRTQEISRLISRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYLSAAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATF RSTLDKLLDMALGACD LF AQRDALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+GPPPPKAFG+ Sbjct: 241 LPYPGVLPQGPPPPKAFGT 259 >sp|A0PUG0|RNPH_MYCUA Tax_Id=362242 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium ulcerans] Length = 259 Score = 456 bits (1174), Expect = e-127 Identities = 229/259 (88%), Positives = 241/259 (93%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGR DDELR VVITRGFTE+PAGSVLIEFG TKVMCTAS TEGV RWRKGSG GW Sbjct: 1 MSKREDGRRDDELRPVVITRGFTENPAGSVLIEFGRTKVMCTASVTEGVSRWRKGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLPSATHTRS+RESVKGR+ GRTQEISRL+GRSLRACIDLAALGENTIAVDCDV Sbjct: 61 LTAEYAMLPSATHTRSDRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAVDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAV YL+AAG+L DPRPLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVNYLAAAGKLSDPRPLSCAIAAVSVGVVDGRVRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVE+QGTGEGATFPRSTLDKLLDMALGACD LF AQ DALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEVQGTGEGATFPRSTLDKLLDMALGACDTLFAAQCDALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ PEGPPP KAFGS Sbjct: 241 LPYPGVLPEGPPPSKAFGS 259 >sp|A0R1W8|RNPH_MYCS2 Tax_Id=246196 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium smegmatis] Length = 259 Score = 444 bits (1141), Expect = e-123 Identities = 220/259 (84%), Positives = 239/259 (92%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLDDELR VVITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKGSG+GW Sbjct: 1 MSRREDGRLDDELRPVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATH RS+RESVKGR+ GRTQEISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHDRSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVAL+DAVT+L+AAGRL DPRPLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSVGVVDGRVRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDK+LD ALGA ++LFV QR+AL Sbjct: 181 SEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALD 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 PY G+ PEGP P KAFGS Sbjct: 241 APYPGVLPEGPAPKKAFGS 259 >sp|A1TD14|RNPH_MYCVP Tax_Id=350058 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium vanbaalenii] Length = 260 Score = 434 bits (1117), Expect = e-120 Identities = 219/260 (84%), Positives = 235/260 (90%), Gaps = 1/260 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLDDELR V ITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKGSG+GW Sbjct: 1 MSRREDGRLDDELRPVTITRGFTTHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATH RS RESVKGR+ GRTQEISRL+GRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHERSGRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYL+AAG+L DPRPLSCAIAAVSVGVVDGRIRVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLAAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDK+LD A+ ACD+LF QR AL Sbjct: 181 TEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKMLDAAMAACDQLFEIQRAALE 240 Query: 241 LPYQGMSPE-GPPPPKAFGS 259 LPY G+ PE G P KAFGS Sbjct: 241 LPYPGVLPEPGEPAKKAFGS 260 >sp|Q1B585|RNPH_MYCSS Tax_Id=164756 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium sp.] Length = 260 Score = 432 bits (1110), Expect = e-119 Identities = 217/260 (83%), Positives = 235/260 (90%), Gaps = 1/260 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLDDELR V ITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKG+G+GW Sbjct: 1 MSRREDGRLDDELRPVRITRGFTSHPAGSVLVEFGETRVMCTASVTEGVPRWRKGTGQGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATH RS+RESVKGR+ GRTQEISRLIGRSLRACIDL ALGENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHDRSDRESVKGRVGGRTQEISRLIGRSLRACIDLNALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYL+AA +L DPRPLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLAAAEKLSDPRPLSCAIAAVSVGVVDGRVRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD+AL +CD+LFV QR+AL Sbjct: 181 SEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDLALASCDQLFVVQREALD 240 Query: 241 LPYQGMSPE-GPPPPKAFGS 259 PY G PE PP KAFGS Sbjct: 241 APYPGALPEPTSPPKKAFGS 260 >sp|A1UJV2|RNPH_MYCSK Tax_Id=189918 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium sp.] Length = 260 Score = 432 bits (1110), Expect = e-119 Identities = 217/260 (83%), Positives = 235/260 (90%), Gaps = 1/260 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLDDELR V ITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKG+G+GW Sbjct: 1 MSRREDGRLDDELRPVRITRGFTSHPAGSVLVEFGETRVMCTASVTEGVPRWRKGTGQGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATH RS+RESVKGR+ GRTQEISRLIGRSLRACIDL ALGENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHDRSDRESVKGRVGGRTQEISRLIGRSLRACIDLNALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYL+AA +L DPRPLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLAAAEKLSDPRPLSCAIAAVSVGVVDGRVRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD+AL +CD+LFV QR+AL Sbjct: 181 SEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDLALASCDQLFVVQREALD 240 Query: 241 LPYQGMSPE-GPPPPKAFGS 259 PY G PE PP KAFGS Sbjct: 241 APYPGALPEPTSPPKKAFGS 260 >sp|A3Q379|RNPH_MYCSJ Tax_Id=164757 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium sp.] Length = 260 Score = 432 bits (1110), Expect = e-119 Identities = 217/260 (83%), Positives = 235/260 (90%), Gaps = 1/260 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLDDELR V ITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKG+G+GW Sbjct: 1 MSRREDGRLDDELRPVRITRGFTSHPAGSVLVEFGETRVMCTASVTEGVPRWRKGTGQGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATH RS+RESVKGR+ GRTQEISRLIGRSLRACIDL ALGENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHDRSDRESVKGRVGGRTQEISRLIGRSLRACIDLNALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYL+AA +L DPRPLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLAAAEKLSDPRPLSCAIAAVSVGVVDGRVRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD+AL +CD+LFV QR+AL Sbjct: 181 SEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDLALASCDQLFVVQREALD 240 Query: 241 LPYQGMSPE-GPPPPKAFGS 259 PY G PE PP KAFGS Sbjct: 241 APYPGALPEPTSPPKKAFGS 260 >sp|A4T8F7|RNPH_MYCGI Tax_Id=350054 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium gilvum] Length = 260 Score = 429 bits (1104), Expect = e-118 Identities = 215/260 (82%), Positives = 233/260 (89%), Gaps = 1/260 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGRLDDELR V ITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKGSG+GW Sbjct: 1 MSRREDGRLDDELRPVTITRGFTTHPAGSVLVEFGETRVMCTASVTEGVPRWRKGSGQGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATH RS+RESVKGR+ GRTQEISRL+GRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHDRSDRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGA+VAL+DAVTYL AAG+L DPRPLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 121 LQADGGTRTAAITGAFVALSDAVTYLGAAGKLSDPRPLSCAIAAVSVGVVDGRVRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDK+LD A+ ACD+LF QR AL Sbjct: 181 TEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKMLDAAMAACDQLFEIQRAALE 240 Query: 241 LPYQGMSPE-GPPPPKAFGS 259 LPY G PE P KAFGS Sbjct: 241 LPYPGTLPESAEPAKKAFGS 260 >sp|B1MLZ3|RNPH_MYCA9 Tax_Id=561007 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Mycobacterium abscessus] Length = 258 Score = 426 bits (1096), Expect = e-117 Identities = 214/259 (82%), Positives = 234/259 (90%), Gaps = 1/259 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S R DGR DDELR V ITRGFT HPAGSVLIEFG T+VMCTAS TEGVPRWRKGSG GW Sbjct: 1 MSRREDGRQDDELRPVTITRGFTSHPAGSVLIEFGQTRVMCTASATEGVPRWRKGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP++THTRS+RESVKGR+ GRTQEISRLIGRSLRACIDL+ALGENTIA+DCDV Sbjct: 61 LTAEYAMLPASTHTRSDRESVKGRVGGRTQEISRLIGRSLRACIDLSALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVTYL+A G+L D PLSCAIAAVSVGVVDGR+RVDL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTYLAAHGKLADDEPLSCAIAAVSVGVVDGRVRVDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVE+QGTGEGATF RSTLDKLLD A+GA D+LFV Q++ALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEVQGTGEGATFARSTLDKLLDAAVGAADQLFVLQKEALA 240 Query: 241 LPYQGMSPEGPPPPKAFGS 259 LPY G+ P+ P KAFGS Sbjct: 241 LPYPGVLPDA-PQKKAFGS 258 >sp|Q5Z0V1|RNPH_NOCFA Tax_Id=37329 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Nocardia farcinica] Length = 257 Score = 419 bits (1076), Expect = e-115 Identities = 207/255 (81%), Positives = 228/255 (89%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S RADGR DDELR V ITRGFT HPAGSVL+EFG T+VMCTAS TEGVP WR+ SG GW Sbjct: 1 MSRRADGRADDELREVRITRGFTTHPAGSVLVEFGQTRVMCTASVTEGVPAWRRDSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATHTRS RESVKGR+ GRTQEISRL+GRSLRACIDLAA+GENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHTRSGRESVKGRVGGRTQEISRLVGRSLRACIDLAAIGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVT+L AAG L DP+P+SCAIAAVSVGVVDGR+R+DL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTWLGAAGALADPQPISCAIAAVSVGVVDGRVRLDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD AL C++LF Q++ALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDAALAGCEQLFAVQKEALA 240 Query: 241 LPYQGMSPEGPPPPK 255 LPY G+ PE P K Sbjct: 241 LPYPGVLPEPAEPAK 255 >sp|C1A1V2|RNPH_RHOE4 Tax_Id=234621 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Rhodococcus erythropolis] Length = 261 Score = 417 bits (1072), Expect = e-115 Identities = 210/261 (80%), Positives = 229/261 (87%), Gaps = 2/261 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 ++TR DGR DDELR V ITRGFT HPAGSVL+EFG+T+VMCTAS EGVPRWRKGSG GW Sbjct: 1 MTTREDGRADDELRTVKITRGFTSHPAGSVLVEFGNTRVMCTASVEEGVPRWRKGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATHTRS RESVKG++ GRTQEISRLIGRSLRACIDLAA+GENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHTRSGRESVKGKVGGRTQEISRLIGRSLRACIDLAAIGENTIALDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAAVTGAYVAL DAVTYL AA L DP+P+SC IAAVSVGVVDGR+R+DL Y Sbjct: 121 LQADGGTRTAAVTGAYVALVDAVTYLRAADLLSDPQPISCGIAAVSVGVVDGRVRLDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD AL C++LF QR ALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQRQALA 240 Query: 241 LPYQGMSPE--GPPPPKAFGS 259 PY G+ PE P P K FG+ Sbjct: 241 EPYPGVLPEPKNPEPKKKFGA 261 >tr|C3JU54|C3JU54_RHOER Tax_Id=596309 (rph)SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Rhodococcus erythropolis SK121] Length = 261 Score = 417 bits (1072), Expect = e-115 Identities = 210/261 (80%), Positives = 229/261 (87%), Gaps = 2/261 (0%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 ++TR DGR DDELR V ITRGFT HPAGSVL+EFG+T+VMCTAS EGVPRWRKGSG GW Sbjct: 1 MTTREDGRADDELRTVKITRGFTSHPAGSVLVEFGNTRVMCTASVEEGVPRWRKGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATHTRS RESVKG++ GRTQEISRLIGRSLRACIDLAA+GENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHTRSGRESVKGKVGGRTQEISRLIGRSLRACIDLAAIGENTIALDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAAVTGAYVAL DAVTYL AA L DP+P+SC IAAVSVGVVDGR+R+DL Y Sbjct: 121 LQADGGTRTAAVTGAYVALVDAVTYLRAADLLSDPQPISCGIAAVSVGVVDGRVRLDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD AL C++LF QR ALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQRQALA 240 Query: 241 LPYQGMSPE--GPPPPKAFGS 259 PY G+ PE P P K FG+ Sbjct: 241 EPYPGVLPEPKNPEPKKKFGA 261 >tr|Q0SGT5|Q0SGT5_RHOSR Tax_Id=101510 SubName: Full=tRNA nucleotidyltransferase; EC=2.7.7.56;[Rhodococcus sp.] Length = 262 Score = 412 bits (1058), Expect = e-113 Identities = 206/261 (78%), Positives = 228/261 (87%), Gaps = 3/261 (1%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 ++TR DGR DDELR V ITRGFT HPAGSVL+EFG+T+VMCTAS +GVPRWR+GSG GW Sbjct: 1 MTTREDGRADDELREVKITRGFTTHPAGSVLVEFGNTRVMCTASVEDGVPRWRQGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATHTRS RESVKG++ GRTQEISRL+GRSLRACIDLAA+GENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHTRSGRESVKGKVGGRTQEISRLVGRSLRACIDLAAIGENTIALDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVAL DAVTYL AAGRL DP+P+SC IAAVSVGVVDGR+R+DL Y Sbjct: 121 LQADGGTRTAAITGAYVALVDAVTYLRAAGRLADPQPISCGIAAVSVGVVDGRVRLDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD AL C++LF Q+ AL Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQKAALE 240 Query: 241 LPYQGMSPEGPPP---PKAFG 258 LPY G PE P K FG Sbjct: 241 LPYPGALPEPKVPETSKKKFG 261 >tr|C1AVV8|C1AVV8_RHOOB Tax_Id=632772 (rph)SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Rhodococcus opacus] Length = 262 Score = 412 bits (1058), Expect = e-113 Identities = 206/262 (78%), Positives = 229/262 (87%), Gaps = 3/262 (1%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 ++TR DGR DDELR V ITRGFT HPAGSVL+EFG+T+VMCTAS +GVPRWR+G+G GW Sbjct: 1 MTTREDGRADDELREVKITRGFTTHPAGSVLVEFGNTRVMCTASVEDGVPRWRQGTGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATHTRS RESVKG++ GRTQEISRL+GRSLRACIDLAA+GENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHTRSGRESVKGKVGGRTQEISRLVGRSLRACIDLAAIGENTIALDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVAL DAVTYL AAGRL DP+P+SC IAAVSVGVVDGR+R+DL Y Sbjct: 121 LQADGGTRTAAITGAYVALVDAVTYLRAAGRLADPQPISCGIAAVSVGVVDGRVRLDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVEIQGTGEGATFPRSTLDKLLD AL C++LF Q+ AL Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQKAALE 240 Query: 241 LPYQGMSPEGPPP---PKAFGS 259 LPY G PE P K FGS Sbjct: 241 LPYPGELPEPKVPETSKKKFGS 262 >tr|C2AS65|C2AS65_TSUPA Tax_Id=521096 SubName: Full=RNAse PH; EC=2.7.7.56;[Tsukamurella paurometabola DSM 20162] Length = 260 Score = 398 bits (1022), Expect = e-109 Identities = 196/255 (76%), Positives = 221/255 (86%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 +S RADGR DDELR V ITRGFT++PAGSVL+EFG+TKV+CTAS GVP WR+GSG+GW Sbjct: 1 MSRRADGRADDELRPVTITRGFTQNPAGSVLVEFGNTKVLCTASVELGVPGWRRGSGQGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP ATH RS RES KG++ GRT EISRLIGRSLRACIDLAALGENTIA+DCDV Sbjct: 61 LTAEYAMLPGATHERSRRESTKGKVGGRTHEISRLIGRSLRACIDLAALGENTIAIDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTA++TGAYVAL DAVTYL AAG+L DP+P+SCAIAAVSVGVVDGR+R+DL Y Sbjct: 121 LQADGGTRTASITGAYVALCDAVTYLGAAGKLTDPQPISCAIAAVSVGVVDGRVRLDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATDTGTLVE+QGTGEGATF R+TLD +LD AL +KLF Q+ ALA Sbjct: 181 EEDSRAEVDMNVVATDTGTLVEVQGTGEGATFARTTLDWMLDSALSGTEKLFAVQKQALA 240 Query: 241 LPYQGMSPEGPPPPK 255 PY G+ PE PK Sbjct: 241 APYPGVLPETEGEPK 255 >tr|D0L9N7|D0L9N7_9ACTO Tax_Id=526226 SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Gordonia bronchialis DSM 43247] Length = 251 Score = 394 bits (1013), Expect = e-108 Identities = 195/248 (78%), Positives = 217/248 (87%) Query: 1 VSTRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGW 60 ++TRADGR DDELR + TRGFT HPAGSVL+EFG T+VMCTAS +GVP WR+GSG GW Sbjct: 1 MTTRADGRADDELRPISFTRGFTSHPAGSVLVEFGQTRVMCTASVNDGVPPWRRGSGLGW 60 Query: 61 LTAEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDV 120 LTAEYAMLP+ATH RS RESVKGR+ GRT EISRL+GRSLRACIDL ALGENTIA+DCDV Sbjct: 61 LTAEYAMLPAATHERSSRESVKGRVGGRTHEISRLVGRSLRACIDLGALGENTIALDCDV 120 Query: 121 LQADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSY 180 LQADGGTRTAA+TGAYVALADAVT+L AAG+L DP+PLSCAIAAVSVGVVDGR+R+DL Y Sbjct: 121 LQADGGTRTAAITGAYVALADAVTWLRAAGKLSDPQPLSCAIAAVSVGVVDGRVRLDLPY 180 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EEDSRAEVDMNV+ATD GTLVE+QGTGEGATF RSTLD LLD+A +KLF AQR+ LA Sbjct: 181 EEDSRAEVDMNVVATDAGTLVEVQGTGEGATFARSTLDALLDVAAVGTEKLFEAQREVLA 240 Query: 241 LPYQGMSP 248 PY G P Sbjct: 241 APYPGELP 248 >tr|C6WNQ7|C6WNQ7_ACTMD Tax_Id=446462 SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Actinosynnema mirum] Length = 254 Score = 387 bits (994), Expect = e-106 Identities = 191/246 (77%), Positives = 216/246 (87%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGR DD LR + ITRGF + PAGSVLIEFG+T+V+C AS TEGVPRWR GSG GW+TA Sbjct: 3 RTDGRNDDVLRDIRITRGFQQWPAGSVLIEFGNTRVLCAASVTEGVPRWRSGSGLGWVTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLPSATHTR +RES+KGR+ GRT EISRLIGRSLRACIDLAALGENTI +DCDV+QA Sbjct: 63 EYAMLPSATHTRGDRESIKGRVGGRTHEISRLIGRSLRACIDLAALGENTIVIDCDVIQA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTAA+TGAYVALADAVT+L AAGRL DP+PLSCAI+AVSVGVVDGR+R+DL YEED Sbjct: 123 DGGTRTAAITGAYVALADAVTWLGAAGRLADPQPLSCAISAVSVGVVDGRVRLDLPYEED 182 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALPY 243 SRAEVDMNV+ATD GTLVE+QGTGEGATF RSTLD++LD+AL C +L Q +ALA PY Sbjct: 183 SRAEVDMNVVATDAGTLVEVQGTGEGATFARSTLDRMLDLALQGCAELNRLQTEALAQPY 242 Query: 244 QGMSPE 249 G+ PE Sbjct: 243 PGVLPE 248 >sp|A4F913|RNPH_SACEN Tax_Id=405948 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Saccharopolyspora erythraea] Length = 251 Score = 384 bits (985), Expect = e-105 Identities = 189/247 (76%), Positives = 215/247 (87%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 RADGR DD LR V ITRG+ + PAGSVL+EFG T+V+C AS EGVPRWR GSG GW+TA Sbjct: 3 RADGRSDDALREVRITRGYQDWPAGSVLVEFGRTRVLCAASVQEGVPRWRAGSGLGWVTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLPS+T+TRS RESVKGR+ GRT EISRL+GRSLRACIDLAALGENTIA+DCDV+QA Sbjct: 63 EYAMLPSSTNTRSARESVKGRIGGRTHEISRLVGRSLRACIDLAALGENTIALDCDVIQA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTAA+TGAYVALADA+T+LSAAGRL DP+PLSC+IAAVSVGVVDGR+R+DL YEED Sbjct: 123 DGGTRTAAITGAYVALADAITWLSAAGRLTDPKPLSCSIAAVSVGVVDGRVRLDLPYEED 182 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALPY 243 SRAEVDMNV+ATD GTLVE+QGTGEGATF RST+DK++D AL C +L Q +ALA PY Sbjct: 183 SRAEVDMNVVATDHGTLVEVQGTGEGATFTRSTMDKMIDFALAGCSELSRIQSEALAAPY 242 Query: 244 QGMSPEG 250 G P G Sbjct: 243 PGELPGG 249 >tr|C7MWC0|C7MWC0_SACVD Tax_Id=471857 SubName: Full=RNAse PH; EC=2.7.7.56;[Saccharomonospora viridis] Length = 258 Score = 384 bits (985), Expect = e-105 Identities = 190/256 (74%), Positives = 217/256 (84%), Gaps = 1/256 (0%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGR DD+LR V ITRGF + PAGSVLIE G+T+V+C AS EGVPRWR GSG GW+TA Sbjct: 3 RVDGRDDDQLREVRITRGFQQWPAGSVLIEVGNTRVLCAASVVEGVPRWRNGSGLGWVTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EY+MLPSATHTR +RESVKGR+ GRT EISRLIGRSLR+CIDLAALGENTI +DCDV+QA Sbjct: 63 EYSMLPSATHTRGDRESVKGRIGGRTHEISRLIGRSLRSCIDLAALGENTIVIDCDVIQA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTAA+TG YVALADA+T+L AAGRL DP+PLS A++AVSVGVVDGR+R+DL YEED Sbjct: 123 DGGTRTAAITGGYVALADAITWLGAAGRLADPKPLSAAVSAVSVGVVDGRVRLDLPYEED 182 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALPY 243 SRAEVDMNV+ATD GTL+E+QGTGEGATF RSTLDK+LD+A C +L Q +ALA PY Sbjct: 183 SRAEVDMNVVATDAGTLIEVQGTGEGATFTRSTLDKMLDLAQAGCAELARIQAEALAAPY 242 Query: 244 QGMSPEGPPPPKAFGS 259 G PE PP PK GS Sbjct: 243 PGELPE-PPQPKKKGS 257 >tr|C8XFY0|C8XFY0_NAKMY Tax_Id=479431 SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Nakamurella multipartita] Length = 246 Score = 364 bits (935), Expect = 5e-99 Identities = 184/239 (76%), Positives = 201/239 (84%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 RADGR D ELR V TRGF +HPAGSVL+EFG TKV+C AS T GVPRWRKGSG GWLTA Sbjct: 3 RADGRADHELRPVTFTRGFQQHPAGSVLVEFGGTKVLCAASVTTGVPRWRKGSGLGWLTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLPSATH RS+RESVKGR+ GRT EISRLIGRSLRAC+DL +LGENTIAVDCDVLQA Sbjct: 63 EYAMLPSATHERSDRESVKGRVGGRTHEISRLIGRSLRACLDLRSLGENTIAVDCDVLQA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTAA+TGAYVALADAV YL G+L DP+PLSC IAAVSVGVV GR+R+DL YEED Sbjct: 123 DGGTRTAAITGAYVALADAVAYLRERGQLADPQPLSCQIAAVSVGVVGGRVRLDLPYEED 182 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALP 242 +RAEVDMNV+ATD GTLVE+QGT EGAT+ RSTLD +LD AL L QR ALA P Sbjct: 183 ARAEVDMNVVATDVGTLVEVQGTAEGATYSRSTLDAMLDSALAGIATLTEMQRAALAGP 241 >tr|C0U6J3|C0U6J3_9ACTO Tax_Id=526225 SubName: Full=RNAse PH; EC=2.7.7.56;[Geodermatophilus obscurus DSM 43160] Length = 250 Score = 319 bits (817), Expect = 2e-85 Identities = 159/236 (67%), Positives = 187/236 (79%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGR D+LR V ITRG+ +H GSVL+EFG T+V+C AS TEGVPRWRKGSG GW+TA Sbjct: 9 RPDGRAADQLRPVTITRGWLDHAEGSVLVEFGRTRVLCAASVTEGVPRWRKGSGLGWVTA 68 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLP ATHTR +RESVKGR+ GRT EISRLIGRSLRA IDL ALGEN++A+DCDVLQA Sbjct: 69 EYAMLPRATHTRGDRESVKGRIGGRTHEISRLIGRSLRAAIDLGALGENSVAIDCDVLQA 128 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTAA+TGAYVALADAV +L +L PR + ++AAVSVGVVDG+ R+DL+YEED Sbjct: 129 DGGTRTAAITGAYVALADAVGWLGERRKLARPRAVLQSVAAVSVGVVDGQPRLDLAYEED 188 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 RA DMNV+ T G+ VE+QGT E F R+ LD LLD+A+G C +L Q DAL Sbjct: 189 VRAGTDMNVVCTGDGSFVEVQGTAENGVFDRAALDALLDLAVGGCAELSRIQADAL 244 >sp|A8M4I1|RNPH_SALAI Tax_Id=391037 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Salinispora arenicola] Length = 241 Score = 313 bits (802), Expect = 1e-83 Identities = 163/240 (67%), Positives = 191/240 (79%), Gaps = 4/240 (1%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGRL D LR V +TRG++ HP GSVL+EFG T+V+CTAS TEGVPRWRKGSG GW+TA Sbjct: 3 RPDGRLPDHLRPVTLTRGWSTHPEGSVLVEFGATRVLCTASVTEGVPRWRKGSGLGWVTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLP AT+TRS+RESVKGR+ GRT EISRLIGRSLRA IDL ALGEN++ +DCDVLQA Sbjct: 63 EYAMLPRATNTRSDRESVKGRVGGRTHEISRLIGRSLRASIDLKALGENSVVLDCDVLQA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRP---LSCAIAAVSVGVVDGRIRVDLSY 180 DGGTRTAA+TGAYVAL DAVT+L AA R L RP + ++AAVSVGVV G R+DL+Y Sbjct: 123 DGGTRTAAITGAYVALYDAVTWL-AARRSLAGRPENVMHRSVAAVSVGVVAGEPRLDLNY 181 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 +ED+ AEVD+NV+ T TG VE+QGTGE F R LD LLD+A+ C L AQR AL+ Sbjct: 182 DEDATAEVDLNVVCTGTGDFVEVQGTGEAGVFSRGQLDALLDLAVAGCLDLAEAQRKALS 241 >sp|A4X3X5|RNPH_SALTO Tax_Id=369723 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Salinispora tropica] Length = 241 Score = 311 bits (798), Expect = 3e-83 Identities = 163/240 (67%), Positives = 190/240 (79%), Gaps = 4/240 (1%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGRL D LR V +TRG++ HP GSVL+EFG T+V+CTAS TEGVPRWRKGSG GW+TA Sbjct: 3 RPDGRLPDHLRPVTLTRGWSTHPEGSVLVEFGATRVLCTASVTEGVPRWRKGSGLGWVTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLP AT+TRS+RESVKGR+ GRT EISRLIGRSLRA IDL ALGEN+I +DCDVLQA Sbjct: 63 EYAMLPRATNTRSDRESVKGRVGGRTHEISRLIGRSLRASIDLKALGENSIVLDCDVLQA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRP---LSCAIAAVSVGVVDGRIRVDLSY 180 DGGTRTAA+TGAYVAL DAVT+L AA R L RP + ++AAVSVGVV G R+DL+Y Sbjct: 123 DGGTRTAAITGAYVALHDAVTWL-AARRSLAGRPETVMHRSVAAVSVGVVAGEPRLDLNY 181 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 ED+ AEVD+NV+ T G VE+QGTGE F R LD LLD+A+ C +L AQR AL+ Sbjct: 182 AEDASAEVDLNVVCTGAGDFVEVQGTGEAGVFSRGQLDALLDLAVAGCVELAEAQRKALS 241 >tr|C4RAZ9|C4RAZ9_9ACTO Tax_Id=219305 SubName: Full=Ribonuclease PH;[Micromonospora sp. ATCC 39149] Length = 241 Score = 310 bits (794), Expect = 1e-82 Identities = 160/240 (66%), Positives = 191/240 (79%), Gaps = 4/240 (1%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGRL D+LR V ++RG++ HP GSVL+EFG T+V+CTAS TEGVPRWRKGSG GW+TA Sbjct: 3 RPDGRLPDQLRPVTLSRGWSTHPEGSVLVEFGGTRVLCTASVTEGVPRWRKGSGLGWVTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLP AT+TRS+RESVKGR+ GRT EISRLIGRSLRA IDL ALGEN++ +DCDVLQA Sbjct: 63 EYAMLPRATNTRSDRESVKGRVGGRTHEISRLIGRSLRASIDLKALGENSVVLDCDVLQA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRP---LSCAIAAVSVGVVDGRIRVDLSY 180 DGGTRTAAVTGAYVAL DAV++L AA + L +P + ++AAVSVGV+ G R+DL Y Sbjct: 123 DGGTRTAAVTGAYVALHDAVSWL-AARKALAGKPEKVMHRSVAAVSVGVIAGEARLDLCY 181 Query: 181 EEDSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 EED AEVDMNV+ T +G VE+QGTGE F R LD LLD+A+ C +L AQR AL+ Sbjct: 182 EEDVAAEVDMNVVCTGSGEFVEVQGTGESGVFARDQLDALLDLAVAGCAELAEAQRKALS 241 >tr|C8NSW3|C8NSW3_9CORY Tax_Id=585529 (rph)SubName: Full=tRNA nucleotidyltransferase; EC=2.7.7.56;[Corynebacterium genitalium ATCC 33030] Length = 243 Score = 310 bits (793), Expect = 1e-82 Identities = 157/236 (66%), Positives = 188/236 (79%), Gaps = 1/236 (0%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 RADGR DE+R V ITRGFT +PAGSVL+EFG+T+VMCTAS EGVPR++K SG+GWLTA Sbjct: 7 RADGRALDEMRPVRITRGFTSNPAGSVLVEFGNTRVMCTASAEEGVPRFKKDSGEGWLTA 66 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLP+ATH R RES+KG++ GRT EISRL+GRSLRA +DL ALGENTI +DCDVLQA Sbjct: 67 EYAMLPAATHDRMPRESMKGKVKGRTHEISRLVGRSLRAAVDLTALGENTIQLDCDVLQA 126 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTA++TGAYVALADA+ YL G ++ PL +AAVSVG+VDGR+ +DL YEED Sbjct: 127 DGGTRTASITGAYVALADAIGYLKEQG-VVPGEPLLAPVAAVSVGIVDGRVCLDLPYEED 185 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 SRAEVD+NV+ TD+G VE+QGTGE F R L +LD A C +L AQ+ AL Sbjct: 186 SRAEVDLNVVMTDSGDFVEVQGTGEHGLFGREQLGLMLDAAEKGCRELIDAQKAAL 241 >tr|Q4JX02|Q4JX02_CORJK Tax_Id=306537 (rphA)SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Corynebacterium jeikeium] Length = 256 Score = 308 bits (790), Expect = 3e-82 Identities = 159/238 (66%), Positives = 189/238 (79%), Gaps = 1/238 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TRADGR DELR V ITRGFT +PAGSVL+EFG+T+VMCTAS EGVPR++K SG+GWLT Sbjct: 17 TRADGRATDELRPVRITRGFTSNPAGSVLVEFGNTRVMCTASVEEGVPRFKKDSGEGWLT 76 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLP++TH R RES+KG++ GRTQEISRL+GR+LRA +DL LGENT+ +DCDVLQ Sbjct: 77 AEYAMLPASTHERMPRESMKGKVKGRTQEISRLVGRALRAAVDLKELGENTVNIDCDVLQ 136 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTAA+TGAYVALADA+ L A G ++ +PL +AAVSVG++DG +DL YEE Sbjct: 137 ADGGTRTAAITGAYVALADALAVLQARG-VVPGQPLRAPVAAVSVGIIDGVPCLDLPYEE 195 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 DSRA+VDMNV T G VEIQGTGE A F R L+ LLD+A G +L AQR ALA Sbjct: 196 DSRADVDMNVAMTAEGRFVEIQGTGENAEFTREELNTLLDLAEGGLRELIEAQRAALA 253 >sp|C4LJY5|RNPH_CORK4 Tax_Id=645127 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Corynebacterium kroppenstedtii] Length = 254 Score = 308 bits (788), Expect = 5e-82 Identities = 158/245 (64%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 RADGR DE+R V I RGFT +PAGSVL+EFG+T+VMCTAS + VPR++K SG+GWLTA Sbjct: 6 RADGRALDEMRPVRIVRGFTTNPAGSVLVEFGNTRVMCTASVEDRVPRFKKDSGEGWLTA 65 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EY+MLPSAT R RES++G++ GRT EISRL+GRSLRA IDL ALGENTIA+DCDVLQA Sbjct: 66 EYSMLPSATAERMPRESMRGKVKGRTHEISRLVGRSLRAAIDLKALGENTIALDCDVLQA 125 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTA++TGAYVALADA+TYL A G L+ L +AAVSVG++DG + +DL YEED Sbjct: 126 DGGTRTASITGAYVALADALTYLEAEG-LVSQNALLPPVAAVSVGLIDGHVCLDLPYEED 184 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALPY 243 SRAEVDMNV+ T++G VEIQGTGE +TF R L + +D A C +L AQ++AL+ PY Sbjct: 185 SRAEVDMNVVMTESGEFVEIQGTGEHSTFSREQLMQFMDAAEKGCSELIRAQKEALSKPY 244 Query: 244 QGMSP 248 P Sbjct: 245 PKRLP 249 >tr|C8RVS0|C8RVS0_CORJE Tax_Id=525262 (rph)SubName: Full=tRNA nucleotidyltransferase; EC=2.7.7.56;[Corynebacterium jeikeium ATCC 43734] Length = 256 Score = 306 bits (785), Expect = 1e-81 Identities = 158/238 (66%), Positives = 189/238 (79%), Gaps = 1/238 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TRADGR +ELR V ITRGFT +PAGSVL+EFG+T+VMCTAS EGVPR++K SG+GWLT Sbjct: 17 TRADGRATNELRPVRITRGFTSNPAGSVLVEFGNTRVMCTASVEEGVPRFKKDSGEGWLT 76 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLP++TH R RES+KG++ GRTQEISRL+GR+LRA +DL LGENT+ +DCDVLQ Sbjct: 77 AEYAMLPASTHERMPRESMKGKVKGRTQEISRLVGRALRAAVDLKELGENTVNIDCDVLQ 136 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTAA+TGAYVALADA+ L A G ++ +PL +AAVSVG++DG +DL YEE Sbjct: 137 ADGGTRTAAITGAYVALADALAVLQARG-VVPGQPLRAPVAAVSVGIIDGVPCLDLPYEE 195 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 DSRA+VDMNV T G VEIQGTGE A F R L+ LLD+A G +L AQR ALA Sbjct: 196 DSRADVDMNVAMTAEGRFVEIQGTGENAEFTREELNTLLDLAEGGLRELIEAQRAALA 253 >sp|A1SGA2|RNPH_NOCSJ Tax_Id=196162 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Nocardioides sp.] Length = 242 Score = 306 bits (783), Expect = 2e-81 Identities = 156/237 (65%), Positives = 186/237 (78%), Gaps = 1/237 (0%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGR DDELR + ITR + +H AGSVL+EFG T+V+C AS EGVPRWRKGSG GW+TA Sbjct: 6 REDGRADDELRPITITRHWLDHAAGSVLVEFGRTRVLCAASAAEGVPRWRKGSGLGWVTA 65 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLP++T+TRS+RESVKGR+ GRT EISRLIGRSLRA ID ALGENTI +DCDVLQA Sbjct: 66 EYAMLPASTNTRSDRESVKGRIGGRTHEISRLIGRSLRAIIDYKALGENTIQLDCDVLQA 125 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTAA+TGAYVALADAV +L + G L PL+ ++AAVSVG++DG R+DL Y ED Sbjct: 126 DGGTRTAAITGAYVALADAVEHLRSTGALTG-EPLTGSVAAVSVGIIDGVPRLDLPYVED 184 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 RAE DMNV+ T +G VE+QGT EGA F R+ LD LL +A C L Q++AL+ Sbjct: 185 VRAETDMNVVMTGSGKFVEVQGTAEGAAFDRAELDALLALAEKGCADLTRLQQEALS 241 >tr|C0XRA4|C0XRA4_9CORY Tax_Id=525263 (rph)SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Corynebacterium lipophiloflavum DSM 44291] Length = 246 Score = 305 bits (782), Expect = 2e-81 Identities = 156/237 (65%), Positives = 186/237 (78%), Gaps = 1/237 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TR DGR DE+R V ITRGFT +PAGSVL+EFG T+VMCTAS GVPR++K SG+GWLT Sbjct: 9 TRLDGRAFDEMRPVRITRGFTTNPAGSVLVEFGATRVMCTASVEVGVPRFKKDSGEGWLT 68 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLPSATH R RES+KG++ GRT EISRL+GRSLRA +DLA LGENTI +DCDVLQ Sbjct: 69 AEYAMLPSATHERMPRESMKGKVKGRTHEISRLVGRSLRAAVDLAQLGENTIQLDCDVLQ 128 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTA++TGAYVALADA+ +LS G L+ PL +AAVS G+VDG + +DL YEE Sbjct: 129 ADGGTRTASITGAYVALADAIAFLSERG-LVPGEPLLAPVAAVSAGLVDGHVALDLPYEE 187 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 DSRAEVD+NV+ D+G VEIQGTGE F R+ LD +L +A C +L AQ+ AL Sbjct: 188 DSRAEVDLNVVMNDSGNFVEIQGTGEHGLFGRAELDAMLTVAEKGCRELIEAQKAAL 244 >tr|C6R803|C6R803_9CORY Tax_Id=553206 (rph)SubName: Full=tRNA nucleotidyltransferase; EC=2.7.7.56;[Corynebacterium tuberculostearicum SK141] Length = 242 Score = 303 bits (775), Expect = 2e-80 Identities = 153/237 (64%), Positives = 190/237 (80%), Gaps = 1/237 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TRADGR D++R+V ITR FT +PAGSVL+EFG+T+VMCTAS GVPR+++ SG+GWLT Sbjct: 5 TRADGRALDQMRSVRITRNFTTNPAGSVLVEFGNTRVMCTASVEYGVPRFKRDSGEGWLT 64 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLPSATH R RES+KG++ GRT EISRL+GRSLRA +DL LGENTI +DCDVLQ Sbjct: 65 AEYAMLPSATHDRMPRESMKGKVKGRTHEISRLVGRSLRAAVDLEELGENTIQLDCDVLQ 124 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTA++TGAYVALADA+ +L A G ++ PL +IAAVSVG++DG I +DL YEE Sbjct: 125 ADGGTRTASITGAYVALADAIAHLKAEG-VVPGEPLLDSIAAVSVGIIDGEICLDLPYEE 183 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 DSRAEVD+NV+ ++G VEIQGTGE F R L+++LD+A C +L AQ+ AL Sbjct: 184 DSRAEVDLNVVMQESGDFVEIQGTGEHGLFGREDLNEMLDVAQKGCRELIAAQKAAL 240 >tr|A6WEI7|A6WEI7_KINRD Tax_Id=266940 SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Kineococcus radiotolerans] Length = 248 Score = 302 bits (774), Expect = 2e-80 Identities = 154/238 (64%), Positives = 184/238 (77%), Gaps = 1/238 (0%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 RADGR DELR V ITR + +H GSVL+EFG T+V+C AS TEGVPRWRKGSG+GW+TA Sbjct: 10 RADGRAVDELRPVTITRNWLDHAEGSVLVEFGRTRVLCAASFTEGVPRWRKGSGQGWVTA 69 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EYAMLP AT+TR +RESVKG++ GRT EISRLIGRSLRA +D LGENTI +DCDVLQA Sbjct: 70 EYAMLPRATNTRGDRESVKGKIGGRTHEISRLIGRSLRAVVDTKQLGENTIVLDCDVLQA 129 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPR-PLSCAIAAVSVGVVDGRIRVDLSYEE 182 DGGTRTAAVTGAYVALADA+++ G + R PL+ +++A+SVGVVDG +DL Y E Sbjct: 130 DGGTRTAAVTGAYVALADAISWARGQGIVKASRQPLTGSVSAISVGVVDGVPVLDLPYVE 189 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALA 240 D RAE DMNV+ T G VE+QGT EG F R+ LD LLD+A+G C +L Q +ALA Sbjct: 190 DVRAETDMNVVVTGDGRFVEVQGTAEGTPFDRAELDALLDLAVGGCARLAALQAEALA 247 >tr|C5VAM8|C5VAM8_9CORY Tax_Id=553207 (rph)SubName: Full=tRNA nucleotidyltransferase; EC=2.7.7.56;[Corynebacterium matruchotii ATCC 14266] Length = 242 Score = 302 bits (774), Expect = 2e-80 Identities = 153/237 (64%), Positives = 187/237 (78%), Gaps = 1/237 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TRADGR D+LR + ITRGFT +PAGSVLIE+G+T+VMCTAS +GVPR++K SG+GWLT Sbjct: 5 TRADGRAPDQLRPIRITRGFTTNPAGSVLIEYGNTRVMCTASAEQGVPRFKKDSGEGWLT 64 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLP+ATH R RES++G++ GRT EISRL+GRSLRA IDL LGENTI +DCDVLQ Sbjct: 65 AEYAMLPAATHERMPRESMRGKVKGRTHEISRLVGRSLRAAIDLTLLGENTINIDCDVLQ 124 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTA++TGAY+ALADA+ YL+A G ++ PL IAAVSVG++DG + +DL YEE Sbjct: 125 ADGGTRTASITGAYIALADAIAYLTAQG-VVPGNPLLPPIAAVSVGIIDGHVCLDLPYEE 183 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 DSRA+VD+NVI T G VEIQGT E TF R L+ +LD A C +L AQ +L Sbjct: 184 DSRADVDLNVIMTQEGKFVEIQGTAEHNTFSRDELNAMLDYAEKGCKELIEAQLASL 240 >tr|C3PIN6|C3PIN6_CORA7 Tax_Id=548476 (rphA)SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Corynebacterium aurimucosum] Length = 242 Score = 302 bits (773), Expect = 3e-80 Identities = 154/237 (64%), Positives = 188/237 (79%), Gaps = 1/237 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TRADGR D+LR+V ITR FT +PAGSVL+EFG+T+VMCTAS GVPR++K SG+GWLT Sbjct: 5 TRADGRALDQLRSVRITRNFTTNPAGSVLVEFGNTRVMCTASVEFGVPRFKKDSGEGWLT 64 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLPSATH R RES+KG++ GRT EISRL+GRSLRA +DL+ LGENTI +DCDVLQ Sbjct: 65 AEYAMLPSATHERMPRESMKGKVKGRTHEISRLVGRSLRAAVDLSELGENTIQLDCDVLQ 124 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTA++TGAYVALADA+ YL G ++ PL IAAVSVG++DG + +DL YEE Sbjct: 125 ADGGTRTASITGAYVALADAIAYLKEEG-VVPGEPLLDPIAAVSVGIIDGHVCLDLPYEE 183 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 DSRAEVD+NV+ + G VEIQGTGE F R+ L+ +LD+A C +L AQ+ AL Sbjct: 184 DSRAEVDLNVVMQEGGDFVEIQGTGEHGLFGRAELNDMLDVAQAGCAQLIDAQKAAL 240 >tr|C2BMM9|C2BMM9_9CORY Tax_Id=525264 (rph)SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Corynebacterium pseudogenitalium ATCC 33035] Length = 242 Score = 302 bits (773), Expect = 3e-80 Identities = 153/237 (64%), Positives = 189/237 (79%), Gaps = 1/237 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TRADGR D++R+V ITR FT +PAGSVL+EFG+T+VMCTAS GVPR+++ SG+GWLT Sbjct: 5 TRADGRALDQMRSVRITRNFTTNPAGSVLVEFGNTRVMCTASVEYGVPRFKRDSGEGWLT 64 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLPSATH R RES+KG++ GRT EISRL+GRSLRA +DL LGENTI +DCDVLQ Sbjct: 65 AEYAMLPSATHDRMPRESMKGKVKGRTHEISRLVGRSLRAAVDLEELGENTIQLDCDVLQ 124 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTA++TGAYVALADA+ +L A G ++ PL IAAVSVG++DG I +DL YEE Sbjct: 125 ADGGTRTASITGAYVALADAIAHLKAEG-VVPGEPLLDPIAAVSVGIIDGEICLDLPYEE 183 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 DSRAEVD+NV+ ++G VEIQGTGE F R L+++LD+A C +L AQ+ AL Sbjct: 184 DSRAEVDLNVVMQESGDFVEIQGTGEHGLFGREELNEMLDVAQKGCRELIAAQKAAL 240 >sp|A8L766|RNPH_FRASN Tax_Id=298653 (rph)RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase;[Frankia sp.] Length = 260 Score = 301 bits (770), Expect = 6e-80 Identities = 159/256 (62%), Positives = 186/256 (72%), Gaps = 10/256 (3%) Query: 4 RADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTA 63 R DGR D+LR V I RG+ EH GS LI G T+V+C AS TEGVPRWRKGSG GW+TA Sbjct: 3 RVDGRTTDQLRDVTIERGWQEHAEGSALISAGRTRVLCAASVTEGVPRWRKGSGLGWVTA 62 Query: 64 EYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQA 123 EY+MLP ATHTR++RESV+GR+ GRT EISRLIGRSLRA IDL ALGENTIA+DCDVL A Sbjct: 63 EYSMLPRATHTRNDRESVRGRIGGRTHEISRLIGRSLRAAIDLKALGENTIAIDCDVLLA 122 Query: 124 DGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEED 183 DGGTRTAA+TGAYVALADA +L GR P + ++ AVSVGVV G +DL+Y ED Sbjct: 123 DGGTRTAAITGAYVALADACRWL---GR---PAAIVTSVCAVSVGVVGGVPMLDLAYTED 176 Query: 184 SRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALPY 243 S A+ DMNV+ T G VE+QGT EG F RSTLD+LLD+A+ C +L Q ALA P Sbjct: 177 STADTDMNVVRTGAGGFVEVQGTAEGTPFERSTLDELLDLAVAGCTRLTEIQNAALAAP- 235 Query: 244 QGMSPEGPPPPKAFGS 259 GPP P+ G+ Sbjct: 236 ---PAAGPPAPERAGA 248 >tr|C0E3N5|C0E3N5_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 242 Score = 300 bits (769), Expect = 8e-80 Identities = 152/237 (64%), Positives = 187/237 (78%), Gaps = 1/237 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 TRADGR D+LR + ITRGFT +PAGSVLIE+G+T+VMCTAS +GVPR++K SG+GWLT Sbjct: 5 TRADGRAPDQLRPIRITRGFTTNPAGSVLIEYGNTRVMCTASAEQGVPRFKKDSGEGWLT 64 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEYAMLP+ATH R RES++G++ GRT EISRL+GRSLRA IDL LGENTI +DCDVLQ Sbjct: 65 AEYAMLPAATHERMPRESMRGKVKGRTHEISRLVGRSLRAAIDLTLLGENTINIDCDVLQ 124 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTA++TGAY+ALADA+ +L+A G ++ PL IAAVSVG++DG + +DL YEE Sbjct: 125 ADGGTRTASITGAYIALADAIAHLTAQG-VVPGNPLLPPIAAVSVGIIDGHVCLDLPYEE 183 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 DSRA+VD+NVI T G VEIQGT E TF R L+ +LD A C +L AQ +L Sbjct: 184 DSRADVDLNVIMTQEGKFVEIQGTAEHNTFSREELNAMLDYAEKGCKELIEAQLASL 240 >tr|C2CLJ1|C2CLJ1_CORST Tax_Id=525268 (rph)SubName: Full=Ribonuclease PH; EC=2.7.7.56;[Corynebacterium striatum ATCC 6940] Length = 245 Score = 299 bits (766), Expect = 2e-79 Identities = 150/237 (63%), Positives = 190/237 (80%), Gaps = 1/237 (0%) Query: 3 TRADGRLDDELRAVVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLT 62 +RADGR D++R+V ITR FT +PAGSVL+EFG+T+VMCTAS GVPR++K SG+GWLT Sbjct: 8 SRADGRALDQMRSVRITRNFTTNPAGSVLVEFGNTRVMCTASVEFGVPRFKKDSGEGWLT 67 Query: 63 AEYAMLPSATHTRSERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQ 122 AEY+MLP+ATH R RES+KG++ GRT EISRL+GRSLRA +DL+ LGENTI +DCDVLQ Sbjct: 68 AEYSMLPAATHDRMPRESMKGKVKGRTHEISRLVGRSLRAAVDLSELGENTIQLDCDVLQ 127 Query: 123 ADGGTRTAAVTGAYVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEE 182 ADGGTRTA++TGAYVALADA+ YL + G ++ PL +AAVSVG++DG+I +DL YEE Sbjct: 128 ADGGTRTASITGAYVALADAIEYLKSEG-VVPGEPLLDPVAAVSVGIIDGQICLDLPYEE 186 Query: 183 DSRAEVDMNVIATDTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDAL 239 DSRAEVD+NV+ + G VEIQGTGE F R L+ +LD+A C++L AQ+ AL Sbjct: 187 DSRAEVDLNVVMQEGGDFVEIQGTGEHGLFGRDELNSMLDVAQKGCEELIEAQKAAL 243 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.317 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 1,957,407,223 Number of extensions: 80486286 Number of successful extensions: 230059 Number of sequences better than 10.0: 2666 Number of HSP's gapped: 230580 Number of HSP's successfully gapped: 2782 Length of query: 259 Length of database: 3,808,957,724 Length adjustment: 134 Effective length of query: 125 Effective length of database: 2,314,413,648 Effective search space: 289301706000 Effective search space used: 289301706000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 79 (35.0 bits)