BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML1200 (308 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|Q9X7E8|Q9X7E8_MYCLE Tax_Id=1769 (rluC)RecName: Full=Pseudouri... 567 e-160 tr|B8ZR77|B8ZR77_MYCLB Tax_Id=561304 RecName: Full=Pseudouridine... 567 e-160 tr|Q740U1|Q740U1_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine s... 513 e-144 sp|P0A5T3|Y1567_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 503 e-141 sp|P0A5T2|Y1540_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 503 e-141 tr|C6DSQ2|C6DSQ2_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine... 503 e-141 tr|C1ANH6|C1ANH6_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine... 503 e-141 tr|A5U2P7|A5U2P7_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine... 503 e-141 tr|A1KIX0|A1KIX0_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine... 503 e-141 tr|A5WMM7|A5WMM7_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine... 503 e-141 tr|A4KH86|A4KH86_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine... 503 e-141 tr|A2VI57|A2VI57_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine... 503 e-141 tr|A0PNY1|A0PNY1_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine... 497 e-139 tr|B2HQ68|B2HQ68_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine... 494 e-138 tr|A0QHM4|A0QHM4_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine... 489 e-136 tr|A1T8T1|A1T8T1_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine... 481 e-134 tr|Q1B7D5|Q1B7D5_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine... 480 e-133 tr|A1UHN8|A1UHN8_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine... 480 e-133 tr|A3Q164|A3Q164_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine... 477 e-133 tr|A4T9K4|A4T9K4_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine... 476 e-132 tr|A0QX52|A0QX52_MYCS2 Tax_Id=246196 RecName: Full=Pseudouridine... 471 e-131 tr|B1MC08|B1MC08_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine... 444 e-123 tr|C3JJ29|C3JJ29_RHOER Tax_Id=596309 RecName: Full=Pseudouridine... 431 e-119 tr|C1AU39|C1AU39_RHOOB Tax_Id=632772 (rluD)RecName: Full=Pseudou... 430 e-119 tr|C1A0V7|C1A0V7_RHOE4 Tax_Id=234621 (rluD)RecName: Full=Pseudou... 430 e-118 tr|Q0SHT7|Q0SHT7_RHOSR Tax_Id=101510 RecName: Full=Pseudouridine... 428 e-118 tr|Q5YYV8|Q5YYV8_NOCFA Tax_Id=37329 RecName: Full=Pseudouridine ... 426 e-117 tr|C2ATQ1|C2ATQ1_TSUPA Tax_Id=521096 SubName: Full=Ribosomal lar... 418 e-115 tr|D0LAR0|D0LAR0_9ACTO Tax_Id=526226 SubName: Full=Pseudouridine... 409 e-112 tr|A4FLT2|A4FLT2_SACEN Tax_Id=405948 (rlu)RecName: Full=Pseudour... 384 e-105 tr|C5VD57|C5VD57_9CORY Tax_Id=553207 RecName: Full=Pseudouridine... 384 e-105 tr|C0E4Q3|C0E4Q3_9CORY Tax_Id=566549 RecName: Full=Pseudouridine... 384 e-105 tr|Q8NNQ0|Q8NNQ0_CORGL Tax_Id=1718 (rluD)RecName: Full=Pseudouri... 382 e-104 tr|A4QFK2|A4QFK2_CORGB Tax_Id=340322 RecName: Full=Pseudouridine... 382 e-104 tr|C6WDC3|C6WDC3_ACTMD Tax_Id=446462 RecName: Full=Pseudouridine... 380 e-103 tr|Q6NGE3|Q6NGE3_CORDI Tax_Id=1717 (rluC)RecName: Full=Pseudouri... 379 e-103 tr|Q8FNW1|Q8FNW1_COREF Tax_Id=152794 RecName: Full=Pseudouridine... 375 e-102 tr|C8NPY9|C8NPY9_COREF Tax_Id=196164 (rluD)SubName: Full=RluA fa... 375 e-102 tr|C7MV79|C7MV79_SACVD Tax_Id=471857 RecName: Full=Pseudouridine... 368 e-100 tr|C9YVD8|C9YVD8_STRSW Tax_Id=680198 SubName: Full=Putative RNA ... 366 2e-99 tr|B1W0K1|B1W0K1_STRGG Tax_Id=455632 RecName: Full=Pseudouridine... 364 6e-99 tr|C5BW50|C5BW50_BEUC1 Tax_Id=471853 SubName: Full=Pseudouridine... 363 1e-98 tr|C9NJZ3|C9NJZ3_9ACTO Tax_Id=591167 SubName: Full=Pseudouridine... 363 2e-98 tr|Q9S2X8|Q9S2X8_STRCO Tax_Id=1902 SubName: Full=Putative riboso... 362 3e-98 tr|C4LI66|C4LI66_CORK4 Tax_Id=645127 RecName: Full=Pseudouridine... 362 3e-98 tr|Q4JW79|Q4JW79_CORJK Tax_Id=306537 (rluD)RecName: Full=Pseudou... 362 4e-98 tr|C8RRB7|C8RRB7_CORJE Tax_Id=525262 (rluD)SubName: Full=RluA fa... 362 4e-98 tr|B5GXR0|B5GXR0_STRCL Tax_Id=443255 RecName: Full=Pseudouridine... 362 4e-98 tr|B5GH80|B5GH80_9ACTO Tax_Id=465543 RecName: Full=Pseudouridine... 362 4e-98 tr|B4V3B1|B4V3B1_9ACTO Tax_Id=465541 SubName: Full=Ribosomal lar... 361 7e-98 >tr|Q9X7E8|Q9X7E8_MYCLE Tax_Id=1769 (rluC)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium leprae] Length = 308 Score = 567 bits (1462), Expect = e-160 Identities = 285/308 (92%), Positives = 286/308 (92%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 +TDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL Sbjct: 1 MTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRLCEAPAPLENTPVDIEDMTILYS GPTVLGGLAAAG Sbjct: 61 QVRLCEAPAPLENTPVDIEDMTILYSDDDIVAVDKPAAVAAHASVGWAGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH Sbjct: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA Sbjct: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 Query: 301 LDVLRAES 308 LDVLRAES Sbjct: 301 LDVLRAES 308 >tr|B8ZR77|B8ZR77_MYCLB Tax_Id=561304 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium leprae] Length = 308 Score = 567 bits (1462), Expect = e-160 Identities = 285/308 (92%), Positives = 286/308 (92%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 +TDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL Sbjct: 1 MTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRLCEAPAPLENTPVDIEDMTILYS GPTVLGGLAAAG Sbjct: 61 QVRLCEAPAPLENTPVDIEDMTILYSDDDIVAVDKPAAVAAHASVGWAGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH Sbjct: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA Sbjct: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 Query: 301 LDVLRAES 308 LDVLRAES Sbjct: 301 LDVLRAES 308 >tr|Q740U1|Q740U1_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium paratuberculosis] Length = 308 Score = 513 bits (1322), Expect = e-144 Identities = 256/307 (83%), Positives = 270/307 (87%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 +T+RSMP+PEGLAGMRVDAGLARLLGLSR+A AALAEDGGVELDGV AGKSDRLT GAWL Sbjct: 1 MTERSMPVPEGLAGMRVDAGLARLLGLSRSAAAALAEDGGVELDGVPAGKSDRLTGGAWL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 VRL EAPAP +NTPVDIE MTILYS GPTVLGGLAAAG Sbjct: 61 HVRLPEAPAPPQNTPVDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGVPERQGIVHRLDVGTSGVM+VA+SERAYT+LKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVPERQGIVHRLDVGTSGVMVVALSERAYTLLKRAFKQRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRG WKFAVTKDGRHS+THYDT+EAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGGEWKFAVTKDGRHSLTHYDTVEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 F+ LH PCCGDLVYGADPKLAK+LGL+RQWLHARSLSFAHPADGRR+EIVS YPPDLQHA Sbjct: 241 FSALHHPCCGDLVYGADPKLAKKLGLQRQWLHARSLSFAHPADGRRMEIVSPYPPDLQHA 300 Query: 301 LDVLRAE 307 LDVLR E Sbjct: 301 LDVLRDE 307 >sp|P0A5T3|Y1567_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized RNA pseudouridine synthase Mb1567; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium bovis] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >sp|P0A5T2|Y1540_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized RNA pseudouridine synthase Rv1540/MT1592; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium tuberculosis] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|C6DSQ2|C6DSQ2_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|C1ANH6|C1ANH6_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium bovis] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|A5U2P7|A5U2P7_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|A1KIX0|A1KIX0_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium bovis] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|A5WMM7|A5WMM7_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|A4KH86|A4KH86_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis str. Haarlem] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|A2VI57|A2VI57_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis C] Length = 308 Score = 503 bits (1296), Expect = e-141 Identities = 252/307 (82%), Positives = 266/307 (86%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 + DRSMP+P+GLAGMRVD GLARLLGLSRTA AALAE+G VEL+GV AGKSDRL SGA L Sbjct: 1 MADRSMPVPDGLAGMRVDTGLARLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 QVRL EAPAPL+NTP+DIE MTILYS GPTVLGGLAAAG Sbjct: 61 QVRLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 YRITTSGV ERQGIVHRLDVGTSGVM+VAISERAYTVLKRAFK RTVDKRYHALVQGHPD Sbjct: 121 YRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFA+TK+GRHS+THYDTLEAFVAASLLDVHLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YP DLQHA Sbjct: 241 FAALHHPCCGDLVYGADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPADLQHA 300 Query: 301 LDVLRAE 307 L +LR E Sbjct: 301 LKILRGE 307 >tr|A0PNY1|A0PNY1_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium ulcerans] Length = 345 Score = 497 bits (1280), Expect = e-139 Identities = 249/302 (82%), Positives = 264/302 (87%) Query: 3 DRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQV 62 DRSMP+PEGLAGMRVDAGLARLLGLSR+AVA +AE+GGVELDGV AGKSDRLT+GAWL V Sbjct: 4 DRSMPVPEGLAGMRVDAGLARLLGLSRSAVAVIAENGGVELDGVPAGKSDRLTAGAWLHV 63 Query: 63 RLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYR 122 +L EAP P ENTPV+IE MTILYS GPTVLGGLAAAGYR Sbjct: 64 QLPEAPPPPENTPVEIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAGYR 123 Query: 123 ITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPS 182 I+TSGV ERQGIVHRLDVGTSGVM+VA+SERAYTVLKRAFK RTVDKRYHALVQGHPDPS Sbjct: 124 ISTSGVHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVDKRYHALVQGHPDPS 183 Query: 183 SGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFA 242 SGTIDAPIGRH G WKFAVTK+GRHS+THYDT+EAFVAASLLDVHLETGRTHQIR HFA Sbjct: 184 SGTIDAPIGRHPGGEWKFAVTKNGRHSLTHYDTVEAFVAASLLDVHLETGRTHQIRVHFA 243 Query: 243 ELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALD 302 LH PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YPPDLQHALD Sbjct: 244 ALHHPCCGDLVYGADPKLAKRLGLQRQWLHARSLAFAHPADGRRVEIVSPYPPDLQHALD 303 Query: 303 VL 304 VL Sbjct: 304 VL 305 >tr|B2HQ68|B2HQ68_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium marinum] Length = 303 Score = 494 bits (1273), Expect = e-138 Identities = 248/302 (82%), Positives = 263/302 (87%) Query: 6 MPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVRLC 65 MP+PEGLAGMRVDAGLARLLGLSR+AVA +AE+GGVELDGV AGKSDRLT+GAWL V+L Sbjct: 1 MPVPEGLAGMRVDAGLARLLGLSRSAVAVIAENGGVELDGVPAGKSDRLTAGAWLHVQLP 60 Query: 66 EAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRITT 125 EAP P ENTPV+IE MTILYS GPTVLGGLAAAGYRI+T Sbjct: 61 EAPPPPENTPVEIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAGYRIST 120 Query: 126 SGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSSGT 185 SGV ERQGIVHRLDVGTSGVM+VA+SERAYTVLKRAFK RTVDKRYHALVQGHPDPSSGT Sbjct: 121 SGVHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVDKRYHALVQGHPDPSSGT 180 Query: 186 IDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAELH 245 IDAPIGRH G WKFAVTK+GRHS+THYDT+EAFVAASLLDVHLETGRTHQIR HFA LH Sbjct: 181 IDAPIGRHPGGEWKFAVTKNGRHSLTHYDTVEAFVAASLLDVHLETGRTHQIRVHFAALH 240 Query: 246 RPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDVLR 305 PCCGDLVYGADPKLAKRLGL+RQWLHARSL+FAHPADGRRVEIVS YPPDLQHALDVLR Sbjct: 241 HPCCGDLVYGADPKLAKRLGLQRQWLHARSLAFAHPADGRRVEIVSPYPPDLQHALDVLR 300 Query: 306 AE 307 E Sbjct: 301 DE 302 >tr|A0QHM4|A0QHM4_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium avium] Length = 294 Score = 489 bits (1258), Expect = e-136 Identities = 245/293 (83%), Positives = 256/293 (87%) Query: 15 MRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVRLCEAPAPLENT 74 MRVDAGLARLLGLSR+A AALAEDGGVELDGV AGKSDRLT GAWL VRL EAPAP +NT Sbjct: 1 MRVDAGLARLLGLSRSAAAALAEDGGVELDGVPAGKSDRLTGGAWLHVRLPEAPAPPQNT 60 Query: 75 PVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRITTSGVPERQGI 134 PVDIE MTILYS GPTVLGGLAAAGYRITTSGVPERQGI Sbjct: 61 PVDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAGYRITTSGVPERQGI 120 Query: 135 VHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSSGTIDAPIGRHR 194 VHRLDVGTSGVM+VA+SERAYT+LKRAFK RTVDKRYHALVQGHPDPSSGTIDAPIGRHR Sbjct: 121 VHRLDVGTSGVMVVALSERAYTLLKRAFKQRTVDKRYHALVQGHPDPSSGTIDAPIGRHR 180 Query: 195 GHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAELHRPCCGDLVY 254 G WKFAVTKDGRHS+THYDT+EAFVAASLLDVHLETGRTHQIR HF+ LH PCCGDLVY Sbjct: 181 GGEWKFAVTKDGRHSLTHYDTVEAFVAASLLDVHLETGRTHQIRVHFSALHHPCCGDLVY 240 Query: 255 GADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDVLRAE 307 GADPKLAK+LGL+RQWLHARSLSFAHPADGRR+EIVS YPPDLQHALDVLR E Sbjct: 241 GADPKLAKKLGLQRQWLHARSLSFAHPADGRRMEIVSPYPPDLQHALDVLRDE 293 >tr|A1T8T1|A1T8T1_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium vanbaalenii] Length = 309 Score = 481 bits (1238), Expect = e-134 Identities = 237/305 (77%), Positives = 258/305 (84%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 +T RSMP+PEGLAGMRVDAGLARLLGLSRTA AA+AE+GGVELDG +A KSD+LT+GAWL Sbjct: 1 MTTRSMPVPEGLAGMRVDAGLARLLGLSRTAAAAIAEEGGVELDGARAAKSDKLTAGAWL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 +VRL EAPAP+ENTPVDIE M ILYS GPTVLGGLAAAG Sbjct: 61 EVRLPEAPAPVENTPVDIEGMGILYSDEDIVAVDKPPGVAAHATVGWHGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 +RI+TSG+ ERQGIVHRLDVGTSGVM+VA+SERAYT LKRAFK RTV+KRYHALVQGHPD Sbjct: 121 FRISTSGIHERQGIVHRLDVGTSGVMVVALSERAYTALKRAFKQRTVEKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFAV + GRHS+THYDTLEA AASLLD+ LETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHDWKFAVVEGGRHSVTHYDTLEAHQAASLLDIELETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDL YGADP LAK+LGLERQWLHARSL+F HPADGRR+EI S YP DLQHA Sbjct: 241 FAALHHPCCGDLTYGADPTLAKKLGLERQWLHARSLAFVHPADGRRIEITSPYPADLQHA 300 Query: 301 LDVLR 305 LDVLR Sbjct: 301 LDVLR 305 >tr|Q1B7D5|Q1B7D5_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 304 Score = 480 bits (1235), Expect = e-133 Identities = 234/300 (78%), Positives = 256/300 (85%) Query: 6 MPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVRLC 65 MP+PEGL GMRVDAGL+RLLGLSRTA AA+AEDGGV++DG AGKSDRLT+GAWL+VRL Sbjct: 1 MPVPEGLGGMRVDAGLSRLLGLSRTAAAAIAEDGGVDIDGAPAGKSDRLTAGAWLEVRLP 60 Query: 66 EAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRITT 125 EAP P+ENTPV+IE M +LYS GPTVLGGLAAAG+RI+T Sbjct: 61 EAPPPVENTPVEIEGMAVLYSDDDIVAVDKPPGVAAHATVGWHGPTVLGGLAAAGFRIST 120 Query: 126 SGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSSGT 185 SG+ ERQGIVHRLDVGTSGVM+VA+SERAYTVLKRAFK RTV+KRYHALVQGHPDPSSGT Sbjct: 121 SGIHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVEKRYHALVQGHPDPSSGT 180 Query: 186 IDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAELH 245 IDAPIGRHRGH WKFAVT+ GRHS+THYDTLEAF AASLLD+ LETGRTHQIR HFA LH Sbjct: 181 IDAPIGRHRGHDWKFAVTEGGRHSVTHYDTLEAFQAASLLDIELETGRTHQIRVHFAALH 240 Query: 246 RPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDVLR 305 PCCGDL YGADP LA+RLGLERQWLHARSL+FAHPADGRR+EI S YP DLQHALDVLR Sbjct: 241 HPCCGDLTYGADPTLARRLGLERQWLHARSLAFAHPADGRRIEITSPYPADLQHALDVLR 300 >tr|A1UHN8|A1UHN8_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 304 Score = 480 bits (1235), Expect = e-133 Identities = 234/300 (78%), Positives = 256/300 (85%) Query: 6 MPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVRLC 65 MP+PEGL GMRVDAGL+RLLGLSRTA AA+AEDGGV++DG AGKSDRLT+GAWL+VRL Sbjct: 1 MPVPEGLGGMRVDAGLSRLLGLSRTAAAAIAEDGGVDIDGAPAGKSDRLTAGAWLEVRLP 60 Query: 66 EAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRITT 125 EAP P+ENTPV+IE M +LYS GPTVLGGLAAAG+RI+T Sbjct: 61 EAPPPVENTPVEIEGMAVLYSDDDIVAVDKPPGVAAHATVGWHGPTVLGGLAAAGFRIST 120 Query: 126 SGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSSGT 185 SG+ ERQGIVHRLDVGTSGVM+VA+SERAYTVLKRAFK RTV+KRYHALVQGHPDPSSGT Sbjct: 121 SGIHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVEKRYHALVQGHPDPSSGT 180 Query: 186 IDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAELH 245 IDAPIGRHRGH WKFAVT+ GRHS+THYDTLEAF AASLLD+ LETGRTHQIR HFA LH Sbjct: 181 IDAPIGRHRGHDWKFAVTEGGRHSVTHYDTLEAFQAASLLDIELETGRTHQIRVHFAALH 240 Query: 246 RPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDVLR 305 PCCGDL YGADP LA+RLGLERQWLHARSL+FAHPADGRR+EI S YP DLQHALDVLR Sbjct: 241 HPCCGDLTYGADPTLARRLGLERQWLHARSLAFAHPADGRRIEITSPYPADLQHALDVLR 300 >tr|A3Q164|A3Q164_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 304 Score = 477 bits (1227), Expect = e-133 Identities = 233/300 (77%), Positives = 255/300 (85%) Query: 6 MPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVRLC 65 MP+PEGL GMRVDAGL+RLLGLSRTA AA+AEDG V++DG AGKSDRLT+GAWL+VRL Sbjct: 1 MPVPEGLGGMRVDAGLSRLLGLSRTAAAAIAEDGRVDIDGAPAGKSDRLTAGAWLEVRLP 60 Query: 66 EAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRITT 125 EAP P+ENTPV+IE M +LYS GPTVLGGLAAAG+RI+T Sbjct: 61 EAPPPVENTPVEIEGMAVLYSDDDIVAVDKPPGVAAHATVGWHGPTVLGGLAAAGFRIST 120 Query: 126 SGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSSGT 185 SG+ ERQGIVHRLDVGTSGVM+VA+SERAYTVLKRAFK RTV+KRYHALVQGHPDPSSGT Sbjct: 121 SGIHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVEKRYHALVQGHPDPSSGT 180 Query: 186 IDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAELH 245 IDAPIGRHRGH WKFAVT+ GRHS+THYDTLEAF AASLLD+ LETGRTHQIR HFA LH Sbjct: 181 IDAPIGRHRGHDWKFAVTEGGRHSVTHYDTLEAFQAASLLDIELETGRTHQIRVHFAALH 240 Query: 246 RPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDVLR 305 PCCGDL YGADP LA+RLGLERQWLHARSL+FAHPADGRR+EI S YP DLQHALDVLR Sbjct: 241 HPCCGDLTYGADPTLARRLGLERQWLHARSLAFAHPADGRRIEITSPYPADLQHALDVLR 300 >tr|A4T9K4|A4T9K4_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine synthase; EC=5.4.99.-; Flags: Precursor;[Mycobacterium gilvum] Length = 309 Score = 476 bits (1225), Expect = e-132 Identities = 235/305 (77%), Positives = 256/305 (83%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 +T RSMP+P+GLAGMRVDAGLARLLGLSRTA AA+AE+GGV++DG A KSD+L +GAWL Sbjct: 1 MTTRSMPVPDGLAGMRVDAGLARLLGLSRTAAAAIAEEGGVDIDGAPAAKSDKLVAGAWL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 +VRL PAP+ENTPVDIE M ILYS GPTVLGGLAAAG Sbjct: 61 EVRLPPPPAPVENTPVDIEGMGILYSDDDIVAVDKPPGVAAHATVGWHGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 +RI+TSG+ ERQGIVHRLDVGTSGVM+VA+SERAYTVLKRAFK RTV+KRYHALVQGHPD Sbjct: 121 FRISTSGIHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVEKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFAV +DGRHSITHYDTLEA AASLLD+ LETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHDWKFAVVEDGRHSITHYDTLEAHQAASLLDIELETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 FA LH PCCGDL YGADP LAK+LGLERQWLHARSL+FAHPADGRRVE S YP DLQHA Sbjct: 241 FAALHHPCCGDLTYGADPTLAKKLGLERQWLHARSLAFAHPADGRRVEFTSPYPADLQHA 300 Query: 301 LDVLR 305 LDVLR Sbjct: 301 LDVLR 305 >tr|A0QX52|A0QX52_MYCS2 Tax_Id=246196 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium smegmatis] Length = 309 Score = 471 bits (1213), Expect = e-131 Identities = 233/302 (77%), Positives = 253/302 (83%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RSMP+PEGLAGMRVDAGL+RLLGLSRT VA LAE+G VELDG A KSD+L +GAWL+VR Sbjct: 4 RSMPVPEGLAGMRVDAGLSRLLGLSRTVVATLAEEGAVELDGAPAAKSDKLVAGAWLEVR 63 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L EAP P+ENTPVDIE M ILYS GPTVLGGLAAAG+RI Sbjct: 64 LPEAPKPVENTPVDIEGMNILYSDADIVAVDKPPGVAAHATVGWHGPTVLGGLAAAGFRI 123 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG+ ERQGIVHRLDVGTSGVM+VA+SERAYTVLKRAFK RTV+KRYHALVQGHPDPSS Sbjct: 124 STSGIHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVEKRYHALVQGHPDPSS 183 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRHRGH WKFAV + GRHS+THYDTLE F AASLLD+ LETGRTHQIR HF+ Sbjct: 184 GTIDAPIGRHRGHDWKFAVVEGGRHSVTHYDTLEMFQAASLLDIELETGRTHQIRVHFSA 243 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGDL YGADP LAKRLGLERQWLHARSL+FAHPADGRRVEI S YP DLQ+ALD+ Sbjct: 244 LHHPCCGDLTYGADPTLAKRLGLERQWLHARSLAFAHPADGRRVEITSPYPDDLQNALDL 303 Query: 304 LR 305 LR Sbjct: 304 LR 305 >tr|B1MC08|B1MC08_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium abscessus] Length = 305 Score = 444 bits (1141), Expect = e-123 Identities = 220/305 (72%), Positives = 246/305 (80%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 +T RS+P+P+GL+GMRVDAGLARLLGLSRTA AALAE+G V LDGV KS++LT+G WL Sbjct: 1 MTSRSLPVPDGLSGMRVDAGLARLLGLSRTAAAALAEEGAVLLDGVAVTKSEKLTAGTWL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 +V L E AP EN IE M ILY+ GPTVLGGLAAAG Sbjct: 61 EVTLPEPKAPPENRVEVIEGMKILYADDDLVAVDKPAGVAAHASVGWTGPTVLGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 +R+TTSGVPER+GIVHRLDVGTSGVM+VA+SE+AYT LKRAFK R V+KRYHALVQGHPD Sbjct: 121 FRMTTSGVPERKGIVHRLDVGTSGVMVVALSEKAYTELKRAFKYRRVEKRYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 PSSGTIDAPIGRHRGH WKFAV +DGRHSITHYDTLEAFVAASLLD+HLETGRTHQIR H Sbjct: 181 PSSGTIDAPIGRHRGHDWKFAVVEDGRHSITHYDTLEAFVAASLLDIHLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 F+ + PCCGDL YGADP LA +LGLERQWLHA+SL+FAHP DGR +EI S YP DL HA Sbjct: 241 FSAIKHPCCGDLTYGADPTLAAKLGLERQWLHAKSLAFAHPGDGRWIEITSEYPEDLAHA 300 Query: 301 LDVLR 305 LDVLR Sbjct: 301 LDVLR 305 >tr|C3JJ29|C3JJ29_RHOER Tax_Id=596309 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus erythropolis SK121] Length = 308 Score = 431 bits (1109), Expect = e-119 Identities = 215/303 (70%), Positives = 241/303 (79%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RSMP+P+GL MRVDAGLARLLGLSRT VAALAE+G V +DGV GKSDRLT+G+WL+V Sbjct: 5 RSMPVPDGLDAMRVDAGLARLLGLSRTVVAALAEEGSVLVDGVAVGKSDRLTAGSWLEVV 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E P PL +E M ILY+ GPTV+GGLAAAG+RI Sbjct: 65 LPEPPRPLTIEATPVEGMEILYADDDVVAVDKPVGVAAHASVGWTGPTVIGGLAAAGFRI 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSGVM+VA SERAYT+LKRAFK RT+DKRYHALVQGHPDPSS Sbjct: 125 STSGAHERQGIVHRLDVGTSGVMVVATSERAYTLLKRAFKQRTIDKRYHALVQGHPDPSS 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH G+ W+F VT DG+ S+THYDT+EAF AASLLDVHLETGRTHQIR HF+ Sbjct: 185 GTIDAPIGRHHGNDWRFTVTADGKPSVTHYDTIEAFQAASLLDVHLETGRTHQIRVHFSA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 L PCCGDL YGADP+LA+RLGLERQWLHA SL FAHPADGR VEI S YP DL+HAL+V Sbjct: 245 LRHPCCGDLTYGADPRLAERLGLERQWLHAVSLGFAHPADGRWVEIKSKYPKDLEHALEV 304 Query: 304 LRA 306 LR+ Sbjct: 305 LRS 307 >tr|C1AU39|C1AU39_RHOOB Tax_Id=632772 (rluD)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus opacus] Length = 308 Score = 430 bits (1106), Expect = e-119 Identities = 216/303 (71%), Positives = 238/303 (78%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RSMP+P+GL MRVDAGLARLLGLSRTAVA L E+G V +DG GKSDRL++G WL+V Sbjct: 5 RSMPVPDGLEAMRVDAGLARLLGLSRTAVAQLTEEGSVLVDGAPVGKSDRLSAGTWLEVE 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E P PL +E M ILY+ GPTV+GGLAAAG+RI Sbjct: 65 LPEPPRPLTIEAEPVEGMEILYADDDVVAVDKPVGVAAHASVGWTGPTVIGGLAAAGFRI 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSGVM+VA SERAYT+LKRAFK RT+DKRYHALVQGHPDPSS Sbjct: 125 STSGAHERQGIVHRLDVGTSGVMVVATSERAYTLLKRAFKQRTIDKRYHALVQGHPDPSS 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRHR + WKFAVT DG+ SITHYDT+EAF AASLLD+HLETGRTHQIR HFA Sbjct: 185 GTIDAPIGRHRSNDWKFAVTADGKPSITHYDTVEAFQAASLLDIHLETGRTHQIRVHFAA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 L PCCGDL YGADP+LA+RLGLERQWLHARSL FAHPADGR VEI S YP DL+ AL V Sbjct: 245 LRHPCCGDLTYGADPRLAERLGLERQWLHARSLGFAHPADGRWVEITSKYPKDLEDALGV 304 Query: 304 LRA 306 LRA Sbjct: 305 LRA 307 >tr|C1A0V7|C1A0V7_RHOE4 Tax_Id=234621 (rluD)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus erythropolis] Length = 308 Score = 430 bits (1105), Expect = e-118 Identities = 214/303 (70%), Positives = 240/303 (79%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RSMP+P+GL MRVDAGLARLLGLSRT VA LAE+G V +DGV GKSDRLT+G+WL+V Sbjct: 5 RSMPVPDGLDAMRVDAGLARLLGLSRTVVATLAEEGSVLVDGVAVGKSDRLTAGSWLEVV 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E P PL +E M ILY+ GPTV+GGLAAAG+RI Sbjct: 65 LPEPPRPLTIEATPVEGMEILYADDDVVAVDKPVGVAAHASVGWTGPTVIGGLAAAGFRI 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSGVM+VA SERAYT+LKRAFK RT+DKRYHALVQGHPDPSS Sbjct: 125 STSGAHERQGIVHRLDVGTSGVMVVATSERAYTLLKRAFKQRTIDKRYHALVQGHPDPSS 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH G+ W+F VT DG+ S+THYDT+EAF AASLLDVHLETGRTHQIR HF+ Sbjct: 185 GTIDAPIGRHHGNDWRFTVTADGKPSVTHYDTIEAFQAASLLDVHLETGRTHQIRVHFSA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 L PCCGDL YGADP+LA+RLGLERQWLHA SL FAHPADGR VEI S YP DL+HAL+V Sbjct: 245 LRHPCCGDLTYGADPRLAERLGLERQWLHAVSLGFAHPADGRWVEIKSKYPKDLEHALEV 304 Query: 304 LRA 306 LR+ Sbjct: 305 LRS 307 >tr|Q0SHT7|Q0SHT7_RHOSR Tax_Id=101510 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus sp.] Length = 302 Score = 428 bits (1101), Expect = e-118 Identities = 215/301 (71%), Positives = 237/301 (78%) Query: 6 MPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVRLC 65 MP+P+GL MRVDAGLARLLGLSRTAVA L E+G V +DG GKSDRL++GAWL+V L Sbjct: 1 MPVPDGLEAMRVDAGLARLLGLSRTAVAQLTEEGSVLVDGAPVGKSDRLSAGAWLEVELP 60 Query: 66 EAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRITT 125 E P PL +E M ILY+ GPTV+GGLAAAG+RI+T Sbjct: 61 EPPRPLTIEAEPVEGMEILYADDDVVAVDKPVGVAAHASVGWTGPTVIGGLAAAGFRIST 120 Query: 126 SGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSSGT 185 SG ERQGIVHRLDVGTSGVM+VA SERAYT+LKRAFK RT+DKRYHALVQGHPDPSSGT Sbjct: 121 SGAHERQGIVHRLDVGTSGVMVVATSERAYTLLKRAFKQRTIDKRYHALVQGHPDPSSGT 180 Query: 186 IDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAELH 245 IDAPIGRHR + WKFAVT DG+ SITHYDT+EAF AASLLD+HLETGRTHQIR HFA L Sbjct: 181 IDAPIGRHRSNDWKFAVTADGKPSITHYDTVEAFQAASLLDIHLETGRTHQIRVHFAALR 240 Query: 246 RPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDVLR 305 PCCGDL YGADP+LA+RLGLERQWLHARSL FAHPADGR VEI S YP DL+ AL VLR Sbjct: 241 HPCCGDLTYGADPRLAERLGLERQWLHARSLGFAHPADGRWVEITSKYPKDLEDALGVLR 300 Query: 306 A 306 A Sbjct: 301 A 301 >tr|Q5YYV8|Q5YYV8_NOCFA Tax_Id=37329 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Nocardia farcinica] Length = 308 Score = 426 bits (1094), Expect = e-117 Identities = 213/302 (70%), Positives = 238/302 (78%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R+MP+P+GL GMRVDAGL+RLLGLSRTAVAAL +G V+LDGV AGKSDRLT+GAWL+V Sbjct: 5 RAMPVPDGLDGMRVDAGLSRLLGLSRTAVAALTAEGSVQLDGVPAGKSDRLTAGAWLEVE 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 E L +E M ILY+ GPTV+GGLAAAGYRI Sbjct: 65 FPEPKRELTVEAAPVEGMKILYADDDIVAVDKPVGVAAHTGVGWSGPTVVGGLAAAGYRI 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSGVM+VA SE AYTVLKRAFK RTV KRYHALVQGHPDPSS Sbjct: 125 STSGAHERQGIVHRLDVGTSGVMVVAQSEHAYTVLKRAFKQRTVSKRYHALVQGHPDPSS 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGR RG+ WKFAVT DGR S+THYDT+EAF AASLLD+HLETGRTHQIR HF+ Sbjct: 185 GTIDAPIGRARGNDWKFAVTADGRPSVTHYDTIEAFQAASLLDIHLETGRTHQIRVHFSA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 + PCCGDL YGADP+LA+RLGL+RQWLHAR+L F HPADGR +EI S YP DL+HALDV Sbjct: 245 IRHPCCGDLTYGADPRLAERLGLQRQWLHARTLGFHHPADGRWLEITSEYPDDLRHALDV 304 Query: 304 LR 305 LR Sbjct: 305 LR 306 >tr|C2ATQ1|C2ATQ1_TSUPA Tax_Id=521096 SubName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.-;[Tsukamurella paurometabola DSM 20162] Length = 308 Score = 418 bits (1075), Expect = e-115 Identities = 210/302 (69%), Positives = 230/302 (76%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R+MP+P+GL G+RVDAG+ARLLGLSRT V+ LA +G V LDG GKSD+L +GA L V Sbjct: 5 RTMPVPDGLDGLRVDAGVARLLGLSRTVVSELAAEGSVTLDGAPVGKSDKLRAGALLDVT 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E PLE + M ILYS GPTV+GGLAAAG+RI Sbjct: 65 LPEPARPLEIVAEPVPGMNILYSDDDIVVVDKPVGVAAHASVGWTGPTVIGGLAAAGFRI 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PERQGIVHRLDVGTSGVM VA+SERAYTVLKRAFK RTVDKRYHALVQGHPDP S Sbjct: 125 STSGAPERQGIVHRLDVGTSGVMAVAVSERAYTVLKRAFKQRTVDKRYHALVQGHPDPMS 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRHR WKFAVTKDG+ SITHYDT+EAF AA+LLDVHLETGRTHQIR HFA Sbjct: 185 GTIDAPIGRHRSSDWKFAVTKDGKPSITHYDTIEAFQAATLLDVHLETGRTHQIRVHFAA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD YG+DP LAK+LGLERQWLHAR+L F HP G VE S YP DLQHALDV Sbjct: 245 LHHPCCGDQTYGSDPVLAKKLGLERQWLHARTLGFTHPTKGEYVEFTSPYPDDLQHALDV 304 Query: 304 LR 305 LR Sbjct: 305 LR 306 >tr|D0LAR0|D0LAR0_9ACTO Tax_Id=526226 SubName: Full=Pseudouridine synthase, RluA family;[Gordonia bronchialis DSM 43247] Length = 308 Score = 409 bits (1052), Expect = e-112 Identities = 205/302 (67%), Positives = 229/302 (75%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R +P+P+GL GMR+DA LAR+LGLSRT VA LA+DG V +DGV GKS RL +GA L V Sbjct: 5 RMLPVPDGLDGMRLDAALARMLGLSRTVVAGLADDGDVTVDGVAVGKSHRLAAGALLHVT 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E PL+ P +ED+ ++Y GPTVLG L AAGYRI Sbjct: 65 LPEPERPLQVEPTPVEDLDVIYHDSDIIVVDKPVGVAAHPSLGWSGPTVLGALDAAGYRI 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PERQGIV RLDVGTSGVM+VA+SERAY+VLKRAFK RTVDK YHALVQGH DP + Sbjct: 125 STSGAPERQGIVSRLDVGTSGVMVVAVSERAYSVLKRAFKQRTVDKGYHALVQGHLDPPT 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH G W+FAVT +G+ SITHY+TLE F AASLLD+HLETGRTHQIR HFA Sbjct: 185 GTIDAPIGRHPGSDWRFAVTANGKPSITHYETLEMFAAASLLDIHLETGRTHQIRVHFAA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD YG DP LAKRLGL+RQWLHARSL FAHPADGRRVE S YP DLQHALDV Sbjct: 245 LHHPCCGDPTYGGDPVLAKRLGLDRQWLHARSLGFAHPADGRRVEFTSPYPHDLQHALDV 304 Query: 304 LR 305 LR Sbjct: 305 LR 306 >tr|A4FLT2|A4FLT2_SACEN Tax_Id=405948 (rlu)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Saccharopolyspora erythraea] Length = 310 Score = 384 bits (987), Expect = e-105 Identities = 196/302 (64%), Positives = 222/302 (73%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL GMRVDAGL++LLGLSRT VA LAE G V LDG AGKSDRL +GAWL+V Sbjct: 5 RTLPVPDGLDGMRVDAGLSKLLGLSRTIVAGLAESGDVVLDGTPAGKSDRLVAGAWLEVT 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L A PLE V +E + IL+ GPTV+GGLAAAG RI Sbjct: 65 LPPAEQPLEVVAVPVEGLRILHQDDDIVVVDKPIGVAVHPSPGWEGPTVVGGLAAAGVRI 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 TSG ERQG+VHRLD GT+GVM+VA SE AY+ LKRAFK RTVDKRYHALVQGHPDPS Sbjct: 125 ATSGASERQGVVHRLDAGTTGVMVVAKSEHAYSTLKRAFKERTVDKRYHALVQGHPDPSR 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPI RH H +KFAV G+ SITHY+T+EAF AASL+DV LETGRTHQIR HFA Sbjct: 185 GTIDAPIDRHPRHDYKFAVVAGGKPSITHYETVEAFRAASLVDVKLETGRTHQIRVHFAA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 + PC GDL YGADP LA+R+GL RQWLHARSL F HP+DGR V S YP DL HA+DV Sbjct: 245 VRHPCVGDLTYGADPVLARRVGLSRQWLHARSLGFEHPSDGRWVSFDSDYPADLAHAVDV 304 Query: 304 LR 305 LR Sbjct: 305 LR 306 >tr|C5VD57|C5VD57_9CORY Tax_Id=553207 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium matruchotii ATCC 14266] Length = 310 Score = 384 bits (987), Expect = e-105 Identities = 195/304 (64%), Positives = 225/304 (74%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RS+P+PEGLA MRVD L++L GLSRT A LA G V +DG A KSD++T GAWL+V Sbjct: 6 RSLPVPEGLADMRVDVALSKLFGLSRTVSADLATKGDVLIDGKPATKSDKITDGAWLEVL 65 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E PL T ++ + ILY+ GPTV+GGLAAAGYRI Sbjct: 66 LPEPQKPLVPTEELVDGLEILYADEDLIAVDKPVGVAAHPTVGWDGPTVVGGLAAAGYRI 125 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PER GIV RLDVGTSGVM+VA SER Y+VLKRAFK RTV K YHALVQGH DP + Sbjct: 126 STSGPPERNGIVQRLDVGTSGVMVVAASERGYSVLKRAFKERTVSKTYHALVQGHMDPLA 185 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTI+A IGRH WKFAVT DG+H++THY+TLEAFVAASLL+VHLETGRTHQIR H + Sbjct: 186 GTIEANIGRHPSSGWKFAVTSDGKHAVTHYETLEAFVAASLLEVHLETGRTHQIRVHMSA 245 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD +YGADP+L+ RLGL RQWLHA L F HPADGR +EI S YPPDL+HAL+V Sbjct: 246 LHHPCCGDPMYGADPQLSARLGLNRQWLHAVKLGFYHPADGRWLEIESPYPPDLRHALEV 305 Query: 304 LRAE 307 LRAE Sbjct: 306 LRAE 309 >tr|C0E4Q3|C0E4Q3_9CORY Tax_Id=566549 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium matruchotii ATCC 33806] Length = 310 Score = 384 bits (987), Expect = e-105 Identities = 195/304 (64%), Positives = 225/304 (74%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RS+P+PEGLA MRVD L++L GLSRT A LA G V +DG A KSD++T GAWL+V Sbjct: 6 RSLPVPEGLADMRVDVALSKLFGLSRTVSADLATKGDVLIDGKPATKSDKITDGAWLEVL 65 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E PL T ++ + ILY+ GPTV+GGLAAAGYRI Sbjct: 66 LPEPQKPLVPTEELVDGLEILYADEDLIAVDKPVGVAAHPTVGWDGPTVVGGLAAAGYRI 125 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PER GIV RLDVGTSGVM+VA SER Y+VLKRAFK RTV K YHALVQGH DP + Sbjct: 126 STSGPPERNGIVQRLDVGTSGVMVVAASERGYSVLKRAFKERTVSKTYHALVQGHMDPLA 185 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTI+A IGRH WKFAVT DG+H++THY+TLEAFVAASLL+VHLETGRTHQIR H + Sbjct: 186 GTIEANIGRHPSSGWKFAVTSDGKHAVTHYETLEAFVAASLLEVHLETGRTHQIRVHMSA 245 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD +YGADP+L+ RLGL RQWLHA L F HPADGR +EI S YPPDL+HAL+V Sbjct: 246 LHHPCCGDPMYGADPQLSARLGLNRQWLHAVKLGFYHPADGRWLEIESPYPPDLRHALEV 305 Query: 304 LRAE 307 LRAE Sbjct: 306 LRAE 309 >tr|Q8NNQ0|Q8NNQ0_CORGL Tax_Id=1718 (rluD)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 310 Score = 382 bits (980), Expect = e-104 Identities = 191/304 (62%), Positives = 226/304 (74%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+PEGLAGMRVDA L++LLG+SRT A LA G V +DG GKS+RL + + L V Sbjct: 7 RTLPVPEGLAGMRVDAALSKLLGISRTVAAELATAGDVSVDGAVVGKSERLVADSMLDVL 66 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E APL + + ILYS GPTV+GGLAAAG+RI Sbjct: 67 LPEPAAPLMPKEEIVPGLDILYSDDDVIAVNKPVGVAAHPTVGWEGPTVVGGLAAAGFRI 126 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PER+GIV RLDVGTSGVM+VA SER YTVLKRAF+ RTVDK YHALVQGHPDP + Sbjct: 127 STSGPPERKGIVQRLDVGTSGVMVVAASERGYTVLKRAFRDRTVDKTYHALVQGHPDPLT 186 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTI+APIGRH W+FAVT +G+H++THY+TLEAF A+LL +HLETGRTHQIR HF+ Sbjct: 187 GTIEAPIGRHPSAGWRFAVTTEGKHAVTHYETLEAFQEATLLKIHLETGRTHQIRVHFSA 246 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD +YG+DP L++RLGL RQWLHA SL F HPADGR +EIVS YP DLQHALDV Sbjct: 247 LHHPCCGDPMYGSDPALSERLGLNRQWLHAVSLGFNHPADGRWMEIVSPYPTDLQHALDV 306 Query: 304 LRAE 307 LR + Sbjct: 307 LREQ 310 >tr|A4QFK2|A4QFK2_CORGB Tax_Id=340322 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 310 Score = 382 bits (980), Expect = e-104 Identities = 191/304 (62%), Positives = 226/304 (74%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+PEGLAGMRVDA L++LLG+SRT A LA G V +DG GKS+RL + + L V Sbjct: 7 RTLPVPEGLAGMRVDAALSKLLGISRTVAAELATAGDVSVDGAVVGKSERLVADSMLDVL 66 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E APL + + ILYS GPTV+GGLAAAG+RI Sbjct: 67 LPEPAAPLMPKEEIVPGLDILYSDDDVIAVNKPVGVAAHPTVGWEGPTVVGGLAAAGFRI 126 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PER+GIV RLDVGTSGVM+VA SER YTVLKRAF+ RTVDK YHALVQGHPDP + Sbjct: 127 STSGPPERKGIVQRLDVGTSGVMVVAASERGYTVLKRAFRDRTVDKTYHALVQGHPDPLT 186 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTI+APIGRH W+FAVT +G+H++THY+TLEAF A+LL +HLETGRTHQIR HF+ Sbjct: 187 GTIEAPIGRHPSAGWRFAVTTEGKHAVTHYETLEAFQEATLLKIHLETGRTHQIRVHFSA 246 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD +YG+DP L++RLGL RQWLHA SL F HPADGR +EIVS YP DLQHALDV Sbjct: 247 LHHPCCGDPMYGSDPALSERLGLNRQWLHAVSLGFNHPADGRWMEIVSPYPTDLQHALDV 306 Query: 304 LRAE 307 LR + Sbjct: 307 LREQ 310 >tr|C6WDC3|C6WDC3_ACTMD Tax_Id=446462 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Actinosynnema mirum] Length = 310 Score = 380 bits (975), Expect = e-103 Identities = 192/305 (62%), Positives = 224/305 (73%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL GMRVDAGLA+LLGLSRT +A+LAE G V LDG AGKSDRL +G+WL++ Sbjct: 6 RTLPVPDGLDGMRVDAGLAKLLGLSRTVIASLAESGDVVLDGRVAGKSDRLVAGSWLELT 65 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E P++ V +E M +L+ GPTV+GGLAAAG R+ Sbjct: 66 LPEPERPVQVQAVPVEGMIVLHEDDDVIVVDKPVGVAVHPSPGWTGPTVVGGLAAAGVRV 125 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQG+VHRLDVGT+GVM+VA SE AY+VLK+AFK RTVDK YHALVQGHPDP Sbjct: 126 STSGAAERQGVVHRLDVGTTGVMVVAKSEHAYSVLKQAFKDRTVDKLYHALVQGHPDPIK 185 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPI RH H +KFAV G+ SITHY+ +EAF AASLLDVHLETGRTHQIR HF+ Sbjct: 186 GTIDAPIDRHPKHDYKFAVMAGGKPSITHYEVVEAFRAASLLDVHLETGRTHQIRVHFSA 245 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 L PC GDL Y ADP LAKRLG+ RQWLHAR L F HPADG VE S YP DL HAL + Sbjct: 246 LKHPCVGDLTYTADPVLAKRLGMSRQWLHARRLGFHHPADGEWVEFTSEYPDDLDHALKL 305 Query: 304 LRAES 308 LR+ES Sbjct: 306 LRSES 310 >tr|Q6NGE3|Q6NGE3_CORDI Tax_Id=1717 (rluC)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium diphtheriae] Length = 308 Score = 379 bits (972), Expect = e-103 Identities = 197/306 (64%), Positives = 226/306 (73%), Gaps = 5/306 (1%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RS+P+PEGLAGMRVDA L++LLG+SRTA A LA G V +DG GKSDRL+ G WL V Sbjct: 6 RSLPVPEGLAGMRVDAALSKLLGISRTAAADLAIAGDVVVDGHCVGKSDRLSEGQWLDVT 65 Query: 64 LCEAPAPLENTPVD--IEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGY 121 L P + TP + IE M ILYS GPTV+GGLAAAG+ Sbjct: 66 L---PEVRDLTPREELIEGMDILYSDDDVIAVNKPVGVAAHPTLGWEGPTVIGGLAAAGF 122 Query: 122 RITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDP 181 RI+TSG PER+GIV RLDVGTSGVM+VA SER Y+VLKRAFK RTV K YH+LVQGH DP Sbjct: 123 RISTSGPPERKGIVQRLDVGTSGVMVVAASERGYSVLKRAFKERTVTKTYHSLVQGHMDP 182 Query: 182 SSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHF 241 SGTIDAPIGRH W+FAVT DG+H++THY+T+EAF ASLL +HLETGRTHQIR H Sbjct: 183 LSGTIDAPIGRHPSAGWRFAVTTDGKHAVTHYETIEAFAEASLLRIHLETGRTHQIRVHM 242 Query: 242 AELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHAL 301 + LH PCCGD +YG+DP L+ RLGL+RQWLHA SL F HPADGR VEI S Y DLQHAL Sbjct: 243 SALHHPCCGDPMYGSDPALSARLGLDRQWLHAVSLGFHHPADGRWVEIESPYSKDLQHAL 302 Query: 302 DVLRAE 307 DVLR+E Sbjct: 303 DVLRSE 308 >tr|Q8FNW1|Q8FNW1_COREF Tax_Id=152794 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium efficiens] Length = 309 Score = 375 bits (962), Expect = e-102 Identities = 188/302 (62%), Positives = 222/302 (73%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+PEGLAGMRVDA L++LLG+SRT A LAE G V +DG KSDRL + + L V Sbjct: 6 RTLPVPEGLAGMRVDAALSKLLGISRTTAAELAEAGDVSVDGSAVRKSDRLVADSMLDVL 65 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E PL + + ILY+ GPTV+GGLAAAG+RI Sbjct: 66 LPEPAQPLVPREEIVPGLDILYADDDLIAVNKPVGVAAHPTVGWEGPTVVGGLAAAGFRI 125 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PER+GIV RLDVGTSGVM+VA SER YTVLKRAF+ RTV K YHALVQGHPDP+ Sbjct: 126 STSGPPERKGIVQRLDVGTSGVMVVAASERGYTVLKRAFRDRTVQKTYHALVQGHPDPTE 185 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTI+APIGRH W+FAVT DG+H++THY+T+EAF A+L+ VHLETGRTHQIR HF+ Sbjct: 186 GTIEAPIGRHPSSGWRFAVTTDGKHAVTHYETIEAFQEATLVKVHLETGRTHQIRVHFSA 245 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD +YG+DP L++RLGL RQWLHA SL F HPADGR +EI S YP DLQHALDV Sbjct: 246 LHHPCCGDPMYGSDPALSERLGLIRQWLHAVSLGFHHPADGRWMEITSPYPDDLQHALDV 305 Query: 304 LR 305 LR Sbjct: 306 LR 307 >tr|C8NPY9|C8NPY9_COREF Tax_Id=196164 (rluD)SubName: Full=RluA family RNA pseudouridine synthase; EC=4.2.1.70;[Corynebacterium efficiens YS-314] Length = 309 Score = 375 bits (962), Expect = e-102 Identities = 188/302 (62%), Positives = 222/302 (73%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+PEGLAGMRVDA L++LLG+SRT A LAE G V +DG KSDRL + + L V Sbjct: 6 RTLPVPEGLAGMRVDAALSKLLGISRTTAAELAEAGDVSVDGSAVRKSDRLVADSMLDVL 65 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E PL + + ILY+ GPTV+GGLAAAG+RI Sbjct: 66 LPEPAQPLVPREEIVPGLDILYADDDLIAVNKPVGVAAHPTVGWEGPTVVGGLAAAGFRI 125 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PER+GIV RLDVGTSGVM+VA SER YTVLKRAF+ RTV K YHALVQGHPDP+ Sbjct: 126 STSGPPERKGIVQRLDVGTSGVMVVAASERGYTVLKRAFRDRTVQKTYHALVQGHPDPTE 185 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTI+APIGRH W+FAVT DG+H++THY+T+EAF A+L+ VHLETGRTHQIR HF+ Sbjct: 186 GTIEAPIGRHPSSGWRFAVTTDGKHAVTHYETIEAFQEATLVKVHLETGRTHQIRVHFSA 245 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD +YG+DP L++RLGL RQWLHA SL F HPADGR +EI S YP DLQHALDV Sbjct: 246 LHHPCCGDPMYGSDPALSERLGLIRQWLHAVSLGFHHPADGRWMEITSPYPDDLQHALDV 305 Query: 304 LR 305 LR Sbjct: 306 LR 307 >tr|C7MV79|C7MV79_SACVD Tax_Id=471857 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Saccharomonospora viridis] Length = 308 Score = 368 bits (944), Expect = e-100 Identities = 190/308 (61%), Positives = 221/308 (71%) Query: 1 VTDRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWL 60 ++ R +P+P+GL GMRVD GLA+LLGLSRT VA LA G V +DG A KSDRLT+G L Sbjct: 1 MSSRMLPVPDGLDGMRVDVGLAKLLGLSRTVVAELAASGDVLIDGKVASKSDRLTAGDLL 60 Query: 61 QVRLCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAG 120 +V L E P E + +E + IL+ GPTV+GGLAAAG Sbjct: 61 EVTLPEPDTPAEVSAEPVEGLRILHEDDDIVVVDKPVGVAVHPSPGWTGPTVVGGLAAAG 120 Query: 121 YRITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPD 180 RI+TSG ERQG+VHRLD GT+GVM+VA SE AY+VLKRAFK RTV K YHALVQGHPD Sbjct: 121 LRISTSGAAERQGVVHRLDAGTTGVMVVAKSEHAYSVLKRAFKERTVSKGYHALVQGHPD 180 Query: 181 PSSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAH 240 P+ GTIDAPI RH + +KFAV G+ SITHY+ +EAF AASL+DV LETGRTHQIR H Sbjct: 181 PTRGTIDAPIDRHPRYDYKFAVVTGGKPSITHYEVIEAFRAASLVDVQLETGRTHQIRVH 240 Query: 241 FAELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHA 300 F+ + PC GDL YGADP LA+RLGL RQWLHAR+L FAHPADGR VE S YP DL A Sbjct: 241 FSAMRHPCVGDLTYGADPVLARRLGLTRQWLHARTLGFAHPADGRWVEFTSEYPADLAAA 300 Query: 301 LDVLRAES 308 LD+LRAES Sbjct: 301 LDILRAES 308 >tr|C9YVD8|C9YVD8_STRSW Tax_Id=680198 SubName: Full=Putative RNA pseudouridine synthase;[Streptomyces scabies] Length = 314 Score = 366 bits (939), Expect = 2e-99 Identities = 184/305 (60%), Positives = 217/305 (71%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL G RVDA ++R+ G SRT A LA G V +DG GKS+R+ GAWL+V Sbjct: 8 RTLPVPDGLEGERVDAAISRMFGFSRTKAAELAAAGKVTVDGSVVGKSERVHGGAWLEVE 67 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 + +APAP++ +E M I++ GPTV+GGLAAAGYRI Sbjct: 68 MPQAPAPVQIVAEPVEGMEIVHDDDDVVVIVKPVGVAAHPSPGWSGPTVIGGLAAAGYRI 127 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSG+M VA SERAYT LKR FK RTVDKRYHALVQGHPDP+S Sbjct: 128 STSGAAERQGIVHRLDVGTSGLMTVAKSERAYTSLKRQFKERTVDKRYHALVQGHPDPTS 187 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH H +K+AVT +G+ S+THYD +EAF AASLLD+ LETGRTHQIR H + Sbjct: 188 GTIDAPIGRHPNHDYKWAVTAEGKPSVTHYDLIEAFRAASLLDIKLETGRTHQIRVHMSA 247 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 PC GDL YGADP LAKRLG+ RQWLHA L F HP DG VE S YP DLQ ALD Sbjct: 248 HRHPCVGDLTYGADPTLAKRLGITRQWLHAVRLGFEHPGDGEWVEFESDYPADLQKALDK 307 Query: 304 LRAES 308 +R E+ Sbjct: 308 VREET 312 >tr|B1W0K1|B1W0K1_STRGG Tax_Id=455632 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Streptomyces griseus subsp. griseus] Length = 313 Score = 364 bits (935), Expect = 6e-99 Identities = 182/305 (59%), Positives = 219/305 (71%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL G RVDA ++R+ G SRT A LA G V++DG AGKS+R+ GAWL+V Sbjct: 8 RTLPVPDGLEGERVDAAISRMFGFSRTKAAELAAAGKVQVDGSVAGKSERVHGGAWLEVE 67 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 + APAP++ +E M I++ G TV+GGLAAAGYRI Sbjct: 68 MPGAPAPVQIVAEPVEGMEIVHDDDDIVVIMKPVGVAAHPSPGWTGTTVIGGLAAAGYRI 127 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSG+M+VA SERAYT+LK F+ R VDK+YHALVQGHPDP S Sbjct: 128 STSGAAERQGIVHRLDVGTSGLMVVAKSERAYTLLKAQFRDRVVDKKYHALVQGHPDPMS 187 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH H +K+AVT +G+ S+THYD +EA+ AASLLD+ LETGRTHQIR H + Sbjct: 188 GTIDAPIGRHPNHDYKWAVTAEGKPSVTHYDLIEAYRAASLLDIKLETGRTHQIRVHMSA 247 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 PC GDL YGADP LAKRLGL RQWLHA L F HP+DG VE S+YP DLQHALD Sbjct: 248 HRHPCVGDLTYGADPTLAKRLGLTRQWLHAVRLGFEHPSDGSWVEFSSTYPADLQHALDT 307 Query: 304 LRAES 308 + AES Sbjct: 308 ISAES 312 >tr|C5BW50|C5BW50_BEUC1 Tax_Id=471853 SubName: Full=Pseudouridine synthase, RluA family; EC=3.2.1.17;[Beutenbergia cavernae] Length = 309 Score = 363 bits (933), Expect = 1e-98 Identities = 186/302 (61%), Positives = 216/302 (71%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 RS+P+P+GLAG RVD G+ARLLGLSR+A A LA G V LDG AGKSDRL +GAWL+V Sbjct: 5 RSLPVPDGLAGERVDVGMARLLGLSRSAAADLAAAGRVLLDGAAAGKSDRLAAGAWLEVE 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L EA P + + M I+YS GPTV+G LAAAG R+ Sbjct: 65 LPEAAEPPQVVAEPVPGMRIVYSDDDVVVVDKPVGVAAHPSPGWSGPTVIGALAAAGVRV 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQG+VHRLDVGTSG+M VA SERAY+VLKRAFK RTV K YHALVQGHPDPS+ Sbjct: 125 STSGAAERQGVVHRLDVGTSGLMAVAKSERAYSVLKRAFKERTVTKVYHALVQGHPDPSA 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH H +K+AV DG+ S+THY+TLEA AASLL+VHLETGRTHQIR H A Sbjct: 185 GTIDAPIGRHPRHDYKWAVVADGKPSVTHYETLEAMPAASLLEVHLETGRTHQIRVHMAA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 + PC GD+ YGADP+LA+RLGL RQWLHA L F HP G E+ S YP DL +L+ Sbjct: 245 VKHPCVGDVTYGADPRLAERLGLTRQWLHAVRLGFEHPVTGEWTEVTSDYPADLAASLEA 304 Query: 304 LR 305 LR Sbjct: 305 LR 306 >tr|C9NJZ3|C9NJZ3_9ACTO Tax_Id=591167 SubName: Full=Pseudouridine synthase, RluA family; EC=3.2.1.17;[Streptomyces flavogriseus ATCC 33331] Length = 313 Score = 363 bits (931), Expect = 2e-98 Identities = 180/305 (59%), Positives = 220/305 (72%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL G RVDA ++R+ G SRT A LA G V++DG AGKS+R+ GAW++V Sbjct: 8 RTLPVPDGLEGERVDAAISRMFGFSRTKAAELAAAGKVQVDGAVAGKSERVHGGAWMEVE 67 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 + +APAP++ +E M I++ G TV+GGLAAAGYRI Sbjct: 68 MPQAPAPVQIVAEPVEGMEIVHDDDDIVVIMKPVGVAAHPSPGWTGTTVIGGLAAAGYRI 127 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSG+M+VA SERAYT+LK F+ R V+K+YHALVQGHPDP S Sbjct: 128 STSGAAERQGIVHRLDVGTSGLMVVAKSERAYTLLKAQFRDRVVEKKYHALVQGHPDPMS 187 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH H +K+AVT +G+ S+THYD +EA+ AASLLD+ LETGRTHQIR H + Sbjct: 188 GTIDAPIGRHPQHDYKWAVTAEGKPSVTHYDLIEAYRAASLLDIKLETGRTHQIRVHMSA 247 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 PC GDL YGADP LAKRLGL RQWLHA L F HPADG VE S+YP DL+HALD Sbjct: 248 HRHPCVGDLTYGADPTLAKRLGLTRQWLHAVRLGFEHPADGGWVEFESTYPDDLRHALDT 307 Query: 304 LRAES 308 + AES Sbjct: 308 IAAES 312 >tr|Q9S2X8|Q9S2X8_STRCO Tax_Id=1902 SubName: Full=Putative ribosomal large subunit pseudouridine synthase;[Streptomyces coelicolor] Length = 314 Score = 362 bits (929), Expect = 3e-98 Identities = 183/305 (60%), Positives = 216/305 (70%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL G RVDA ++R+ G SRT A LA G V++DG GKS+R+ GAWL+V Sbjct: 8 RTLPVPDGLEGERVDAAISRMFGFSRTKAAELAAAGKVQVDGSVVGKSERVHGGAWLEVE 67 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 + +APAP++ +E M I++ GPTV+GGLAAAGYR+ Sbjct: 68 MPQAPAPVQVVAEPVEGMEIVHDDEDVVVVVKPVGVAAHPSPGWSGPTVIGGLAAAGYRV 127 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSG+M VA SERAYT LKR FK RTVDKRYH LVQGHPDP+S Sbjct: 128 STSGAAERQGIVHRLDVGTSGLMAVAKSERAYTSLKRQFKERTVDKRYHTLVQGHPDPTS 187 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH H +K+AVT +G+ S+THYD +EAF AASLLDV LETGRTHQIR H A Sbjct: 188 GTIDAPIGRHPQHDYKWAVTAEGKPSVTHYDLIEAFRAASLLDVKLETGRTHQIRVHMAA 247 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 PC GDL YGADP LAKRL L RQWLHA L F HP G VE S YP DLQ ALD+ Sbjct: 248 HRHPCVGDLTYGADPTLAKRLRLTRQWLHAVRLGFEHPGTGDWVEYASEYPDDLQQALDL 307 Query: 304 LRAES 308 +R E+ Sbjct: 308 VREET 312 >tr|C4LI66|C4LI66_CORK4 Tax_Id=645127 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium kroppenstedtii] Length = 313 Score = 362 bits (929), Expect = 3e-98 Identities = 181/305 (59%), Positives = 218/305 (71%), Gaps = 1/305 (0%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R MP+P GL G+RVD+GL++LLGLSRT VA LA G + +DGV A KSDRLT+ +WL V Sbjct: 5 RRMPVPVGLDGLRVDSGLSKLLGLSRTVVADLASSGDILIDGVPASKSDRLTTDSWLDVT 64 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 L E+ + + ++E M ILYS GPTV GL AAG+R+ Sbjct: 65 LPESRSIADEPAREVEGMDILYSDSDVIVVDKPVGVAAHPTMGWDGPTVTSGLRAAGFRV 124 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG PERQGIV RLDVGTSGVM+VA SERAY++LK+AF+ RTVDK YHALVQGHPDP+ Sbjct: 125 STSGPPERQGIVQRLDVGTSGVMIVAASERAYSLLKQAFRDRTVDKTYHALVQGHPDPTV 184 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPI RH G WKFAV DG+ ++THY T+EAF A+L+ VHLETGRTHQIR HF+ Sbjct: 185 GTIDAPIARHPGAGWKFAVRSDGKRAVTHYSTMEAFREATLVSVHLETGRTHQIRVHFSA 244 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 LH PCCGD +YG+DPKL + LGL RQWLHA SL F HP DG + + S YP DL HAL Sbjct: 245 LHHPCCGDPMYGSDPKLTEHLGLSRQWLHAVSLGFTHP-DGHYMVVESPYPADLDHALTT 303 Query: 304 LRAES 308 LR ++ Sbjct: 304 LRRDN 308 >tr|Q4JW79|Q4JW79_CORJK Tax_Id=306537 (rluD)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium jeikeium] Length = 323 Score = 362 bits (928), Expect = 4e-98 Identities = 191/304 (62%), Positives = 217/304 (71%), Gaps = 2/304 (0%) Query: 3 DRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQV 62 +R MP+P+GLAGMRVD+GL++LLGLSRTAVA LA DG + D GKSDRL +GAWL V Sbjct: 5 NRVMPVPDGLAGMRVDSGLSKLLGLSRTAVAELAADGDILQDQAPVGKSDRLVAGAWLDV 64 Query: 63 RLCEAPAPLENTPV-DIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGY 121 L P L P +E M ILYS GPTV GLAAAG+ Sbjct: 65 TLPAPPRDLAAEPARHVEGMDILYSDEDVIVVDKPVGVAAHPTVGWEGPTVTSGLAAAGF 124 Query: 122 RITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDP 181 RI+TSG PER+GIV RLDVGTSGVM+VA SERAYTVLK AF+ R V K YHALVQGHPDP Sbjct: 125 RISTSGPPERKGIVQRLDVGTSGVMIVAASERAYTVLKNAFRDREVSKTYHALVQGHPDP 184 Query: 182 SSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHF 241 +SGTIDAPIGRH W+F+V +DG+H+ITHYDTLEA ASLL+V LETGRTHQIR HF Sbjct: 185 TSGTIDAPIGRHPSAGWRFSVREDGKHAITHYDTLEAHRQASLLEVKLETGRTHQIRVHF 244 Query: 242 AELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHAL 301 + LH P CGD +YG+DPKLA+RLGL RQWLHA L F HP DG + S YP DLQ AL Sbjct: 245 SALHHPLCGDPMYGSDPKLAERLGLIRQWLHAVELGFPHP-DGSWKTVRSPYPEDLQLAL 303 Query: 302 DVLR 305 D LR Sbjct: 304 DRLR 307 >tr|C8RRB7|C8RRB7_CORJE Tax_Id=525262 (rluD)SubName: Full=RluA family RNA pseudouridine synthase; EC=4.2.1.70;[Corynebacterium jeikeium ATCC 43734] Length = 323 Score = 362 bits (928), Expect = 4e-98 Identities = 191/304 (62%), Positives = 217/304 (71%), Gaps = 2/304 (0%) Query: 3 DRSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQV 62 +R MP+P+GLAGMRVD+GL++LLGLSRTAVA LA DG + D GKSDRL +GAWL V Sbjct: 5 NRVMPVPDGLAGMRVDSGLSKLLGLSRTAVAELAADGDILQDQAPVGKSDRLVAGAWLDV 64 Query: 63 RLCEAPAPLENTPV-DIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGY 121 L P L P +E M ILYS GPTV GLAAAG+ Sbjct: 65 TLPAPPRDLAAEPARHVEGMDILYSDEDVIVVDKPVGVAAHPTVGWEGPTVTSGLAAAGF 124 Query: 122 RITTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDP 181 RI+TSG PER+GIV RLDVGTSGVM+VA SERAYTVLK AF+ R V K YHALVQGHPDP Sbjct: 125 RISTSGPPERKGIVQRLDVGTSGVMIVAASERAYTVLKNAFRDREVSKTYHALVQGHPDP 184 Query: 182 SSGTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHF 241 +SGTIDAPIGRH W+F+V +DG+H+ITHYDTLEA ASLL+V LETGRTHQIR HF Sbjct: 185 TSGTIDAPIGRHPSAGWRFSVREDGKHAITHYDTLEAHRQASLLEVKLETGRTHQIRVHF 244 Query: 242 AELHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHAL 301 + LH P CGD +YG+DPKLA+RLGL RQWLHA L F HP DG + S YP DLQ AL Sbjct: 245 SALHHPLCGDPMYGSDPKLAERLGLIRQWLHAVELGFPHP-DGSWKTVRSPYPEDLQLAL 303 Query: 302 DVLR 305 D LR Sbjct: 304 DRLR 307 >tr|B5GXR0|B5GXR0_STRCL Tax_Id=443255 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Streptomyces clavuligerus ATCC 27064] Length = 313 Score = 362 bits (928), Expect = 4e-98 Identities = 182/305 (59%), Positives = 218/305 (71%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL G RVDA ++R+ G SRT A LA G V +DG GKS+R+ GAWL+V Sbjct: 8 RTLPVPDGLEGERVDAAISRMFGFSRTKAAELAAAGKVLVDGAAVGKSERVHGGAWLEVE 67 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 + +APAP++ +E M I++ G TV+GGLAAAGYRI Sbjct: 68 MPQAPAPVQIVAEPVEGMEIVHDDDDIVVIVKPVGVAAHPSPGWTGTTVIGGLAAAGYRI 127 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSG+M+VA SERAYT+LK+ F+ RTVDKRYHALVQGHPDP S Sbjct: 128 STSGAAERQGIVHRLDVGTSGLMVVAKSERAYTLLKQQFRDRTVDKRYHALVQGHPDPMS 187 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH H +K+AVT +G+ S+THYD LEAF AASLLD+ LETGRTHQIR H + Sbjct: 188 GTIDAPIGRHPNHDYKWAVTAEGKPSVTHYDLLEAFRAASLLDIKLETGRTHQIRVHMSA 247 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 PC GDL YGADP +AKRLGL RQWLHA L F HP+DGR VE S YP DL+ ALD Sbjct: 248 HRHPCVGDLTYGADPTMAKRLGLTRQWLHAVRLGFEHPSDGRWVEYESGYPDDLRLALDK 307 Query: 304 LRAES 308 + ES Sbjct: 308 IAEES 312 >tr|B5GH80|B5GH80_9ACTO Tax_Id=465543 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Streptomyces sp. SPB74] Length = 313 Score = 362 bits (928), Expect = 4e-98 Identities = 184/305 (60%), Positives = 213/305 (69%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL G RVDA L+R+ G SRT A LA G V++DG GKS+R+ GAWL+V Sbjct: 8 RTLPVPDGLEGERVDAALSRMFGFSRTKAAELAAGGKVQVDGSVVGKSERVRGGAWLEVE 67 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 + A AP+ +E M I++ GPTV+GGLAAAGYRI Sbjct: 68 MPAAAAPVRIVAEPVEGMEIVHDDEDVVVIMKPVGVAAHPSPGWTGPTVIGGLAAAGYRI 127 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQGIVHRLDVGTSG+M+VA SERAYT LK F+ RTVDKRYH LVQGHPDP+S Sbjct: 128 STSGAAERQGIVHRLDVGTSGLMVVAKSERAYTSLKNQFRVRTVDKRYHTLVQGHPDPTS 187 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH H +K+AVT +G+ S+THYD +EAF AASLLDV LETGRTHQIR H A Sbjct: 188 GTIDAPIGRHPQHDYKWAVTAEGKPSVTHYDLIEAFRAASLLDVKLETGRTHQIRVHMAA 247 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 PC GDL YGADP LAKRLGL RQWLHA L F HP G E S YP DLQ ALD Sbjct: 248 HRHPCAGDLTYGADPTLAKRLGLTRQWLHAVRLGFTHPGTGDWAEYASDYPEDLQRALDR 307 Query: 304 LRAES 308 +RAES Sbjct: 308 VRAES 312 >tr|B4V3B1|B4V3B1_9ACTO Tax_Id=465541 SubName: Full=Ribosomal large subunit pseudouridine synthase;[Streptomyces sp. Mg1] Length = 313 Score = 361 bits (926), Expect = 7e-98 Identities = 183/305 (60%), Positives = 214/305 (70%) Query: 4 RSMPIPEGLAGMRVDAGLARLLGLSRTAVAALAEDGGVELDGVQAGKSDRLTSGAWLQVR 63 R++P+P+GL G RVDA +AR+ G SRT A LA G V +DG GKS+R+ GAWL+V Sbjct: 8 RTLPVPDGLEGERVDAAIARMFGFSRTKAAELAAAGKVSVDGSVVGKSERVHGGAWLEVE 67 Query: 64 LCEAPAPLENTPVDIEDMTILYSXXXXXXXXXXXXXXXXXXXXXXGPTVLGGLAAAGYRI 123 + P P+E + M I++ G TV+GGLAAAGYRI Sbjct: 68 MPAPPRPVELVAEPVPGMEIVHDDDDIVVVMKPVGVAAHPSPGWTGTTVIGGLAAAGYRI 127 Query: 124 TTSGVPERQGIVHRLDVGTSGVMLVAISERAYTVLKRAFKCRTVDKRYHALVQGHPDPSS 183 +TSG ERQG+VHRLDVGTSG+M VA SERAYT LK F+ R VDKRYHALVQGHPDP S Sbjct: 128 STSGASERQGVVHRLDVGTSGLMAVAKSERAYTSLKNQFRERVVDKRYHALVQGHPDPMS 187 Query: 184 GTIDAPIGRHRGHTWKFAVTKDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRAHFAE 243 GTIDAPIGRH +K+AVT+DG+ S+THYD +EAF AASLLD+ LETGRTHQIR H + Sbjct: 188 GTIDAPIGRHPNADYKWAVTQDGKASVTHYDLIEAFRAASLLDIKLETGRTHQIRVHMSA 247 Query: 244 LHRPCCGDLVYGADPKLAKRLGLERQWLHARSLSFAHPADGRRVEIVSSYPPDLQHALDV 303 PC GDL YGADP +AKRLGL RQWLHA L F HPADG VE S+YP DLQHALDV Sbjct: 248 HRHPCVGDLTYGADPTVAKRLGLTRQWLHAVRLGFEHPADGSWVEFESTYPADLQHALDV 307 Query: 304 LRAES 308 +RAES Sbjct: 308 IRAES 312 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.320 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 2,191,042,817 Number of extensions: 86934615 Number of successful extensions: 199962 Number of sequences better than 10.0: 5923 Number of HSP's gapped: 190966 Number of HSP's successfully gapped: 6000 Length of query: 308 Length of database: 3,808,957,724 Length adjustment: 137 Effective length of query: 171 Effective length of database: 2,280,953,706 Effective search space: 390043083726 Effective search space used: 390043083726 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 80 (35.4 bits)