BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML1365 (316 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q49890|XERD_MYCLE Tax_Id=1769 (xerD)RecName: Full=Tyrosine re... 549 e-154 tr|B8ZRH7|B8ZRH7_MYCLB Tax_Id=561304 SubName: Full=Integrase/rec... 549 e-154 tr|B2HR71|B2HR71_MYCMM Tax_Id=216594 (xerD)SubName: Full=Integra... 484 e-135 tr|A0PPB0|A0PPB0_MYCUA Tax_Id=362242 (xerD)SubName: Full=Integra... 481 e-134 tr|A0QH66|A0QH66_MYCA1 Tax_Id=243243 (xerD)SubName: Full=Tyrosin... 478 e-133 tr|Q740E3|Q740E3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 477 e-133 sp|P67636|XERD_MYCTU Tax_Id=1773 (xerD)RecName: Full=Tyrosine re... 466 e-129 sp|P67637|XERD_MYCBO Tax_Id=1765 (xerD)RecName: Full=Tyrosine re... 466 e-129 tr|C6DRX2|C6DRX2_MYCTK Tax_Id=478434 SubName: Full=Integrase;[My... 466 e-129 tr|C1ANX3|C1ANX3_MYCBT Tax_Id=561275 (xerD)SubName: Full=Site-sp... 466 e-129 tr|A5U359|A5U359_MYCTA Tax_Id=419947 (xerD)SubName: Full=Tyrosin... 466 e-129 tr|A1KJB7|A1KJB7_MYCBP Tax_Id=410289 SubName: Full=Probable inte... 466 e-129 tr|A5WN20|A5WN20_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 466 e-129 tr|A4KHL4|A4KHL4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 466 e-129 tr|A2VII4|A2VII4_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 466 e-129 tr|Q1B7T5|Q1B7T5_MYCSS Tax_Id=164756 SubName: Full=Tyrosine reco... 462 e-128 tr|A1UH72|A1UH72_MYCSK Tax_Id=189918 SubName: Full=Tyrosine reco... 462 e-128 tr|A3Q0Q9|A3Q0Q9_MYCSJ Tax_Id=164757 SubName: Full=Tyrosine reco... 461 e-128 tr|A0QYQ5|A0QYQ5_MYCS2 Tax_Id=246196 (xerD)SubName: Full=Tyrosin... 450 e-124 tr|A1TA79|A1TA79_MYCVP Tax_Id=350058 SubName: Full=Tyrosine reco... 449 e-124 tr|A4T9Z2|A4T9Z2_MYCGI Tax_Id=350054 SubName: Full=Tyrosine reco... 436 e-120 tr|B1MB26|B1MB26_MYCA9 Tax_Id=561007 SubName: Full=Tyrosine reco... 409 e-112 tr|Q0SI76|Q0SI76_RHOSR Tax_Id=101510 SubName: Full=Tyrosine reco... 392 e-107 tr|C1A033|C1A033_RHOE4 Tax_Id=234621 (xerD)SubName: Full=Tyrosin... 386 e-105 tr|C3JWI6|C3JWI6_RHOER Tax_Id=596309 (xerD)SubName: Full=Tyrosin... 386 e-105 tr|C2AQV6|C2AQV6_TSUPA Tax_Id=521096 SubName: Full=Tyrosine reco... 352 3e-95 tr|Q5YY88|Q5YY88_NOCFA Tax_Id=37329 (xerD)SubName: Full=Putative... 351 7e-95 tr|D0L944|D0L944_9ACTO Tax_Id=526226 SubName: Full=Tyrosine reco... 345 4e-93 tr|A4FKA7|A4FKA7_SACEN Tax_Id=405948 (xerD)SubName: Full=Integra... 326 2e-87 tr|C0TZK1|C0TZK1_9ACTO Tax_Id=526225 SubName: Full=Tyrosine reco... 325 4e-87 tr|C7MZG5|C7MZG5_SACVD Tax_Id=471857 SubName: Full=Tyrosine reco... 318 4e-85 tr|C1WQW3|C1WQW3_9ACTO Tax_Id=479435 SubName: Full=Tyrosine reco... 314 8e-84 tr|A1SJK8|A1SJK8_NOCSJ Tax_Id=196162 SubName: Full=Tyrosine reco... 312 4e-83 tr|C6WA61|C6WA61_ACTMD Tax_Id=446462 SubName: Full=Tyrosine reco... 309 2e-82 tr|A4X686|A4X686_SALTO Tax_Id=369723 SubName: Full=Tyrosine reco... 309 3e-82 tr|A8LYT7|A8LYT7_SALAI Tax_Id=391037 SubName: Full=Tyrosine reco... 306 3e-81 tr|C4RHX9|C4RHX9_9ACTO Tax_Id=219305 SubName: Full=Tyrosine reco... 306 3e-81 tr|A3TKV3|A3TKV3_9MICO Tax_Id=313589 SubName: Full=Tyrosine reco... 306 3e-81 tr|Q47QN0|Q47QN0_THEFY Tax_Id=269800 SubName: Full=Tyrosine reco... 303 2e-80 tr|C1RJR5|C1RJR5_9CELL Tax_Id=446466 SubName: Full=Tyrosine reco... 298 7e-79 tr|C8XHP9|C8XHP9_NAKMY Tax_Id=479431 SubName: Full=Tyrosine reco... 297 1e-78 tr|A1R5A8|A1R5A8_ARTAT Tax_Id=290340 (xerD)SubName: Full=Tyrosin... 294 1e-77 tr|A0JV45|A0JV45_ARTS2 Tax_Id=290399 SubName: Full=Tyrosine reco... 293 1e-77 tr|A0LUA3|A0LUA3_ACIC1 Tax_Id=351607 SubName: Full=Tyrosine reco... 293 2e-77 tr|B8HGE6|B8HGE6_ARTCA Tax_Id=452863 SubName: Full=Tyrosine reco... 291 9e-77 tr|C2BPU6|C2BPU6_9CORY Tax_Id=525264 (xerD)SubName: Full=Site-sp... 288 6e-76 tr|C6RBP6|C6RBP6_9CORY Tax_Id=553206 (xerD)SubName: Full=Tyrosin... 287 1e-75 tr|C0W3E4|C0W3E4_9ACTO Tax_Id=525246 SubName: Full=Tyrosine reco... 287 1e-75 tr|C5CAL4|C5CAL4_MICLC Tax_Id=465515 SubName: Full=Tyrosine reco... 283 2e-74 tr|C7PVX8|C7PVX8_CATAD Tax_Id=479433 SubName: Full=Tyrosine reco... 281 7e-74 >sp|Q49890|XERD_MYCLE Tax_Id=1769 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium leprae] Length = 316 Score = 549 bits (1414), Expect = e-154 Identities = 287/316 (90%), Positives = 288/316 (91%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 +TTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE Sbjct: 1 MTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDPDSGV GLHRFAVAEGLVDLDVARAVRPPTPGRRLP Sbjct: 61 FLVALRRGDPDSGVAALSAVSAARALIAVRGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSLTVDEVLALLESVGGESRADGP YSTGSRISEAVGLDVDDVDTQART Sbjct: 121 KSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT Sbjct: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 Query: 301 VQALREVWAGAHPRAK 316 VQALREVWAGAHPRAK Sbjct: 301 VQALREVWAGAHPRAK 316 >tr|B8ZRH7|B8ZRH7_MYCLB Tax_Id=561304 SubName: Full=Integrase/recombinase;[Mycobacterium leprae] Length = 316 Score = 549 bits (1414), Expect = e-154 Identities = 287/316 (90%), Positives = 288/316 (91%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 +TTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE Sbjct: 1 MTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDPDSGV GLHRFAVAEGLVDLDVARAVRPPTPGRRLP Sbjct: 61 FLVALRRGDPDSGVAALSAVSAARALIAVRGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSLTVDEVLALLESVGGESRADGP YSTGSRISEAVGLDVDDVDTQART Sbjct: 121 KSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT Sbjct: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 Query: 301 VQALREVWAGAHPRAK 316 VQALREVWAGAHPRAK Sbjct: 301 VQALREVWAGAHPRAK 316 >tr|B2HR71|B2HR71_MYCMM Tax_Id=216594 (xerD)SubName: Full=Integrase/recombinase, XerD;[Mycobacterium marinum] Length = 313 Score = 484 bits (1245), Expect = e-135 Identities = 253/315 (80%), Positives = 265/315 (84%), Gaps = 3/315 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 ++T L TQLQGYLD+L IER +AANTLSSYRRDL RYSKHL DRGI DLAKVGE DVSE Sbjct: 1 MSTLTLDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDLAKVGEDDVSE 60 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDP+SGV GLHRFA AEGL LDVARAVRPPTPGRRLP Sbjct: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFAAAEGLAALDVARAVRPPTPGRRLP 120 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSLT+DEVLALLE GG++ ADGP YSTGSRISEAVGLDVDD+DTQART Sbjct: 121 KSLTIDEVLALLEGAGGDNPADGPLTLRNRALLELLYSTGSRISEAVGLDVDDIDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGR +LARRG G TPAIFLNARGGRLSRQS Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRG---TPAIFLNARGGRLSRQS 237 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAE AGITSGVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVT Sbjct: 238 AWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVT 297 Query: 301 VQALREVWAGAHPRA 315 V ALREVWAGAHPRA Sbjct: 298 VHALREVWAGAHPRA 312 >tr|A0PPB0|A0PPB0_MYCUA Tax_Id=362242 (xerD)SubName: Full=Integrase/recombinase, XerD;[Mycobacterium ulcerans] Length = 313 Score = 481 bits (1238), Expect = e-134 Identities = 252/315 (80%), Positives = 264/315 (83%), Gaps = 3/315 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 ++T L TQLQGYLD+L IER +AANTLSSYRRDL RYSKHL DRGI DLAKVGE DVSE Sbjct: 1 MSTLTLDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDLAKVGEDDVSE 60 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDP+SGV GLHRFA AEGL LDVARAVRPPTPGRRLP Sbjct: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFAAAEGLAALDVARAVRPPTPGRRLP 120 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSLT+DEVLALLE GG++ ADGP YSTGSRISEAVGLDVDD+DTQART Sbjct: 121 KSLTIDEVLALLEGAGGDNPADGPLTLRNRALLELLYSTGSRISEAVGLDVDDIDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGR +LARRG G TPAIFLNARGGRLSRQS Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRG---TPAIFLNARGGRLSRQS 237 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAE A ITSGVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVT Sbjct: 238 AWQVLQDAAERADITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVT 297 Query: 301 VQALREVWAGAHPRA 315 V ALREVWAGAHPRA Sbjct: 298 VHALREVWAGAHPRA 312 >tr|A0QH66|A0QH66_MYCA1 Tax_Id=243243 (xerD)SubName: Full=Tyrosine recombinase XerD;[Mycobacterium avium] Length = 313 Score = 478 bits (1231), Expect = e-133 Identities = 247/316 (78%), Positives = 267/316 (84%), Gaps = 3/316 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 +TT AL+TQLQGYLD+L IER +AANTLSSYRRDL RY+KHLSDRGI DLAKVGE DVS+ Sbjct: 1 MTTVALETQLQGYLDHLTIERGVAANTLSSYRRDLRRYTKHLSDRGISDLAKVGEDDVSD 60 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDPD+G GLHRF AEGL +LDVARAVRPPTPGRRLP Sbjct: 61 FLVALRRGDPDTGAAALSAVSAARALIAVRGLHRFLAAEGLAELDVARAVRPPTPGRRLP 120 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSLT+D+VLALLE+ GGES ADGP YSTG+RISEAVGLDVDDVDTQAR+ Sbjct: 121 KSLTIDQVLALLEAAGGESPADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARS 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLL+GKGGKQRLVP+GRPAV ALDAYLVRGRS+LARRG G TPAIFLN RGGRLSRQS Sbjct: 181 VLLRGKGGKQRLVPIGRPAVAALDAYLVRGRSELARRGRG---TPAIFLNVRGGRLSRQS 237 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAE AGITSGVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYT+VT Sbjct: 238 AWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVT 297 Query: 301 VQALREVWAGAHPRAK 316 V ALREVWA AHPRA+ Sbjct: 298 VHALREVWAEAHPRAR 313 >tr|Q740E3|Q740E3_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 313 Score = 477 bits (1227), Expect = e-133 Identities = 247/316 (78%), Positives = 266/316 (84%), Gaps = 3/316 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 +TT AL+TQLQGYLD+L IER +AANTLSSYRRDL RY+KHLSDRGI DLAKVGE DVSE Sbjct: 1 MTTVALETQLQGYLDHLTIERGVAANTLSSYRRDLRRYTKHLSDRGISDLAKVGEDDVSE 60 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDPD+G GLHRF AEGL +LDVARAVRPPTPGRRLP Sbjct: 61 FLVALRRGDPDTGAAALSAVSAARALIAVRGLHRFLAAEGLAELDVARAVRPPTPGRRLP 120 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSLT+D+VLALLE+ GGES ADGP YSTG+RISEAVGLDVDDVDTQAR+ Sbjct: 121 KSLTIDQVLALLEAAGGESPADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARS 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLL+GKGGKQRLVP+GRPAV ALDAYLVRGR +LARRG G TPAIFLN RGGRLSRQS Sbjct: 181 VLLRGKGGKQRLVPIGRPAVAALDAYLVRGRWELARRGRG---TPAIFLNVRGGRLSRQS 237 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAE AGITSGVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYT+VT Sbjct: 238 AWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVT 297 Query: 301 VQALREVWAGAHPRAK 316 V ALREVWA AHPRA+ Sbjct: 298 VHALREVWAEAHPRAR 313 >sp|P67636|XERD_MYCTU Tax_Id=1773 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium tuberculosis] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >sp|P67637|XERD_MYCBO Tax_Id=1765 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium bovis] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|C6DRX2|C6DRX2_MYCTK Tax_Id=478434 SubName: Full=Integrase;[Mycobacterium tuberculosis] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|C1ANX3|C1ANX3_MYCBT Tax_Id=561275 (xerD)SubName: Full=Site-specific tyrosine recombinase;[Mycobacterium bovis] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|A5U359|A5U359_MYCTA Tax_Id=419947 (xerD)SubName: Full=Tyrosine recombinase;[Mycobacterium tuberculosis] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|A1KJB7|A1KJB7_MYCBP Tax_Id=410289 SubName: Full=Probable integrase/recombinase;[Mycobacterium bovis] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|A5WN20|A5WN20_MYCTF Tax_Id=336982 SubName: Full=Hypothetical integrase/recombinase;[Mycobacterium tuberculosis] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|A4KHL4|A4KHL4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical integrase/recombinase;[Mycobacterium tuberculosis str. Haarlem] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|A2VII4|A2VII4_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 311 Score = 466 bits (1199), Expect = e-129 Identities = 241/311 (77%), Positives = 258/311 (82%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L QLQGYLD+L IER +AANTLSSYRRDL RYSKHL +RGI DLAKVGEHDVSEFLVAL Sbjct: 4 LALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVAL 63 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDPDSG GLHRFA AEGL +LDVARAVRPPTP RRLPKSLT+ Sbjct: 64 RRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTI 123 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 DEVL+LLE GG+ +DGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 124 DEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRG 183 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV ALDAYLVRGR DLARRG G T AIFLNARGGRLSRQSAWQVL Sbjct: 184 KGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGRLSRQSAWQVL 240 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAAE AGIT+GVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 241 QDAAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 301 EVWAGAHPRAR 311 >tr|Q1B7T5|Q1B7T5_MYCSS Tax_Id=164756 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 462 bits (1188), Expect = e-128 Identities = 237/316 (75%), Positives = 261/316 (82%), Gaps = 3/316 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 V +AL QLQGYLD+L IER +AANTLSSYRRDL RYS+HL+ RG+EDLAKV E DVS+ Sbjct: 6 VRRSALDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTESDVSD 65 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDPD+G GLHRFA AEGL D+DVARAV+PPTPGRRLP Sbjct: 66 FLVALRRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTPGRRLP 125 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSL++DEVLALL+ GG+S ADGP YSTG+RISEAVGLD+DDVDT AR+ Sbjct: 126 KSLSIDEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVDTHARS 185 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLL+GKGGKQRLVP+GRPAV ALDAYLVRGR DLARRG G TPAIFLNARGGRLSRQS Sbjct: 186 VLLRGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQS 242 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAE AGITS VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VT Sbjct: 243 AWQVLQDAAERAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVT 302 Query: 301 VQALREVWAGAHPRAK 316 V ALREVWAGAHPRA+ Sbjct: 303 VHALREVWAGAHPRAR 318 >tr|A1UH72|A1UH72_MYCSK Tax_Id=189918 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 462 bits (1188), Expect = e-128 Identities = 237/316 (75%), Positives = 261/316 (82%), Gaps = 3/316 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 V +AL QLQGYLD+L IER +AANTLSSYRRDL RYS+HL+ RG+EDLAKV E DVS+ Sbjct: 6 VRRSALDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTESDVSD 65 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDPD+G GLHRFA AEGL D+DVARAV+PPTPGRRLP Sbjct: 66 FLVALRRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTPGRRLP 125 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSL++DEVLALL+ GG+S ADGP YSTG+RISEAVGLD+DDVDT AR+ Sbjct: 126 KSLSIDEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVDTHARS 185 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLL+GKGGKQRLVP+GRPAV ALDAYLVRGR DLARRG G TPAIFLNARGGRLSRQS Sbjct: 186 VLLRGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQS 242 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAE AGITS VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VT Sbjct: 243 AWQVLQDAAERAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVT 302 Query: 301 VQALREVWAGAHPRAK 316 V ALREVWAGAHPRA+ Sbjct: 303 VHALREVWAGAHPRAR 318 >tr|A3Q0Q9|A3Q0Q9_MYCSJ Tax_Id=164757 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 461 bits (1185), Expect = e-128 Identities = 236/316 (74%), Positives = 261/316 (82%), Gaps = 3/316 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 V +AL QLQGYLD+L IER +AANTLSSYRRDL RYS+HL+ RG+EDLAKV E DVS+ Sbjct: 6 VRRSALDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTESDVSD 65 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLVALRRGDPD+G GLHRFA AEGL D+DVARAV+PPTPGRRLP Sbjct: 66 FLVALRRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTPGRRLP 125 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSL++DEVLALL+ GG+S ADGP YSTG+RISEAVGLD+DDVDT AR+ Sbjct: 126 KSLSIDEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVDTHARS 185 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLL+GKGGKQRLVP+GRPAV ALDAYLVRGR DLARRG G TPAIFLNARGGRLSRQS Sbjct: 186 VLLRGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQS 242 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAA+ AGITS VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VT Sbjct: 243 AWQVLQDAADRAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVT 302 Query: 301 VQALREVWAGAHPRAK 316 V ALREVWAGAHPRA+ Sbjct: 303 VHALREVWAGAHPRAR 318 >tr|A0QYQ5|A0QYQ5_MYCS2 Tax_Id=246196 (xerD)SubName: Full=Tyrosine recombinase XerD;[Mycobacterium smegmatis] Length = 318 Score = 450 bits (1157), Expect = e-124 Identities = 232/313 (74%), Positives = 255/313 (81%), Gaps = 3/313 (0%) Query: 4 AALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLV 63 A L Q+QGYLD+L IER +AANTLSSYRRDL RY++HL RGI+DLA+V E DVS+FLV Sbjct: 9 AVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLV 68 Query: 64 ALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSL 123 ALRRGDPD+GV GLHRFA AEGL + DVARAV+PPTP RRLPKSL Sbjct: 69 ALRRGDPDAGVTALSAVSAARAVVAVRGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSL 128 Query: 124 TVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLL 183 T+DEVLALLE+ GG+S AD P YSTG+RISEAVGLDVDDVDTQAR+VLL Sbjct: 129 TLDEVLALLEAAGGDSEADSPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARSVLL 188 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQ 243 GKGGKQRLVP+GRPAV ALDAYLVRGR DLARRG G TPAIFLNARGGRLSRQSAWQ Sbjct: 189 HGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQSAWQ 245 Query: 244 VLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQA 303 VLQD+AE AGI S VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VTV Sbjct: 246 VLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHT 305 Query: 304 LREVWAGAHPRAK 316 LREVWAGAHPRA+ Sbjct: 306 LREVWAGAHPRAQ 318 >tr|A1TA79|A1TA79_MYCVP Tax_Id=350058 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium vanbaalenii] Length = 317 Score = 449 bits (1155), Expect = e-124 Identities = 230/316 (72%), Positives = 258/316 (81%), Gaps = 3/316 (0%) Query: 1 VTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 V AAL Q QGYLD+L IER +AANTLSSYRRDL RY++HL+ RG+ DLA V E DVSE Sbjct: 5 VDPAALDDQFQGYLDHLAIERGVAANTLSSYRRDLRRYAEHLASRGVTDLAGVAEADVSE 64 Query: 61 FLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 FLV+LRRGDPD+GV GLHRFA AEG+ +DVAR V+PPTPGRRLP Sbjct: 65 FLVSLRRGDPDNGVVPLSAVSAARAVIAVRGLHRFAAAEGITTVDVAREVKPPTPGRRLP 124 Query: 121 KSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART 180 KSL++DEVLALLE+ GG+ ADGP YSTG+RISEAVGLDVDDVDT+AR+ Sbjct: 125 KSLSIDEVLALLEAAGGDGEADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTEARS 184 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 VLL+GKGGKQRL+P+GRPAV ALD YLVRGR DLARRG G TPAIFLNARGGRLSRQS Sbjct: 185 VLLRGKGGKQRLIPIGRPAVSALDNYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQS 241 Query: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 AWQVLQDAAE AGIT+ VSPH+LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VT Sbjct: 242 AWQVLQDAAERAGITATVSPHVLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVT 301 Query: 301 VQALREVWAGAHPRAK 316 V ALREVWAGAHPRA+ Sbjct: 302 VTALREVWAGAHPRAR 317 >tr|A4T9Z2|A4T9Z2_MYCGI Tax_Id=350054 SubName: Full=Tyrosine recombinase XerD;[Mycobacterium gilvum] Length = 314 Score = 436 bits (1120), Expect = e-120 Identities = 224/313 (71%), Positives = 251/313 (80%), Gaps = 3/313 (0%) Query: 4 AALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLV 63 A L QLQGYLD+L IER +AANTLSSYRRDL RY++HL RG+ DLA V E DVSEFLV Sbjct: 5 AVLDGQLQGYLDHLAIERGVAANTLSSYRRDLRRYAEHLKARGVGDLAAVTETDVSEFLV 64 Query: 64 ALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSL 123 ALR GDPD GV GLHRFA AEG+ +DVAR V+PPTP RRLPKSL Sbjct: 65 ALRLGDPDGGVVPLSAVSAARALIAVRGLHRFAAAEGIAAIDVARDVKPPTPSRRLPKSL 124 Query: 124 TVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLL 183 ++DEVLALLE+ GG+S AD P YSTG+RISEAVGLD+DDVDT AR+VLL Sbjct: 125 SIDEVLALLEAAGGDSEADSPLTLRNRALLELLYSTGARISEAVGLDIDDVDTSARSVLL 184 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQ 243 +GKGGKQRL+P+GRPAV AL+ YLVRGR DLARRG G TPAIFLNARGGRLSRQSAWQ Sbjct: 185 RGKGGKQRLIPIGRPAVTALETYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQSAWQ 241 Query: 244 VLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQA 303 VLQDAA AG+T+ VSPH+LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VTV A Sbjct: 242 VLQDAAGRAGVTATVSPHVLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVNA 301 Query: 304 LREVWAGAHPRAK 316 LREVWAGAHPRA+ Sbjct: 302 LREVWAGAHPRAR 314 >tr|B1MB26|B1MB26_MYCA9 Tax_Id=561007 SubName: Full=Tyrosine recombinase XerD;[Mycobacterium abscessus] Length = 315 Score = 409 bits (1051), Expect = e-112 Identities = 216/311 (69%), Positives = 243/311 (78%), Gaps = 3/311 (0%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L ++Q YLD+L +ER +AANTLSSYRRDL RY +HL+DR I+ LA+V E DVS+F+V L Sbjct: 8 LDGEIQSYLDHLDVERGVAANTLSSYRRDLRRYQQHLADRKIDRLAEVCETDVSDFVVTL 67 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 RRGDP +GV GLHRFA EGL DVARAV+PPTP RRLPKSLTV Sbjct: 68 RRGDPANGVPELSASSAARALIAVRGLHRFAAIEGLAPTDVARAVKPPTPNRRLPKSLTV 127 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 ++V ALL + GG +DGP YSTG+RISEAVGLDVDDVD QAR+VLL G Sbjct: 128 EQVEALLNAAGGGG-SDGPLDLRNRALLELLYSTGARISEAVGLDVDDVDVQARSVLLWG 186 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQRLVPVGRPAV+AL AYLVRGR DLARRG G PA+FLN+RGGRLSRQSAWQVL Sbjct: 187 KGGKQRLVPVGRPAVEALQAYLVRGRPDLARRGRG--GVPALFLNSRGGRLSRQSAWQVL 244 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 DAAE A I++ VSPH LRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 245 ADAAERAKISAAVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVSALR 304 Query: 306 EVWAGAHPRAK 316 EVWAGAHPRA+ Sbjct: 305 EVWAGAHPRAR 315 >tr|Q0SI76|Q0SI76_RHOSR Tax_Id=101510 SubName: Full=Tyrosine recombinase;[Rhodococcus sp.] Length = 308 Score = 392 bits (1007), Expect = e-107 Identities = 201/308 (65%), Positives = 238/308 (77%), Gaps = 5/308 (1%) Query: 9 QLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRG 68 Q+ YLD+L +ER A NTL SYRRDL RY++ L+DR + D+ ++ E DVS+F++ALR G Sbjct: 6 QVDSYLDHLAVERGAARNTLGSYRRDLERYTQFLADRELTDIDRIREQDVSDFVIALRSG 65 Query: 69 DPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEV 128 DP+ + G HRFA AEG+ +DVAR VRPP+P +RLPKSL V+EV Sbjct: 66 DPNRELPPLAASSAARALIAVRGFHRFAAAEGMTAVDVARDVRPPSPAKRLPKSLPVNEV 125 Query: 129 LALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQGKGG 188 LALLE+VGG ADGP YSTG+RISEAVGLDVDDVDT+ R+VLL+GKGG Sbjct: 126 LALLEAVGGSGPADGPRAVRDRALLELLYSTGARISEAVGLDVDDVDTETRSVLLRGKGG 185 Query: 189 KQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDA 248 KQR+VPVGRPAV++LDAYL+RGR LA RG TPA+FLN RGGRLSRQSAW+VLQ A Sbjct: 186 KQRVVPVGRPAVESLDAYLIRGRPALASRG-----TPALFLNVRGGRLSRQSAWKVLQAA 240 Query: 249 AEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVW 308 A+ AGI+S VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYTLVTV ALREVW Sbjct: 241 ADAAGISSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVGALREVW 300 Query: 309 AGAHPRAK 316 AGAHPRA+ Sbjct: 301 AGAHPRAR 308 >tr|C1A033|C1A033_RHOE4 Tax_Id=234621 (xerD)SubName: Full=Tyrosine recombinase XerD;[Rhodococcus erythropolis] Length = 307 Score = 386 bits (991), Expect = e-105 Identities = 196/311 (63%), Positives = 237/311 (76%), Gaps = 5/311 (1%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L Q+ YLD+L +ER A NTL SYRRDL RY+++L RGI+D+A V E+DV+EF+ L Sbjct: 2 LARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLDGRGIDDVAGVTENDVTEFVTHL 61 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R GD D+GV G H+F+ AEGLV +DVAR V+PPTPGR+LPK+L + Sbjct: 62 RLGDKDAGVLPLAASSAARTLIAVRGFHKFSAAEGLVGVDVARTVKPPTPGRKLPKALPL 121 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 D+V+ALL++ GG + DGP YSTG+RI+EA+ LDVDD+DT+ R+VLL+G Sbjct: 122 DDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLKG 181 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQR+VPVGRPA+ A+DAYLVRGR LA RG PA+FLNARGGRLSRQSAWQ+L Sbjct: 182 KGGKQRIVPVGRPAIAAVDAYLVRGRPSLATRG-----VPALFLNARGGRLSRQSAWQIL 236 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAA AGI + VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYTLVTV ALR Sbjct: 237 QDAAASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTALR 296 Query: 306 EVWAGAHPRAK 316 EVWA AHPRA+ Sbjct: 297 EVWAQAHPRAR 307 >tr|C3JWI6|C3JWI6_RHOER Tax_Id=596309 (xerD)SubName: Full=Tyrosine recombinase XerD;[Rhodococcus erythropolis SK121] Length = 307 Score = 386 bits (991), Expect = e-105 Identities = 195/311 (62%), Positives = 238/311 (76%), Gaps = 5/311 (1%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L Q+ YLD+L +ER A NTL SYRRDL RY+++L+ RGI+D+A V E+DV+EF+ L Sbjct: 2 LARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLNGRGIDDVAGVTENDVTEFVTHL 61 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R GD D+GV G H+F+ AEGLV +DVAR V+PPTPGR+LPK+L + Sbjct: 62 RLGDKDAGVVPLAASSAARTLIAVRGFHKFSAAEGLVSVDVARTVKPPTPGRKLPKALPL 121 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 D+V+ALL++ GG + DGP YSTG+RI+EA+ LDVDD+DT+ R+VLL+G Sbjct: 122 DDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLKG 181 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQR+VPVGRPA+ A+DAYLVRGR LA RG PA+FLNARGGRLSRQSAWQ+L Sbjct: 182 KGGKQRIVPVGRPAIAAVDAYLVRGRPSLATRG-----VPALFLNARGGRLSRQSAWQIL 236 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 QDAA AGI + VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYTLVTV A+R Sbjct: 237 QDAAASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTAMR 296 Query: 306 EVWAGAHPRAK 316 EVWA AHPRA+ Sbjct: 297 EVWAQAHPRAR 307 >tr|C2AQV6|C2AQV6_TSUPA Tax_Id=521096 SubName: Full=Tyrosine recombinase XerD subunit;[Tsukamurella paurometabola DSM 20162] Length = 324 Score = 352 bits (904), Expect = 3e-95 Identities = 189/313 (60%), Positives = 223/313 (71%), Gaps = 10/313 (3%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L L+ YLD+L +ER AANTLSSYRRDL RY ++L + GI+DLA V VS FLVAL Sbjct: 17 LDEALRAYLDHLTVERGAAANTLSSYRRDLDRYREYLVELGIDDLASVTSTQVSGFLVAL 76 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R G G GLHRFA AEGL DVAR VRPP P +RLPK+L++ Sbjct: 77 REGS--DGRPPLAASSAARSLIAVRGLHRFAAAEGLTASDVAREVRPPAPAKRLPKALSI 134 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 D V+ALLE+ GG+ +D P YS G+RISE LDVDD+D Q+R+V+L G Sbjct: 135 DTVIALLEAAGGDGESDTPSRLRDRALLELLYSCGARISEVTALDVDDIDVQSRSVVLMG 194 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGGKQR+VP+GRPA+ A++AYLVRGR L ++ + PA+FLN RGGRLSRQSAWQVL Sbjct: 195 KGGKQRVVPIGRPALAAIEAYLVRGRPSLVKK-----SNPALFLNVRGGRLSRQSAWQVL 249 Query: 246 QDAAEHAGITSG---VSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQ 302 AAE AGI + VSPH LRHSFATHLLEGGAD+RVVQEL+GHASVTTTQ+YTLVTVQ Sbjct: 250 ATAAERAGIDTDAVHVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTVQ 309 Query: 303 ALREVWAGAHPRA 315 ALREV+A AHPRA Sbjct: 310 ALREVYAQAHPRA 322 >tr|Q5YY88|Q5YY88_NOCFA Tax_Id=37329 (xerD)SubName: Full=Putative recombinase;[Nocardia farcinica] Length = 316 Score = 351 bits (900), Expect = 7e-95 Identities = 192/319 (60%), Positives = 220/319 (68%), Gaps = 12/319 (3%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L ++ YLD+L +ER A NTL +YRRDL RY L++RGI L +V E DV+ F VAL Sbjct: 2 LAREIDAYLDHLAVERGAARNTLGAYRRDLGRYRDFLTERGIGGLEQVREADVAAFTVAL 61 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R G D GLHRFA AEG+ DVA AV+PPTPGRRLPK+L Sbjct: 62 RSGGGDH--PPLAASSVARALIAVRGLHRFAAAEGMTSTDVAHAVKPPTPGRRLPKALPY 119 Query: 126 DEVLALLESVGGESRADG--------PXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQ 177 D+VL LLE+ GG DG P YSTG+RISE VGLDVDD+DT Sbjct: 120 DQVLRLLEAAGGGPAEDGDTAAADGGPRGLRDRALLELLYSTGARISEMVGLDVDDLDTT 179 Query: 178 ARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLS 237 R V+L+GKGGKQR+VP+GRPA+ A+DAYLVRGR LA G G A+FLN RGGRLS Sbjct: 180 ERAVVLRGKGGKQRIVPIGRPALAAVDAYLVRGRPVLAAAGKG--TGGALFLNVRGGRLS 237 Query: 238 RQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYT 297 RQSAWQVLQ AAE AGI + VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT Sbjct: 238 RQSAWQVLQTAAERAGIGAAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYT 297 Query: 298 LVTVQALREVWAGAHPRAK 316 LVTV LREVWA AHPRA+ Sbjct: 298 LVTVSTLREVWATAHPRAR 316 >tr|D0L944|D0L944_9ACTO Tax_Id=526226 SubName: Full=Tyrosine recombinase XerD;[Gordonia bronchialis DSM 43247] Length = 313 Score = 345 bits (885), Expect = 4e-93 Identities = 187/304 (61%), Positives = 214/304 (70%), Gaps = 8/304 (2%) Query: 13 YLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRGDPDS 72 YLD+L +ER A NT++SYRRDL RY +L RGI LA+V E D+ EFLVALRRGD + Sbjct: 18 YLDHLTVERGAAHNTVTSYRRDLERYQNYLIARGISGLAEVTESDIREFLVALRRGDEAT 77 Query: 73 GVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEVLALL 132 G H FAV EG+V DVA AVRPP P RRLPKSL VDEVLA+L Sbjct: 78 GSRPLADSSIARTLVATRRFHGFAVDEGVVSTDVAHAVRPPRPARRLPKSLPVDEVLAIL 137 Query: 133 ESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQGKGGKQRL 192 E+ S D P YS G+RISEA LDVDD+DT AR V L+GKGGK+R+ Sbjct: 138 EA---SSTGDHPRALRDRALLELLYSCGARISEATSLDVDDLDTAARAVRLRGKGGKERI 194 Query: 193 VPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDAAEHA 252 VPVG PA A+DAYLVRGR LA R + PA+FLNARGGRLSRQSAWQVL AAE A Sbjct: 195 VPVGGPAADAIDAYLVRGRPVLATR-----SAPALFLNARGGRLSRQSAWQVLVSAAERA 249 Query: 253 GITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVWAGAH 312 G+ VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQ+YTLVTV +REV+A AH Sbjct: 250 GLDKAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVNTMREVYATAH 309 Query: 313 PRAK 316 PRA+ Sbjct: 310 PRAR 313 >tr|A4FKA7|A4FKA7_SACEN Tax_Id=405948 (xerD)SubName: Full=Integrase/recombinase;[Saccharopolyspora erythraea] Length = 313 Score = 326 bits (836), Expect = 2e-87 Identities = 177/311 (56%), Positives = 215/311 (69%), Gaps = 9/311 (2%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L + GYL++L +ER A +TL SY RDL RY+ HL + G+ L +V +S FL L Sbjct: 11 LSSVFSGYLNHLAVERGTARSTLDSYARDLRRYADHLLESGVRALGEVRSTHLSAFLAEL 70 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R G P+ GLHRFA A+G+V++DVAR + PP+P +RLPK+L V Sbjct: 71 REGGPERPALAQSSAARALIAAR--GLHRFAHADGIVEVDVAREISPPSPPKRLPKALPV 128 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 +VL LL++ GGE YS+G+RISEAVGLDVDDVD RT+LL G Sbjct: 129 SDVLRLLDNTGGED----VRGLRDRALLELLYSSGARISEAVGLDVDDVDEAERTILLDG 184 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGG+QRLVPVGRPA+ AL AY+VR R LA RG G + A+FLN+RG RLSRQSAW L Sbjct: 185 KGGRQRLVPVGRPALAALGAYMVRARPVLAGRGRG---SSAVFLNSRGTRLSRQSAWNAL 241 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 + AAE AGI SGVSPH+LRHSFATHLLEGGAD+RVVQEL+GHASVTTTQ+YTL+TV LR Sbjct: 242 KSAAERAGIGSGVSPHVLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLITVNTLR 301 Query: 306 EVWAGAHPRAK 316 EV A AHPRA+ Sbjct: 302 EVHATAHPRAR 312 >tr|C0TZK1|C0TZK1_9ACTO Tax_Id=526225 SubName: Full=Tyrosine recombinase XerD;[Geodermatophilus obscurus DSM 43160] Length = 304 Score = 325 bits (833), Expect = 4e-87 Identities = 174/304 (57%), Positives = 213/304 (70%), Gaps = 5/304 (1%) Query: 12 GYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRGDPD 71 GYLD+L +ER +AANT+SSYRRDL RY++ L G+ L +V E DV+ FL ALR+GD D Sbjct: 4 GYLDHLTVERGLAANTISSYRRDLRRYTEFLDAAGVRGLGEVAESDVAGFLAALRQGDDD 63 Query: 72 SGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEVLAL 131 GLHRFA+ +GLV DVA VRPP+P RRLPK++ V+ V+AL Sbjct: 64 H--PPLSATSAARAVVAVRGLHRFALLDGLVPDDVAHEVRPPSPARRLPKAIPVESVVAL 121 Query: 132 LESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQGKGGKQR 191 +E+ G +GP Y TG+RISEAVGL VDD+D V L GKGGKQR Sbjct: 122 IEAAGA---LEGPRGLRDRALLELLYGTGARISEAVGLAVDDLDRGQSVVRLAGKGGKQR 178 Query: 192 LVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDAAEH 251 +VPVG A++A++ YLVR R LA G G + A+FLNARGG LSRQSAW +L+ AAE Sbjct: 179 IVPVGSYALRAVEDYLVRARPALAAAGRGGVRGGALFLNARGGSLSRQSAWAILRTAAER 238 Query: 252 AGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVWAGA 311 AG+T+ VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQ+YTLVTV LREV+A + Sbjct: 239 AGLTAEVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDRLREVYASS 298 Query: 312 HPRA 315 HPRA Sbjct: 299 HPRA 302 >tr|C7MZG5|C7MZG5_SACVD Tax_Id=471857 SubName: Full=Tyrosine recombinase XerD subunit;[Saccharomonospora viridis] Length = 311 Score = 318 bits (816), Expect = 4e-85 Identities = 178/310 (57%), Positives = 208/310 (67%), Gaps = 9/310 (2%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L+ + Y+D+L +ER A NT+ Y RDL RY HL+D G+ DL +V V F +L Sbjct: 9 LRVVVAAYVDHLTVERGTARNTVDGYARDLRRYLAHLADAGVTDLRQVARDHVVGFAASL 68 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R G+ D GLHRFA AEG + D AR VRPP RRLPK+L V Sbjct: 69 RHGEGDR--PPLAPSSAARALSAVRGLHRFAHAEGWTEEDPARDVRPPPLTRRLPKALPV 126 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 +VL LL + G D YSTG+RISEA GLDVDDVD RTV+L G Sbjct: 127 ADVLRLLNTPTG----DDARSLRDRALLELLYSTGARISEATGLDVDDVDRAERTVVLDG 182 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVL 245 KGG+QRLVPVGRPA++ALDAYL+R R LA +G G T A+FLNARGGRLSRQ AWQVL Sbjct: 183 KGGRQRLVPVGRPALEALDAYLIRARPALAAKGRG---TGAVFLNARGGRLSRQGAWQVL 239 Query: 246 QDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALR 305 + AAE AGI++ VSPH LRHSFATHLLEGGAD+RVVQEL+GHASVTTTQ+YTLVTV LR Sbjct: 240 KVAAERAGISTPVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTVNTLR 299 Query: 306 EVWAGAHPRA 315 EV+A HPRA Sbjct: 300 EVYATTHPRA 309 >tr|C1WQW3|C1WQW3_9ACTO Tax_Id=479435 SubName: Full=Tyrosine recombinase XerD subunit;[Kribbella flavida DSM 17836] Length = 313 Score = 314 bits (805), Expect = 8e-84 Identities = 170/306 (55%), Positives = 208/306 (67%), Gaps = 5/306 (1%) Query: 10 LQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRGD 69 + YLD+L +ER +AANTL+SYRRDL RY ++L+ GI L +V E V +FL+ LR GD Sbjct: 8 VSAYLDHLTVERGLAANTLASYRRDLRRYDEYLAGAGISALGRVTEAVVGDFLMRLREGD 67 Query: 70 PDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEVL 129 G H+F + EGL +D A AV+PP P +RLPK+L+VDEV Sbjct: 68 EHH--PPLTASSAGRTVVAVRGFHKFCLREGLTVIDPAAAVKPPVPPQRLPKALSVDEVT 125 Query: 130 ALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQGKGGK 189 +L + G Y TG+RISEAVGLDVDDVD ++ VLL+GKG K Sbjct: 126 RILAAAAGADAEPAVLATRDAALLEFLYGTGARISEAVGLDVDDVDLESGQVLLRGKGSK 185 Query: 190 QRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDAA 249 +R+VPVG A +AL AY VRGR DL RG G T A+FLNARGGRLSRQSAW VL+ AA Sbjct: 186 ERVVPVGSYAREALSAYQVRGRPDLVARGRG---THALFLNARGGRLSRQSAWTVLRRAA 242 Query: 250 EHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVWA 309 + AGI+ +SPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQ+YTLVTV LREV+A Sbjct: 243 QRAGISKEISPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDKLREVYA 302 Query: 310 GAHPRA 315 +HPRA Sbjct: 303 TSHPRA 308 >tr|A1SJK8|A1SJK8_NOCSJ Tax_Id=196162 SubName: Full=Tyrosine recombinase XerD;[Nocardioides sp.] Length = 318 Score = 312 bits (799), Expect = 4e-83 Identities = 176/308 (57%), Positives = 210/308 (68%), Gaps = 10/308 (3%) Query: 13 YLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRGDPDS 72 YLD+L +ER +A NTL+SYRRDL RY ++L++ G+E LA V E V+ FLV LR GD D Sbjct: 16 YLDHLTVERGLATNTLTSYRRDLRRYQEYLAECGVEHLADVTEGTVAAFLVRLREGDRDH 75 Query: 73 GVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEVLALL 132 G HRFAVA+GL D A AV+PPTP +RLPK+L + +V A+L Sbjct: 76 PALSATSAARTVVAVR--GFHRFAVADGLAATDPASAVKPPTPAKRLPKALPLADVEAIL 133 Query: 133 ESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQAR----TVLLQGKGG 188 E+ G Y TG+RISEAVGLDVDD+D TVLL+GKGG Sbjct: 134 EAAGAPGTT---LALRDRALLEVLYGTGARISEAVGLDVDDLDWGESGVEGTVLLRGKGG 190 Query: 189 KQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDA 248 K+RLVPVG A +A+DAYLVRGR +L + A+FLNARGGRLSRQSAW VL A Sbjct: 191 KERLVPVGSYAREAVDAYLVRGRPELVAAS-ARVTGGALFLNARGGRLSRQSAWAVLVRA 249 Query: 249 AEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVW 308 AE AG+T VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQ+YTLVTV LREV+ Sbjct: 250 AERAGVTRDVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDNLREVF 309 Query: 309 AGAHPRAK 316 A AHPRA+ Sbjct: 310 ATAHPRAR 317 >tr|C6WA61|C6WA61_ACTMD Tax_Id=446462 SubName: Full=Tyrosine recombinase XerD;[Actinosynnema mirum] Length = 299 Score = 309 bits (792), Expect = 2e-82 Identities = 178/303 (58%), Positives = 204/303 (67%), Gaps = 18/303 (5%) Query: 13 YLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRGDPDS 72 YLD+L +ER A NTL SY RDL RY HL G+ L V E V +FL LR +S Sbjct: 13 YLDHLAVERGAARNTLDSYARDLRRYLAHLESAGL-GLDAVTEAVVGDFLAGLR----ES 67 Query: 73 GVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEVLALL 132 G+ GLHRFA EGL D A+ V+PP RRLPK+L V +VL LL Sbjct: 68 GLAASSAARTLVAVR---GLHRFAHREGLTAADPAKDVQPPAAPRRLPKALPVADVLRLL 124 Query: 133 ESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQGKGGKQRL 192 ++ G D P YSTG+RISE VGLDVDDVD RT LL GKGGKQR+ Sbjct: 125 DTAG-----DTPAALRDRALLELLYSTGARISEVVGLDVDDVDAAERTALLDGKGGKQRV 179 Query: 193 VPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDAAEHA 252 VPVGRPA+ A++AYLVR R LA+RG PA+FLNARGGRLSRQSAWQVL+ AAE A Sbjct: 180 VPVGRPALAAVEAYLVRARPVLAKRGG-----PALFLNARGGRLSRQSAWQVLKTAAERA 234 Query: 253 GITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVWAGAH 312 G+ + VSPH LRHSFATHLLE GAD+RVVQEL+GHASVTTTQ+YTLVTV LREV+A AH Sbjct: 235 GVAAEVSPHTLRHSFATHLLEAGADVRVVQELLGHASVTTTQVYTLVTVTTLREVYATAH 294 Query: 313 PRA 315 PRA Sbjct: 295 PRA 297 >tr|A4X686|A4X686_SALTO Tax_Id=369723 SubName: Full=Tyrosine recombinase XerD;[Salinispora tropica] Length = 325 Score = 309 bits (791), Expect = 3e-82 Identities = 174/317 (54%), Positives = 210/317 (66%), Gaps = 11/317 (3%) Query: 5 ALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVA 64 AL+ ++GYLD+L +ER +AANTL+SYRRDL Y L+ G+ DLA V V L Sbjct: 12 ALRRAVRGYLDHLAVERGLAANTLASYRRDLAHYLDTLASIGVTDLASVAPGQVEAHLAR 71 Query: 65 LRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLT 124 LR G+ G GLHRFA+ EGL D +R VRPP P RRLP++L Sbjct: 72 LRVGN--EGRRPLAASSAARAVSAVRGLHRFALREGLTGADPSRDVRPPAPPRRLPRALP 129 Query: 125 VDEVLALLESVGGESRADG--PXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVL 182 VD+V+ LLE+VG S A G P Y TG+RISEAVG VDD+D A VL Sbjct: 130 VDDVIRLLEAVGPVSAAGGQAPLGLRDRALLEFLYGTGARISEAVGAAVDDLDLDAGAVL 189 Query: 183 LQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAW 242 L+GKGG+ RLVP+G AV AL AYLVR R LA G G TP +FLN+RGG LSRQ AW Sbjct: 190 LRGKGGRNRLVPIGGYAVAALHAYLVRARPGLAAAGGG---TPRVFLNSRGGPLSRQGAW 246 Query: 243 QVLQDAAEHAGITS----GVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTL 298 +L++AA AG++ VSPH LRHS+ATHLL+GGAD+RVVQEL+GHASVTTTQ+YTL Sbjct: 247 TILRNAARRAGLSDVGPQAVSPHTLRHSYATHLLDGGADVRVVQELLGHASVTTTQVYTL 306 Query: 299 VTVQALREVWAGAHPRA 315 VTV+ LREV+A AHPRA Sbjct: 307 VTVERLREVYATAHPRA 323 >tr|A8LYT7|A8LYT7_SALAI Tax_Id=391037 SubName: Full=Tyrosine recombinase XerD;[Salinispora arenicola] Length = 345 Score = 306 bits (783), Expect = 3e-81 Identities = 174/317 (54%), Positives = 209/317 (65%), Gaps = 11/317 (3%) Query: 5 ALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVA 64 ALQ ++GYLD+L +ER +AANTL+SYRRDL RY L+ G+ +LA V V L Sbjct: 32 ALQHAVRGYLDHLAVERGLAANTLASYRRDLGRYLDTLASVGVTELASVDPGQVEVHLAR 91 Query: 65 LRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLT 124 LR GD G GLHRFA+ EGL +D +R +RP P RRLP++L Sbjct: 92 LRAGD--DGHPPLAASSAARAASAVRGLHRFALREGLAGVDPSRDLRPAAPPRRLPRALP 149 Query: 125 VDEVLALLESVGG-ESRADG-PXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVL 182 VD+VL LLE+ G + DG P Y TG+RISEAVG+ VDD+DT VL Sbjct: 150 VDDVLKLLEAAGSVAATGDGAPLALRDRALLEFLYGTGARISEAVGVAVDDLDTDTGAVL 209 Query: 183 LQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAW 242 L+GKGG+ RLVP+G AV AL YLVR R LA G G TPA+FLNARGG LSRQ AW Sbjct: 210 LRGKGGRNRLVPIGGYAVAALRGYLVRARPGLAAAGRG---TPAVFLNARGGPLSRQGAW 266 Query: 243 QVLQDAAEHAGI----TSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTL 298 +L+ AA AG+ VSPH LRHS+ATHLL+GGAD+RVVQEL+GHASVTTTQ+YT+ Sbjct: 267 AILRGAARRAGLPGVGAEAVSPHTLRHSYATHLLDGGADVRVVQELLGHASVTTTQVYTM 326 Query: 299 VTVQALREVWAGAHPRA 315 VTVQ LREV+A AHPRA Sbjct: 327 VTVQRLREVYATAHPRA 343 >tr|C4RHX9|C4RHX9_9ACTO Tax_Id=219305 SubName: Full=Tyrosine recombinase xerD;[Micromonospora sp. ATCC 39149] Length = 336 Score = 306 bits (783), Expect = 3e-81 Identities = 176/321 (54%), Positives = 214/321 (66%), Gaps = 14/321 (4%) Query: 5 ALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVA 64 AL+ ++GYLD+L +ER ++ANTL+SYRRDL RY L+D GI DLA V V L Sbjct: 20 ALRRAVRGYLDHLTVERGLSANTLASYRRDLERYLATLTDAGIGDLASVAAGVVEAHLAR 79 Query: 65 LRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLT 124 LR GD G GLHRFA+ EGL D +R VRPP P RRLP++L Sbjct: 80 LRAGD--DGHPPLAVSSAARAASAVRGLHRFALREGLAGADPSRDVRPPAPPRRLPRALA 137 Query: 125 VDEVLALLESVGGESRA-DG-PXXXXXXXXXXXXYSTGSRISEAVGLDVDDVD---TQAR 179 VD+V+ LLE+ G + A DG P Y TG+RISEAVG +DD+D T Sbjct: 138 VDQVVRLLETAGPVTAAGDGAPLALRDRALLEFLYGTGARISEAVGAAIDDLDGLDTGEA 197 Query: 180 TVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQ 239 TVLL+GKGG+ RLVPVG A +AL A+LVRGR L G G TPA+F+N RGG L+RQ Sbjct: 198 TVLLRGKGGRSRLVPVGGYAAEALRAWLVRGRPALVAAGRG---TPAVFVNVRGGTLTRQ 254 Query: 240 SAWQVLQDAAEHAGI----TSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQI 295 AW +L+ AAE AG+ + VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQ+ Sbjct: 255 GAWTILRRAAERAGLPVDGANAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQV 314 Query: 296 YTLVTVQALREVWAGAHPRAK 316 YTLVTV+ LREV+A AHPRA+ Sbjct: 315 YTLVTVERLREVYATAHPRAR 335 >tr|A3TKV3|A3TKV3_9MICO Tax_Id=313589 SubName: Full=Tyrosine recombinase;[Janibacter sp. HTCC2649] Length = 299 Score = 306 bits (783), Expect = 3e-81 Identities = 171/307 (55%), Positives = 206/307 (67%), Gaps = 8/307 (2%) Query: 10 LQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRGD 69 ++ +L +L +ER ++ANTL +YRRDL R++ +LS GI+D AKV E VSEFL LR GD Sbjct: 1 MRSWLTHLDVERGLSANTLKAYRRDLGRWTAYLSVVGIDDPAKVTERHVSEFLARLREGD 60 Query: 70 PDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEVL 129 D GLH+F EG VD D A AV PP P RLPK+++V EV Sbjct: 61 EDHPALAANSAARTLVSVR--GLHKFLALEGEVDADPAAAVSPPPPPSRLPKAISVSEVE 118 Query: 130 ALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQGKGGK 189 LL + + D P Y TG+RISEAVGLD+DDVD A V L+GKGGK Sbjct: 119 RLLNAA---AVGDTPASLRDKALLELLYGTGARISEAVGLDIDDVDMDAGIVRLEGKGGK 175 Query: 190 QRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDAA 249 QRLVP+G A AL AYLVRGR + +G G TPAIFLN RG RLSRQSAW +L+ AA Sbjct: 176 QRLVPLGSYARTALTAYLVRGRGTFSTKGKG---TPAIFLNQRGSRLSRQSAWSILRAAA 232 Query: 250 EHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVWA 309 A ++ +SPH LRHSFATHLLEGGAD+RVVQEL+GHASVTTTQ+YTLVTVQ LREV+A Sbjct: 233 ARADLSGHLSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTVQQLREVYA 292 Query: 310 GAHPRAK 316 +HPRA+ Sbjct: 293 QSHPRAR 299 >tr|Q47QN0|Q47QN0_THEFY Tax_Id=269800 SubName: Full=Tyrosine recombinase XerD;[Thermobifida fusca] Length = 321 Score = 303 bits (776), Expect = 2e-80 Identities = 178/322 (55%), Positives = 208/322 (64%), Gaps = 22/322 (6%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L T ++GYLD+L +ER +AANTL SYRRDL RY L+ RGI DL V DV+ FL L Sbjct: 8 LHTAVRGYLDHLTVERGLAANTLQSYRRDLNRYLDFLTARGITDLRDVRADDVASFLRTL 67 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R GD GLHRFA+ EGL D A VRPP RRLPK++TV Sbjct: 68 REGDAHH--RPLGANSAGRAVIAVRGLHRFALREGLTAHDPAHEVRPPALQRRLPKAITV 125 Query: 126 DEVLALLES--VGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDV--------- 174 +V ALL + +GG GP Y TG+RISE VGLDVDDV Sbjct: 126 AQVEALLAAADIGG-----GPRALRDRALIELLYGTGARISEVVGLDVDDVTRLRPDPHA 180 Query: 175 DTQARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGG 234 DT+ V +GKGGK+R+VPVGR A A+DAYLVR R LA G G + A+FLNARGG Sbjct: 181 DTEVAAVRFRGKGGKERIVPVGRYARTAVDAYLVRARPGLAAAGRG---SSALFLNARGG 237 Query: 235 RLSRQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQ 294 RL+RQ AW VL AAE AG+ VSPH LRHSFATHL++GGAD+RVVQEL+GHASVTTTQ Sbjct: 238 RLTRQGAWAVLHAAAERAGLRD-VSPHTLRHSFATHLIDGGADVRVVQELLGHASVTTTQ 296 Query: 295 IYTLVTVQALREVWAGAHPRAK 316 +YTLVTV LREV+A AHPRA+ Sbjct: 297 VYTLVTVDRLREVYAAAHPRAR 318 >tr|C1RJR5|C1RJR5_9CELL Tax_Id=446466 SubName: Full=Tyrosine recombinase XerD;[Cellulomonas flavigena DSM 20109] Length = 310 Score = 298 bits (762), Expect = 7e-79 Identities = 168/314 (53%), Positives = 204/314 (64%), Gaps = 11/314 (3%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L L+GYL +L +ER +AA+TL++YRRDL RY HL RG + A++ E D ++++ L Sbjct: 5 LTAALEGYLAHLAVERGLAAHTLAAYRRDLTRYVAHLHARGRTEPAEITERDAEDYVLVL 64 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R G V G HRF +GL D A +RPP RRLPK++ V Sbjct: 65 RTGSDGRAVLSPASAARSVVALR--GWHRFLALDGLAPTDAAAELRPPAQPRRLPKAIGV 122 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDT--QARTVLL 183 D+V LL++ G DGP YSTG+RISEAVGLDVDD+D V L Sbjct: 123 DDVARLLDAAG---LGDGPVPLRDRALLELVYSTGARISEAVGLDVDDLDLTPDRGAVRL 179 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQ 243 GKGGK+R+VPVG A QA+DAYLVRGR LA G G TPAIFLN RG RLSRQSAW Sbjct: 180 LGKGGKERVVPVGSYAAQAVDAYLVRGRPALAAAGRG---TPAIFLNTRGARLSRQSAWA 236 Query: 244 VLQDAAEHAGITSG-VSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQ 302 VL+ AAE AG+ + +SPH LRHSFATHLL GGAD+RVVQEL+GHASV TTQIYTLVT Sbjct: 237 VLRTAAERAGLAADHLSPHTLRHSFATHLLAGGADVRVVQELLGHASVATTQIYTLVTPD 296 Query: 303 ALREVWAGAHPRAK 316 +REV+A +HPRA+ Sbjct: 297 TMREVYAASHPRAR 310 >tr|C8XHP9|C8XHP9_NAKMY Tax_Id=479431 SubName: Full=Tyrosine recombinase XerD;[Nakamurella multipartita] Length = 353 Score = 297 bits (760), Expect = 1e-78 Identities = 177/337 (52%), Positives = 208/337 (61%), Gaps = 29/337 (8%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L L+GYLD+L++ER +A NT+ SYRRDL RY + L+ G +A V DVS+FLV L Sbjct: 20 LVAALRGYLDHLVVERGVARNTVLSYRRDLNRYLQFLAAAGRTRVADVTAADVSDFLVCL 79 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 R G G G HRF + EG + D +R V PPTP RRLPK+L V Sbjct: 80 RTGA--DGRPPLAASSAARAVVAARGWHRFLLNEGTAEADPSRDVHPPTPARRLPKALPV 137 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQ-------- 177 + + LL++ G DGP Y+TG+RISE VGLDVDD+D Sbjct: 138 EAIGRLLDAAGSAD-PDGPRGLRDRALLELLYATGARISEVVGLDVDDIDLGPGRLAGRS 196 Query: 178 ----------------ARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGM 221 V L GKG K+RLVPVG A++AL+AYLVRGR LA G G Sbjct: 197 STDPTDPTDPQVAPPITSVVRLHGKGAKERLVPVGSFALRALEAYLVRGRPVLAAAGRGA 256 Query: 222 -LATPAIFLNARGGRLSRQSAWQVLQDAAEHAGI-TSGVSPHMLRHSFATHLLEGGADIR 279 A A+FLN RGGRLSRQSAWQVL DAA AG+ SGVSPH LRHSFATHLLEGGAD+R Sbjct: 257 GPARGALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHSFATHLLEGGADVR 316 Query: 280 VVQELMGHASVTTTQIYTLVTVQALREVWAGAHPRAK 316 VQEL+GHASVTTTQIYTLVTV ALREV+ AHPRA+ Sbjct: 317 SVQELLGHASVTTTQIYTLVTVDALREVYVTAHPRAR 353 >tr|A1R5A8|A1R5A8_ARTAT Tax_Id=290340 (xerD)SubName: Full=Tyrosine recombinase XerD;[Arthrobacter aurescens] Length = 319 Score = 294 bits (752), Expect = 1e-77 Identities = 165/319 (51%), Positives = 202/319 (63%), Gaps = 14/319 (4%) Query: 2 TTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEF 61 T + + YL ++ +ER +AANTLS+YRRDL RYS L+ +G+E + H V+ F Sbjct: 8 TANGVDRAITDYLQHVGVERGLAANTLSAYRRDLARYSNFLAAQGVEQPGSITRHHVTAF 67 Query: 62 LVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPK 121 + AL D G GLH+F EG D A V PP PG+RLPK Sbjct: 68 VQAL--SDGSDGAAALGVRSAARTVVAVRGLHKFWALEGTTTADPASDVHPPMPGKRLPK 125 Query: 122 SLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQ---- 177 +++V EV +LE+ G +D YSTG+RISEAVGLDVDDV + Sbjct: 126 AISVGEVTRILEAAG----SDTATGLRDRALLEFLYSTGARISEAVGLDVDDVSLEDTGG 181 Query: 178 -ARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRL 236 V L GKG K+RLVP+G +A+ AY+VRGR LA +G G TPA+FLNARGGR+ Sbjct: 182 DPAIVRLFGKGSKERLVPLGSFGARAVGAYVVRGRPLLASKGKG---TPALFLNARGGRI 238 Query: 237 SRQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIY 296 SRQSAW +L+ AAE A IT VSPH LRHSFATHLLEGGAD+RVVQEL+GHASVTTTQ+Y Sbjct: 239 SRQSAWTILKTAAEKANITKDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVY 298 Query: 297 TLVTVQALREVWAGAHPRA 315 TLVT LREV+A AHPRA Sbjct: 299 TLVTADTLREVYAAAHPRA 317 >tr|A0JV45|A0JV45_ARTS2 Tax_Id=290399 SubName: Full=Tyrosine recombinase XerD;[Arthrobacter sp.] Length = 346 Score = 293 bits (751), Expect = 1e-77 Identities = 166/316 (52%), Positives = 202/316 (63%), Gaps = 14/316 (4%) Query: 5 ALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVA 64 A+ + YL ++ +ER +AANTLS+YRRDL RY+ +L+ G V V+ F+ A Sbjct: 38 AIDRAVNDYLQHMGVERGLAANTLSAYRRDLARYANYLAACGPSRPGDVTRRHVTGFVQA 97 Query: 65 LRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLT 124 L D G GLH+F EG+ D A V PP PG+RLPK+++ Sbjct: 98 L--SDGSDGGTALGVRSAARTVVAVRGLHKFWALEGITTADPASDVHPPMPGKRLPKAIS 155 Query: 125 VDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQA-----R 179 VDEV +LE+ G D YSTG+RISEAVGLDVDD+ QA Sbjct: 156 VDEVTRILEAAG----TDTATGLRDRALLEFLYSTGARISEAVGLDVDDISLQADQAGPA 211 Query: 180 TVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQ 239 V L GKG K+RLVP+G +ALDAYLVRGR LA +G G TPA+FLNARGGR+SRQ Sbjct: 212 IVRLFGKGSKERLVPLGSYGARALDAYLVRGRPLLAAKGKG---TPALFLNARGGRISRQ 268 Query: 240 SAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLV 299 SAW +L+ AA+ A IT VSPH LRHSFATHLLEGGAD+RVVQEL+GHASVTTTQ+YTLV Sbjct: 269 SAWTILKAAADKANITKDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLV 328 Query: 300 TVQALREVWAGAHPRA 315 T LRE++A AHPRA Sbjct: 329 TADTLREIYAAAHPRA 344 >tr|A0LUA3|A0LUA3_ACIC1 Tax_Id=351607 SubName: Full=Tyrosine recombinase XerD;[Acidothermus cellulolyticus] Length = 311 Score = 293 bits (749), Expect = 2e-77 Identities = 165/306 (53%), Positives = 197/306 (64%), Gaps = 6/306 (1%) Query: 10 LQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVALRRGD 69 ++ YL ++ +E+ +A NT++ YRRDL RY + L RG D V E ++ FL ALR GD Sbjct: 10 VEAYLAHVAVEKGLAKNTVAGYRRDLRRYQEFLEQRGTTDPRAVTEEHITAFLAALRTGD 69 Query: 70 PDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTVDEVL 129 D GLHRFA +G+ D +R VRPPTPGRRLPK++TV EV Sbjct: 70 ADH--PPLAVSSSARAVVAVRGLHRFAAMDGITADDPSRDVRPPTPGRRLPKAITVAEVE 127 Query: 130 ALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQGKGGK 189 LL +V G + P Y TG+RISEAVGL +DD+D A V L+GKG K Sbjct: 128 RLLAAVDGHA----PRELRDRALLEVLYGTGARISEAVGLAIDDLDLDAGLVRLRGKGSK 183 Query: 190 QRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQVLQDAA 249 QR+VP+G A AL YL GR L A A+FLNARGGRLSRQSAW VL+ AA Sbjct: 184 QRVVPLGGYARSALREYLTAGRPALLAAARSGSARGAVFLNARGGRLSRQSAWTVLRRAA 243 Query: 250 EHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQALREVWA 309 AG+ + +SPH LRHSFATHLLEGGADIRVVQEL+GHASVTTTQIYTLVTV LREV+A Sbjct: 244 LRAGLATVISPHTLRHSFATHLLEGGADIRVVQELLGHASVTTTQIYTLVTVDTLREVYA 303 Query: 310 GAHPRA 315 AHPRA Sbjct: 304 MAHPRA 309 >tr|B8HGE6|B8HGE6_ARTCA Tax_Id=452863 SubName: Full=Tyrosine recombinase XerD;[Arthrobacter chlorophenolicus] Length = 362 Score = 291 bits (744), Expect = 9e-77 Identities = 168/326 (51%), Positives = 208/326 (63%), Gaps = 20/326 (6%) Query: 1 VTTAALQTQLQ----GYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEH 56 V AA T++ YL ++ +ER +AANTL++YRRDL RYS++L+ G + + H Sbjct: 44 VQAAAAPTKIDRGVTDYLQHMGVERGLAANTLAAYRRDLARYSRYLAGTGCQQPGDITRH 103 Query: 57 DVSEFLVALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPG 116 V+ F+ AL D G GLH+F EG D A V PP G Sbjct: 104 HVTGFVRAL--SDGSDGGTALGVRSAARTVVAVRGLHKFWALEGHTASDPASEVHPPMAG 161 Query: 117 RRLPKSLTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDV-- 174 +RLPK++TVDEV +LE+ G D YSTG+RISEAVGLDVDD+ Sbjct: 162 KRLPKAITVDEVTRILEAAG----TDTATGLRDRALLEFLYSTGARISEAVGLDVDDISL 217 Query: 175 ---DTQARTVLLQ--GKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFL 229 DT+ +++ GKG K+RLVP+G +AL+AYLVRGR LA +G G TPA+FL Sbjct: 218 AGDDTEQGPAIVRLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKGKG---TPALFL 274 Query: 230 NARGGRLSRQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHAS 289 NARGGR+SRQSAW +L+ AAE A IT VSPH LRHSFATHLLEGGAD+RVVQEL+GHAS Sbjct: 275 NARGGRISRQSAWTILKVAAEKANITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHAS 334 Query: 290 VTTTQIYTLVTVQALREVWAGAHPRA 315 VTTTQ+YTLVT LREV+A AHPRA Sbjct: 335 VTTTQVYTLVTADTLREVYAAAHPRA 360 >tr|C2BPU6|C2BPU6_9CORY Tax_Id=525264 (xerD)SubName: Full=Site-specific tyrosine recombinase XerD;[Corynebacterium pseudogenitalium ATCC 33035] Length = 296 Score = 288 bits (737), Expect = 6e-76 Identities = 161/312 (51%), Positives = 204/312 (65%), Gaps = 17/312 (5%) Query: 4 AALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLV 63 +AL+ Q +L++L +ER ++ANTLS+YRRD+ RY L D G+EDL V V +L Sbjct: 2 SALENIAQTWLNHLAVERGVSANTLSNYRRDVRRYLSWLGDNGVEDLRSVTRPMVEAYLK 61 Query: 64 ALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSL 123 LR S GLH+FAV+EG+VD+DVA V PP+ G++LP++L Sbjct: 62 DLRSHMAVSSANRALIVAR--------GLHKFAVSEGVVDVDVAVEVTPPSTGQQLPETL 113 Query: 124 TVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLL 183 +VDEV AL+E+ E+ P Y TG+RISE V L+VDDV + + L Sbjct: 114 SVDEVTALIEATPTET----PVDVRDRALLEMLYGTGARISEIVSLNVDDVSSAQEVIRL 169 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQ 243 +GKG K+R+VPVG A QALDAYLVR R L++ TPA+FLN RGG LSRQSAW Sbjct: 170 RGKGDKERIVPVGSHARQALDAYLVRARPALSKG-----KTPALFLNTRGGALSRQSAWT 224 Query: 244 VLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQA 303 VL+ AA+ A + +SPH LRHSFATHLLEGGAD+R VQEL+GH+SVTTTQIYT VT + Sbjct: 225 VLKTAAQRAQLGKSISPHTLRHSFATHLLEGGADVRTVQELLGHSSVTTTQIYTHVTADS 284 Query: 304 LREVWAGAHPRA 315 LREVW AHPRA Sbjct: 285 LREVWRTAHPRA 296 >tr|C6RBP6|C6RBP6_9CORY Tax_Id=553206 (xerD)SubName: Full=Tyrosine recombinase XerD;[Corynebacterium tuberculostearicum SK141] Length = 296 Score = 287 bits (735), Expect = 1e-75 Identities = 161/312 (51%), Positives = 203/312 (65%), Gaps = 17/312 (5%) Query: 4 AALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLV 63 +AL+ Q +L++L +ER ++ANTLS+YRRD+ RY L D G+EDL V V +L Sbjct: 2 SALENIAQTWLNHLAVERGVSANTLSNYRRDVRRYLAWLGDNGVEDLRSVTRPMVEAYLK 61 Query: 64 ALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSL 123 LR S GLH+FAV+EG+VD+DVA V PP+ G+ LP++L Sbjct: 62 DLRSHMAVSSANRALIVAR--------GLHKFAVSEGVVDVDVAVEVTPPSTGQHLPETL 113 Query: 124 TVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLL 183 +VDEV AL+E+ E+ P Y TG+RISE V L+VDDV + + L Sbjct: 114 SVDEVTALIEATPTET----PVDVRDRALLEMLYGTGARISEIVSLNVDDVSSAQEVIRL 169 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQ 243 +GKG K+R+VPVG A QALDAYLVR R L++ TPA+FLN RGG LSRQSAW Sbjct: 170 RGKGDKERIVPVGSHARQALDAYLVRARPALSKG-----KTPALFLNTRGGALSRQSAWT 224 Query: 244 VLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQA 303 VL+ AA+ A + +SPH LRHSFATHLLEGGAD+R VQEL+GH+SVTTTQIYT VT + Sbjct: 225 VLKTAAQRAQLGKSISPHTLRHSFATHLLEGGADVRTVQELLGHSSVTTTQIYTHVTADS 284 Query: 304 LREVWAGAHPRA 315 LREVW AHPRA Sbjct: 285 LREVWRTAHPRA 296 >tr|C0W3E4|C0W3E4_9ACTO Tax_Id=525246 SubName: Full=Tyrosine recombinase;[Actinomyces urogenitalis DSM 15434] Length = 316 Score = 287 bits (734), Expect = 1e-75 Identities = 163/314 (51%), Positives = 209/314 (66%), Gaps = 10/314 (3%) Query: 5 ALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVA 64 AL+ +GYL +L +ER ++ NTL++Y RDL RY + L RG++DLA V E DV+ FL A Sbjct: 10 ALERARRGYLAHLRVERGLSPNTLAAYERDLTRYCRFLLARGVQDLAAVTEADVAAFLEA 69 Query: 65 LRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLT 124 +R GD G G H+F + EG D+D + AV PP GRRLPK+L+ Sbjct: 70 IRTGD--DGGRALAASSASRTVTAVRGWHKFLLDEGNTDVDPSAAVHPPQVGRRLPKALS 127 Query: 125 VDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQ 184 V+EV ALLE+ S D P Y+TG+RISEAVGL +DD+D ++ + L Sbjct: 128 VEEVQALLEAA---STDDSPRSLRDRALLELLYATGARISEAVGLVIDDLDRESGCIRLF 184 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQV 244 GKG K+R+VPVG+ A ALDAYLV+ R LA +G G+ P +FLN G LSRQSAW V Sbjct: 185 GKGRKERIVPVGQYAWDALDAYLVQARPVLAAKGRGV---PEVFLNTLGRPLSRQSAWGV 241 Query: 245 LQDAAEHAGITSG--VSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQ 302 L+ A+ AG+ + VSPH LRHSFATHLL GGAD+RVVQE++GHASVTTTQIYT VTV+ Sbjct: 242 LRQASARAGLGADKHVSPHTLRHSFATHLLAGGADVRVVQEMLGHASVTTTQIYTKVTVE 301 Query: 303 ALREVWAGAHPRAK 316 LREV+A +HPRA+ Sbjct: 302 HLREVYATSHPRAR 315 >tr|C5CAL4|C5CAL4_MICLC Tax_Id=465515 SubName: Full=Tyrosine recombinase XerD;[Micrococcus luteus] Length = 321 Score = 283 bits (724), Expect = 2e-74 Identities = 164/322 (50%), Positives = 203/322 (63%), Gaps = 16/322 (4%) Query: 3 TAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFL 62 T+AL + +LD+L +ER +A NTL++YRRDL RY + L G+ V V+ F+ Sbjct: 8 TSALAAPFRRHLDHLAVERGLAENTLAAYRRDLARYRRWLEAAGVRAPGDVDPGHVAGFV 67 Query: 63 VALRRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKS 122 AL GD G GLHRF EGL + D AR V PP PG RLP++ Sbjct: 68 QALATGD--DGGRPLAVRSAARVLAAVRGLHRFWALEGLAETDPARDVHPPKPGTRLPRA 125 Query: 123 LTVDEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQART-- 180 L V++V ALL++V D P Y TG+RISE VGLDVDDV A+T Sbjct: 126 LPVEQVSALLDAVP----TDTPAGLRDRALLEFLYGTGARISEVVGLDVDDVVGLAQTGD 181 Query: 181 ------VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGG 234 V L GKG K+R+VP+G A ALDA+LVRGR + +TPA+F+NA GG Sbjct: 182 DGGQPVVRLFGKGSKERVVPIGSYAAAALDAWLVRGRPTIM--AGAARSTPALFVNACGG 239 Query: 235 RLSRQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQ 294 RLSRQSAW VL+ AAE AG+ + VSPH LRH FATHLL GGAD+RVVQEL+GHASVTTTQ Sbjct: 240 RLSRQSAWAVLKRAAERAGLEADVSPHTLRHCFATHLLAGGADVRVVQELLGHASVTTTQ 299 Query: 295 IYTLVTVQALREVWAGAHPRAK 316 +YTLVTV +LREV++ AHPRA+ Sbjct: 300 VYTLVTVDSLREVYSAAHPRAR 321 >tr|C7PVX8|C7PVX8_CATAD Tax_Id=479433 SubName: Full=Tyrosine recombinase XerD;[Catenulispora acidiphila] Length = 306 Score = 281 bits (719), Expect = 7e-74 Identities = 161/313 (51%), Positives = 202/313 (64%), Gaps = 20/313 (6%) Query: 6 LQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLVAL 65 L ++++ +L++L +ER ++ANTL++YRRDL RY L R + + + DVS FL +L Sbjct: 8 LDSRVKAHLEHLSVERGLSANTLAAYRRDLSRYRVFLDTRDRANFSDIDRADVSAFLASL 67 Query: 66 RRGDPDSGVXXXXXXXXXXXXXXXXGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSLTV 125 + G S GLHRFAVAEG V +DV+ V PP RLPK+L + Sbjct: 68 QDGAASSAARTMSAVR---------GLHRFAVAEGWVGVDVSDDVAPPQVPMRLPKALPL 118 Query: 126 DEVLALLESVGGESRADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDVDTQARTVLLQG 185 D++ LL + + D P YSTG+R+SEAV LDVDD+D + RTV+L G Sbjct: 119 DDIERLLAA----TEIDEPMALRDRALLEFLYSTGARVSEAVALDVDDIDREDRTVVLDG 174 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRSDL---ARRGPGMLATPAIFLNARGGRLSRQSAW 242 KGGKQRLVPVG A +A+D YLVR R +L AR G G A+FLNARGGRL+RQ AW Sbjct: 175 KGGKQRLVPVGSYACRAVDDYLVRLRPELTRKARSGNG----GALFLNARGGRLTRQGAW 230 Query: 243 QVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQ 302 VL AE G+ VSPH LRHSFATHLL+GGADIR VQEL+GH+S TTTQIYT VTV Sbjct: 231 TVLGAVAERVGLAGRVSPHTLRHSFATHLLDGGADIRTVQELLGHSSATTTQIYTRVTVD 290 Query: 303 ALREVWAGAHPRA 315 LREV+A +HPRA Sbjct: 291 RLREVYATSHPRA 303 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.318 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 2,034,517,841 Number of extensions: 75575580 Number of successful extensions: 214132 Number of sequences better than 10.0: 10083 Number of HSP's gapped: 205113 Number of HSP's successfully gapped: 10257 Length of query: 316 Length of database: 3,808,957,724 Length adjustment: 137 Effective length of query: 179 Effective length of database: 2,280,953,706 Effective search space: 408290713374 Effective search space used: 408290713374 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 80 (35.4 bits)