BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML1370 (257 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B8ZRI1|B8ZRI1_MYCLB Tax_Id=561304 RecName: Full=Pseudouridine... 451 e-125 sp|O05668|Y1370_MYCLE Tax_Id=1769 RecName: Full=Uncharacterized ... 450 e-125 sp|P65843|Y1738_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 364 4e-99 sp|P65842|Y1711_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 364 4e-99 tr|C6DRW1|C6DRW1_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine... 364 4e-99 tr|C1ANY4|C1ANY4_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine... 364 4e-99 tr|B2HRU7|B2HRU7_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine... 364 4e-99 tr|A5U370|A5U370_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine... 364 4e-99 tr|A1KJC8|A1KJC8_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine... 364 4e-99 tr|A0PSX4|A0PSX4_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine... 364 4e-99 tr|A5WN30|A5WN30_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine... 364 4e-99 tr|A4KHM4|A4KHM4_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine... 363 8e-99 tr|A2VIJ5|A2VIJ5_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine... 363 8e-99 tr|A0QH61|A0QH61_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine... 358 4e-97 tr|Q740D8|Q740D8_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine s... 356 2e-96 tr|A0QYQ1|A0QYQ1_MYCS2 Tax_Id=246196 (rluB)RecName: Full=Pseudou... 353 8e-96 tr|Q1B7U8|Q1B7U8_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine... 348 3e-94 tr|A3Q0P6|A3Q0P6_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine... 348 3e-94 tr|A1UH59|A1UH59_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine... 348 3e-94 tr|A4T9Z6|A4T9Z6_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine... 339 2e-91 tr|A1TA74|A1TA74_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine... 339 2e-91 tr|C1ASX4|C1ASX4_RHOOB Tax_Id=632772 RecName: Full=Pseudouridine... 301 6e-80 tr|Q0SI80|Q0SI80_RHOSR Tax_Id=101510 RecName: Full=Pseudouridine... 300 1e-79 tr|C2AQV1|C2AQV1_TSUPA Tax_Id=521096 RecName: Full=Pseudouridine... 296 2e-78 tr|B1MB30|B1MB30_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine... 295 3e-78 tr|D0L940|D0L940_9ACTO Tax_Id=526226 SubName: Full=Pseudouridine... 294 6e-78 tr|C1A029|C1A029_RHOE4 Tax_Id=234621 RecName: Full=Pseudouridine... 285 4e-75 tr|C3JWQ3|C3JWQ3_RHOER Tax_Id=596309 RecName: Full=Pseudouridine... 285 4e-75 tr|C6WA55|C6WA55_ACTMD Tax_Id=446462 RecName: Full=Pseudouridine... 280 1e-73 tr|Q5YY84|Q5YY84_NOCFA Tax_Id=37329 RecName: Full=Pseudouridine ... 273 1e-71 tr|B1VH07|B1VH07_CORU7 Tax_Id=504474 RecName: Full=Pseudouridine... 270 1e-70 tr|Q6NHE3|Q6NHE3_CORDI Tax_Id=1717 RecName: Full=Pseudouridine s... 267 7e-70 tr|Q8FTK7|Q8FTK7_COREF Tax_Id=152794 RecName: Full=Pseudouridine... 267 1e-69 tr|C7MZG0|C7MZG0_SACVD Tax_Id=471857 RecName: Full=Pseudouridine... 267 1e-69 tr|C8NNL7|C8NNL7_COREF Tax_Id=196164 SubName: Full=RNA pseudouri... 267 1e-69 tr|Q4JVW6|Q4JVW6_CORJK Tax_Id=306537 RecName: Full=Pseudouridine... 266 1e-69 tr|C8RSZ6|C8RSZ6_CORJE Tax_Id=525262 (rluB)SubName: Full=RNA pse... 266 1e-69 tr|C3PGG1|C3PGG1_CORA7 Tax_Id=548476 RecName: Full=Pseudouridine... 261 4e-68 tr|C5VBT2|C5VBT2_9CORY Tax_Id=553207 (rluB)RecName: Full=Pseudou... 261 7e-68 tr|A4FKA2|A4FKA2_SACEN Tax_Id=405948 RecName: Full=Pseudouridine... 260 9e-68 tr|Q8NQK8|Q8NQK8_CORGL Tax_Id=1718 RecName: Full=Pseudouridine s... 259 2e-67 tr|A4QE19|A4QE19_CORGB Tax_Id=340322 RecName: Full=Pseudouridine... 259 2e-67 tr|Q6M5E9|Q6M5E9_CORGL Tax_Id=1718 RecName: Full=Pseudouridine s... 259 2e-67 tr|C0E3H3|C0E3H3_9CORY Tax_Id=566549 RecName: Full=Pseudouridine... 259 2e-67 tr|C5C6J9|C5C6J9_BEUC1 Tax_Id=471853 RecName: Full=Pseudouridine... 259 3e-67 tr|B8HGG0|B8HGG0_ARTCA Tax_Id=452863 RecName: Full=Pseudouridine... 256 1e-66 tr|C6RBQ2|C6RBQ2_9CORY Tax_Id=553206 RecName: Full=Pseudouridine... 255 3e-66 tr|C2BPU0|C2BPU0_9CORY Tax_Id=525264 RecName: Full=Pseudouridine... 255 3e-66 tr|C8XHP1|C8XHP1_NAKMY Tax_Id=479431 SubName: Full=Pseudouridine... 254 5e-66 tr|C2CMC7|C2CMC7_CORST Tax_Id=525268 RecName: Full=Pseudouridine... 254 8e-66 >tr|B8ZRI1|B8ZRI1_MYCLB Tax_Id=561304 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium leprae] Length = 257 Score = 451 bits (1160), Expect = e-125 Identities = 234/257 (91%), Positives = 235/257 (91%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTR Sbjct: 1 MMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRVDPD 60 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR Sbjct: 61 VSVVRVDGVKVVVDDSLVYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH Sbjct: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL Sbjct: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 Query: 241 RALLRDEIRQLYKEVGL 257 RALLRDEIRQLYKEVGL Sbjct: 241 RALLRDEIRQLYKEVGL 257 >sp|O05668|Y1370_MYCLE Tax_Id=1769 RecName: Full=Uncharacterized RNA pseudouridine synthase ML1370; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium leprae] Length = 256 Score = 450 bits (1158), Expect = e-125 Identities = 234/256 (91%), Positives = 234/256 (91%) Query: 2 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXX 61 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTR Sbjct: 1 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRVDPDV 60 Query: 62 XXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 121 YLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL Sbjct: 61 SVVRVDGVKVVVDDSLVYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 120 Query: 122 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 181 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV Sbjct: 121 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 180 Query: 182 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 241 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR Sbjct: 181 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 240 Query: 242 ALLRDEIRQLYKEVGL 257 ALLRDEIRQLYKEVGL Sbjct: 241 ALLRDEIRQLYKEVGL 256 >sp|P65843|Y1738_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized RNA pseudouridine synthase Mb1738; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium bovis] Length = 254 Score = 364 bits (935), Expect = 4e-99 Identities = 189/257 (73%), Positives = 209/257 (81%), Gaps = 3/257 (1%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MMAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQ 57 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGR Sbjct: 58 VAVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGR 117 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA Sbjct: 118 LDADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAF 177 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG + Sbjct: 178 VDDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSV 237 Query: 241 RALLRDEIRQLYKEVGL 257 RAL +EI QLY+ VGL Sbjct: 238 RALRSNEIGQLYQAVGL 254 >sp|P65842|Y1711_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized RNA pseudouridine synthase Rv1711/MT1751.1; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium tuberculosis] Length = 254 Score = 364 bits (935), Expect = 4e-99 Identities = 189/257 (73%), Positives = 209/257 (81%), Gaps = 3/257 (1%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MMAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQ 57 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGR Sbjct: 58 VAVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGR 117 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA Sbjct: 118 LDADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAF 177 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG + Sbjct: 178 VDDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSV 237 Query: 241 RALLRDEIRQLYKEVGL 257 RAL +EI QLY+ VGL Sbjct: 238 RALRSNEIGQLYQAVGL 254 >tr|C6DRW1|C6DRW1_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 254 Score = 364 bits (935), Expect = 4e-99 Identities = 189/257 (73%), Positives = 209/257 (81%), Gaps = 3/257 (1%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MMAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQ 57 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGR Sbjct: 58 VAVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGR 117 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA Sbjct: 118 LDADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAF 177 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG + Sbjct: 178 VDDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSV 237 Query: 241 RALLRDEIRQLYKEVGL 257 RAL +EI QLY+ VGL Sbjct: 238 RALRSNEIGQLYQAVGL 254 >tr|C1ANY4|C1ANY4_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium bovis] Length = 254 Score = 364 bits (935), Expect = 4e-99 Identities = 189/257 (73%), Positives = 209/257 (81%), Gaps = 3/257 (1%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MMAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQ 57 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGR Sbjct: 58 VAVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGR 117 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA Sbjct: 118 LDADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAF 177 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG + Sbjct: 178 VDDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSV 237 Query: 241 RALLRDEIRQLYKEVGL 257 RAL +EI QLY+ VGL Sbjct: 238 RALRSNEIGQLYQAVGL 254 >tr|B2HRU7|B2HRU7_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium marinum] Length = 253 Score = 364 bits (935), Expect = 4e-99 Identities = 188/256 (73%), Positives = 205/256 (80%), Gaps = 3/256 (1%) Query: 2 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXX 61 M + D +RG +RLQK+LS+AGIASRRAAEKLII+GRVEVDGQ+V ELGTR Sbjct: 1 MTDTEDFEQERG---IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDT 57 Query: 62 XXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 121 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRGNK LFHVGRL Sbjct: 58 SLIRVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRL 117 Query: 122 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 181 DADTEGLILLTNDGELAHRLMHPSHEV KTYLATV G VPRGLGKKL G+EL+DGP V Sbjct: 118 DADTEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRV 177 Query: 182 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 241 D FAVVDAIPGKTLVR+TLHEGR RIVRR+L A GFPV+ LVR DIG VSLG+QRPG +R Sbjct: 178 DGFAVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVR 237 Query: 242 ALLRDEIRQLYKEVGL 257 AL RDEI QLYK VGL Sbjct: 238 ALRRDEIGQLYKAVGL 253 >tr|A5U370|A5U370_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 254 Score = 364 bits (935), Expect = 4e-99 Identities = 189/257 (73%), Positives = 209/257 (81%), Gaps = 3/257 (1%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MMAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQ 57 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGR Sbjct: 58 VAVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGR 117 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA Sbjct: 118 LDADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAF 177 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG + Sbjct: 178 VDDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSV 237 Query: 241 RALLRDEIRQLYKEVGL 257 RAL +EI QLY+ VGL Sbjct: 238 RALRSNEIGQLYQAVGL 254 >tr|A1KJC8|A1KJC8_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium bovis] Length = 254 Score = 364 bits (935), Expect = 4e-99 Identities = 189/257 (73%), Positives = 209/257 (81%), Gaps = 3/257 (1%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MMAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQ 57 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGR Sbjct: 58 VAVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGR 117 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA Sbjct: 118 LDADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAF 177 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG + Sbjct: 178 VDDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSV 237 Query: 241 RALLRDEIRQLYKEVGL 257 RAL +EI QLY+ VGL Sbjct: 238 RALRSNEIGQLYQAVGL 254 >tr|A0PSX4|A0PSX4_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium ulcerans] Length = 253 Score = 364 bits (935), Expect = 4e-99 Identities = 188/256 (73%), Positives = 205/256 (80%), Gaps = 3/256 (1%) Query: 2 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXX 61 M + D +RG +RLQK+LS+AGIASRRAAEKLII+GRVEVDGQ+V ELGTR Sbjct: 1 MTDTEDFEQERG---IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDT 57 Query: 62 XXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 121 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRGNK LFHVGRL Sbjct: 58 SLIRVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRL 117 Query: 122 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 181 DADTEGLILLTNDGELAHRLMHPSHEV KTYLATV G VPRGLGKKL G+EL+DGP V Sbjct: 118 DADTEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRV 177 Query: 182 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 241 D FAVVDAIPGKTLVR+TLHEGR RIVRR+L A GFPV+ LVR DIG VSLG+QRPG +R Sbjct: 178 DGFAVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVR 237 Query: 242 ALLRDEIRQLYKEVGL 257 AL RDEI QLYK VGL Sbjct: 238 ALRRDEIGQLYKAVGL 253 >tr|A5WN30|A5WN30_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 254 Score = 364 bits (935), Expect = 4e-99 Identities = 189/257 (73%), Positives = 209/257 (81%), Gaps = 3/257 (1%) Query: 1 LMVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXX 60 +M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MMAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQ 57 Query: 61 XXXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGR 120 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGR Sbjct: 58 VAVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGR 117 Query: 121 LDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAH 180 LDADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA Sbjct: 118 LDADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAF 177 Query: 181 VDDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCL 240 VDDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG + Sbjct: 178 VDDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSV 237 Query: 241 RALLRDEIRQLYKEVGL 257 RAL +EI QLY+ VGL Sbjct: 238 RALRSNEIGQLYQAVGL 254 >tr|A4KHM4|A4KHM4_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis str. Haarlem] Length = 253 Score = 363 bits (933), Expect = 8e-99 Identities = 189/256 (73%), Positives = 208/256 (81%), Gaps = 3/256 (1%) Query: 2 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXX 61 M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQV 57 Query: 62 XXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 121 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGRL Sbjct: 58 AVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRL 117 Query: 122 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 181 DADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA V Sbjct: 118 DADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFV 177 Query: 182 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 241 DDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG +R Sbjct: 178 DDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVR 237 Query: 242 ALLRDEIRQLYKEVGL 257 AL +EI QLY+ VGL Sbjct: 238 ALRSNEIGQLYQAVGL 253 >tr|A2VIJ5|A2VIJ5_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis C] Length = 253 Score = 363 bits (933), Expect = 8e-99 Identities = 189/256 (73%), Positives = 208/256 (81%), Gaps = 3/256 (1%) Query: 2 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXX 61 M E +SR RG +RLQK+LS+AGIASRRAAEK+I++GRVEVDG +V ELGTR Sbjct: 1 MAEPEESREPRG---IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQV 57 Query: 62 XXXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 121 YLALNKPRGM+STMSDDRGRPC+GDLIER+VRG KKLFHVGRL Sbjct: 58 AVVRVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRL 117 Query: 122 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 181 DADTEGL+LLTNDGELAHRLMHPSHEV KTYLATV G+VPRGLG+ L G+ELDDGPA V Sbjct: 118 DADTEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFV 177 Query: 182 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 241 DDFAVVDAIPGKTLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIGAVSLG QRPG +R Sbjct: 178 DDFAVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVR 237 Query: 242 ALLRDEIRQLYKEVGL 257 AL +EI QLY+ VGL Sbjct: 238 ALRSNEIGQLYQAVGL 253 >tr|A0QH61|A0QH61_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium avium] Length = 248 Score = 358 bits (918), Expect = 4e-97 Identities = 182/244 (74%), Positives = 202/244 (82%) Query: 14 AGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXX 73 A +RLQK+LS+AGIASRRAAEKLI++GRVEVDGQ+V ELGTR Sbjct: 5 AQGIRLQKVLSQAGIASRRAAEKLIVDGRVEVDGQVVTELGTRVDPDAAVIRVDGARVVL 64 Query: 74 XXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTN 133 YLALNKPRG++STMSDDRGRPC+GDLIERRVRGNK LFHVGRLDA+TEGLILLTN Sbjct: 65 DESQVYLALNKPRGVHSTMSDDRGRPCIGDLIERRVRGNKNLFHVGRLDAETEGLILLTN 124 Query: 134 DGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGK 193 DGELAHRLMHPSHEV KTYLATV G++PRGLGK L G+ELDDG A VD+FAVVDAIPGK Sbjct: 125 DGELAHRLMHPSHEVPKTYLATVTGSIPRGLGKTLRAGIELDDGMARVDEFAVVDAIPGK 184 Query: 194 TLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYK 253 TLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIG +SLG QRPG +RAL RDE+ +LY+ Sbjct: 185 TLVRVTLHEGRNRIVRRLLAAAGFPVESLVRTDIGPISLGKQRPGSIRALGRDEVGRLYQ 244 Query: 254 EVGL 257 VGL Sbjct: 245 AVGL 248 >tr|Q740D8|Q740D8_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium paratuberculosis] Length = 247 Score = 356 bits (913), Expect = 2e-96 Identities = 181/244 (74%), Positives = 201/244 (82%) Query: 14 AGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXX 73 A +RLQK+LS+AGIASRRAAEKLI++GRVEVDGQ+V ELGTR Sbjct: 4 AQGIRLQKVLSQAGIASRRAAEKLIVDGRVEVDGQVVTELGTRVDPDAAVIRVDGARVVL 63 Query: 74 XXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTN 133 YLALNKPRG++STMSDDRGRPC+GDLIERRVRGNK LFHVGRLDA+TEGLILLTN Sbjct: 64 DESQVYLALNKPRGVHSTMSDDRGRPCIGDLIERRVRGNKNLFHVGRLDAETEGLILLTN 123 Query: 134 DGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGK 193 DGELAHRLMHPSHEV KTYLATV G++PRGLGK L G+ELDDG A VD+FAVVD IPGK Sbjct: 124 DGELAHRLMHPSHEVPKTYLATVTGSIPRGLGKTLRAGIELDDGMARVDEFAVVDPIPGK 183 Query: 194 TLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYK 253 TLVR+TLHEGR RIVRRLL AAGFPVE LVRTDIG +SLG QRPG +RAL RDE+ +LY+ Sbjct: 184 TLVRVTLHEGRNRIVRRLLAAAGFPVESLVRTDIGPISLGKQRPGSIRALGRDEVGRLYQ 243 Query: 254 EVGL 257 VGL Sbjct: 244 AVGL 247 >tr|A0QYQ1|A0QYQ1_MYCS2 Tax_Id=246196 (rluB)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium smegmatis] Length = 247 Score = 353 bits (907), Expect = 8e-96 Identities = 176/241 (73%), Positives = 199/241 (82%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+LS+AGIASRR AE++II+GRVEVDGQ+V ELGTR Sbjct: 7 VRLQKVLSQAGIASRRVAERMIIDGRVEVDGQIVTELGTRVDPAVADIRVDGSRIILDDT 66 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 YLA+NKPRGM+STMSDDRGRPCVGDL+E RVRGNKKLFHVGRLDADTEGL+LLTNDGE Sbjct: 67 MVYLAINKPRGMHSTMSDDRGRPCVGDLVEHRVRGNKKLFHVGRLDADTEGLLLLTNDGE 126 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS EV KTY+ATV G VPRGLGKKL G+ELDDGPAHVDDFAVVD +PGKT+V Sbjct: 127 LAHRLMHPSFEVPKTYVATVMGTVPRGLGKKLKAGVELDDGPAHVDDFAVVDTVPGKTMV 186 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 ++TLHEGR RIVRRLL A FPV+ LVRT+IG+VSLGDQRPG +RAL R E+ +LY+ VG Sbjct: 187 KVTLHEGRNRIVRRLLAAVDFPVQELVRTEIGSVSLGDQRPGSIRALTRKEVGELYQAVG 246 Query: 257 L 257 L Sbjct: 247 L 247 >tr|Q1B7U8|Q1B7U8_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 247 Score = 348 bits (894), Expect = 3e-94 Identities = 174/241 (72%), Positives = 199/241 (82%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+LS+AGIASRR AEK+I++GRVEVDG +V ELGTR Sbjct: 7 VRLQKVLSQAGIASRRVAEKMILDGRVEVDGHIVTELGTRVDPTAADIRVDGTRVLLDDT 66 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 +LA+NKPRGM+STMSDDRGRPC+GDL+E RVRGNK LFHVGRLDADTEGL+LLTNDGE Sbjct: 67 LVHLAINKPRGMHSTMSDDRGRPCIGDLVEHRVRGNKGLFHVGRLDADTEGLMLLTNDGE 126 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS+EV KTY+ATV G VPRGLGKKL G+ELDDGPA VDDFAVVDA+PG+++V Sbjct: 127 LAHRLMHPSYEVPKTYVATVLGTVPRGLGKKLRAGVELDDGPARVDDFAVVDAMPGRSMV 186 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+TLHEGRKRIVRRLL A GFPV+ LVRTDIGAVSLG+QRPG +R L R EI +LYK VG Sbjct: 187 RVTLHEGRKRIVRRLLAAVGFPVQELVRTDIGAVSLGEQRPGSIRVLTRKEIGELYKAVG 246 Query: 257 L 257 + Sbjct: 247 M 247 >tr|A3Q0P6|A3Q0P6_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 247 Score = 348 bits (894), Expect = 3e-94 Identities = 174/241 (72%), Positives = 199/241 (82%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+LS+AGIASRR AEK+I++GRVEVDG +V ELGTR Sbjct: 7 VRLQKVLSQAGIASRRVAEKMILDGRVEVDGHIVTELGTRVDPTAADIRVDGTRVLLDDT 66 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 +LA+NKPRGM+STMSDDRGRPC+GDL+E RVRGNK LFHVGRLDADTEGL+LLTNDGE Sbjct: 67 LVHLAINKPRGMHSTMSDDRGRPCIGDLVEHRVRGNKGLFHVGRLDADTEGLMLLTNDGE 126 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS+EV KTY+ATV G VPRGLGKKL G+ELDDGPA VDDFAVVDA+PG+++V Sbjct: 127 LAHRLMHPSYEVPKTYVATVLGTVPRGLGKKLRAGVELDDGPARVDDFAVVDAMPGRSMV 186 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+TLHEGRKRIVRRLL A GFPV+ LVRTDIGAVSLG+QRPG +R L R EI +LYK VG Sbjct: 187 RVTLHEGRKRIVRRLLAAVGFPVQELVRTDIGAVSLGEQRPGSIRVLTRKEIGELYKAVG 246 Query: 257 L 257 + Sbjct: 247 M 247 >tr|A1UH59|A1UH59_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 247 Score = 348 bits (894), Expect = 3e-94 Identities = 174/241 (72%), Positives = 199/241 (82%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+LS+AGIASRR AEK+I++GRVEVDG +V ELGTR Sbjct: 7 VRLQKVLSQAGIASRRVAEKMILDGRVEVDGHIVTELGTRVDPTAADIRVDGTRVLLDDT 66 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 +LA+NKPRGM+STMSDDRGRPC+GDL+E RVRGNK LFHVGRLDADTEGL+LLTNDGE Sbjct: 67 LVHLAINKPRGMHSTMSDDRGRPCIGDLVEHRVRGNKGLFHVGRLDADTEGLMLLTNDGE 126 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS+EV KTY+ATV G VPRGLGKKL G+ELDDGPA VDDFAVVDA+PG+++V Sbjct: 127 LAHRLMHPSYEVPKTYVATVLGTVPRGLGKKLRAGVELDDGPARVDDFAVVDAMPGRSMV 186 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+TLHEGRKRIVRRLL A GFPV+ LVRTDIGAVSLG+QRPG +R L R EI +LYK VG Sbjct: 187 RVTLHEGRKRIVRRLLAAVGFPVQELVRTDIGAVSLGEQRPGSIRVLTRKEIGELYKAVG 246 Query: 257 L 257 + Sbjct: 247 M 247 >tr|A4T9Z6|A4T9Z6_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium gilvum] Length = 247 Score = 339 bits (869), Expect = 2e-91 Identities = 171/241 (70%), Positives = 195/241 (80%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+LS+AGIASRR AEK+I +GRVEVD ++V ELGTR Sbjct: 7 VRLQKVLSQAGIASRRVAEKMIRDGRVEVDDRIVTELGTRVDPAESVIRVDGARITVDDT 66 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 +LA+NKPRGM+STMSDDRGRPCVGDL+E RVRGNKKLFHVGRLDADTEGL+LLTNDGE Sbjct: 67 LVHLAINKPRGMHSTMSDDRGRPCVGDLVEHRVRGNKKLFHVGRLDADTEGLLLLTNDGE 126 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS+EV K+Y+ATV G+VPRGLG+KL G+ELDDGP VDDFA+VD PG+TLV Sbjct: 127 LAHRLMHPSYEVPKSYVATVLGSVPRGLGRKLREGVELDDGPVQVDDFALVDTTPGRTLV 186 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+TLHEGRK IVRRLL GFPV+ LVRTDIG VSLGDQRPG +RAL + EI +LYK VG Sbjct: 187 RVTLHEGRKHIVRRLLAEVGFPVQNLVRTDIGGVSLGDQRPGSIRALTQKEIGELYKAVG 246 Query: 257 L 257 L Sbjct: 247 L 247 >tr|A1TA74|A1TA74_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium vanbaalenii] Length = 247 Score = 339 bits (869), Expect = 2e-91 Identities = 170/241 (70%), Positives = 194/241 (80%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 +RLQK+LS+AGIASRR AEK+I +GRVEVDG++V ELGTR Sbjct: 7 IRLQKVLSQAGIASRRVAEKMIRDGRVEVDGRIVTELGTRVDPAASVIRVDGARITVDDT 66 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 YLA+NKPRGM+STMSDDRGRPCVGDL+E RVRGNKKLFHVGRLDADTEGL+LLTNDGE Sbjct: 67 LVYLAINKPRGMHSTMSDDRGRPCVGDLVEHRVRGNKKLFHVGRLDADTEGLLLLTNDGE 126 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS EV K+Y+ATV G+VP+GLG+KL G+EL+DGP VDDFAVVD PG+TLV Sbjct: 127 LAHRLMHPSFEVPKSYVATVLGSVPKGLGRKLREGVELEDGPVQVDDFAVVDTTPGRTLV 186 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+TLHEGRK IVRRLL GFPV+ LVRTDIG VSLGDQRPG +R L + EI +LYK VG Sbjct: 187 RVTLHEGRKHIVRRLLAEVGFPVQELVRTDIGTVSLGDQRPGSIRVLTQKEIGELYKAVG 246 Query: 257 L 257 L Sbjct: 247 L 247 >tr|C1ASX4|C1ASX4_RHOOB Tax_Id=632772 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus opacus] Length = 350 Score = 301 bits (770), Expect = 6e-80 Identities = 160/252 (63%), Positives = 185/252 (73%), Gaps = 5/252 (1%) Query: 11 DRGAG-----AVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXX 65 DR AG +RLQK+L++AG+ASRRAAE+LI +GRVEVDG++V E G R Sbjct: 99 DRPAGPPQGDGMRLQKVLAQAGVASRRAAEELISQGRVEVDGRIVIEQGLRIDPENAVVR 158 Query: 66 XXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADT 125 +LALNKPRG STMSDD GRPCVGD++ RV ++LFHVGRLDADT Sbjct: 159 VDGVRVVVQKDLVHLALNKPRGWQSTMSDDLGRPCVGDIVSERVAAGQRLFHVGRLDADT 218 Query: 126 EGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFA 185 EGL+LLTNDG+LAHRLMHPS EVSKTYLATV GA+ RG+GKKL G+ELDDGPA VD F Sbjct: 219 EGLLLLTNDGDLAHRLMHPSFEVSKTYLATVSGALERGVGKKLKEGVELDDGPAKVDTFT 278 Query: 186 VVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLR 245 ++D GK+LVR+TLHEGRK IVRRL A G PV LVRTDIGAV+LGDQRPG LR L R Sbjct: 279 LLDINEGKSLVRVTLHEGRKHIVRRLFDAVGHPVIRLVRTDIGAVALGDQRPGTLRVLGR 338 Query: 246 DEIRQLYKEVGL 257 E+ LY VGL Sbjct: 339 GEVGGLYGAVGL 350 >tr|Q0SI80|Q0SI80_RHOSR Tax_Id=101510 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus sp.] Length = 241 Score = 300 bits (767), Expect = 1e-79 Identities = 156/241 (64%), Positives = 181/241 (75%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 +RLQK+L++AG+ASRRAAE+LI +GRVEVDG++V E G R Sbjct: 1 MRLQKVLAQAGVASRRAAEELISQGRVEVDGRIVIEQGLRIDPENAVVRVDGVRVVVQKD 60 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 +LALNKPRG STMSDD GRPCVGD++ RV ++LFHVGRLDADTEGL+LLTNDG+ Sbjct: 61 LVHLALNKPRGWQSTMSDDLGRPCVGDIVSERVAAGQRLFHVGRLDADTEGLLLLTNDGD 120 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS EVSKTYLATV GA+ RG+GKKL G+ELDDGPA VD F ++D GK+LV Sbjct: 121 LAHRLMHPSFEVSKTYLATVSGALERGVGKKLKEGVELDDGPAKVDTFTLLDINEGKSLV 180 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+TLHEGRK IVRRL A G PV LVRTDIGAV+LGDQRPG LR L R E+ LY VG Sbjct: 181 RVTLHEGRKHIVRRLFDAVGHPVIRLVRTDIGAVALGDQRPGTLRVLGRGEVGGLYGAVG 240 Query: 257 L 257 L Sbjct: 241 L 241 >tr|C2AQV1|C2AQV1_TSUPA Tax_Id=521096 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Tsukamurella paurometabola DSM 20162] Length = 263 Score = 296 bits (757), Expect = 2e-78 Identities = 148/241 (61%), Positives = 179/241 (74%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 +RLQK+L++AG+ASRR AE++I +GRVEVDG++V E G R Sbjct: 23 IRLQKVLAQAGVASRRVAEEMIADGRVEVDGEIVTEQGLRVDPSVAVVRVDGVRVVVNEN 82 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 +LALNKPRG +STMSDD GRPCVGD++ RV ++LFHVGRLDADTEGL+L+TNDGE Sbjct: 83 LVHLALNKPRGWHSTMSDDMGRPCVGDIVAERVAAGQRLFHVGRLDADTEGLLLVTNDGE 142 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS+EV KTYLA V G VPR LGKKL G+EL+DGP VD F+V++A GK+ V Sbjct: 143 LAHRLMHPSYEVPKTYLAWVAGEVPRNLGKKLRDGVELEDGPVTVDRFSVLEAAEGKSTV 202 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+ LHEGRK IVRRLL G PV+ LVRT +G V+LGDQRPG LR L RDE+ LYK VG Sbjct: 203 RVVLHEGRKHIVRRLLAEVGHPVQRLVRTHVGTVALGDQRPGSLRVLGRDEVESLYKAVG 262 Query: 257 L 257 + Sbjct: 263 M 263 >tr|B1MB30|B1MB30_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium abscessus] Length = 263 Score = 295 bits (755), Expect = 3e-78 Identities = 154/241 (63%), Positives = 181/241 (75%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 +RLQK+LS+AGIASRR AE++I +GRVEVDG++V E G R Sbjct: 23 IRLQKVLSQAGIASRRVAERMIYDGRVEVDGEIVTEQGRRIDPAVNVVRVDGARVIMNTD 82 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 YLALNKP GM STMSDDRGRPCVG LIE RVRGN+ + +VGRLDADT GLILLTNDGE Sbjct: 83 LVYLALNKPFGMLSTMSDDRGRPCVGKLIEERVRGNQGVRNVGRLDADTVGLILLTNDGE 142 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 L HRLMHPS+EV KTY+ATV G +PRGLG++L G+EL DGPA VD+F + G+++V Sbjct: 143 LTHRLMHPSYEVPKTYIATVAGTIPRGLGRQLRDGVELADGPAKVDEFKFLGTTDGQSMV 202 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 +LTLHEGR RIVRR++ AAG PV LVRT IG V+LG+QRPG LRAL RDEI LYK VG Sbjct: 203 QLTLHEGRNRIVRRMMDAAGHPVVELVRTKIGDVTLGNQRPGSLRALGRDEIGSLYKAVG 262 Query: 257 L 257 L Sbjct: 263 L 263 >tr|D0L940|D0L940_9ACTO Tax_Id=526226 SubName: Full=Pseudouridine synthase;[Gordonia bronchialis DSM 43247] Length = 329 Score = 294 bits (753), Expect = 6e-78 Identities = 150/255 (58%), Positives = 183/255 (71%) Query: 3 VEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXX 62 V+ DS A VRLQK+L++AG+ASRR AE++I GRVE+DG++V E G R Sbjct: 75 VDPADSGATYVADGVRLQKVLAQAGVASRRGAEEMIAAGRVEIDGEIVTEQGLRIDPDTA 134 Query: 63 XXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLD 122 YLALNKPRG STM+DD+GRPCVGD++ RV ++LFHVGRLD Sbjct: 135 IIRVDGARVIIDETRQYLALNKPRGWQSTMADDQGRPCVGDIVAERVMAGQRLFHVGRLD 194 Query: 123 ADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVD 182 ADTEGL+LLTNDGELAHRLMHPS+EV KTYLATV+G VPR L + L G+ELDDGP VD Sbjct: 195 ADTEGLLLLTNDGELAHRLMHPSYEVPKTYLATVRGEVPRSLSRMLRDGVELDDGPVAVD 254 Query: 183 DFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRA 242 +VD G++L+R+TLHEGR RIVRR++ GFPV LVRT +G+V+LG+QRPG LR Sbjct: 255 KLTIVDVHEGQSLLRITLHEGRNRIVRRMMDEVGFPVVELVRTHVGSVALGEQRPGSLRV 314 Query: 243 LLRDEIRQLYKEVGL 257 L RDE+ LYK VGL Sbjct: 315 LGRDEVGALYKAVGL 329 >tr|C1A029|C1A029_RHOE4 Tax_Id=234621 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus erythropolis] Length = 267 Score = 285 bits (728), Expect = 4e-75 Identities = 148/241 (61%), Positives = 174/241 (72%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L++AG+ASRRAAE+LI +GRVEVDG++V E G R Sbjct: 27 VRLQKVLAQAGVASRRAAEELIDQGRVEVDGRIVVEQGLRVDPENAVVRVDGVRVVVQKD 86 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 YLA+NKPRG TMSDD GRPCVGD++ RV+ ++LFHVGRLDADTEGL+L TNDG+ Sbjct: 87 LVYLAMNKPRGWQCTMSDDLGRPCVGDIVSERVQSGQRLFHVGRLDADTEGLLLFTNDGD 146 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS EV KTYLATV G V R GK+L G+ LDDGPA VD F V++ GKTLV Sbjct: 147 LAHRLMHPSFEVPKTYLATVHGVVERSTGKQLRDGVTLDDGPAKVDAFTVLEINEGKTLV 206 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 +L LHEGRK IVRRLL A G PV LVRT++G V+LGDQRPG R L R E+ LY+ VG Sbjct: 207 KLVLHEGRKHIVRRLLDAVGHPVVRLVRTNVGVVALGDQRPGTQRVLGRSEVGGLYEAVG 266 Query: 257 L 257 L Sbjct: 267 L 267 >tr|C3JWQ3|C3JWQ3_RHOER Tax_Id=596309 RecName: Full=Pseudouridine synthase; EC=5.4.99.-; Flags: Fragment;[Rhodococcus erythropolis SK121] Length = 354 Score = 285 bits (728), Expect = 4e-75 Identities = 148/241 (61%), Positives = 174/241 (72%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L++AG+ASRRAAE+LI +GRVEVDG++V E G R Sbjct: 114 VRLQKVLAQAGVASRRAAEELIDQGRVEVDGRIVVEQGLRVDPENAVVRVDGVRVVVQKD 173 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 YLA+NKPRG TMSDD GRPCVGD++ RV+ ++LFHVGRLDADTEGL+L TNDG+ Sbjct: 174 LVYLAMNKPRGWQCTMSDDLGRPCVGDIVSERVQSGQRLFHVGRLDADTEGLLLFTNDGD 233 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAHRLMHPS EV KTYLATV G V R GK+L G+ LDDGPA VD F V++ GKTLV Sbjct: 234 LAHRLMHPSFEVPKTYLATVHGVVERSTGKQLRDGVTLDDGPAKVDAFTVLEINEGKTLV 293 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 +L LHEGRK IVRRLL A G PV LVRT++G V+LGDQRPG R L R E+ LY+ VG Sbjct: 294 KLVLHEGRKHIVRRLLDAVGHPVVRLVRTNVGVVALGDQRPGTQRVLGRSEVGGLYEAVG 353 Query: 257 L 257 L Sbjct: 354 L 354 >tr|C6WA55|C6WA55_ACTMD Tax_Id=446462 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Actinosynnema mirum] Length = 246 Score = 280 bits (716), Expect = 1e-73 Identities = 145/247 (58%), Positives = 175/247 (70%), Gaps = 3/247 (1%) Query: 11 DRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXX 70 D G+ VRLQK+L++AGIASRR AE+LI GRV+VDG++VRE G R Sbjct: 3 DPGSEGVRLQKVLAKAGIASRRVAEELIELGRVQVDGEVVREQGRRIDPDKAVVHVDGVR 62 Query: 71 XXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLIL 130 L LNKPRGM STM DD RPCVGDL+ R ++LFHVGRLDADTEGL+L Sbjct: 63 VVLQEDVVTLVLNKPRGMLSTMHDDAHRPCVGDLLVNR---KERLFHVGRLDADTEGLLL 119 Query: 131 LTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAI 190 +TNDG+LAHRLMHPS+EV KTYLA V G +PR LGK+L G+EL+DGP VD F ++ ++ Sbjct: 120 VTNDGDLAHRLMHPSYEVPKTYLAEVPGPIPRDLGKRLRSGIELEDGPVKVDSFKLISSL 179 Query: 191 PGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQ 250 PG+ LV + LHEGRK IVRRLL A G PV+ LVRT +G V LG+QRPG LR L R E+ Sbjct: 180 PGRALVEVVLHEGRKHIVRRLLEAVGHPVQTLVRTAVGEVRLGNQRPGSLRVLNRQEVGS 239 Query: 251 LYKEVGL 257 LYK VG+ Sbjct: 240 LYKAVGM 246 >tr|Q5YY84|Q5YY84_NOCFA Tax_Id=37329 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Nocardia farcinica] Length = 237 Score = 273 bits (698), Expect = 1e-71 Identities = 143/237 (60%), Positives = 174/237 (73%), Gaps = 1/237 (0%) Query: 22 ILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXXXXYLA 81 +L++AG+ASRRAAE++I +GRVEVDG +VRE G R Y+A Sbjct: 1 MLAKAGVASRRAAEEMIDQGRVEVDGVIVREQGLRIDPQTAVVRVDGVRVVVRDEQVYVA 60 Query: 82 LNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGELAHRL 141 LNKP+G STMSDD GRPCVGD++ R+ ++LFHVGRLDADTEGL+LLTNDG+LAHRL Sbjct: 61 LNKPKGWQSTMSDDLGRPCVGDIVAERIAAGQRLFHVGRLDADTEGLLLLTNDGDLAHRL 120 Query: 142 MHPSHEVSKTYLATVKGAV-PRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLVRLTL 200 MHPS EVSKTYLATV G V + +GK+L G+EL+DGPA VD F V++ G++LV++ L Sbjct: 121 MHPSFEVSKTYLATVHGEVHHKVIGKRLRDGIELEDGPAKVDRFQVLELGEGRSLVKIVL 180 Query: 201 HEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVGL 257 HEGRK IVRRLL A G PV LVRT IG V+LGDQRPG LR L RDEI +LY+ V L Sbjct: 181 HEGRKHIVRRLLDAVGHPVTRLVRTHIGPVALGDQRPGTLRVLGRDEIGKLYEAVSL 237 >tr|B1VH07|B1VH07_CORU7 Tax_Id=504474 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium urealyticum] Length = 291 Score = 270 bits (689), Expect = 1e-70 Identities = 141/241 (58%), Positives = 170/241 (70%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L+ AG+ASRR +EKLI GRVEV+G++V +G R Sbjct: 51 VRLQKVLAAAGVASRRMSEKLIAAGRVEVNGKVVDRMGVRIDPNKDVVRVDGVRVQVNDE 110 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y NKPRG+ STMSDD GRP VG+ I+ R++ + LFHVGRLDA TEGL+LLTNDGE Sbjct: 111 MHYYIFNKPRGVQSTMSDDMGRPSVGNFIDERLKQGQGLFHVGRLDAQTEGLLLLTNDGE 170 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RLMHPS+EVSKTY+ATV G +GL +L G+ELDDG A DD +VD GK+L+ Sbjct: 171 LANRLMHPSYEVSKTYMATVLGEAKKGLVHELKKGIELDDGIAKADDVQIVDVWQGKSLI 230 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 +L LHEGRK IVRRLL AAGFPV+ LVRT I V LGDQ+PG +RAL R E+ LYK VG Sbjct: 231 KLELHEGRKHIVRRLLKAAGFPVQALVRTKIHTVQLGDQKPGSVRALNRSELTSLYKAVG 290 Query: 257 L 257 L Sbjct: 291 L 291 >tr|Q6NHE3|Q6NHE3_CORDI Tax_Id=1717 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium diphtheriae] Length = 321 Score = 267 bits (683), Expect = 7e-70 Identities = 139/255 (54%), Positives = 173/255 (67%), Gaps = 3/255 (1%) Query: 6 HDSRMDRGAGA---VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXX 62 H R + G G+ +RLQK+L++AG+ASRR AE LI GRVEV+G++V G R Sbjct: 67 HVGRREAGDGSTEGIRLQKVLAQAGVASRRHAEILIDAGRVEVNGKIVMTQGMRVNPNVD 126 Query: 63 XXXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLD 122 Y LNKPRG+ STMSDD GRPCVGD++ R+ ++LFHVGRLD Sbjct: 127 VIRVDGVRVNVNENLQYFVLNKPRGLQSTMSDDMGRPCVGDIVGERISAGQRLFHVGRLD 186 Query: 123 ADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVD 182 A TEGL+LLTNDGELA+RLMHP +EVSKTYLATV G + L K+L G+ELDDGPA D Sbjct: 187 AATEGLLLLTNDGELANRLMHPRYEVSKTYLATVLGEADKRLVKQLRDGIELDDGPAKAD 246 Query: 183 DFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRA 242 ++D GK+L+R+ LHEGRK IVRR+L AGFPV+ LVRT I + LG+Q PG +RA Sbjct: 247 LVQIIDTFQGKSLIRIELHEGRKHIVRRMLKTAGFPVQRLVRTKIHTIQLGEQTPGAIRA 306 Query: 243 LLRDEIRQLYKEVGL 257 L E+ LYK VG+ Sbjct: 307 LNSSELASLYKAVGM 321 >tr|Q8FTK7|Q8FTK7_COREF Tax_Id=152794 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium efficiens] Length = 329 Score = 267 bits (682), Expect = 1e-69 Identities = 139/249 (55%), Positives = 171/249 (68%), Gaps = 1/249 (0%) Query: 10 MDRGAG-AVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXX 68 ++R +G +RLQK+L++AG+ASRR AE LI GRVEV+G++V GTR Sbjct: 81 LNRNSGEGIRLQKVLAQAGVASRRHAEILIDNGRVEVNGRIVTTQGTRVNPNSDVIRVDG 140 Query: 69 XXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGL 128 Y LNKPRGM+STMSDD GRPCVGDL+ + ++LFHVGRLDADTEGL Sbjct: 141 VRININEDLEYFVLNKPRGMHSTMSDDLGRPCVGDLVSEKTASGQRLFHVGRLDADTEGL 200 Query: 129 ILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVD 188 +LLTNDGELA+RLMHP +EV KTYLATV+G L L G+EL+DGPA D ++D Sbjct: 201 LLLTNDGELANRLMHPKYEVRKTYLATVRGEAGPNLVTTLRKGIELEDGPAKADYVQIID 260 Query: 189 AIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEI 248 GK+L+RL +HEGRK IVRR+L AGFPVE LVRT + V LG+Q+PG LRAL E+ Sbjct: 261 TFQGKSLIRLEIHEGRKHIVRRMLDEAGFPVERLVRTKLHTVQLGEQKPGSLRALNASEL 320 Query: 249 RQLYKEVGL 257 LYK V L Sbjct: 321 ASLYKVVEL 329 >tr|C7MZG0|C7MZG0_SACVD Tax_Id=471857 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Saccharomonospora viridis] Length = 247 Score = 267 bits (682), Expect = 1e-69 Identities = 140/240 (58%), Positives = 168/240 (70%), Gaps = 3/240 (1%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L++AG+ASRRA+E+LI GRV VDG +VRELG R Sbjct: 10 VRLQKVLAKAGVASRRASEELIAAGRVSVDGVVVRELGRRVDPDTAVIHVDGIRVQVRDD 69 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 YLALNKPRG++STMSD +GRPCVGD + R ++LFHVGRLDADTEGL+LLTNDG+ Sbjct: 70 LVYLALNKPRGVHSTMSDAQGRPCVGDYVADRP---ERLFHVGRLDADTEGLLLLTNDGD 126 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LAH+LMHPS V+KTYLA V+GAV RGLGK+L G++L DGP D F + D P ++LV Sbjct: 127 LAHKLMHPSFHVTKTYLAEVEGAVARGLGKRLRAGVQLSDGPVTADAFRIKDVRPNRSLV 186 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 + LHEGRK IVRRLL G PV LVRT IG V LG +PG LR L + EI LY+ VG Sbjct: 187 EIVLHEGRKHIVRRLLAEVGHPVRKLVRTAIGEVRLGTTKPGTLRTLTQQEIGLLYRAVG 246 >tr|C8NNL7|C8NNL7_COREF Tax_Id=196164 SubName: Full=RNA pseudouridine synthase; EC=4.2.1.70;[Corynebacterium efficiens YS-314] Length = 329 Score = 267 bits (682), Expect = 1e-69 Identities = 139/249 (55%), Positives = 171/249 (68%), Gaps = 1/249 (0%) Query: 10 MDRGAG-AVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXX 68 ++R +G +RLQK+L++AG+ASRR AE LI GRVEV+G++V GTR Sbjct: 81 LNRNSGEGIRLQKVLAQAGVASRRHAEILIDNGRVEVNGRIVTTQGTRVNPNSDVIRVDG 140 Query: 69 XXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGL 128 Y LNKPRGM+STMSDD GRPCVGDL+ + ++LFHVGRLDADTEGL Sbjct: 141 VRININEDLEYFVLNKPRGMHSTMSDDLGRPCVGDLVSEKTASGQRLFHVGRLDADTEGL 200 Query: 129 ILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVD 188 +LLTNDGELA+RLMHP +EV KTYLATV+G L L G+EL+DGPA D ++D Sbjct: 201 LLLTNDGELANRLMHPKYEVRKTYLATVRGEAGPNLVTTLRKGIELEDGPAKADYVQIID 260 Query: 189 AIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEI 248 GK+L+RL +HEGRK IVRR+L AGFPVE LVRT + V LG+Q+PG LRAL E+ Sbjct: 261 TFQGKSLIRLEIHEGRKHIVRRMLDEAGFPVERLVRTKLHTVQLGEQKPGSLRALNASEL 320 Query: 249 RQLYKEVGL 257 LYK V L Sbjct: 321 ASLYKVVEL 329 >tr|Q4JVW6|Q4JVW6_CORJK Tax_Id=306537 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium jeikeium] Length = 290 Score = 266 bits (681), Expect = 1e-69 Identities = 136/241 (56%), Positives = 173/241 (71%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L+ AG+ASRR +EKLI GRVEV+G++V ++GTR Sbjct: 50 VRLQKVLASAGVASRRMSEKLIAAGRVEVNGEVVVKMGTRIDPSVDIVRVDGERVQVNEE 109 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y LNKPRG++STMSDD GRPCVGDL+ R++ + LFHVGRLDA TEGL+LLTNDGE Sbjct: 110 MVYFVLNKPRGVHSTMSDDLGRPCVGDLVGTRLKEGQGLFHVGRLDAQTEGLLLLTNDGE 169 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RLMHP +EV KTY+ATV G R L ++L G+ELDDG A D +VD GK+L+ Sbjct: 170 LANRLMHPKYEVKKTYMATVLGEASRKLIRELKDGVELDDGIARADSVQIVDVWQGKSLI 229 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 ++ LHEGRK IVRR+L AGFPV+ LVRT I V LG+Q+PG +RAL + E++ +YK+VG Sbjct: 230 KVELHEGRKHIVRRMLKEAGFPVQALVRTKIHTVQLGEQKPGTIRALNQAELQSMYKKVG 289 Query: 257 L 257 L Sbjct: 290 L 290 >tr|C8RSZ6|C8RSZ6_CORJE Tax_Id=525262 (rluB)SubName: Full=RNA pseudouridylate synthase; EC=4.2.1.70;[Corynebacterium jeikeium ATCC 43734] Length = 290 Score = 266 bits (681), Expect = 1e-69 Identities = 136/241 (56%), Positives = 173/241 (71%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L+ AG+ASRR +EKLI GRVEV+G++V ++GTR Sbjct: 50 VRLQKVLASAGVASRRMSEKLIAAGRVEVNGEVVVKMGTRIDPSVDIVRVDGERVQVNEE 109 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y LNKPRG++STMSDD GRPCVGDL+ R++ + LFHVGRLDA TEGL+LLTNDGE Sbjct: 110 MVYFVLNKPRGVHSTMSDDLGRPCVGDLVGTRLKEGQGLFHVGRLDAQTEGLLLLTNDGE 169 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RLMHP +EV KTY+ATV G R L ++L G+ELDDG A D +VD GK+L+ Sbjct: 170 LANRLMHPKYEVKKTYMATVLGEASRKLIRELKDGVELDDGIARADSVQIVDVWQGKSLI 229 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 ++ LHEGRK IVRR+L AGFPV+ LVRT I V LG+Q+PG +RAL + E++ +YK+VG Sbjct: 230 KVELHEGRKHIVRRMLKEAGFPVQALVRTKIHTVQLGEQKPGTIRALNQAELQSMYKKVG 289 Query: 257 L 257 L Sbjct: 290 L 290 >tr|C3PGG1|C3PGG1_CORA7 Tax_Id=548476 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium aurimucosum] Length = 305 Score = 261 bits (668), Expect = 4e-68 Identities = 137/240 (57%), Positives = 169/240 (70%) Query: 18 RLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXXX 77 RLQK+L++AG+ASRR AE LI EGRVEV+GQ++ + GTR Sbjct: 66 RLQKVLAKAGVASRRHAEILIDEGRVEVNGQVIIKQGTRVDPNKDVIRVDGTRINVNEET 125 Query: 78 XYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGEL 137 Y LNKPRGM STMSDD GRPCVGD++ RV ++LFHVGRLDADTEGL+LLTNDGEL Sbjct: 126 QYFVLNKPRGMQSTMSDDMGRPCVGDVVADRVVAGQRLFHVGRLDADTEGLLLLTNDGEL 185 Query: 138 AHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLVR 197 A+RLMHP +EV+KTYLATV G + L ++L G+EL+DG A D +VD G +LVR Sbjct: 186 ANRLMHPKYEVTKTYLATVLGEADKKLIRQLREGIELEDGLAQADYVQIVDKNQGYSLVR 245 Query: 198 LTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVGL 257 + LHEGRK IVRR+L AG+PV+ LVRT + V LGD +PG LRAL +E+ LYK VG+ Sbjct: 246 VELHEGRKHIVRRMLKEAGYPVQRLVRTKLHTVQLGDMKPGSLRALNSNELTSLYKAVGM 305 >tr|C5VBT2|C5VBT2_9CORY Tax_Id=553207 (rluB)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium matruchotii ATCC 14266] Length = 285 Score = 261 bits (666), Expect = 7e-68 Identities = 135/239 (56%), Positives = 166/239 (69%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L++AG+ASRR AE +I GRVEV+G +V + G R Sbjct: 45 VRLQKVLAQAGVASRRNAEIMIDSGRVEVNGAVVMQQGVRVNPKVDVIRVDGVRVNVNNN 104 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y LNKPRG++STMSDD GRPC+GDL+ R+ + LFHVGRLDADTEGLILLTNDGE Sbjct: 105 HQYFVLNKPRGIHSTMSDDLGRPCIGDLVSERISAGQGLFHVGRLDADTEGLILLTNDGE 164 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RL HP +EVSKTY+A V G R L L G+ELDDGPA D +VD G++LV Sbjct: 165 LANRLSHPKYEVSKTYIAEVLGEADRSLVTTLKNGVELDDGPAAADYVQIVDVHQGRSLV 224 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEV 255 R+ LHEGRK IVRR+L AAG+PV+ LVRT + V LG+Q+PG +RAL +E+R LYK V Sbjct: 225 RVQLHEGRKHIVRRMLKAAGYPVQYLVRTKLHTVQLGEQKPGTIRALNDNELRSLYKAV 283 >tr|A4FKA2|A4FKA2_SACEN Tax_Id=405948 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Saccharopolyspora erythraea] Length = 253 Score = 260 bits (665), Expect = 9e-68 Identities = 133/244 (54%), Positives = 169/244 (69%), Gaps = 3/244 (1%) Query: 14 AGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXX 73 A VRLQK+LS+AG+ASRRAAE++I+EGRVEV+G++V ELGTR Sbjct: 13 AEGVRLQKVLSQAGVASRRAAEQMIVEGRVEVNGEIVLELGTRVDPDTAVIHVDGNRIMV 72 Query: 74 XXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTN 133 +L LNKP+G+ TMSDD+GRPC+GD + R +L+HVGRLD D+EGL+L+TN Sbjct: 73 NADLTHLLLNKPKGILCTMSDDQGRPCIGDYLRER---QGRLYHVGRLDVDSEGLLLITN 129 Query: 134 DGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGK 193 DGELAHRLMHPS+ + KTYLA V G +P+ LG++L G+EL+DGP VD F +VD G+ Sbjct: 130 DGELAHRLMHPSYRILKTYLAEVPGPIPKNLGRELRNGIELEDGPVKVDSFKLVDVNEGR 189 Query: 194 TLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYK 253 LV + LHEGRK +VRRLL G PV LVRT +G V L +R G +R L R EI LY+ Sbjct: 190 ALVEVVLHEGRKHVVRRLLKQVGHPVLRLVRTAVGDVRLTTERQGAIRPLDRKEISSLYR 249 Query: 254 EVGL 257 VGL Sbjct: 250 AVGL 253 >tr|Q8NQK8|Q8NQK8_CORGL Tax_Id=1718 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 252 Score = 259 bits (663), Expect = 2e-67 Identities = 135/241 (56%), Positives = 164/241 (68%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L++AG+ASRR AE LI +GRVEV+ ++V G R Sbjct: 12 VRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVDPNNDVIRVDGVRIHINED 71 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y LNKPRGM+STMSD+ GRPCVGDL+ + ++LFHVGRLDADTEGL+LLTNDGE Sbjct: 72 LEYFVLNKPRGMHSTMSDELGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDGE 131 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RLMHP +EVSKTYLATV+G L L G+EL+DGPA D ++D GK+L+ Sbjct: 132 LANRLMHPKYEVSKTYLATVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGKSLL 191 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+ +HEGRK IVRRL GFPVE LVRT + V LGDQ+PG LRAL E+ LYK V Sbjct: 192 RIEIHEGRKHIVRRLFDELGFPVERLVRTKLHTVQLGDQKPGSLRALNSSELTSLYKVVQ 251 Query: 257 L 257 L Sbjct: 252 L 252 >tr|A4QE19|A4QE19_CORGB Tax_Id=340322 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 320 Score = 259 bits (663), Expect = 2e-67 Identities = 135/241 (56%), Positives = 164/241 (68%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L++AG+ASRR AE LI +GRVEV+ ++V G R Sbjct: 80 VRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVNPNNDVIRVDGVRIHINED 139 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y LNKPRGM+STMSD+ GRPCVGDL+ + ++LFHVGRLDADTEGL+LLTNDGE Sbjct: 140 LEYFVLNKPRGMHSTMSDELGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDGE 199 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RLMHP +EVSKTYLATV+G L L G+EL+DGPA D ++D GK+L+ Sbjct: 200 LANRLMHPKYEVSKTYLATVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGKSLL 259 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+ +HEGRK IVRRL GFPVE LVRT + V LGDQ+PG LRAL E+ LYK V Sbjct: 260 RIEIHEGRKHIVRRLFDELGFPVERLVRTKLHTVQLGDQKPGSLRALNSSELTSLYKVVQ 319 Query: 257 L 257 L Sbjct: 320 L 320 >tr|Q6M5E9|Q6M5E9_CORGL Tax_Id=1718 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 320 Score = 259 bits (663), Expect = 2e-67 Identities = 135/241 (56%), Positives = 164/241 (68%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 VRLQK+L++AG+ASRR AE LI +GRVEV+ ++V G R Sbjct: 80 VRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVDPNNDVIRVDGVRIHINED 139 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y LNKPRGM+STMSD+ GRPCVGDL+ + ++LFHVGRLDADTEGL+LLTNDGE Sbjct: 140 LEYFVLNKPRGMHSTMSDELGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDGE 199 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RLMHP +EVSKTYLATV+G L L G+EL+DGPA D ++D GK+L+ Sbjct: 200 LANRLMHPKYEVSKTYLATVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGKSLL 259 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVG 256 R+ +HEGRK IVRRL GFPVE LVRT + V LGDQ+PG LRAL E+ LYK V Sbjct: 260 RIEIHEGRKHIVRRLFDELGFPVERLVRTKLHTVQLGDQKPGSLRALNSSELTSLYKVVQ 319 Query: 257 L 257 L Sbjct: 320 L 320 >tr|C0E3H3|C0E3H3_9CORY Tax_Id=566549 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium matruchotii ATCC 33806] Length = 241 Score = 259 bits (663), Expect = 2e-67 Identities = 134/239 (56%), Positives = 166/239 (69%) Query: 17 VRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXX 76 +RLQK+L++AG+ASRR AE +I GRVEV+G +V + G R Sbjct: 1 MRLQKVLAQAGVASRRNAEIMIDSGRVEVNGAVVMQQGVRVNPEVDVIRVDGVRVNVNNN 60 Query: 77 XXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGE 136 Y LNKPRG++STMSDD GRPC+GDL+ R+ + LFHVGRLDADTEGLILLTNDGE Sbjct: 61 HQYFVLNKPRGIHSTMSDDLGRPCIGDLVSERISAGQGLFHVGRLDADTEGLILLTNDGE 120 Query: 137 LAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLV 196 LA+RL HP +EVSKTY+A V G R L L G+ELDDGPA D +VD G++LV Sbjct: 121 LANRLSHPKYEVSKTYIAEVLGEADRSLVTTLKNGVELDDGPAAADYVQIVDVHQGRSLV 180 Query: 197 RLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEV 255 R+ LHEGRK IVRR+L AAG+PV+ LVRT + V LG+Q+PG +RAL +E+R LYK V Sbjct: 181 RVQLHEGRKHIVRRMLKAAGYPVQYLVRTKLHTVQLGEQKPGTIRALNDNELRSLYKAV 239 >tr|C5C6J9|C5C6J9_BEUC1 Tax_Id=471853 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Beutenbergia cavernae] Length = 245 Score = 259 bits (661), Expect = 3e-67 Identities = 139/248 (56%), Positives = 167/248 (67%), Gaps = 3/248 (1%) Query: 10 MDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXX 69 M A VRLQK+L+ AG+ SRRA E LI GRV VDG++VRELGTR Sbjct: 1 MSAPAEGVRLQKVLAGAGLGSRRACEDLISAGRVSVDGEVVRELGTRVDPTAAVIHVDGL 60 Query: 70 XXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLI 129 LALNKPRG++STM DDRGRP + +L+ R ++LFHVGRLDADTEGL+ Sbjct: 61 RLQLDPGVVTLALNKPRGVHSTMHDDRGRPALAELVADRP---ERLFHVGRLDADTEGLL 117 Query: 130 LLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDA 189 LLTNDGELAHRL HPS+EV KTY+A V G V RGLG++L G+ELDDGPA VD F +++ Sbjct: 118 LLTNDGELAHRLAHPSYEVPKTYVARVTGRVARGLGRRLKDGIELDDGPARVDRFTILEQ 177 Query: 190 IPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIR 249 P +V L LHEGR RIVRRLL AAG PV+ L RT +G V LG RPG R + +E+ Sbjct: 178 GPDSAVVELVLHEGRNRIVRRLLDAAGHPVQRLTRTRVGPVLLGQLRPGATRVIDGEELG 237 Query: 250 QLYKEVGL 257 +L VGL Sbjct: 238 RLMSSVGL 245 >tr|B8HGG0|B8HGG0_ARTCA Tax_Id=452863 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Arthrobacter chlorophenolicus] Length = 403 Score = 256 bits (655), Expect = 1e-66 Identities = 128/254 (50%), Positives = 165/254 (64%), Gaps = 6/254 (2%) Query: 4 EIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXX 63 E+HD A VRLQK+++ AG+ASRR E++I EGRVEVDGQ+V ELG R Sbjct: 156 ELHD------ADGVRLQKVMASAGVASRRVCEEMIAEGRVEVDGQVVTELGVRIDPATAV 209 Query: 64 XXXXXXXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDA 123 Y+ NKP+G+ STM D GRPC+ D ++ ++LFHVGRLD Sbjct: 210 IHVDGLRIQLDENLVYMVFNKPKGVVSTMEDPDGRPCISDFLKNNKNTGERLFHVGRLDV 269 Query: 124 DTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDD 183 TEGL+LLTNDGELA+RL HPS+EV KTYL V+G P+G+G +L G+EL+DGPA VD Sbjct: 270 ATEGLLLLTNDGELANRLTHPSYEVPKTYLVQVRGPFPQGIGAQLKAGVELEDGPAAVDS 329 Query: 184 FAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRAL 243 F +VD+ PG L+ + LH G+ RIVRR+ A GFPV+ LVR +G + LGDQR G +R L Sbjct: 330 FRLVDSTPGHVLIEVVLHSGKNRIVRRMFDAVGFPVQRLVRVKVGPIGLGDQRQGSIRNL 389 Query: 244 LRDEIRQLYKEVGL 257 + E+ L VGL Sbjct: 390 GKQEVGHLLASVGL 403 >tr|C6RBQ2|C6RBQ2_9CORY Tax_Id=553206 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium tuberculostearicum SK141] Length = 303 Score = 255 bits (652), Expect = 3e-66 Identities = 134/238 (56%), Positives = 164/238 (68%) Query: 18 RLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXXX 77 RLQK+L++AG+ASRR AE LI GRVEV+G+++ + G + Sbjct: 64 RLQKVLAKAGVASRRHAEILIDAGRVEVNGKIISKQGVKVNPSVDVIRVDGVRVNVNEEH 123 Query: 78 XYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGEL 137 Y LNKPRGM STMSDD GRPCVGD++ +V ++LFHVGRLDADTEGL++LTNDGEL Sbjct: 124 EYFVLNKPRGMQSTMSDDLGRPCVGDVVSEKVAAGQRLFHVGRLDADTEGLLILTNDGEL 183 Query: 138 AHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLVR 197 A+RLMHP +EV+KTYLATV G R L ++L G+EL+DG A D VVD G +LVR Sbjct: 184 ANRLMHPKYEVTKTYLATVLGEADRKLVRQLKEGIELEDGLAKADFAQVVDTNQGYSLVR 243 Query: 198 LTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEV 255 L LHEGRK IVRR+L AGFPV+ LVRT + V LGD +PG LRAL E+ LYK V Sbjct: 244 LELHEGRKHIVRRMLKEAGFPVQRLVRTKLHTVQLGDMKPGGLRALNSSELTSLYKAV 301 >tr|C2BPU0|C2BPU0_9CORY Tax_Id=525264 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium pseudogenitalium ATCC 33035] Length = 303 Score = 255 bits (652), Expect = 3e-66 Identities = 134/238 (56%), Positives = 164/238 (68%) Query: 18 RLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXXX 77 RLQK+L++AG+ASRR AE LI GRVEV+G+++ + G + Sbjct: 64 RLQKVLAKAGVASRRHAEILIDAGRVEVNGKIIAKQGVKVNPSVDVIRVDGVRVNVNEEH 123 Query: 78 XYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGEL 137 Y LNKPRGM STMSDD GRPCVGD++ +V ++LFHVGRLDADTEGL++LTNDGEL Sbjct: 124 EYFVLNKPRGMQSTMSDDLGRPCVGDVVSEKVAAGQRLFHVGRLDADTEGLLILTNDGEL 183 Query: 138 AHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLVR 197 A+RLMHP +EV+KTYLATV G R L ++L G+EL+DG A D VVD G +LVR Sbjct: 184 ANRLMHPKYEVTKTYLATVLGEADRKLVRQLKEGIELEDGLAKADFAQVVDTNQGYSLVR 243 Query: 198 LTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEV 255 L LHEGRK IVRR+L AGFPV+ LVRT + V LGD +PG LRAL E+ LYK V Sbjct: 244 LELHEGRKHIVRRMLKEAGFPVQRLVRTKLHTVQLGDMKPGGLRALNSSELTSLYKAV 301 >tr|C8XHP1|C8XHP1_NAKMY Tax_Id=479431 SubName: Full=Pseudouridine synthase;[Nakamurella multipartita] Length = 249 Score = 254 bits (650), Expect = 5e-66 Identities = 135/249 (54%), Positives = 171/249 (68%), Gaps = 3/249 (1%) Query: 9 RMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXX 68 R + VRLQK+L+ AG+ASRR AE+LI +GRV+VDG +VRE+GTR Sbjct: 4 RSEAADDGVRLQKVLASAGVASRRKAEELIRDGRVKVDGIVVREMGTRIDPENAVVHVDG 63 Query: 69 XXXXXXXXXXYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGL 128 YLALNK RG+ STMSD+ GRP +G ++E R +++LFHVGRLD ++EGL Sbjct: 64 NRITTRTDLVYLALNKERGVLSTMSDELGRPHIGQMLEDR---SERLFHVGRLDMESEGL 120 Query: 129 ILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVD 188 +LLTNDG+LAHRL HPS+ V+KTY+A V G +P+ LG++L G+EL+DGPA VD F V+D Sbjct: 121 LLLTNDGDLAHRLTHPSYGVAKTYVAEVPGPIPKDLGRRLKAGVELEDGPAKVDSFDVMD 180 Query: 189 AIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEI 248 + +V + +HEGRK IVRRLL A PV LVRT IG V LG QRPG LR L E+ Sbjct: 181 LHHNRAVVEVVIHEGRKHIVRRLLEAVDRPVSRLVRTQIGPVQLGHQRPGTLRKLNPVEV 240 Query: 249 RQLYKEVGL 257 QLYK VGL Sbjct: 241 SQLYKAVGL 249 >tr|C2CMC7|C2CMC7_CORST Tax_Id=525268 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium striatum ATCC 6940] Length = 287 Score = 254 bits (648), Expect = 8e-66 Identities = 133/240 (55%), Positives = 165/240 (68%) Query: 18 RLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRXXXXXXXXXXXXXXXXXXXXX 77 RLQK+L++AG+ASRR AE +I GRVEV+G++V + G R Sbjct: 48 RLQKVLAKAGVASRRHAEIMIDAGRVEVNGKIVMQQGVRVDPNVDVIRVDGVRINVNEET 107 Query: 78 XYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGEL 137 Y LNKPRG+ STMSD+ GRPC+GDLI RV ++LFHVGRLDADTEGLIL+TNDGEL Sbjct: 108 RYFILNKPRGLQSTMSDELGRPCIGDLIGDRVAAGQRLFHVGRLDADTEGLILITNDGEL 167 Query: 138 AHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKTLVR 197 A+RLMHP +EV KTYLATV G GL + L G+EL+DG A D +VD G +LVR Sbjct: 168 ANRLMHPKYEVRKTYLATVLGEAGNGLVRTLKEGVELEDGLAKADYVQIVDKNQGYSLVR 227 Query: 198 LTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRALLRDEIRQLYKEVGL 257 + LHEGRK IVRR+L AGFPV+ LVRT + + LG+ +PG LRAL +E+ LYK VG+ Sbjct: 228 VELHEGRKHIVRRMLKEAGFPVQRLVRTKLHTLQLGEMKPGILRALNSNELASLYKAVGM 287 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.322 0.141 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 1,613,509,026 Number of extensions: 61975363 Number of successful extensions: 153976 Number of sequences better than 10.0: 5599 Number of HSP's gapped: 147771 Number of HSP's successfully gapped: 5737 Length of query: 257 Length of database: 3,808,957,724 Length adjustment: 134 Effective length of query: 123 Effective length of database: 2,314,413,648 Effective search space: 284672878704 Effective search space used: 284672878704 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 79 (35.0 bits)