BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML1611c (240 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|O33022|RNH2_MYCLE Tax_Id=1769 (rnhB)RecName: Full=Ribonucleas... 456 e-126 sp|B8ZRW3|RNH2_MYCLB Tax_Id=561304 (rnhB)RecName: Full=Ribonucle... 456 e-126 sp|A0PQ70|RNH2_MYCUA Tax_Id=362242 (rnhB)RecName: Full=Ribonucle... 344 4e-93 sp|B2HJL9|RNH2_MYCMM Tax_Id=216594 (rnhB)RecName: Full=Ribonucle... 344 4e-93 sp|Q7TXM7|RNH2_MYCBO Tax_Id=1765 (rnhB)RecName: Full=Ribonucleas... 343 1e-92 sp|Q10793|RNH2_MYCTU Tax_Id=1773 (rnhB)RecName: Full=Ribonucleas... 340 1e-91 sp|A5U6Q7|RNH2_MYCTA Tax_Id=419947 (rnhB)RecName: Full=Ribonucle... 340 1e-91 sp|C1AG17|RNH2_MYCBT Tax_Id=561275 (rnhB)RecName: Full=Ribonucle... 340 1e-91 sp|A1KMP6|RNH2_MYCBP Tax_Id=410289 (rnhB)RecName: Full=Ribonucle... 340 1e-91 tr|C6DWT7|C6DWT7_MYCTK Tax_Id=478434 RecName: Full=Ribonuclease;... 340 1e-91 tr|A5WRF4|A5WRF4_MYCTF Tax_Id=336982 RecName: Full=Ribonuclease;... 340 1e-91 tr|A4KKG5|A4KKG5_MYCTU Tax_Id=395095 RecName: Full=Ribonuclease;... 340 1e-91 tr|A2VLN2|A2VLN2_MYCTU Tax_Id=348776 RecName: Full=Ribonuclease;... 337 9e-91 sp|Q73VP3|RNH2_MYCPA Tax_Id=1770 (rnhB)RecName: Full=Ribonucleas... 325 2e-87 sp|Q1BAK3|RNH2_MYCSS Tax_Id=164756 (rnhB)RecName: Full=Ribonucle... 315 3e-84 sp|A1UEF9|RNH2_MYCSK Tax_Id=189918 (rnhB)RecName: Full=Ribonucle... 315 3e-84 sp|A3PXW3|RNH2_MYCSJ Tax_Id=164757 (rnhB)RecName: Full=Ribonucle... 315 4e-84 sp|A0QJ41|RNH2_MYCA1 Tax_Id=243243 (rnhB)RecName: Full=Ribonucle... 309 1e-82 sp|A1T759|RNH2_MYCVP Tax_Id=350058 (rnhB)RecName: Full=Ribonucle... 306 1e-81 sp|A4TE84|RNH2_MYCGI Tax_Id=350054 (rnhB)RecName: Full=Ribonucle... 303 1e-80 sp|A0QV44|RNH2_MYCS2 Tax_Id=246196 (rnhB)RecName: Full=Ribonucle... 301 4e-80 sp|B1MDH9|RNH2_MYCA9 Tax_Id=561007 (rnhB)RecName: Full=Ribonucle... 275 3e-72 sp|Q0S2B9|RNH2_RHOSR Tax_Id=101510 (rnhB)RecName: Full=Ribonucle... 259 1e-67 sp|C1B2S6|RNH2_RHOOB Tax_Id=632772 (rnhB)RecName: Full=Ribonucle... 256 1e-66 sp|Q5YS47|RNH2_NOCFA Tax_Id=37329 (rnhB)RecName: Full=Ribonuclea... 250 8e-65 sp|C0ZXT2|RNH2_RHOE4 Tax_Id=234621 (rnhB)RecName: Full=Ribonucle... 248 4e-64 tr|C3JLV0|C3JLV0_RHOER Tax_Id=596309 (rnhB)RecName: Full=Ribonuc... 245 3e-63 tr|D0LAN1|D0LAN1_9ACTO Tax_Id=526226 SubName: Full=Ribonuclease ... 229 2e-58 tr|C2ANP4|C2ANP4_TSUPA Tax_Id=521096 RecName: Full=Ribonuclease;... 220 9e-56 tr|C2AAF1|C2AAF1_THECU Tax_Id=471852 RecName: Full=Ribonuclease;... 216 2e-54 tr|C7MY90|C7MY90_SACVD Tax_Id=471857 RecName: Full=Ribonuclease;... 216 2e-54 sp|A4X4I2|RNH2_SALTO Tax_Id=369723 (rnhB)RecName: Full=Ribonucle... 212 3e-53 sp|A8M684|RNH2_SALAI Tax_Id=391037 (rnhB)RecName: Full=Ribonucle... 211 7e-53 sp|A4FME5|RNH2_SACEN Tax_Id=405948 (rnhB)RecName: Full=Ribonucle... 210 1e-52 tr|C4RC89|C4RC89_9ACTO Tax_Id=219305 RecName: Full=Ribonuclease;... 207 6e-52 tr|C6RAM2|C6RAM2_9CORY Tax_Id=553206 (rnhB)RecName: Full=Ribonuc... 207 1e-51 tr|C2BNT8|C2BNT8_9CORY Tax_Id=525264 (rnhB)RecName: Full=Ribonuc... 206 1e-51 sp|Q0RDP7|RNH2_FRAAA Tax_Id=326424 (rnhB)RecName: Full=Ribonucle... 206 2e-51 sp|A0LV66|RNH2_ACIC1 Tax_Id=351607 (rnhB)RecName: Full=Ribonucle... 206 2e-51 tr|C2GKT9|C2GKT9_9CORY Tax_Id=548478 (rnhB)RecName: Full=Ribonuc... 204 7e-51 tr|C0VVB9|C0VVB9_9CORY Tax_Id=548477 (rnhB)RecName: Full=Ribonuc... 204 7e-51 tr|C0WKI7|C0WKI7_9CORY Tax_Id=525260 (rnhB)RecName: Full=Ribonuc... 199 2e-49 tr|C2CNT2|C2CNT2_CORST Tax_Id=525268 (rnhB)RecName: Full=Ribonuc... 198 4e-49 sp|A1SLS0|RNH2_NOCSJ Tax_Id=196162 (rnhB)RecName: Full=Ribonucle... 198 5e-49 tr|C0XSA3|C0XSA3_9CORY Tax_Id=525263 (rnhB)RecName: Full=Ribonuc... 198 5e-49 sp|Q2J702|RNH2_FRASC Tax_Id=106370 (rnhB)RecName: Full=Ribonucle... 197 8e-49 tr|C6WEV2|C6WEV2_ACTMD Tax_Id=446462 RecName: Full=Ribonuclease;... 196 2e-48 tr|C1WPU5|C1WPU5_9ACTO Tax_Id=479435 RecName: Full=Ribonuclease;... 194 5e-48 sp|A8L6C6|RNH2_FRASN Tax_Id=298653 (rnhB)RecName: Full=Ribonucle... 193 1e-47 sp|Q8NNZ4|RNH2_CORGL Tax_Id=1718 (rnhB)RecName: Full=Ribonucleas... 192 3e-47 >sp|O33022|RNH2_MYCLE Tax_Id=1769 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium leprae] Length = 240 Score = 456 bits (1172), Expect = e-126 Identities = 226/240 (94%), Positives = 226/240 (94%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEESLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 RLEESLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG Sbjct: 61 RLEESLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 LSVRPGYVLSDGFR DAVVACIAAASVLAKVSRDRLMVAMDADYPGY Sbjct: 121 LSVRPGYVLSDGFRVPGLSVPSLPVVGGDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGECR 240 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGECR Sbjct: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGECR 240 >sp|B8ZRW3|RNH2_MYCLB Tax_Id=561304 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium leprae] Length = 240 Score = 456 bits (1172), Expect = e-126 Identities = 226/240 (94%), Positives = 226/240 (94%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEESLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 RLEESLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG Sbjct: 61 RLEESLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 LSVRPGYVLSDGFR DAVVACIAAASVLAKVSRDRLMVAMDADYPGY Sbjct: 121 LSVRPGYVLSDGFRVPGLSVPSLPVVGGDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGECR 240 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGECR Sbjct: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGECR 240 >sp|A0PQ70|RNH2_MYCUA Tax_Id=362242 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium ulcerans] Length = 239 Score = 344 bits (883), Expect = 4e-93 Identities = 182/237 (76%), Positives = 187/237 (78%), Gaps = 5/237 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 MATTWPP +IRKS GLR TLE LQRSGLGPVAGVDEVGRGACAGPLVVAAC LGP Sbjct: 1 MATTWPPRTVIRKSSGLR---TLESALQRSGLGPVAGVDEVGRGACAGPLVVAACALGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R E +LDDSKKL+ K RE LFPLICRYALAYHVVFIPSVEVDR GV VANIEGMRRAV Sbjct: 58 RYESLAALDDSKKLTEKTREKLFPLICRYALAYHVVFIPSVEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLSVRPGYVLSDGFR DA ACIAAASVLAKVSRDRLMVAMD YP Sbjct: 118 AGLSVRPGYVLSDGFRVPGLSVPSLPVIGGDAAAACIAAASVLAKVSRDRLMVAMDTQYP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAE 235 GYGFA HKGY TRAH+LALTQLGPCPEHR SFINVRR+ TRSN A A PP E Sbjct: 178 GYGFAEHKGYSTRAHTLALTQLGPCPEHRRSFINVRRVATRSNGAATAEREADPPQE 234 >sp|B2HJL9|RNH2_MYCMM Tax_Id=216594 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium marinum] Length = 239 Score = 344 bits (883), Expect = 4e-93 Identities = 182/237 (76%), Positives = 187/237 (78%), Gaps = 5/237 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 MATTWPP +IRKS GLR TLE LQRSGLGPVAGVDEVGRGACAGPLVVAAC LGP Sbjct: 1 MATTWPPRTVIRKSSGLR---TLESALQRSGLGPVAGVDEVGRGACAGPLVVAACALGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R E +LDDSKKL+ K RE LFPLICRYALAYHVVFIPSVEVDR GV VANIEGMRRAV Sbjct: 58 RYESLAALDDSKKLTEKTREKLFPLICRYALAYHVVFIPSVEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLSVRPGYVLSDGFR DA ACIAAASVLAKVSRDRLMVAMD YP Sbjct: 118 AGLSVRPGYVLSDGFRVPGLSVPSLPVIGGDAAAACIAAASVLAKVSRDRLMVAMDTQYP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAE 235 GYGFA HKGY TRAH+LALTQLGPCPEHR SFINVRR+ TRSN A A PP E Sbjct: 178 GYGFAEHKGYSTRAHTLALTQLGPCPEHRRSFINVRRVATRSNGAAAAEREADPPQE 234 >sp|Q7TXM7|RNH2_MYCBO Tax_Id=1765 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium bovis] Length = 264 Score = 343 bits (879), Expect = 1e-92 Identities = 178/245 (72%), Positives = 192/245 (78%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDRHGV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRHGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >sp|Q10793|RNH2_MYCTU Tax_Id=1773 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium tuberculosis] Length = 264 Score = 340 bits (871), Expect = 1e-91 Identities = 177/245 (72%), Positives = 191/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >sp|A5U6Q7|RNH2_MYCTA Tax_Id=419947 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium tuberculosis] Length = 264 Score = 340 bits (871), Expect = 1e-91 Identities = 177/245 (72%), Positives = 191/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >sp|C1AG17|RNH2_MYCBT Tax_Id=561275 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium bovis] Length = 264 Score = 340 bits (871), Expect = 1e-91 Identities = 177/245 (72%), Positives = 191/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >sp|A1KMP6|RNH2_MYCBP Tax_Id=410289 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium bovis] Length = 264 Score = 340 bits (871), Expect = 1e-91 Identities = 177/245 (72%), Positives = 191/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >tr|C6DWT7|C6DWT7_MYCTK Tax_Id=478434 RecName: Full=Ribonuclease; EC=3.1.26.-;[Mycobacterium tuberculosis] Length = 264 Score = 340 bits (871), Expect = 1e-91 Identities = 177/245 (72%), Positives = 191/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >tr|A5WRF4|A5WRF4_MYCTF Tax_Id=336982 RecName: Full=Ribonuclease; EC=3.1.26.-;[Mycobacterium tuberculosis] Length = 264 Score = 340 bits (871), Expect = 1e-91 Identities = 177/245 (72%), Positives = 191/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >tr|A4KKG5|A4KKG5_MYCTU Tax_Id=395095 RecName: Full=Ribonuclease; EC=3.1.26.-;[Mycobacterium tuberculosis str. Haarlem] Length = 264 Score = 340 bits (871), Expect = 1e-91 Identities = 177/245 (72%), Positives = 191/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LFPLICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >tr|A2VLN2|A2VLN2_MYCTU Tax_Id=348776 RecName: Full=Ribonuclease; EC=3.1.26.-;[Mycobacterium tuberculosis C] Length = 264 Score = 337 bits (863), Expect = 9e-91 Identities = 176/245 (71%), Positives = 190/245 (77%), Gaps = 5/245 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M TWPP +IRKSGGLRGM TLE L R GLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MTKTWPPRTVIRKSGGLRGMRTLESALHRGGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 R+ +LDDSKKLS + RE LF LICRYA+AYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 61 RIASLAALDDSKKLSEQAREKLFSLICRYAVAYHVVFIPSAEVDRRGVHVANIEGMRRAV 120 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDR+MVA+DAD+P Sbjct: 121 AGLAVRPGYVLSDGFRVPGLPMPSLPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAP---PAE 235 GYGFA HKGY T AHS AL +LGPCP+HRYSFINVRR+ + SNT VA P P A+ Sbjct: 181 GYGFAEHKGYSTPAHSRALARLGPCPQHRYSFINVRRVASGSNTAEVADGQPDPRDGTAQ 240 Query: 236 HGECR 240 GE R Sbjct: 241 TGEGR 245 >sp|Q73VP3|RNH2_MYCPA Tax_Id=1770 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium paratuberculosis] Length = 239 Score = 325 bits (834), Expect = 2e-87 Identities = 173/242 (71%), Positives = 186/242 (76%), Gaps = 5/242 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 MATTWPP +IRKS GLR TLE L RSGLGPVAGVDEVGRGACAGPLVVAACVLGPG Sbjct: 1 MATTWPPRTVIRKSSGLR---TLESALYRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 +LE +LDDSKKL+ RE LFP+I RYALAYHVVFIP EVDR GV VANIEGMRRAV Sbjct: 58 KLESLAALDDSKKLTESVRERLFPVIRRYALAYHVVFIPPAEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLS+RPGYVLSDGFR DAV ACIAAASVLAKVSRDRLMVAMDA++P Sbjct: 118 AGLSLRPGYVLSDGFRVPGLAVPSLPVIGGDAVAACIAAASVLAKVSRDRLMVAMDAEHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGE 238 GYGFA HKGY T AHS AL +LGPCP+HR+SFINVRR+ S R VA P P + E Sbjct: 178 GYGFADHKGYSTPAHSAALARLGPCPQHRHSFINVRRVANGSGGRVVADCKPDLPLQRDE 237 Query: 239 CR 240 R Sbjct: 238 GR 239 >sp|Q1BAK3|RNH2_MYCSS Tax_Id=164756 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium sp.] Length = 239 Score = 315 bits (807), Expect = 3e-84 Identities = 167/241 (69%), Positives = 182/241 (75%), Gaps = 8/241 (3%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M +WPP +IRK+ GLR TLE L R+GLGPVAGVDEVGRGACAGPLVVAACVLGP Sbjct: 1 MPASWPPRTVIRKASGLR---TLESALYRNGLGPVAGVDEVGRGACAGPLVVAACVLGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 RLE +LDDSKKL K RE LFP+I RYALAYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 58 RLESLAALDDSKKLGEKERERLFPVIRRYALAYHVVFIPSEEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLSVRPGYVLSDGFR DA ACIAAASVLAKVSRDRLMVAM+ ++P Sbjct: 118 AGLSVRPGYVLSDGFRVPGLPMPSLPVVGGDAAAACIAAASVLAKVSRDRLMVAMEREHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGE 238 GYGFA HKGY T AH+ AL +LGPC +HRYSFINVRR+VT + G T A P G+ Sbjct: 178 GYGFAEHKGYSTPAHTAALAELGPCAQHRYSFINVRRLVTAGTPQISGGLTDAEP---GQ 234 Query: 239 C 239 C Sbjct: 235 C 235 >sp|A1UEF9|RNH2_MYCSK Tax_Id=189918 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium sp.] Length = 239 Score = 315 bits (807), Expect = 3e-84 Identities = 167/241 (69%), Positives = 182/241 (75%), Gaps = 8/241 (3%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M +WPP +IRK+ GLR TLE L R+GLGPVAGVDEVGRGACAGPLVVAACVLGP Sbjct: 1 MPASWPPRTVIRKASGLR---TLESALYRNGLGPVAGVDEVGRGACAGPLVVAACVLGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 RLE +LDDSKKL K RE LFP+I RYALAYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 58 RLESLAALDDSKKLGEKERERLFPVIRRYALAYHVVFIPSEEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLSVRPGYVLSDGFR DA ACIAAASVLAKVSRDRLMVAM+ ++P Sbjct: 118 AGLSVRPGYVLSDGFRVPGLPMPSLPVVGGDAAAACIAAASVLAKVSRDRLMVAMEREHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGE 238 GYGFA HKGY T AH+ AL +LGPC +HRYSFINVRR+VT + G T A P G+ Sbjct: 178 GYGFAEHKGYSTPAHTAALAELGPCAQHRYSFINVRRLVTAGTPQISGGLTDAEP---GQ 234 Query: 239 C 239 C Sbjct: 235 C 235 >sp|A3PXW3|RNH2_MYCSJ Tax_Id=164757 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium sp.] Length = 239 Score = 315 bits (806), Expect = 4e-84 Identities = 167/241 (69%), Positives = 182/241 (75%), Gaps = 8/241 (3%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M +WPP +IRK+ GLR TLE L R+GLGPVAGVDEVGRGACAGPLVVAACVLGP Sbjct: 1 MPASWPPRTVIRKASGLR---TLESALYRNGLGPVAGVDEVGRGACAGPLVVAACVLGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 RLE +LDDSKKL K RE LFP+I RYALAYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 58 RLESLAALDDSKKLGEKERERLFPVIRRYALAYHVVFIPSGEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLSVRPGYVLSDGFR DA ACIAAASVLAKVSRDRLMVAM+ ++P Sbjct: 118 AGLSVRPGYVLSDGFRVPGLPMPSLPVVGGDAAAACIAAASVLAKVSRDRLMVAMEREHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGE 238 GYGFA HKGY T AH+ AL +LGPC +HRYSFINVRR+VT + G T A P G+ Sbjct: 178 GYGFAEHKGYSTPAHTAALAELGPCAQHRYSFINVRRLVTAGTPQISGGLTDAEP---GQ 234 Query: 239 C 239 C Sbjct: 235 C 235 >sp|A0QJ41|RNH2_MYCA1 Tax_Id=243243 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium avium] Length = 230 Score = 309 bits (792), Expect = 1e-82 Identities = 166/233 (71%), Positives = 179/233 (76%), Gaps = 5/233 (2%) Query: 10 IIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLD 67 +IRKS GLR TLE L RSGLGPVAGVDEVGRGACAGPLVVAACVLGPG+LE +LD Sbjct: 1 MIRKSSGLR---TLESALYRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGKLESLAALD 57 Query: 68 DSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGY 127 DSKKL+ RE LFP+I RYALAYHVVFIP EVDR GV VANIEGMRRAVAGLS+RPGY Sbjct: 58 DSKKLTESVRERLFPVIRRYALAYHVVFIPPAEVDRRGVHVANIEGMRRAVAGLSLRPGY 117 Query: 128 VLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKG 187 VLSDGFR DAV ACIAAASVLAKVSRDRLMVAMDA++PGYGFA HKG Sbjct: 118 VLSDGFRVPGLAVPSLPVIGGDAVAACIAAASVLAKVSRDRLMVAMDAEHPGYGFADHKG 177 Query: 188 YCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGECR 240 Y T AHS AL +LGPCP+HR+SFINVRR+ S R VA P P + E R Sbjct: 178 YSTPAHSAALARLGPCPQHRHSFINVRRVANGSGGRVVADCKPDLPLQRDEGR 230 >sp|A1T759|RNH2_MYCVP Tax_Id=350058 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium vanbaalenii] Length = 249 Score = 306 bits (784), Expect = 1e-81 Identities = 166/240 (69%), Positives = 177/240 (73%), Gaps = 16/240 (6%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M WPP +IRKS GLR TLE L R+GLGPVAGVDEVGRGACAGPLVVAACVLGP Sbjct: 1 MPAAWPPRTVIRKSSGLR---TLESALYRAGLGPVAGVDEVGRGACAGPLVVAACVLGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 RLE +LDDSKKL+ RE LFPLI RYALAYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 58 RLESLAALDDSKKLNENERERLFPLIRRYALAYHVVFIPSQEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLS+RPGYVLSDGFR DA ACIAAASVLAKVSRDRLMVAM+ ++P Sbjct: 118 AGLSLRPGYVLSDGFRVPGLPMPSLPVVGGDAAAACIAAASVLAKVSRDRLMVAMEDEHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGE 238 GYGFA HKGY TRAHS AL +LGP +HRYSFINVRR+V P EHGE Sbjct: 178 GYGFAEHKGYSTRAHSAALARLGPSSQHRYSFINVRRLV-----------MDGEPEEHGE 226 >sp|A4TE84|RNH2_MYCGI Tax_Id=350054 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium gilvum] Length = 253 Score = 303 bits (776), Expect = 1e-80 Identities = 159/219 (72%), Positives = 172/219 (78%), Gaps = 5/219 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M WPP +IRKS GLR TLE L R+GLGPVAGVDEVGRGACAGPLVVAAC+LGP Sbjct: 1 MPAVWPPRTVIRKSSGLR---TLESALYRAGLGPVAGVDEVGRGACAGPLVVAACILGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 RLE +LDDSKKL+ RE LFPLI RYA+A+HVVFIPSVEVDR GV VANIEGMRRAV Sbjct: 58 RLESLSALDDSKKLNESERERLFPLIRRYAVAFHVVFIPSVEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL+VRPGYVLSDGFR DA ACIAAASVLAKVSRDRLMVAMD ++P Sbjct: 118 AGLAVRPGYVLSDGFRVPGLPMPSLPVVGGDAAAACIAAASVLAKVSRDRLMVAMDQEHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIV 217 GYGFA HKGY TRAHS AL LGP +HR+SFINVRR+V Sbjct: 178 GYGFADHKGYSTRAHSAALNDLGPSTQHRFSFINVRRLV 216 >sp|A0QV44|RNH2_MYCS2 Tax_Id=246196 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium smegmatis] Length = 272 Score = 301 bits (771), Expect = 4e-80 Identities = 160/225 (71%), Positives = 171/225 (76%), Gaps = 5/225 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M +WPP +IRKS GLR TLE L R+GLGPVAGVDEVGRGACAGPLVVAACVLGP Sbjct: 1 MPGSWPPRTVIRKSSGLR---TLESALYRNGLGPVAGVDEVGRGACAGPLVVAACVLGPN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 RLE +LDDSKKL K RE LFPLI RYALAYHVVFIPS EVDR GV VANIEGMRRAV Sbjct: 58 RLESLAALDDSKKLGEKERERLFPLIRRYALAYHVVFIPSHEVDRRGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGLSVRPGYVLSDGFR DA ACIAAASVLAKVSRDRLMV M+ +P Sbjct: 118 AGLSVRPGYVLSDGFRVPGLSVPSLPVIGGDAAAACIAAASVLAKVSRDRLMVEMEEQHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTR 223 GYGFA HKGY T AH+ ALT+ GPC EHRYS++NVRR + R Sbjct: 178 GYGFAEHKGYITPAHTAALTRHGPCVEHRYSYVNVRRAAEATGVR 222 >sp|B1MDH9|RNH2_MYCA9 Tax_Id=561007 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Mycobacterium abscessus] Length = 234 Score = 275 bits (703), Expect = 3e-72 Identities = 144/223 (64%), Positives = 166/223 (74%), Gaps = 5/223 (2%) Query: 1 MATTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG 60 M+T+WPP +IRK+ GLR TLE L R GLGPVAGVDE GRGACAGPLV+AACVLG Sbjct: 1 MSTSWPPRTVIRKASGLR---TLELTLDRVGLGPVAGVDEAGRGACAGPLVIAACVLGSN 57 Query: 61 RLEE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAV 118 + + +L+DSKKL+ K RE LFPLICRYA AYHVV +P+ EVDR GV VANIEGMRRAV Sbjct: 58 QRKSLAALNDSKKLTEKMRETLFPLICRYAEAYHVVSVPADEVDRIGVHVANIEGMRRAV 117 Query: 119 AGLSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYP 178 AGL V+PGYVL+DGFR DA ACIAAASVLAKVSRDR+MV MD+D+P Sbjct: 118 AGLGVKPGYVLTDGFRVPGLPVPSLPVIGGDASAACIAAASVLAKVSRDRVMVNMDSDHP 177 Query: 179 GYGFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSN 221 GYGFA HKGY T H+ AL +LGP +HR SF+NVR S+ Sbjct: 178 GYGFAVHKGYSTAVHTEALRRLGPSAQHRQSFVNVRNAAMGSS 220 >sp|Q0S2B9|RNH2_RHOSR Tax_Id=101510 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Rhodococcus sp.] Length = 226 Score = 259 bits (663), Expect = 1e-67 Identities = 141/219 (64%), Positives = 157/219 (71%), Gaps = 5/219 (2%) Query: 3 TTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRL 62 T+WPP +IR+S GLR T+E L RSGLGPVAGVDE GRGACAGPLVVAACVL P Sbjct: 2 TSWPPRIVIRRSSGLR---TMESALVRSGLGPVAGVDEAGRGACAGPLVVAACVLAPKPY 58 Query: 63 EE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 LDDSKKL+ + RE LFP I R A+A+ VV P+ EVDR GV VANIEGMRRAVAG Sbjct: 59 PALARLDDSKKLTERTREELFPAITRLAVAWSVVSFPAEEVDRMGVHVANIEGMRRAVAG 118 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 LS PGYVL+DGFR DA ACIAAASVLAKVSRDR+MVAMD +PGY Sbjct: 119 LSTTPGYVLTDGFRVPGLPAPSLPVIGGDAAAACIAAASVLAKVSRDRVMVAMDETHPGY 178 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTR 219 GFA HKGY T AH AL +LGPCPEHR S+ NV ++ R Sbjct: 179 GFAIHKGYNTPAHLTALEKLGPCPEHRRSWSNVAALIHR 217 >sp|C1B2S6|RNH2_RHOOB Tax_Id=632772 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Rhodococcus opacus] Length = 226 Score = 256 bits (654), Expect = 1e-66 Identities = 140/219 (63%), Positives = 156/219 (71%), Gaps = 5/219 (2%) Query: 3 TTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRL 62 T+WPP +IR+S GLR T+E L RSGLGPVAGVDE GRGACAGPLVVAACVL P Sbjct: 2 TSWPPRIVIRRSSGLR---TMESALVRSGLGPVAGVDEAGRGACAGPLVVAACVLAPKPY 58 Query: 63 EE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 LDDSKKL+ + RE LFP I R A+A+ VV P+ EVDR GV VANIEGMRRAVAG Sbjct: 59 PALARLDDSKKLTERTREELFPAITRLAVAWSVVSFPADEVDRMGVHVANIEGMRRAVAG 118 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 L+ PGYVL+DGFR DA ACIAAASVLAKVSRDR+MVAMD +PGY Sbjct: 119 LTTTPGYVLTDGFRVPGLPAPSLPVIGGDAAAACIAAASVLAKVSRDRVMVAMDETHPGY 178 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTR 219 GFA HKGY T AH AL LGPCPEHR S+ NV ++ R Sbjct: 179 GFAIHKGYNTPAHLAALEVLGPCPEHRRSWSNVAALLHR 217 >sp|Q5YS47|RNH2_NOCFA Tax_Id=37329 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Nocardia farcinica] Length = 251 Score = 250 bits (639), Expect = 8e-65 Identities = 132/214 (61%), Positives = 154/214 (71%), Gaps = 5/214 (2%) Query: 3 TTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRL 62 T WPP ++RK+GGLR TLE L R GLGPVAGVDE GRG CAGPLVVAAC+L P Sbjct: 5 TGWPPRMVMRKAGGLR---TLEAALIRGGLGPVAGVDEAGRGPCAGPLVVAACLLAPKAY 61 Query: 63 EE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 + LDDSKKL+ RE L+P+I R ALA+ VV IP+ E+D G+ VANIEGMRRAVAG Sbjct: 62 DRLAGLDDSKKLTEAAREELYPVITRLALAWEVVVIPAWEIDAIGIHVANIEGMRRAVAG 121 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 L RPGYVL+DGFR DA ACIAAAS+LAKV+RDR+MV +D+ +PGY Sbjct: 122 LRQRPGYVLTDGFRVPGLAAPSLPVIGGDAAAACIAAASILAKVTRDRIMVELDSRHPGY 181 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVR 214 GFAAHKGY T H+ AL +LGPC EHR S+ NVR Sbjct: 182 GFAAHKGYNTPEHTAALQRLGPCSEHRRSWRNVR 215 >sp|C0ZXT2|RNH2_RHOE4 Tax_Id=234621 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Rhodococcus erythropolis] Length = 226 Score = 248 bits (633), Expect = 4e-64 Identities = 132/224 (58%), Positives = 154/224 (68%), Gaps = 5/224 (2%) Query: 3 TTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRL 62 ++WPP +IR+S GLR T+E L R+GLGPVAGVDE GRGACAGPLV+AACVL P Sbjct: 2 SSWPPRVVIRRSAGLR---TMESALARTGLGPVAGVDEAGRGACAGPLVIAACVLAPKPQ 58 Query: 63 EE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 LDDSKKL+ + RE LFP I R ALA+ VV +P+ EVD+ G+ VANIEGMRRAVAG Sbjct: 59 AALARLDDSKKLTERAREELFPAIKRLALAWSVVSVPAAEVDQIGIHVANIEGMRRAVAG 118 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 L + PGYVL+DGFR D ACIAAASVLAKV+RDR+M MD +PGY Sbjct: 119 LDLEPGYVLTDGFRVPGLTAPSLPVIGGDGAAACIAAASVLAKVTRDRVMTEMDETHPGY 178 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRA 224 GFA HKGY T H AL +LGPCPEHR ++ NV R RA Sbjct: 179 GFAIHKGYSTPLHMDALDELGPCPEHRMTYANVVAAGVRLEQRA 222 >tr|C3JLV0|C3JLV0_RHOER Tax_Id=596309 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Rhodococcus erythropolis SK121] Length = 226 Score = 245 bits (625), Expect = 3e-63 Identities = 130/224 (58%), Positives = 153/224 (68%), Gaps = 5/224 (2%) Query: 3 TTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRL 62 ++WPP +IR+S GLR T+E L R+GLGPVAGVDE GRGACAGPLV+AACVL P Sbjct: 2 SSWPPRVVIRRSAGLR---TMESALARTGLGPVAGVDEAGRGACAGPLVIAACVLAPKPQ 58 Query: 63 EE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 LDDSKKL+ + RE LFP I R ALA+ V+ +P+ EVD+ G+ VANIEGMRRAVA Sbjct: 59 AALARLDDSKKLTERAREELFPAIKRLALAWSVISVPAAEVDQIGIHVANIEGMRRAVAS 118 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 L + PGYVL+DGFR D ACIAAASVLAKV+RDR+M MD +PGY Sbjct: 119 LDLEPGYVLTDGFRVPGLTAPSLPVIGGDGAAACIAAASVLAKVTRDRVMTEMDDTHPGY 178 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRA 224 GFA HKGY T H AL +LGPCPEHR ++ NV R RA Sbjct: 179 GFAIHKGYSTPLHMDALDELGPCPEHRMTYANVVAAGVRLEQRA 222 >tr|D0LAN1|D0LAN1_9ACTO Tax_Id=526226 SubName: Full=Ribonuclease H; EC=3.1.26.4;[Gordonia bronchialis DSM 43247] Length = 228 Score = 229 bits (584), Expect = 2e-58 Identities = 119/213 (55%), Positives = 144/213 (67%), Gaps = 5/213 (2%) Query: 3 TTWPPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRL 62 T WPP IR++ LR T E+ L R+GLGPVAGVDE GRGACAGPLVVAACVL P +L Sbjct: 2 TRWPPRAPIRRAASLR---TFEFALHRNGLGPVAGVDEAGRGACAGPLVVAACVLKPTQL 58 Query: 63 EE--SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAG 120 LDDSK+L+ + RE L+ + RYA ++ V I + E+DR G+ VANIEGMRRAVA Sbjct: 59 TSLADLDDSKRLTERTRETLYRAVTRYAHSWSAVIIDAAEIDRIGIHVANIEGMRRAVAA 118 Query: 121 LSVRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGY 180 L V PGYVLSDGF+ D ACIAAAS++AKV+RDR+MVAMD ++PGY Sbjct: 119 LDVTPGYVLSDGFKVPGLTAPSLPVIGGDGAAACIAAASIIAKVTRDRIMVAMDDEHPGY 178 Query: 181 GFAAHKGYCTRAHSLALTQLGPCPEHRYSFINV 213 FA HKGY T H + GP P+HR S+ NV Sbjct: 179 DFAVHKGYSTAHHMSRIDTAGPSPQHRMSYRNV 211 >tr|C2ANP4|C2ANP4_TSUPA Tax_Id=521096 RecName: Full=Ribonuclease; EC=3.1.26.-;[Tsukamurella paurometabola DSM 20162] Length = 219 Score = 220 bits (561), Expect = 9e-56 Identities = 120/220 (54%), Positives = 147/220 (66%), Gaps = 7/220 (3%) Query: 10 IIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEESL--- 66 ++R S GL T+E L R+GLGPVAG+DE GRGACAGP+ VAAC+L P ++ SL Sbjct: 1 MVRSSSGLS---TMESVLGRAGLGPVAGIDEAGRGACAGPMTVAACIL-PRKIPPSLARL 56 Query: 67 DDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPG 126 DDSKKLS RE L+P I ++A+++ VV IP+ EVDR GV VANI GMRRA+A L V PG Sbjct: 57 DDSKKLSEIARERLYPEILKHAVSWSVVTIPAAEVDRLGVHVANISGMRRAIATLQVTPG 116 Query: 127 YVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHK 186 YVL DGF DA +CIAAASVLAKV+RDR+M +DADY GYGFA HK Sbjct: 117 YVLIDGFTVPGLGIPSLPVIGGDASASCIAAASVLAKVTRDRVMAELDADYDGYGFAVHK 176 Query: 187 GYCTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVA 226 GY T AH AL +LGP +HR + NVR + ++ A Sbjct: 177 GYSTAAHMAALGELGPSDQHRMRYQNVRAALRATSNEGTA 216 >tr|C2AAF1|C2AAF1_THECU Tax_Id=471852 RecName: Full=Ribonuclease; EC=3.1.26.-;[Thermomonospora curvata DSM 43183] Length = 233 Score = 216 bits (550), Expect = 2e-54 Identities = 116/211 (54%), Positives = 138/211 (65%), Gaps = 2/211 (0%) Query: 19 GMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGR--LEESLDDSKKLSAKG 76 G++ LE LQ +G PVAGVDE GRGACAGPLVVAA +L GR L + L DSK L+A+ Sbjct: 15 GLYGLERALQHAGFSPVAGVDEAGRGACAGPLVVAAVILPSGRRALIDGLTDSKLLTARR 74 Query: 77 REMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXX 136 RE L+ I A+A+ V IP ++DR G+ NI GMRRA+A L VRPGYVLSDGFR Sbjct: 75 REELYAQIVERAVAWATVIIPRHDIDRLGLHQCNITGMRRALAQLEVRPGYVLSDGFRVP 134 Query: 137 XXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLA 196 D V AC+AAASV+AKV+RDRLMV + YP YGFA HKGY TR H+ A Sbjct: 135 GLDVPGLAVPKGDCVAACVAAASVVAKVTRDRLMVELHERYPQYGFAVHKGYVTREHTAA 194 Query: 197 LTQLGPCPEHRYSFINVRRIVTRSNTRAVAG 227 L+ GPCPEHR SF+NV R+ V G Sbjct: 195 LSAHGPCPEHRLSFVNVARVGNNGARTGVFG 225 >tr|C7MY90|C7MY90_SACVD Tax_Id=471857 RecName: Full=Ribonuclease; EC=3.1.26.-;[Saccharomonospora viridis] Length = 275 Score = 216 bits (549), Expect = 2e-54 Identities = 120/211 (56%), Positives = 137/211 (64%), Gaps = 8/211 (3%) Query: 6 PPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG---RL 62 PP +IR G + W L+ L R GLGPV GVDE GRGACAGPLVVAACVL PG +L Sbjct: 6 PPRAVIR--GDIS--WALQAALDRRGLGPVVGVDEAGRGACAGPLVVAACVLRPGDGAKL 61 Query: 63 EESLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLS 122 E L DSK L+ R+ ++ I R AL Y +V IP E+D GV ANIEGMRRAVA LS Sbjct: 62 PE-LADSKSLTPLARDRVYERILRRALDYSIVVIPPAEIDVQGVHTANIEGMRRAVAALS 120 Query: 123 VRPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGF 182 RPGYVL DGFR D VAC+AAASVLAKV+RDR+MV + A+YP YGF Sbjct: 121 QRPGYVLLDGFRVPGLPAPSVPVLKGDRAVACVAAASVLAKVTRDRIMVGLHAEYPVYGF 180 Query: 183 AAHKGYCTRAHSLALTQLGPCPEHRYSFINV 213 HKGY T H AL + GPC HR+SF NV Sbjct: 181 EVHKGYTTVEHRTALAEHGPCEAHRWSFANV 211 >sp|A4X4I2|RNH2_SALTO Tax_Id=369723 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Salinispora tropica] Length = 270 Score = 212 bits (539), Expect = 3e-53 Identities = 112/216 (51%), Positives = 138/216 (63%), Gaps = 5/216 (2%) Query: 6 PPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE- 64 PP ++R+ GGL + LE LQR G VAG DE GRGACAGPLV AA +L PGR E Sbjct: 4 PPRTVVRRDGGL---YALERALQRRGFRQVAGADEAGRGACAGPLVAAAAILPPGRRGEV 60 Query: 65 -SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSV 123 L DSK L+ RE ++ + A AY VV IP+ EVD G+ V N+ MRRA+A L+ Sbjct: 61 DGLADSKLLTPASRERVYAEVIARASAYAVVVIPAAEVDLRGLHVCNLAAMRRALASLAT 120 Query: 124 RPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFA 183 P YVL+DGF D V AC+AAASVLAKV+RDR+MV +D ++PGYGFA Sbjct: 121 PPEYVLTDGFGVDGLDVPGLAVWKGDRVAACVAAASVLAKVTRDRIMVELDLEFPGYGFA 180 Query: 184 AHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTR 219 HKGY T HS AL + GPCPEHR+S++NV + R Sbjct: 181 EHKGYITAEHSAALRERGPCPEHRFSYVNVATVSGR 216 >sp|A8M684|RNH2_SALAI Tax_Id=391037 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Salinispora arenicola] Length = 269 Score = 211 bits (536), Expect = 7e-53 Identities = 113/216 (52%), Positives = 137/216 (63%), Gaps = 5/216 (2%) Query: 6 PPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE- 64 PP ++R+ GGL + LE LQR G VAG DE GRGACAGPLV AA VL GR E Sbjct: 4 PPRTVVRRDGGL---YALERALQRRGFRHVAGADEAGRGACAGPLVAAAAVLPEGRRGEI 60 Query: 65 -SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSV 123 L DSK L+ RE ++ + ALAY VV IP+ EVD G+ V N+ MRRA+A L+ Sbjct: 61 DGLADSKLLTPASRERVYAEVVARALAYAVVVIPAAEVDLRGLHVCNLAAMRRALASLAT 120 Query: 124 RPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFA 183 P YVL+DGF D V AC+AAASVLAKV+RDR+MV +D +PGYGFA Sbjct: 121 APEYVLTDGFGVDGLDVPGLAVWKGDRVAACVAAASVLAKVTRDRIMVELDTTFPGYGFA 180 Query: 184 AHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIVTR 219 HKGY T HS AL + GPCPEHR+S++NV + R Sbjct: 181 EHKGYITAEHSAALRERGPCPEHRFSYVNVATVSGR 216 >sp|A4FME5|RNH2_SACEN Tax_Id=405948 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Saccharopolyspora erythraea] Length = 228 Score = 210 bits (534), Expect = 1e-52 Identities = 111/193 (57%), Positives = 130/193 (67%), Gaps = 2/193 (1%) Query: 23 LEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG--RLEESLDDSKKLSAKGREML 80 ++ L R GLGPVAGVDE GRGACAGPLVVAAC L PG R E L DSK LS RE L Sbjct: 1 MQSALDRRGLGPVAGVDEAGRGACAGPLVVAACALKPGDGRRFEGLTDSKVLSPAERERL 60 Query: 81 FPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXXXXXX 140 + +I AL+ V+ IP+ EVD G+ VAN+EGMRRAVA LSV PGYVL+DGFR Sbjct: 61 YDVIQAKALSLSVIVIPADEVDALGIHVANLEGMRRAVAQLSVAPGYVLTDGFRVPGLGA 120 Query: 141 XXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLALTQL 200 D V AC+AAASVLAKV+RDR+M + +P YGF HKGYCT H+ LT+ Sbjct: 121 PSVAVVKGDLVAACVAAASVLAKVTRDRIMTGLHEQFPVYGFDEHKGYCTSDHTARLTEH 180 Query: 201 GPCPEHRYSFINV 213 GPC EHR+ + NV Sbjct: 181 GPCEEHRWCYANV 193 >tr|C4RC89|C4RC89_9ACTO Tax_Id=219305 RecName: Full=Ribonuclease; EC=3.1.26.-;[Micromonospora sp. ATCC 39149] Length = 270 Score = 207 bits (528), Expect = 6e-52 Identities = 116/236 (49%), Positives = 142/236 (60%), Gaps = 9/236 (3%) Query: 6 PPCRIIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE- 64 PP ++R+ GL + LE LQR G VAG DE GRGACAGPLV AA VL GR E Sbjct: 4 PPRTVVRREAGL---YALERALQRRGFRHVAGADEAGRGACAGPLVAAAAVLPEGRRGEI 60 Query: 65 -SLDDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSV 123 L DSK L+ RE ++ + ALAY VV IP+ EVD G+ V N+ MRRA+A L+ Sbjct: 61 DGLADSKLLTPASRERVYDQVVASALAYAVVVIPADEVDARGLHVCNLAAMRRALASLTT 120 Query: 124 RPGYVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFA 183 RP YVL+DGF D V AC+AAASVLAKV+RDR+MV +DA +PGYGFA Sbjct: 121 RPDYVLTDGFGVDGLDVPGLAVWKGDRVAACVAAASVLAKVTRDRIMVELDASFPGYGFA 180 Query: 184 AHKGYCTRAHSLALTQLGPCPEHRYSFINVRRIV----TRSNTRAVAGFTPAPPAE 235 HKGY T H+ AL + GPC EHR+S++NV + +R G P P E Sbjct: 181 EHKGYITAEHTAALREHGPCLEHRFSYVNVATVSGLDGRPPRSRRPVGARPVEPME 236 >tr|C6RAM2|C6RAM2_9CORY Tax_Id=553206 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Corynebacterium tuberculostearicum SK141] Length = 213 Score = 207 bits (526), Expect = 1e-51 Identities = 111/205 (54%), Positives = 133/205 (64%), Gaps = 2/205 (0%) Query: 22 TLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDDSKKLSAKGREM 79 T E L ++GLGPVAG DE GRGAC GP+ +AACV+ ++E +L DSKKL+ K RE Sbjct: 9 TYEVALSKAGLGPVAGADEAGRGACCGPITIAACVMPDRPIKELAALTDSKKLTPKQREK 68 Query: 80 LFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXXXXX 139 LFPLI A+ + VV I + ++D+ G+Q ANI GMRRAVA L RPGYVL+D Sbjct: 69 LFPLIKDKAVDWSVVHIGAGDIDKRGIQHANISGMRRAVARLETRPGYVLTDALFIPGLT 128 Query: 140 XXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLALTQ 199 DA CIAAASVLAKVSRD LM +DA YPGYG A+HKGY T+AH A+ Sbjct: 129 QPHLPIIGGDAAARCIAAASVLAKVSRDHLMHELDARYPGYGLASHKGYGTKAHEAAIAA 188 Query: 200 LGPCPEHRYSFINVRRIVTRSNTRA 224 LG CPEHR S+ NVRR RA Sbjct: 189 LGACPEHRMSYENVRRAHAEFAARA 213 >tr|C2BNT8|C2BNT8_9CORY Tax_Id=525264 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Corynebacterium pseudogenitalium ATCC 33035] Length = 213 Score = 206 bits (525), Expect = 1e-51 Identities = 111/205 (54%), Positives = 132/205 (64%), Gaps = 2/205 (0%) Query: 22 TLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDDSKKLSAKGREM 79 T E L ++GLGPVAGVDE GRGAC GP+ +AACV+ ++E L DSKKL+ K RE Sbjct: 9 TYEVALSKAGLGPVAGVDEAGRGACCGPITIAACVMPDRPIKELAQLTDSKKLTPKQREK 68 Query: 80 LFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXXXXX 139 LFPLI A+ + VV I + ++D+ G+Q ANI GMRRAVA L RPGYVL+D Sbjct: 69 LFPLIKDKAVDWSVVHIGAGDIDKRGIQHANISGMRRAVARLEARPGYVLTDALFIPGLT 128 Query: 140 XXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLALTQ 199 DA CIAAASVLAKVSRD LM +D YPGYG A+HKGY T+AH A+ Sbjct: 129 QPHLPIIGGDAAARCIAAASVLAKVSRDHLMHELDVRYPGYGLASHKGYGTKAHEAAIAA 188 Query: 200 LGPCPEHRYSFINVRRIVTRSNTRA 224 LG CPEHR S+ NVRR RA Sbjct: 189 LGACPEHRMSYENVRRAHAEFAARA 213 >sp|Q0RDP7|RNH2_FRAAA Tax_Id=326424 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Frankia alni] Length = 241 Score = 206 bits (524), Expect = 2e-51 Identities = 116/207 (56%), Positives = 134/207 (64%), Gaps = 6/207 (2%) Query: 10 IIRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPG---RLEESL 66 +IR+ GL G E L R GLGPVAGVDE GRGACAGPLVVAA VLGP RL L Sbjct: 7 VIRRDAGLFGY---ERALVRCGLGPVAGVDEAGRGACAGPLVVAAVVLGPDGRRRLSPRL 63 Query: 67 DDSKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPG 126 DSK L+ + RE LF + R A + V IP+ E+DR GV VANI GMRRAVA L RPG Sbjct: 64 ADSKLLTEQVREGLFDEVLRAAADWSAVVIPAAEIDRTGVHVANITGMRRAVARLGHRPG 123 Query: 127 YVLSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHK 186 YVL+DGF D V ACIAAAS++AKV+RDR+M A+ Y Y FA HK Sbjct: 124 YVLTDGFAVAGFGTESLAVVKGDRVAACIAAASIVAKVTRDRIMRALHTRYAEYDFAQHK 183 Query: 187 GYCTRAHSLALTQLGPCPEHRYSFINV 213 GY T AH+ AL + GPC EHR S++NV Sbjct: 184 GYVTAAHAAALARYGPCDEHRKSYVNV 210 >sp|A0LV66|RNH2_ACIC1 Tax_Id=351607 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Acidothermus cellulolyticus] Length = 307 Score = 206 bits (524), Expect = 2e-51 Identities = 115/206 (55%), Positives = 131/206 (63%), Gaps = 2/206 (0%) Query: 20 MWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDDSKKLSAKGR 77 ++ E L R GL PVAGVDE GRGACAGPLVVAA +LG R L DSK+L+ R Sbjct: 31 LYRYERRLARLGLEPVAGVDEAGRGACAGPLVVAAVILGSDRRNRIAGLADSKQLTPAAR 90 Query: 78 EMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXXX 137 E ++ I ALA+ VV IPS EVD GV ANI GMRRAVAGL+VRP YVL+DGF Sbjct: 91 ESIYNEIISRALAWSVVVIPSSEVDELGVHAANITGMRRAVAGLAVRPAYVLTDGFSIAG 150 Query: 138 XXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLAL 197 D VACIAAASV+AKV+RDRLMV + +P Y FA HKGY T H AL Sbjct: 151 LNAPGLAVCKGDEAVACIAAASVVAKVTRDRLMVELHEKFPMYEFATHKGYVTAGHRAAL 210 Query: 198 TQLGPCPEHRYSFINVRRIVTRSNTR 223 + GPCPEHR SF+ VRR R R Sbjct: 211 ARHGPCPEHRRSFVTVRRAGGRMELR 236 >tr|C2GKT9|C2GKT9_9CORY Tax_Id=548478 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Corynebacterium glucuronolyticum ATCC 51866] Length = 208 Score = 204 bits (519), Expect = 7e-51 Identities = 108/197 (54%), Positives = 131/197 (66%), Gaps = 2/197 (1%) Query: 20 MWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEES--LDDSKKLSAKGR 77 M T E L ++GLGPVAGVDE GRGACAGP+ +AAC+L + E LDDSKKL+ R Sbjct: 1 MRTHEVALAKAGLGPVAGVDEAGRGACAGPITIAACILPDQFIPELELLDDSKKLTPARR 60 Query: 78 EMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXXX 137 LFPLI R+A+A+H+V I + ++D G+ ANI GMRRAV GL+VRPGYVL+D + Sbjct: 61 AHLFPLIKRHAIAWHIVHISAHDIDERGITDANISGMRRAVGGLAVRPGYVLTDAWWVPG 120 Query: 138 XXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLAL 197 DA CIAAASVLAK SRD++M+ DA YPGYGFA HKGY T H A+ Sbjct: 121 FAQPSLPVIGGDATARCIAAASVLAKYSRDQIMIDYDAQYPGYGFAGHKGYGTAKHMDAV 180 Query: 198 TQLGPCPEHRYSFINVR 214 G P HRYS+ NVR Sbjct: 181 RHHGASPIHRYSYSNVR 197 >tr|C0VVB9|C0VVB9_9CORY Tax_Id=548477 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Corynebacterium glucuronolyticum ATCC 51867] Length = 208 Score = 204 bits (519), Expect = 7e-51 Identities = 108/197 (54%), Positives = 131/197 (66%), Gaps = 2/197 (1%) Query: 20 MWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEES--LDDSKKLSAKGR 77 M T E L ++GLGPVAGVDE GRGACAGP+ +AAC+L + E LDDSKKL+ R Sbjct: 1 MRTHEVALAKAGLGPVAGVDEAGRGACAGPITIAACILPDQFIPELELLDDSKKLTPARR 60 Query: 78 EMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXXX 137 LFPLI R+A+A+H+V I + ++D G+ ANI GMRRAV GL+VRPGYVL+D + Sbjct: 61 AHLFPLIKRHAIAWHIVHISAHDIDERGITDANISGMRRAVGGLAVRPGYVLTDAWWVPG 120 Query: 138 XXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLAL 197 DA CIAAASVLAK SRD++M+ DA YPGYGFA HKGY T H A+ Sbjct: 121 FAQPSLPVIGGDATARCIAAASVLAKYSRDQIMIDYDAQYPGYGFAGHKGYGTAKHMDAV 180 Query: 198 TQLGPCPEHRYSFINVR 214 G P HRYS+ NVR Sbjct: 181 RHHGASPIHRYSYSNVR 197 >tr|C0WKI7|C0WKI7_9CORY Tax_Id=525260 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Corynebacterium accolens ATCC 49725] Length = 213 Score = 199 bits (506), Expect = 2e-49 Identities = 109/211 (51%), Positives = 134/211 (63%), Gaps = 4/211 (1%) Query: 17 LRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEESLD---DSKKLS 73 L+ T E L ++GLGPVAGVDE GRGAC GP+ +AAC+L P R+ LD DSKKL+ Sbjct: 4 LKQQRTFEVALAKAGLGPVAGVDEAGRGACCGPITIAACIL-PERIVGELDTLTDSKKLT 62 Query: 74 AKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGF 133 + RE LFP+I A+ + VV I + ++D+ G+Q AN GMRRAVA L RPGYVLSD Sbjct: 63 PRQREKLFPIIKDKAVDWSVVHIGAGDIDKRGIQHANTSGMRRAVARLEQRPGYVLSDAL 122 Query: 134 RXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAH 193 DA CIAAASVLAKVSRD LM+ +D +PGYG A HKGY T+AH Sbjct: 123 FIPGLTQPHLPIVGGDAAARCIAAASVLAKVSRDHLMLDLDERFPGYGLAGHKGYGTKAH 182 Query: 194 SLALTQLGPCPEHRYSFINVRRIVTRSNTRA 224 A+ LG PEHR S+ NV+R + RA Sbjct: 183 EAAIAALGASPEHRMSYSNVQRAHAQFTARA 213 >tr|C2CNT2|C2CNT2_CORST Tax_Id=525268 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Corynebacterium striatum ATCC 6940] Length = 213 Score = 198 bits (504), Expect = 4e-49 Identities = 106/200 (53%), Positives = 129/200 (64%), Gaps = 4/200 (2%) Query: 17 LRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEESLD---DSKKLS 73 L+ T E L ++GLGPVAGVDE GRGAC GP+ +AAC+L P ++ LD DSKKLS Sbjct: 4 LKQQRTYEVALSKAGLGPVAGVDEAGRGACCGPITIAACIL-PDKIIPELDKLTDSKKLS 62 Query: 74 AKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGF 133 RE LFP+I A+A+ VV I + ++D+ G+Q AN+ GMRRAVA L VRP YVLSD Sbjct: 63 PATRERLFPIIKDKAVAWSVVHIDARDIDKRGIQHANVSGMRRAVARLDVRPHYVLSDAL 122 Query: 134 RXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAH 193 + DA CIAAASVLAKVSRD +M +D YPGYG A HKGY T AH Sbjct: 123 KVPGMPAPQLPIIGGDAAARCIAAASVLAKVSRDHIMDELDVAYPGYGLAGHKGYGTAAH 182 Query: 194 SLALTQLGPCPEHRYSFINV 213 A+ +LG PEHR + NV Sbjct: 183 QAAIVKLGATPEHRMGYANV 202 >sp|A1SLS0|RNH2_NOCSJ Tax_Id=196162 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Nocardioides sp.] Length = 240 Score = 198 bits (503), Expect = 5e-49 Identities = 111/230 (48%), Positives = 137/230 (59%), Gaps = 14/230 (6%) Query: 11 IRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGR--LEESLDD 68 IRK GL G E L+R G+ P+AGVDE GRGACAGPLV A +L PG+ + L D Sbjct: 10 IRKDAGLYGY---ERALRRHGIEPIAGVDEAGRGACAGPLVAGAAILPPGKAGIVPGLAD 66 Query: 69 SKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYV 128 SK L+ + RE + I R A+++ VV + E DR G+ VAN+E +RRAVA L + P YV Sbjct: 67 SKLLTERARERCYEQIVRRAVSWSVVVVSHEECDRLGMHVANVEALRRAVALLDLPPAYV 126 Query: 129 LSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGY 188 L+DGF D V ACI+AASVLAKV+RDR+M +DA +P Y F HKGY Sbjct: 127 LTDGFPVDGLGVPGLAVWKGDRVAACISAASVLAKVTRDRIMTELDASWPAYDFKTHKGY 186 Query: 189 CTRAHSLALTQLGPCPEHRYSFINVRRIVTRSNTRAVAGFTPAPPAEHGE 238 T HS ALT GP P HR F+NVRR AG P P ++GE Sbjct: 187 ITEVHSAALTAHGPSPIHRMRFVNVRR---------AAGLEPLDPVQNGE 227 >tr|C0XSA3|C0XSA3_9CORY Tax_Id=525263 (rnhB)RecName: Full=Ribonuclease; EC=3.1.26.-;[Corynebacterium lipophiloflavum DSM 44291] Length = 213 Score = 198 bits (503), Expect = 5e-49 Identities = 106/201 (52%), Positives = 128/201 (63%), Gaps = 2/201 (0%) Query: 17 LRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDDSKKLSA 74 L+ + T E L ++GLGPVAGVDE GRGAC GP+ VAACVL P L + L DSK+L Sbjct: 4 LKQLRTYEVALDKAGLGPVAGVDEAGRGACFGPVTVAACVLPPRPLAQLDGLTDSKQLRP 63 Query: 75 KGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFR 134 R L+ IC AL++ VV IP+ E+DR G+QVAN++G RRAVA L RPGYVL D R Sbjct: 64 VARASLYDAICDVALSFAVVHIPAAEIDRRGIQVANVDGARRAVAKLGARPGYVLVDALR 123 Query: 135 XXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHS 194 D+ CIAAASVLAKVSRDRL+ M Y YG A HKGY T+AH Sbjct: 124 VPGLTAPQLPIIGGDSTARCIAAASVLAKVSRDRLVTEMAQRYADYGIAGHKGYGTQAHM 183 Query: 195 LALTQLGPCPEHRYSFINVRR 215 A+ + G EHRYS+ NVR+ Sbjct: 184 AAVRRYGASDEHRYSYANVRQ 204 >sp|Q2J702|RNH2_FRASC Tax_Id=106370 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Frankia sp.] Length = 240 Score = 197 bits (501), Expect = 8e-49 Identities = 109/205 (53%), Positives = 132/205 (64%), Gaps = 5/205 (2%) Query: 11 IRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDD 68 +R+ GL G E L R GLGPVAGVDE GRGACAGPLV+AA +L P + L D Sbjct: 8 LRRDAGLFGY---ERALNRHGLGPVAGVDEAGRGACAGPLVIAAVILAPEARQRLARLAD 64 Query: 69 SKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYV 128 SK L+ + RE +F + A A+ V I + E+DR G+ VANI GMRRAVA LS RPGYV Sbjct: 65 SKLLTEQIRESVFEDVMAAAAAWSTVVISAAEIDRVGLHVANITGMRRAVARLSARPGYV 124 Query: 129 LSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGY 188 L+DGF D VVAC+AAASV+AKV+RDR+M A+ Y Y FA HKGY Sbjct: 125 LTDGFAVAGFGVESLAVVKGDRVVACVAAASVVAKVTRDRIMRALHTRYAEYDFAQHKGY 184 Query: 189 CTRAHSLALTQLGPCPEHRYSFINV 213 T AH+ AL + GPC EHR S++NV Sbjct: 185 VTAAHAAALARCGPCDEHRMSYVNV 209 >tr|C6WEV2|C6WEV2_ACTMD Tax_Id=446462 RecName: Full=Ribonuclease; EC=3.1.26.-;[Actinosynnema mirum] Length = 258 Score = 196 bits (497), Expect = 2e-48 Identities = 106/203 (52%), Positives = 126/203 (62%), Gaps = 2/203 (0%) Query: 19 GMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDDSKKLSAKG 76 G W + L R GLGPVAGVDE GRGACAGPLVVAA VL G L DSK L+A Sbjct: 15 GTWAFQAALDRRGLGPVAGVDEAGRGACAGPLVVAAAVLRTGDAARFAGLTDSKLLTAAA 74 Query: 77 REMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXX 136 R+ + L+ AL + VV +P+ EVD GV VAN+EGMRRAVA L PGYVL+DGF Sbjct: 75 RDRMHDLVLERALDHAVVVVPADEVDAIGVHVANVEGMRRAVARLGTHPGYVLTDGFPVP 134 Query: 137 XXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLA 196 D V AC+AAASVLAKV+RDR+M + + P YGF HKGY T AH+ A Sbjct: 135 GLTAPNAPLVKGDRVAACVAAASVLAKVTRDRIMAELHEELPVYGFDVHKGYGTAAHTAA 194 Query: 197 LTQLGPCPEHRYSFINVRRIVTR 219 L + GP +HR+S+ NV R Sbjct: 195 LLEHGPSGQHRWSYANVAAAAAR 217 >tr|C1WPU5|C1WPU5_9ACTO Tax_Id=479435 RecName: Full=Ribonuclease; EC=3.1.26.-;[Kribbella flavida DSM 17836] Length = 232 Score = 194 bits (494), Expect = 5e-48 Identities = 109/207 (52%), Positives = 131/207 (63%), Gaps = 5/207 (2%) Query: 11 IRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDD 68 IR+ GL G E L+R GL P+AGVDE GRG CAGPLV AA +L G+ + L D Sbjct: 10 IRRDAGLYGY---ERALRRVGLDPIAGVDEAGRGPCAGPLVAAAVILPDGKRGQIPELAD 66 Query: 69 SKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYV 128 SK L+AK RE + I + ALA+ VV I + E DR G+ VAN++ +RRA+ L VRP YV Sbjct: 67 SKLLTAKARERCYDEIRKRALAWSVVSIEADECDRLGMHVANVQALRRALFRLDVRPQYV 126 Query: 129 LSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGY 188 L+DGF D V ACIAAASV+AKV+RDR+M D YP YGFA HKGY Sbjct: 127 LTDGFGVDGLGVPGLAIWKGDRVAACIAAASVVAKVTRDRIMEHWDTVYPQYGFAIHKGY 186 Query: 189 CTRAHSLALTQLGPCPEHRYSFINVRR 215 CT H AL + GPCP+HR F NVRR Sbjct: 187 CTPEHQAALDEYGPCPQHRRRFENVRR 213 >sp|A8L6C6|RNH2_FRASN Tax_Id=298653 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Frankia sp.] Length = 240 Score = 193 bits (491), Expect = 1e-47 Identities = 109/205 (53%), Positives = 131/205 (63%), Gaps = 5/205 (2%) Query: 11 IRKSGGLRGMWTLEYELQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLE--ESLDD 68 IR GL G E L R GLGPVAGVDE GRGACAGP+VVAA VL RL L D Sbjct: 8 IRSDAGLFGY---ERALVRRGLGPVAGVDEAGRGACAGPMVVAAVVLDQRRLGLLRRLAD 64 Query: 69 SKKLSAKGREMLFPLICRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYV 128 SK L+ + RE + + A A + IP+ E+DR+GV VANI GMRRAVA L VRP YV Sbjct: 65 SKLLTERVREEVHADVLAAAAAVSTIVIPAAEIDRNGVHVANIMGMRRAVAVLDVRPRYV 124 Query: 129 LSDGFRXXXXXXXXXXXXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGY 188 L+DGF D +V CIAAASV+AKV+RDR+M ++ YP Y FA HKGY Sbjct: 125 LTDGFAVAGLGAESLAVIKGDLMVGCIAAASVVAKVTRDRIMRSLHKRYPEYDFAQHKGY 184 Query: 189 CTRAHSLALTQLGPCPEHRYSFINV 213 T AH+ A+T+ GPC +HR S++NV Sbjct: 185 VTAAHTAAMTRYGPCEQHRLSYVNV 209 >sp|Q8NNZ4|RNH2_CORGL Tax_Id=1718 (rnhB)RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;[Corynebacterium glutamicum] Length = 209 Score = 192 bits (488), Expect = 3e-47 Identities = 100/191 (52%), Positives = 125/191 (65%), Gaps = 2/191 (1%) Query: 27 LQRSGLGPVAGVDEVGRGACAGPLVVAACVLGPGRLEE--SLDDSKKLSAKGREMLFPLI 84 + R+GLGPVAGVDE GRGAC GP+ +AAC+L ++E +L DSKKLSA RE L PLI Sbjct: 1 MSRNGLGPVAGVDEAGRGACCGPISIAACILPDKPIQELAALTDSKKLSASTREKLMPLI 60 Query: 85 CRYALAYHVVFIPSVEVDRHGVQVANIEGMRRAVAGLSVRPGYVLSDGFRXXXXXXXXXX 144 ++ALA+ V+ I + ++DR G+Q ANI GMRRAVA L +PGYVL+D + Sbjct: 61 KKHALAWSVIVISAQDIDRFGIQHANISGMRRAVAALGTQPGYVLTDAMKVPGFTVPYLP 120 Query: 145 XXXXDAVVACIAAASVLAKVSRDRLMVAMDADYPGYGFAAHKGYCTRAHSLALTQLGPCP 204 DA CIAAASVLAK +RD +M M DYP YG HKGY T+ H A+ G P Sbjct: 121 IIGGDASARCIAAASVLAKQTRDDIMTDMANDYPHYGLEIHKGYSTKIHMDAVRHHGASP 180 Query: 205 EHRYSFINVRR 215 EHRYS+ NV + Sbjct: 181 EHRYSYANVAK 191 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.324 0.138 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 1,713,441,266 Number of extensions: 63904781 Number of successful extensions: 119331 Number of sequences better than 10.0: 1957 Number of HSP's gapped: 117836 Number of HSP's successfully gapped: 2013 Length of query: 240 Length of database: 3,808,957,724 Length adjustment: 133 Effective length of query: 107 Effective length of database: 2,325,566,962 Effective search space: 248835664934 Effective search space used: 248835664934 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 78 (34.7 bits)