BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML1841c
         (71 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|O33001|RL30_MYCLE Tax_Id=1769 (rpmD)RecName: Full=50S ribosom...   140   3e-32
sp|B8ZSA1|RL30_MYCLB Tax_Id=561304 (rpmD)RecName: Full=50S ribos...   140   3e-32
sp|P66181|RL30_MYCTU Tax_Id=1773 (rpmD)RecName: Full=50S ribosom...   110   4e-23
sp|A5U0A8|RL30_MYCTA Tax_Id=419947 (rpmD)RecName: Full=50S ribos...   110   4e-23
sp|C1AL56|RL30_MYCBT Tax_Id=561275 (rpmD)RecName: Full=50S ribos...   110   4e-23
sp|A1KGK3|RL30_MYCBP Tax_Id=410289 (rpmD)RecName: Full=50S ribos...   110   4e-23
sp|P66182|RL30_MYCBO Tax_Id=1765 (rpmD)RecName: Full=50S ribosom...   110   4e-23
tr|C6DUN7|C6DUN7_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal...   110   4e-23
tr|A5WK90|A5WK90_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal...   110   4e-23
tr|A4KF42|A4KF42_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal...   110   4e-23
tr|A2VG30|A2VG30_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal...   110   4e-23
sp|Q73S91|RL30_MYCPA Tax_Id=1770 (rpmD)RecName: Full=50S ribosom...   109   8e-23
sp|A0QKZ4|RL30_MYCA1 Tax_Id=243243 (rpmD)RecName: Full=50S ribos...   109   8e-23
sp|A0PM83|RL30_MYCUA Tax_Id=362242 (rpmD)RecName: Full=50S ribos...   106   7e-22
sp|B2HCT9|RL30_MYCMM Tax_Id=216594 (rpmD)RecName: Full=50S ribos...   106   7e-22
sp|A4TED3|RL30_MYCGI Tax_Id=350054 (rpmD)RecName: Full=50S ribos...    96   1e-18
sp|A0QSG7|RL30_MYCS2 Tax_Id=246196 (rpmD)RecName: Full=50S ribos...    95   3e-18
sp|A1T4S4|RL30_MYCVP Tax_Id=350058 (rpmD)RecName: Full=50S ribos...    94   5e-18
sp|B1MGC4|RL30_MYCA9 Tax_Id=561007 (rpmD)RecName: Full=50S ribos...    93   8e-18
sp|A3PVE3|RL30_MYCSJ Tax_Id=164757 (rpmD)RecName: Full=50S ribos...    90   7e-17
sp|Q1BD87|RL30_MYCSS Tax_Id=164756 (rpmD)RecName: Full=50S ribos...    88   3e-16
sp|A1UBQ6|RL30_MYCSK Tax_Id=189918 (rpmD)RecName: Full=50S ribos...    88   3e-16
sp|Q0S3F8|RL30_RHOSR Tax_Id=101510 (rpmD)RecName: Full=50S ribos...    79   1e-13
sp|C1B030|RL30_RHOOB Tax_Id=632772 (rpmD)RecName: Full=50S ribos...    79   1e-13
sp|Q5Z1Q4|RL30_NOCFA Tax_Id=37329 (rpmD)RecName: Full=50S riboso...    79   1e-13
tr|C6WM09|C6WM09_ACTMD Tax_Id=446462 SubName: Full=Ribosomal pro...    78   4e-13
tr|C2AM04|C2AM04_TSUPA Tax_Id=521096 SubName: Full=LSU ribosomal...    77   6e-13
sp|C0ZW44|RL30_RHOE4 Tax_Id=234621 (rpmD)RecName: Full=50S ribos...    77   8e-13
tr|C3JH07|C3JH07_RHOER Tax_Id=596309 (rpmD)SubName: Full=Ribosom...    77   8e-13
sp|C4LL08|RL30_CORK4 Tax_Id=645127 (rpmD)RecName: Full=50S ribos...    76   1e-12
tr|C7MTW5|C7MTW5_SACVD Tax_Id=471857 SubName: Full=LSU ribosomal...    75   2e-12
sp|Q8NSX3|RL30_CORGL Tax_Id=1718 (rpmD)RecName: Full=50S ribosom...    72   2e-11
sp|Q8FS51|RL30_COREF Tax_Id=152794 (rpmD)RecName: Full=50S ribos...    72   2e-11
tr|D0L2G9|D0L2G9_9ACTO Tax_Id=526226 SubName: Full=Ribosomal pro...    72   2e-11
sp|A4QBL5|RL30_CORGB Tax_Id=340322 (rpmD)RecName: Full=50S ribos...    71   4e-11
tr|C0W6E5|C0W6E5_9ACTO Tax_Id=525246 SubName: Full=Ribosomal pro...    71   4e-11
sp|B1VEX3|RL30_CORU7 Tax_Id=504474 (rpmD)RecName: Full=50S ribos...    70   1e-10
tr|C8RUK2|C8RUK2_CORJE Tax_Id=525262 (rpmD)SubName: Full=Conserv...    70   1e-10
tr|C7R0W2|C7R0W2_JONDD Tax_Id=471856 SubName: Full=Ribosomal pro...    69   1e-10
sp|Q4JT87|RL30_CORJK Tax_Id=306537 (rpmD)RecName: Full=50S ribos...    68   3e-10
tr|C0VZ27|C0VZ27_9ACTO Tax_Id=525245 SubName: Full=Ribosomal pro...    68   4e-10
tr|C0U8N1|C0U8N1_9ACTO Tax_Id=526225 SubName: Full=LSU ribosomal...    68   4e-10
sp|A4XBM8|RL30_SALTO Tax_Id=369723 (rpmD)RecName: Full=50S ribos...    67   5e-10
tr|C4RAW0|C4RAW0_9ACTO Tax_Id=219305 SubName: Full=50S ribosomal...    67   5e-10
sp|A8M511|RL30_SALAI Tax_Id=391037 (rpmD)RecName: Full=50S ribos...    67   6e-10
tr|C2A432|C2A432_THECU Tax_Id=471852 SubName: Full=LSU ribosomal...    67   6e-10
tr|C4ECU5|C4ECU5_STRRS Tax_Id=479432 SubName: Full=LSU ribosomal...    67   8e-10
tr|C5VF11|C5VF11_9CORY Tax_Id=553207 (rpmD)SubName: Full=Ribosom...    66   1e-09
tr|C0E0G9|C0E0G9_9CORY Tax_Id=566549 SubName: Full=Putative unch...    66   1e-09
tr|C7Q2N9|C7Q2N9_CATAD Tax_Id=479433 SubName: Full=Ribosomal pro...    65   2e-09

>sp|O33001|RL30_MYCLE Tax_Id=1769 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium leprae]
          Length = 71

 Score =  140 bits (354), Expect = 3e-32
 Identities = 71/71 (100%), Positives = 71/71 (100%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT 60
          MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT
Sbjct: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT 60

Query: 61 GGSTPVGGGRD 71
          GGSTPVGGGRD
Sbjct: 61 GGSTPVGGGRD 71


>sp|B8ZSA1|RL30_MYCLB Tax_Id=561304 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium leprae]
          Length = 71

 Score =  140 bits (354), Expect = 3e-32
 Identities = 71/71 (100%), Positives = 71/71 (100%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT 60
          MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT
Sbjct: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT 60

Query: 61 GGSTPVGGGRD 71
          GGSTPVGGGRD
Sbjct: 61 GGSTPVGGGRD 71


>sp|P66181|RL30_MYCTU Tax_Id=1773 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium tuberculosis]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>sp|A5U0A8|RL30_MYCTA Tax_Id=419947 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium tuberculosis]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>sp|C1AL56|RL30_MYCBT Tax_Id=561275 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium bovis]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>sp|A1KGK3|RL30_MYCBP Tax_Id=410289 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium bovis]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>sp|P66182|RL30_MYCBO Tax_Id=1765 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium bovis]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>tr|C6DUN7|C6DUN7_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal
          protein L30 rpmD;[Mycobacterium tuberculosis]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>tr|A5WK90|A5WK90_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal
          protein L30 rpmD;[Mycobacterium tuberculosis]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>tr|A4KF42|A4KF42_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal
          protein L30 rpmD;[Mycobacterium tuberculosis str.
          Haarlem]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>tr|A2VG30|A2VG30_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal
          protein L30 rpmD;[Mycobacterium tuberculosis C]
          Length = 65

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA- 59
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN  TRGLIAVVRHLVEVEPA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ 60

Query: 60 TGGST 64
          TGG T
Sbjct: 61 TGGKT 65


>sp|Q73S91|RL30_MYCPA Tax_Id=1770 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium paratuberculosis]
          Length = 71

 Score =  109 bits (273), Expect = 8e-23
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT 60
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN QTRGLIAVV HLVEV PA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNPQTRGLIAVVSHLVEVAPAD 60

Query: 61 GGSTPVGGGR 70
            S   GG +
Sbjct: 61 ASSAGTGGSK 70


>sp|A0QKZ4|RL30_MYCA1 Tax_Id=243243 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium avium]
          Length = 71

 Score =  109 bits (273), Expect = 8e-23
 Identities = 56/70 (80%), Positives = 58/70 (82%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPAT 60
          M+ LKITQVRSTIG RWKQRESLRTLGLRRIRHSVIREDN QTRGLIAVV HLVEV PA 
Sbjct: 1  MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNPQTRGLIAVVSHLVEVAPAD 60

Query: 61 GGSTPVGGGR 70
            S   GG +
Sbjct: 61 ASSAGTGGSK 70


>sp|A0PM83|RL30_MYCUA Tax_Id=362242 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium ulcerans]
          Length = 72

 Score =  106 bits (265), Expect = 7e-22
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 4  LKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATGGS 63
          LKITQVRSTIG RWKQRESLRTLGLRRIRH+V+R+DN QTRGLIAVVRHLVEVEPA  G+
Sbjct: 8  LKITQVRSTIGARWKQRESLRTLGLRRIRHTVVRDDNAQTRGLIAVVRHLVEVEPAQNGT 67


>sp|B2HCT9|RL30_MYCMM Tax_Id=216594 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium marinum]
          Length = 72

 Score =  106 bits (265), Expect = 7e-22
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 4  LKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATGGS 63
          LKITQVRSTIG RWKQRESLRTLGLRRIRH+V+R+DN QTRGLIAVVRHLVEVEPA  G+
Sbjct: 8  LKITQVRSTIGARWKQRESLRTLGLRRIRHTVVRDDNAQTRGLIAVVRHLVEVEPAQNGT 67


>sp|A4TED3|RL30_MYCGI Tax_Id=350054 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium gilvum]
          Length = 61

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 48/57 (84%), Positives = 50/57 (87%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQVRSTIG RWKQRESLRTLGLR+IR SV+REDN QTRGLI  V HLVEVE
Sbjct: 1  MAELKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDNAQTRGLIKTVHHLVEVE 57


>sp|A0QSG7|RL30_MYCS2 Tax_Id=246196 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium smegmatis]
          Length = 61

 Score = 94.7 bits (234), Expect = 3e-18
 Identities = 47/57 (82%), Positives = 50/57 (87%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQVRSTIG RWKQRESLRTLGL++IR SV+REDN QTRGLI  V HLVEVE
Sbjct: 1  MAELKITQVRSTIGARWKQRESLRTLGLKKIRQSVVREDNAQTRGLINTVHHLVEVE 57


>sp|A1T4S4|RL30_MYCVP Tax_Id=350058 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium vanbaalenii]
          Length = 59

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 47/57 (82%), Positives = 49/57 (85%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQVRSTIG RWKQRESLRTLGLR+IR SV+REDN QTRGLI  V HLV VE
Sbjct: 1  MAELKITQVRSTIGARWKQRESLRTLGLRKIRQSVVREDNAQTRGLIKTVHHLVTVE 57


>sp|B1MGC4|RL30_MYCA9 Tax_Id=561007 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium abscessus]
          Length = 60

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA +KITQVRSTIG RWKQRESL+TLGLR+IR +V+REDN QTRGL+ VVRHLV VE
Sbjct: 1  MADVKITQVRSTIGARWKQRESLKTLGLRKIRQTVVREDNAQTRGLLQVVRHLVTVE 57


>sp|A3PVE3|RL30_MYCSJ Tax_Id=164757 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium sp.]
          Length = 59

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 45/57 (78%), Positives = 47/57 (82%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQVR TIG RW QRESLRTLGLR+IR SV+REDN QTRGLI  V HLV VE
Sbjct: 1  MAELKITQVRGTIGARWNQRESLRTLGLRKIRQSVVREDNAQTRGLIKTVHHLVVVE 57


>sp|Q1BD87|RL30_MYCSS Tax_Id=164756 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium sp.]
          Length = 61

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 44/57 (77%), Positives = 46/57 (80%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKI QVR TIG RW QRESLRTLGLR+IR SV+REDN QTRGLI  V HLV VE
Sbjct: 3  MAELKIIQVRGTIGARWNQRESLRTLGLRKIRQSVVREDNAQTRGLIKTVHHLVVVE 59


>sp|A1UBQ6|RL30_MYCSK Tax_Id=189918 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Mycobacterium sp.]
          Length = 61

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 44/57 (77%), Positives = 46/57 (80%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKI QVR TIG RW QRESLRTLGLR+IR SV+REDN QTRGLI  V HLV VE
Sbjct: 3  MAELKIIQVRGTIGARWNQRESLRTLGLRKIRQSVVREDNAQTRGLIKTVHHLVVVE 59


>sp|Q0S3F8|RL30_RHOSR Tax_Id=101510 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Rhodococcus sp.]
          Length = 59

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 39/57 (68%), Positives = 46/57 (80%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQ++STIG +  QR SLRTLGL+ IR +V+REDN Q RGLI VVRHLV VE
Sbjct: 1  MAELKVTQIKSTIGTKQNQRNSLRTLGLKGIRQTVVREDNAQNRGLINVVRHLVTVE 57


>sp|C1B030|RL30_RHOOB Tax_Id=632772 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Rhodococcus opacus]
          Length = 59

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 39/57 (68%), Positives = 46/57 (80%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQ++STIG +  QR SLRTLGL+ IR +V+REDN Q RGLI VVRHLV VE
Sbjct: 1  MAELKVTQIKSTIGTKQNQRNSLRTLGLKGIRQTVVREDNAQNRGLINVVRHLVTVE 57


>sp|Q5Z1Q4|RL30_NOCFA Tax_Id=37329 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Nocardia farcinica]
          Length = 59

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 40/57 (70%), Positives = 47/57 (82%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQ++S+IG +  QR+SLRTLGLR IR SV+REDN Q RGLI VVRHLV VE
Sbjct: 1  MADLKVTQIKSSIGAKKNQRDSLRTLGLRGIRKSVVREDNPQNRGLINVVRHLVTVE 57


>tr|C6WM09|C6WM09_ACTMD Tax_Id=446462 SubName: Full=Ribosomal
          protein L30;[Actinosynnema mirum]
          Length = 61

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 39/57 (68%), Positives = 45/57 (78%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQV+STIG +   RES+RTLGLR+IR SV+RED  Q RGLI  VRHLV VE
Sbjct: 1  MAQLKVTQVKSTIGTKHNHRESMRTLGLRKIRQSVVREDTPQVRGLIHAVRHLVVVE 57


>tr|C2AM04|C2AM04_TSUPA Tax_Id=521096 SubName: Full=LSU ribosomal
          protein L30P;[Tsukamurella paurometabola DSM 20162]
          Length = 59

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 40/57 (70%), Positives = 44/57 (77%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA  KITQVR TIG +  QR+SLRTLGL+ IR SV+RED  Q RGLI VV HLVEVE
Sbjct: 1  MAQFKITQVRGTIGTKQNQRDSLRTLGLKGIRKSVVREDTPQNRGLIQVVSHLVEVE 57


>sp|C0ZW44|RL30_RHOE4 Tax_Id=234621 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Rhodococcus erythropolis]
          Length = 59

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 37/57 (64%), Positives = 46/57 (80%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQ++S IG +  Q++SLRTLGL+ IR +V+REDN Q RGLI VVRHLV VE
Sbjct: 1  MADLKVTQIKSIIGTKQNQKDSLRTLGLKGIRQTVVREDNAQNRGLINVVRHLVTVE 57


>tr|C3JH07|C3JH07_RHOER Tax_Id=596309 (rpmD)SubName:
          Full=Ribosomal protein L30;[Rhodococcus erythropolis
          SK121]
          Length = 59

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 37/57 (64%), Positives = 46/57 (80%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQ++S IG +  Q++SLRTLGL+ IR +V+REDN Q RGLI VVRHLV VE
Sbjct: 1  MADLKVTQIKSIIGTKQNQKDSLRTLGLKGIRQTVVREDNAQNRGLINVVRHLVTVE 57


>sp|C4LL08|RL30_CORK4 Tax_Id=645127 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Corynebacterium kroppenstedtii]
          Length = 61

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 36/59 (61%), Positives = 47/59 (79%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQV+ T+G R KQ+++LR+LGL+RIRHSV++ D  Q RG+I VVRHLV VE   G
Sbjct: 2  ALKITQVKGTVGTRKKQKDNLRSLGLKRIRHSVVQPDTPQVRGMINVVRHLVTVEEVAG 60


>tr|C7MTW5|C7MTW5_SACVD Tax_Id=471857 SubName: Full=LSU ribosomal
          protein L30P;[Saccharomonospora viridis]
          Length = 60

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 39/57 (68%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQ RSTIG +   R SLRTLGLR+IR SV+RED  Q RGL+  VRHLV VE
Sbjct: 1  MAQLKITQTRSTIGTKQAHRASLRTLGLRKIRQSVVREDTPQVRGLLHAVRHLVTVE 57


>sp|Q8NSX3|RL30_CORGL Tax_Id=1718 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Corynebacterium glutamicum]
          Length = 61

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 33/59 (55%), Positives = 45/59 (76%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQ++ T+G + K RE+LR+LGL+RIRH+VIR D  + RG+I  VRHL+ VE   G
Sbjct: 2  ALKITQIKGTVGTKPKHRENLRSLGLKRIRHTVIRPDTPEVRGMILAVRHLIVVEEVAG 60


>sp|Q8FS51|RL30_COREF Tax_Id=152794 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Corynebacterium efficiens]
          Length = 61

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 33/59 (55%), Positives = 45/59 (76%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQV+ TIG + K R++LR+LGL+RIRHSV+R D  + RG++  VRHL+ VE   G
Sbjct: 2  ALKITQVKGTIGTKPKHRDNLRSLGLKRIRHSVVRPDTPEVRGMVQAVRHLIVVEEVAG 60


>tr|D0L2G9|D0L2G9_9ACTO Tax_Id=526226 SubName: Full=Ribosomal
          protein L30;[Gordonia bronchialis DSM 43247]
          Length = 60

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 39/57 (68%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQV+ TIG +  QR+SLRTLGL+ IR SV RED    RGLI VVRHLV VE
Sbjct: 1  MAELKITQVKGTIGTKKNQRDSLRTLGLKGIRKSVTREDTPINRGLINVVRHLVTVE 57


>sp|A4QBL5|RL30_CORGB Tax_Id=340322 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Corynebacterium glutamicum]
          Length = 61

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQ++ T+G + K R++LR+LGL+RIRH+VIR D  + RG+I  VRHL+ VE   G
Sbjct: 2  ALKITQIKGTVGTKPKHRDNLRSLGLKRIRHTVIRPDTPEVRGMILAVRHLIVVEEVAG 60


>tr|C0W6E5|C0W6E5_9ACTO Tax_Id=525246 SubName: Full=Ribosomal
          protein L30;[Actinomyces urogenitalis DSM 15434]
          Length = 65

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 37/56 (66%), Positives = 44/56 (78%)

Query: 4  LKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPA 59
          LKITQVRS IG   +QRE+L++LGLR+IR SV+REDN   RG+IA V HLV VE A
Sbjct: 10 LKITQVRSGIGGTRRQRETLQSLGLRKIRQSVVREDNPSVRGMIATVAHLVTVEEA 65


>sp|B1VEX3|RL30_CORU7 Tax_Id=504474 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Corynebacterium urealyticum]
          Length = 61

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 33/59 (55%), Positives = 44/59 (74%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKI Q++ T+G +  QR++LR+LGL+RI   VIREDN  TRG++  VRHLVEVE   G
Sbjct: 2  ALKIRQIKGTVGRKQNQRDTLRSLGLKRIGQEVIREDNSVTRGMVHTVRHLVEVEEVAG 60


>tr|C8RUK2|C8RUK2_CORJE Tax_Id=525262 (rpmD)SubName:
          Full=Conserved domain protein;[Corynebacterium jeikeium
          ATCC 43734]
          Length = 61

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 34/59 (57%), Positives = 45/59 (76%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQV+  +G + KQR+S+R+LGL+RI  +V+REDN   RG I VVRH+VEVE   G
Sbjct: 2  ALKITQVKGLVGTKPKQRDSMRSLGLKRIGQTVVREDNPIVRGQINVVRHMVEVEEVAG 60


>tr|C7R0W2|C7R0W2_JONDD Tax_Id=471856 SubName: Full=Ribosomal
          protein L30;[Jonesia denitrificans]
          Length = 60

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA+LK+TQV+S IG +  QR++LRTLGL++I  S +RED  + RGLIA V HLV VE
Sbjct: 1  MANLKVTQVKSAIGGKQNQRDTLRTLGLKKIGQSTVREDRPEVRGLIATVAHLVTVE 57


>sp|Q4JT87|RL30_CORJK Tax_Id=306537 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Corynebacterium jeikeium]
          Length = 61

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 33/59 (55%), Positives = 44/59 (74%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQV+  +G + KQR+S+R+LGL+RI  +V+REDN   RG I  VRH+VEVE   G
Sbjct: 2  ALKITQVKGLVGTKPKQRDSMRSLGLKRIGQTVVREDNPIVRGQINTVRHMVEVEEVAG 60


>tr|C0VZ27|C0VZ27_9ACTO Tax_Id=525245 SubName: Full=Ribosomal
          protein L30;[Actinomyces coleocanis DSM 15436]
          Length = 60

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 35/57 (61%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA+LKIT+VRS IG   +QR ++R LGLR+I  SV+REDN   RG+I  VRHLV VE
Sbjct: 1  MANLKITRVRSDIGRPQEQRRTMRALGLRKIGQSVVREDNKALRGMILAVRHLVTVE 57


>tr|C0U8N1|C0U8N1_9ACTO Tax_Id=526225 SubName: Full=LSU ribosomal
          protein L30P;[Geodermatophilus obscurus DSM 43160]
          Length = 60

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 31/57 (54%), Positives = 44/57 (77%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQ+RS IG +  QR++LR+LGL+R+  SV++ED  + RG++A V HLV VE
Sbjct: 1  MAQLKVTQIRSAIGTKPNQRQTLRSLGLKRVNDSVVQEDRPEIRGMVATVPHLVTVE 57


>sp|A4XBM8|RL30_SALTO Tax_Id=369723 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Salinispora tropica]
          Length = 60

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQVRS IG +  QR+SLR+LGL+RI   V++ED  + RG+I  V HLV+VE
Sbjct: 1  MARLKVTQVRSEIGTKQNQRDSLRSLGLKRINDVVVKEDRPEIRGMIFTVNHLVKVE 57


>tr|C4RAW0|C4RAW0_9ACTO Tax_Id=219305 SubName: Full=50S ribosomal
          protein L30;[Micromonospora sp. ATCC 39149]
          Length = 60

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQVRS IG +  QR+SLR+LGL+RI   V++ED  + RG+I  V HLV+VE
Sbjct: 1  MARLKVTQVRSEIGTKQNQRDSLRSLGLKRINDVVVKEDRPEIRGMIFAVNHLVKVE 57


>sp|A8M511|RL30_SALAI Tax_Id=391037 (rpmD)RecName: Full=50S
          ribosomal protein L30;[Salinispora arenicola]
          Length = 60

 Score = 67.0 bits (162), Expect = 6e-10
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LK+TQVRS IG +  QR+SLR+LGL+RI   V++ED  + RG+I  V HLV+VE
Sbjct: 1  MARLKVTQVRSEIGTKRNQRDSLRSLGLKRINDVVVKEDRPEIRGMIFTVNHLVKVE 57


>tr|C2A432|C2A432_THECU Tax_Id=471852 SubName: Full=LSU ribosomal
          protein L30P;[Thermomonospora curvata DSM 43183]
          Length = 60

 Score = 67.0 bits (162), Expect = 6e-10
 Identities = 35/57 (61%), Positives = 42/57 (73%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          M+ LKITQV+S I  +  QR++LRTLGL+RI  SVIRED  Q RG+I  V HLV VE
Sbjct: 1  MSRLKITQVKSRISEKQNQRDTLRTLGLKRIGDSVIREDTQQVRGMIRTVAHLVTVE 57


>tr|C4ECU5|C4ECU5_STRRS Tax_Id=479432 SubName: Full=LSU ribosomal
          protein L30P;[Streptosporangium roseum DSM 43021]
          Length = 60

 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQVRS IG +  QR+SLR+LGL+RI   V++ED  + RG++ VV HLV VE
Sbjct: 1  MARLKITQVRSKIGGKQNQRDSLRSLGLKRIGDVVVKEDRPEIRGMVTVVTHLVTVE 57


>tr|C5VF11|C5VF11_9CORY Tax_Id=553207 (rpmD)SubName:
          Full=Ribosomal protein L30;[Corynebacterium matruchotii
          ATCC 14266]
          Length = 61

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 32/59 (54%), Positives = 43/59 (72%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQ +  +G   KQR+++++LGLRRI HSV+R+D    RG+I VVRHLV VE   G
Sbjct: 2  ALKITQKKGLVGANPKQRKNMQSLGLRRINHSVVRQDTPIVRGMIQVVRHLVVVEEVAG 60


>tr|C0E0G9|C0E0G9_9CORY Tax_Id=566549 SubName: Full=Putative
          uncharacterized protein;[Corynebacterium matruchotii
          ATCC 33806]
          Length = 61

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 32/59 (54%), Positives = 43/59 (72%)

Query: 3  SLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVEPATG 61
          +LKITQ +  +G   KQR+++++LGLRRI HSV+R+D    RG+I VVRHLV VE   G
Sbjct: 2  ALKITQKKGLVGANPKQRKNMQSLGLRRINHSVVRQDTPIVRGMIQVVRHLVVVEEVAG 60


>tr|C7Q2N9|C7Q2N9_CATAD Tax_Id=479433 SubName: Full=Ribosomal
          protein L30;[Catenulispora acidiphila]
          Length = 60

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 32/57 (56%), Positives = 43/57 (75%)

Query: 1  MASLKITQVRSTIGVRWKQRESLRTLGLRRIRHSVIREDNLQTRGLIAVVRHLVEVE 57
          MA LKITQ RS IG +   R++LR+LGL+RI  +V++ED  Q RG++  VRHLV+VE
Sbjct: 1  MARLKITQTRSKIGTKQNHRDTLRSLGLKRINDTVVKEDLPQFRGMVHTVRHLVKVE 57


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.320    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 499,634,782
Number of extensions: 15339968
Number of successful extensions: 31664
Number of sequences better than 10.0: 1398
Number of HSP's gapped: 31748
Number of HSP's successfully gapped: 1398
Length of query: 71
Length of database: 3,808,957,724
Length adjustment: 43
Effective length of query: 28
Effective length of database: 3,329,365,222
Effective search space: 93222226216
Effective search space used: 93222226216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)