BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML1906c (228 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q9CBK0|NUSG_MYCLE Tax_Id=1769 (nusG)RecName: Full=Transcripti... 384 e-105 tr|B8ZSD7|B8ZSD7_MYCLB Tax_Id=561304 (nusG)RecName: Full=Transcr... 384 e-105 sp|P65589|NUSG_MYCTU Tax_Id=1773 (nusG)RecName: Full=Transcripti... 340 9e-92 sp|P65590|NUSG_MYCBO Tax_Id=1765 (nusG)RecName: Full=Transcripti... 340 9e-92 tr|C6DU18|C6DU18_MYCTK Tax_Id=478434 RecName: Full=Transcription... 340 9e-92 tr|C1AKX2|C1AKX2_MYCBT Tax_Id=561275 (nusG)RecName: Full=Transcr... 340 9e-92 tr|A5U024|A5U024_MYCTA Tax_Id=419947 (nusG)RecName: Full=Transcr... 340 9e-92 tr|A1KGB9|A1KGB9_MYCBP Tax_Id=410289 (nusG)RecName: Full=Transcr... 340 9e-92 tr|A5WK06|A5WK06_MYCTF Tax_Id=336982 RecName: Full=Transcription... 340 9e-92 tr|A4KEW7|A4KEW7_MYCTU Tax_Id=395095 RecName: Full=Transcription... 340 9e-92 tr|A2VFV8|A2VFV8_MYCTU Tax_Id=348776 RecName: Full=Transcription... 340 9e-92 tr|Q73SG3|Q73SG3_MYCPA Tax_Id=1770 (nusG)RecName: Full=Transcrip... 337 8e-91 tr|A0QL68|A0QL68_MYCA1 Tax_Id=243243 (nusG)RecName: Full=Transcr... 337 8e-91 tr|B2HSH0|B2HSH0_MYCMM Tax_Id=216594 (nusG)RecName: Full=Transcr... 333 9e-90 tr|A0PM06|A0PM06_MYCUA Tax_Id=362242 (nusG)RecName: Full=Transcr... 333 9e-90 tr|A4T1M3|A4T1M3_MYCGI Tax_Id=350054 RecName: Full=Transcription... 320 6e-86 tr|A1T4G9|A1T4G9_MYCVP Tax_Id=350058 RecName: Full=Transcription... 315 2e-84 tr|A0QS44|A0QS44_MYCS2 Tax_Id=246196 RecName: Full=Transcription... 315 2e-84 tr|Q1BDJ7|Q1BDJ7_MYCSS Tax_Id=164756 RecName: Full=Transcription... 313 7e-84 tr|A1UBE5|A1UBE5_MYCSK Tax_Id=189918 RecName: Full=Transcription... 313 7e-84 tr|A3PV32|A3PV32_MYCSJ Tax_Id=164757 RecName: Full=Transcription... 312 2e-83 tr|Q0SF95|Q0SF95_RHOSR Tax_Id=101510 RecName: Full=Transcription... 308 3e-82 tr|C1AYX7|C1AYX7_RHOOB Tax_Id=632772 (nusG)RecName: Full=Transcr... 308 3e-82 tr|B1MH87|B1MH87_MYCA9 Tax_Id=561007 RecName: Full=Transcription... 306 1e-81 tr|Q5YPC3|Q5YPC3_NOCFA Tax_Id=37329 (nusG)RecName: Full=Transcri... 302 2e-80 tr|C0ZV29|C0ZV29_RHOE4 Tax_Id=234621 (nusG)RecName: Full=Transcr... 298 2e-79 tr|C3JJT1|C3JJT1_RHOER Tax_Id=596309 RecName: Full=Transcription... 298 2e-79 tr|C2ALA5|C2ALA5_TSUPA Tax_Id=521096 RecName: Full=Transcription... 293 1e-77 tr|D0L4W7|D0L4W7_9ACTO Tax_Id=526226 SubName: Full=Transcription... 288 2e-76 tr|C6WN74|C6WN74_ACTMD Tax_Id=446462 RecName: Full=Transcription... 284 6e-75 tr|A4FPR1|A4FPR1_SACEN Tax_Id=405948 (nusG)RecName: Full=Transcr... 281 4e-74 tr|C7MTH0|C7MTH0_SACVD Tax_Id=471857 RecName: Full=Transcription... 280 9e-74 tr|C0U8J5|C0U8J5_9ACTO Tax_Id=526225 RecName: Full=Transcription... 266 1e-69 tr|C8XBG0|C8XBG0_NAKMY Tax_Id=479431 SubName: Full=NusG antiterm... 264 6e-69 tr|C4ECQ8|C4ECQ8_STRRS Tax_Id=479432 RecName: Full=Transcription... 258 3e-67 tr|C2A3X8|C2A3X8_THECU Tax_Id=471852 RecName: Full=Transcription... 258 5e-67 tr|Q47LI0|Q47LI0_THEFY Tax_Id=269800 RecName: Full=Transcription... 255 2e-66 tr|C9KDQ6|C9KDQ6_9MICO Tax_Id=446469 SubName: Full=Transcription... 252 2e-65 tr|A0LRK8|A0LRK8_ACIC1 Tax_Id=351607 RecName: Full=Transcription... 249 2e-64 tr|A3TH76|A3TH76_9MICO Tax_Id=313589 RecName: Full=Transcription... 243 9e-63 tr|A8LC69|A8LC69_FRASN Tax_Id=298653 RecName: Full=Transcription... 243 2e-62 tr|Q0RRT7|Q0RRT7_FRAAA Tax_Id=326424 (nusG)RecName: Full=Transcr... 242 3e-62 tr|C0VB91|C0VB91_9MICO Tax_Id=446471 RecName: Full=Transcription... 242 3e-62 tr|C1YIW7|C1YIW7_NOCDA Tax_Id=446468 RecName: Full=Transcription... 241 4e-62 tr|C1RPX5|C1RPX5_9CELL Tax_Id=446466 RecName: Full=Transcription... 241 4e-62 tr|Q2JFJ0|Q2JFJ0_FRASC Tax_Id=106370 RecName: Full=Transcription... 239 1e-61 tr|A8M544|A8M544_SALAI Tax_Id=391037 RecName: Full=Transcription... 238 5e-61 tr|C4RBQ4|C4RBQ4_9ACTO Tax_Id=219305 RecName: Full=Transcription... 237 6e-61 tr|A4XBR1|A4XBR1_SALTO Tax_Id=369723 RecName: Full=Transcription... 237 8e-61 tr|C5C0L0|C5C0L0_BEUC1 Tax_Id=471853 RecName: Full=Transcription... 235 2e-60 >sp|Q9CBK0|NUSG_MYCLE Tax_Id=1769 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium leprae] Length = 228 Score = 384 bits (987), Expect = e-105 Identities = 200/228 (87%), Positives = 201/228 (88%) Query: 1 VQEAGIDEFAAGGGHXXXXXXXXXXXXLKAELRSKPGDWYVIHSYAGYENKVKANLETRV 60 +QEAGIDEFAAGGGH LKAELRSKPGDWYVIHSYAGYENKVKANLETRV Sbjct: 1 MQEAGIDEFAAGGGHVEPAAEVDPAAALKAELRSKPGDWYVIHSYAGYENKVKANLETRV 60 Query: 61 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT 120 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT Sbjct: 61 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT 120 Query: 121 GFVGATSRPSALALDDVVKFLLPSGSAKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGES 180 GFVGATSRPSALALDDVVKFLLPSGSAKKD LERSIIEVDYEVGES Sbjct: 121 GFVGATSRPSALALDDVVKFLLPSGSAKKDAKGAVSTAAAAEAGGLERSIIEVDYEVGES 180 Query: 181 VTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI 228 VTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI Sbjct: 181 VTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI 228 >tr|B8ZSD7|B8ZSD7_MYCLB Tax_Id=561304 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium leprae] Length = 228 Score = 384 bits (987), Expect = e-105 Identities = 200/228 (87%), Positives = 201/228 (88%) Query: 1 VQEAGIDEFAAGGGHXXXXXXXXXXXXLKAELRSKPGDWYVIHSYAGYENKVKANLETRV 60 +QEAGIDEFAAGGGH LKAELRSKPGDWYVIHSYAGYENKVKANLETRV Sbjct: 1 MQEAGIDEFAAGGGHVEPAAEVDPAAALKAELRSKPGDWYVIHSYAGYENKVKANLETRV 60 Query: 61 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT 120 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT Sbjct: 61 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT 120 Query: 121 GFVGATSRPSALALDDVVKFLLPSGSAKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGES 180 GFVGATSRPSALALDDVVKFLLPSGSAKKD LERSIIEVDYEVGES Sbjct: 121 GFVGATSRPSALALDDVVKFLLPSGSAKKDAKGAVSTAAAAEAGGLERSIIEVDYEVGES 180 Query: 181 VTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI 228 VTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI Sbjct: 181 VTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI 228 >sp|P65589|NUSG_MYCTU Tax_Id=1773 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >sp|P65590|NUSG_MYCBO Tax_Id=1765 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium bovis] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|C6DU18|C6DU18_MYCTK Tax_Id=478434 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|C1AKX2|C1AKX2_MYCBT Tax_Id=561275 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium bovis] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|A5U024|A5U024_MYCTA Tax_Id=419947 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|A1KGB9|A1KGB9_MYCBP Tax_Id=410289 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium bovis] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|A5WK06|A5WK06_MYCTF Tax_Id=336982 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|A4KEW7|A4KEW7_MYCTU Tax_Id=395095 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis str. Haarlem] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|A2VFV8|A2VFV8_MYCTU Tax_Id=348776 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis C] Length = 238 Score = 340 bits (871), Expect = 9e-92 Identities = 174/201 (86%), Positives = 179/201 (89%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLP GS Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGST 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K LER ++EVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV Sbjct: 158 RKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 217 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF QVSKI Sbjct: 218 LVSIFGRETPVELTFGQVSKI 238 >tr|Q73SG3|Q73SG3_MYCPA Tax_Id=1770 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium paratuberculosis] Length = 256 Score = 337 bits (863), Expect = 8e-91 Identities = 174/201 (86%), Positives = 178/201 (88%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 56 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 115 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL+LDDVVKFLLP G+ Sbjct: 116 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALSLDDVVKFLLPRGAT 175 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK LER IEVDYEVGESVTVMDGPFATLPATISEVN EQQKLKV Sbjct: 176 KKVAKGAASTAAAAEAGGLERPAIEVDYEVGESVTVMDGPFATLPATISEVNGEQQKLKV 235 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTFSQVSK+ Sbjct: 236 LVSIFGRETPVELTFSQVSKL 256 >tr|A0QL68|A0QL68_MYCA1 Tax_Id=243243 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium avium] Length = 256 Score = 337 bits (863), Expect = 8e-91 Identities = 174/201 (86%), Positives = 178/201 (88%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 56 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 115 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL+LDDVVKFLLP G+ Sbjct: 116 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALSLDDVVKFLLPRGAT 175 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK LER IEVDYEVGESVTVMDGPFATLPATISEVN EQQKLKV Sbjct: 176 KKVAKGAASTAAAAEAGGLERPAIEVDYEVGESVTVMDGPFATLPATISEVNGEQQKLKV 235 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTFSQVSK+ Sbjct: 236 LVSIFGRETPVELTFSQVSKL 256 >tr|B2HSH0|B2HSH0_MYCMM Tax_Id=216594 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium marinum] Length = 237 Score = 333 bits (854), Expect = 9e-90 Identities = 172/201 (85%), Positives = 180/201 (89%), Gaps = 1/201 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPG+WYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL LDDVVKFLLP G+A Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRGAA 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK LER ++EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKV Sbjct: 158 KK-TAKAASTAAVAEAGGLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKV 216 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF+QVSKI Sbjct: 217 LVSIFGRETPVELTFNQVSKI 237 >tr|A0PM06|A0PM06_MYCUA Tax_Id=362242 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium ulcerans] Length = 237 Score = 333 bits (854), Expect = 9e-90 Identities = 172/201 (85%), Positives = 180/201 (89%), Gaps = 1/201 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKAELRSKPG+WYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL LDDVVKFLLP G+A Sbjct: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRGAA 157 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK LER ++EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKV Sbjct: 158 KK-TAKAASTAAVAEAGGLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKV 216 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF+QVSKI Sbjct: 217 LVSIFGRETPVELTFNQVSKI 237 >tr|A4T1M3|A4T1M3_MYCGI Tax_Id=350054 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium gilvum] Length = 272 Score = 320 bits (821), Expect = 6e-86 Identities = 164/201 (81%), Positives = 174/201 (86%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LK ELR KPGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 72 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 131 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP +A Sbjct: 132 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 191 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK ER +IEVD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLKV Sbjct: 192 KKPGKATAASTAAAEVGATERPVIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKLKV 251 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVELTF+QV+KI Sbjct: 252 LVSIFGRETPVELTFNQVAKI 272 >tr|A1T4G9|A1T4G9_MYCVP Tax_Id=350058 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium vanbaalenii] Length = 266 Score = 315 bits (807), Expect = 2e-84 Identities = 163/203 (80%), Positives = 175/203 (86%), Gaps = 2/203 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LK ELR KPG+WYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 64 LKMELRLKPGEWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 123 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP +A Sbjct: 124 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 183 Query: 148 KK--DXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKL 205 KK +ER +IEVD+EVGESVTVMDGPFATLPA+ISEVNAEQQKL Sbjct: 184 KKPGKAATSAAAAASSEAGGIERPVIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKL 243 Query: 206 KVLVSIFGRETPVELTFSQVSKI 228 KVLVSIFGRETPVELTF+QV+KI Sbjct: 244 KVLVSIFGRETPVELTFNQVAKI 266 >tr|A0QS44|A0QS44_MYCS2 Tax_Id=246196 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium smegmatis] Length = 280 Score = 315 bits (807), Expect = 2e-84 Identities = 165/202 (81%), Positives = 174/202 (86%), Gaps = 1/202 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LK ELR KPGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 79 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 138 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP G+A Sbjct: 139 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPQGAA 198 Query: 148 KK-DXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 KK LER I VD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLK Sbjct: 199 KKPGKAAAAAASAASTEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 258 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVELTF+QV+KI Sbjct: 259 VLVSIFGRETPVELTFNQVAKI 280 >tr|Q1BDJ7|Q1BDJ7_MYCSS Tax_Id=164756 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium sp.] Length = 270 Score = 313 bits (803), Expect = 7e-84 Identities = 165/202 (81%), Positives = 173/202 (85%), Gaps = 1/202 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LK ELR KPGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 69 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 128 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP +A Sbjct: 129 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 188 Query: 148 KK-DXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 KK LER I VD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLK Sbjct: 189 KKPGKAASTAAGAASSEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 248 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVELTF+QVSKI Sbjct: 249 VLVSIFGRETPVELTFNQVSKI 270 >tr|A1UBE5|A1UBE5_MYCSK Tax_Id=189918 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium sp.] Length = 270 Score = 313 bits (803), Expect = 7e-84 Identities = 165/202 (81%), Positives = 173/202 (85%), Gaps = 1/202 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LK ELR KPGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 69 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 128 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP +A Sbjct: 129 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 188 Query: 148 KK-DXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 KK LER I VD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLK Sbjct: 189 KKPGKAASTAAGAASSEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 248 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVELTF+QVSKI Sbjct: 249 VLVSIFGRETPVELTFNQVSKI 270 >tr|A3PV32|A3PV32_MYCSJ Tax_Id=164757 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium sp.] Length = 271 Score = 312 bits (800), Expect = 2e-83 Identities = 164/202 (81%), Positives = 173/202 (85%), Gaps = 1/202 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LK ELR +PGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 70 LKKELRLRPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 129 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP +A Sbjct: 130 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 189 Query: 148 KK-DXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 KK LER I VD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLK Sbjct: 190 KKPGKAASTAAGAASSEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 249 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVELTF+QVSKI Sbjct: 250 VLVSIFGRETPVELTFNQVSKI 271 >tr|Q0SF95|Q0SF95_RHOSR Tax_Id=101510 RecName: Full=Transcription antitermination protein nusG;[Rhodococcus sp.] Length = 264 Score = 308 bits (789), Expect = 3e-82 Identities = 157/201 (78%), Positives = 169/201 (84%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKA LR PGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 64 LKAALRRAPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 123 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDL D+SW AVRNTPGVTGFVGATSRPS L L++V+KFLLP Sbjct: 124 KQVNRKVLPGYILVRMDLNDESWGAVRNTPGVTGFVGATSRPSPLTLNEVIKFLLPQQEQ 183 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK + +IEVD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLKV Sbjct: 184 KKQAAAATVSAGETGGESFAKPLIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKLKV 243 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL+F+QV+KI Sbjct: 244 LVSIFGRETPVELSFTQVAKI 264 >tr|C1AYX7|C1AYX7_RHOOB Tax_Id=632772 (nusG)RecName: Full=Transcription antitermination protein nusG;[Rhodococcus opacus] Length = 288 Score = 308 bits (789), Expect = 3e-82 Identities = 157/201 (78%), Positives = 169/201 (84%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKA LR PGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 88 LKAALRRAPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 147 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDL D+SW AVRNTPGVTGFVGATSRPS L L++V+KFLLP Sbjct: 148 KQVNRKVLPGYILVRMDLNDESWGAVRNTPGVTGFVGATSRPSPLTLNEVIKFLLPQQEQ 207 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK + +IEVD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLKV Sbjct: 208 KKQAAAATVSAGETGGETFAKPLIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKLKV 267 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL+F+QV+KI Sbjct: 268 LVSIFGRETPVELSFTQVAKI 288 >tr|B1MH87|B1MH87_MYCA9 Tax_Id=561007 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium abscessus] Length = 264 Score = 306 bits (784), Expect = 1e-81 Identities = 157/205 (76%), Positives = 172/205 (83%), Gaps = 4/205 (1%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKA+LR +PG+WYVIHSYAGYENKVKANL+TRVQNLDVGD IFQ+EVPTEEVTEIKNGQR Sbjct: 60 LKAQLRREPGEWYVIHSYAGYENKVKANLQTRVQNLDVGDYIFQIEVPTEEVTEIKNGQR 119 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP A Sbjct: 120 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPQAPA 179 Query: 148 KKD----XXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQ 203 KK LER +IEVD+EVGESVTV DGPFATLPA+ISEVNAEQQ Sbjct: 180 KKPAKGAASADAATASSSEPGGLERPVIEVDFEVGESVTVTDGPFATLPASISEVNAEQQ 239 Query: 204 KLKVLVSIFGRETPVELTFSQVSKI 228 +LKVLVSIFGRETPVEL F+QV K+ Sbjct: 240 RLKVLVSIFGRETPVELNFTQVEKL 264 >tr|Q5YPC3|Q5YPC3_NOCFA Tax_Id=37329 (nusG)RecName: Full=Transcription antitermination protein nusG;[Nocardia farcinica] Length = 273 Score = 302 bits (773), Expect = 2e-80 Identities = 154/201 (76%), Positives = 168/201 (83%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 +KA LR PGDWYVIHSYAGYENKVKANLETRVQNLD+ D IFQVEVPTEEVTEIKNGQR Sbjct: 73 MKAALRRAPGDWYVIHSYAGYENKVKANLETRVQNLDLEDYIFQVEVPTEEVTEIKNGQR 132 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L++DDVVKFL+P+ Sbjct: 133 KNVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSIDDVVKFLVPASQQ 192 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 KK + IEVD+EVGESVTVMDGPFATLPA+ISEVNAEQQKLKV Sbjct: 193 KKAPAAAAAASTETSTDVAPKPAIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKLKV 252 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL F+QV+KI Sbjct: 253 LVSIFGRETPVELAFTQVAKI 273 >tr|C0ZV29|C0ZV29_RHOE4 Tax_Id=234621 (nusG)RecName: Full=Transcription antitermination protein nusG;[Rhodococcus erythropolis] Length = 278 Score = 298 bits (764), Expect = 2e-79 Identities = 155/202 (76%), Positives = 166/202 (82%), Gaps = 1/202 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKA LR PGDWYVIHSYAGYENKVK NLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 77 LKAALRRAPGDWYVIHSYAGYENKVKTNLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 136 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L L++VVKFLLP Sbjct: 137 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLTLNEVVKFLLPQQEQ 196 Query: 148 KK-DXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 KK + +IEVD+EVGESVTVMDGPFATLPA+ISEVN EQQKLK Sbjct: 197 KKQQAAAAAVAAGEAPSESFGKPLIEVDFEVGESVTVMDGPFATLPASISEVNGEQQKLK 256 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVEL F+QV+KI Sbjct: 257 VLVSIFGRETPVELNFNQVAKI 278 >tr|C3JJT1|C3JJT1_RHOER Tax_Id=596309 RecName: Full=Transcription antitermination protein nusG;[Rhodococcus erythropolis SK121] Length = 278 Score = 298 bits (764), Expect = 2e-79 Identities = 155/202 (76%), Positives = 166/202 (82%), Gaps = 1/202 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKA LR PGDWYVIHSYAGYENKVK NLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 77 LKAALRRAPGDWYVIHSYAGYENKVKTNLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 136 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L L++VVKFLLP Sbjct: 137 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLTLNEVVKFLLPQQEQ 196 Query: 148 KK-DXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 KK + +IEVD+EVGESVTVMDGPFATLPA+ISEVN EQQKLK Sbjct: 197 KKQQAAAAAVAAGEAPSESFGKPLIEVDFEVGESVTVMDGPFATLPASISEVNGEQQKLK 256 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVEL F+QV+KI Sbjct: 257 VLVSIFGRETPVELNFNQVAKI 278 >tr|C2ALA5|C2ALA5_TSUPA Tax_Id=521096 RecName: Full=Transcription antitermination protein nusG;[Tsukamurella paurometabola DSM 20162] Length = 276 Score = 293 bits (750), Expect = 1e-77 Identities = 150/205 (73%), Positives = 168/205 (81%), Gaps = 4/205 (1%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 LKA+LR+ PGDWYVIH+YAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQ+ Sbjct: 71 LKAQLRTAPGDWYVIHTYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQQ 130 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGS- 146 + VNRKVLPGYILVRMDL D+SW AVRNTPGVTGFVG TS+PS L +++VVKFLLP + Sbjct: 131 KRVNRKVLPGYILVRMDLNDESWGAVRNTPGVTGFVGLTSKPSPLTMNEVVKFLLPESAR 190 Query: 147 ---AKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQ 203 AK + +EVD+EVGESVTVMDGPFATLPA+ISE+NAEQ+ Sbjct: 191 TKPAKDKGAAADGAAAASGGAVSQGPAVEVDFEVGESVTVMDGPFATLPASISEINAEQR 250 Query: 204 KLKVLVSIFGRETPVELTFSQVSKI 228 KLKVLVSIFGRETPVEL F+QV KI Sbjct: 251 KLKVLVSIFGRETPVELAFNQVEKI 275 >tr|D0L4W7|D0L4W7_9ACTO Tax_Id=526226 SubName: Full=Transcription termination/antitermination factor NusG;[Gordonia bronchialis DSM 43247] Length = 299 Score = 288 bits (738), Expect = 2e-76 Identities = 149/202 (73%), Positives = 165/202 (81%), Gaps = 1/202 (0%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+ +LR PGDWYVIHSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQ Sbjct: 98 LRKQLRRAPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQP 157 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + VNRKVLPGYILVRMDL DDSW AVRNTPGVTGFVG S+PS L+L++V++FL+P A Sbjct: 158 KKVNRKVLPGYILVRMDLNDDSWGAVRNTPGVTGFVGMNSKPSPLSLNEVLQFLMPRTEA 217 Query: 148 KKD-XXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 KK + IEVD+EVGESVTVMDGPFATLPA+ISEVNAEQ+K+K Sbjct: 218 KKPAAAKGAGAEGVEAAAAAATATIEVDFEVGESVTVMDGPFATLPASISEVNAEQRKVK 277 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVEL F+QV KI Sbjct: 278 VLVSIFGRETPVELAFNQVEKI 299 >tr|C6WN74|C6WN74_ACTMD Tax_Id=446462 RecName: Full=Transcription antitermination protein nusG;[Actinosynnema mirum] Length = 266 Score = 284 bits (726), Expect = 6e-75 Identities = 145/201 (72%), Positives = 163/201 (81%), Gaps = 7/201 (3%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 ++ LR PGDWYV+HSYAGYENKVK NLETR+Q LD+ D IFQVEVPTEEVTEIKNGQR Sbjct: 73 MREALRRAPGDWYVVHSYAGYENKVKTNLETRIQTLDMEDYIFQVEVPTEEVTEIKNGQR 132 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 + V RKVLPGYILVRM+L D SW+AVRNTPGVTGFVGATS+PS L +D+V+KFLLP G Sbjct: 133 KQVQRKVLPGYILVRMELNDGSWSAVRNTPGVTGFVGATSKPSPLTVDEVLKFLLPQGKQ 192 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 + +S +EVD+EVGESVTVMDGPFATLPATISEVNA+ QKLKV Sbjct: 193 EPAAGKKAATTPV-------KSTVEVDFEVGESVTVMDGPFATLPATISEVNADGQKLKV 245 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL+FSQVSKI Sbjct: 246 LVSIFGRETPVELSFSQVSKI 266 >tr|A4FPR1|A4FPR1_SACEN Tax_Id=405948 (nusG)RecName: Full=Transcription antitermination protein nusG;[Saccharopolyspora erythraea] Length = 283 Score = 281 bits (719), Expect = 4e-74 Identities = 143/201 (71%), Positives = 162/201 (80%), Gaps = 4/201 (1%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+A LR PG+WYV+HSYAGYENKVK NLETR Q LDV D IFQVEVPTEEVTEIKNGQR Sbjct: 87 LRAALRRAPGEWYVVHSYAGYENKVKTNLETRAQTLDVEDYIFQVEVPTEEVTEIKNGQR 146 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 +LV RKVLPGYILVRM+L D SW+AVRNTPGVTGF+GATS PS L++DDV+KFL P Sbjct: 147 KLVQRKVLPGYILVRMELNDASWSAVRNTPGVTGFIGATSHPSPLSIDDVLKFLAP---- 202 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 + + + +EVD+EVGES+TVMDGPFATLPATISEVNA+ QKLKV Sbjct: 203 RAEKEAKPEAGKKAAAPAAAKPSVEVDFEVGESITVMDGPFATLPATISEVNADAQKLKV 262 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL+F+QVSKI Sbjct: 263 LVSIFGRETPVELSFNQVSKI 283 >tr|C7MTH0|C7MTH0_SACVD Tax_Id=471857 RecName: Full=Transcription antitermination protein nusG;[Saccharomonospora viridis] Length = 267 Score = 280 bits (716), Expect = 9e-74 Identities = 144/201 (71%), Positives = 163/201 (81%), Gaps = 3/201 (1%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+AEL S PGDWYV+HSYAGYEN+VK+N+ETR Q LDV D IFQVEVPTEEVTEIKNGQR Sbjct: 70 LRAELESLPGDWYVVHSYAGYENRVKSNIETRRQTLDVEDYIFQVEVPTEEVTEIKNGQR 129 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 ++V RKVLPGYILVRM++ D SW+AVRNTPGVTGFVGATSRPS L+LD+VVKFL P Sbjct: 130 KIVQRKVLPGYILVRMEMNDASWSAVRNTPGVTGFVGATSRPSPLSLDEVVKFLAPK--- 186 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 + + +EVD+EVGESVTVMDGPFATLPATISEVN + QKLKV Sbjct: 187 VEKAAPAKAKGEPAAEEQVAAGPVEVDFEVGESVTVMDGPFATLPATISEVNVDAQKLKV 246 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL+F+QVSKI Sbjct: 247 LVSIFGRETPVELSFNQVSKI 267 >tr|C0U8J5|C0U8J5_9ACTO Tax_Id=526225 RecName: Full=Transcription antitermination protein nusG;[Geodermatophilus obscurus DSM 43160] Length = 297 Score = 266 bits (680), Expect = 1e-69 Identities = 136/201 (67%), Positives = 159/201 (79%), Gaps = 5/201 (2%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 ++ LRS+ GDWYVIHSYAGYENKVK NLE+R+Q+LD+ D IFQ+EVPTEEVTEIKNG+R Sbjct: 102 MRKVLRSQFGDWYVIHSYAGYENKVKTNLESRIQSLDMEDYIFQIEVPTEEVTEIKNGKR 161 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 VNRK LPGY+LVRMDL D+SW AVRNTPGVTGFVGATSRPS L++D+VV L P+ + Sbjct: 162 TQVNRKKLPGYLLVRMDLNDESWGAVRNTPGVTGFVGATSRPSPLSIDEVVSLLAPAATP 221 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 + VD+EVGESVTVMDGPFATLPATI+E+NAEQQKL+V Sbjct: 222 Q-----AARTTETTSTTTAAAPTTVVDFEVGESVTVMDGPFATLPATINEINAEQQKLQV 276 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL+F+QV KI Sbjct: 277 LVSIFGRETPVELSFNQVQKI 297 >tr|C8XBG0|C8XBG0_NAKMY Tax_Id=479431 SubName: Full=NusG antitermination factor;[Nakamurella multipartita] Length = 306 Score = 264 bits (674), Expect = 6e-69 Identities = 136/202 (67%), Positives = 159/202 (78%), Gaps = 9/202 (4%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L++ L+ G+WYV+HSYAGYENKVK NLETR+++LD+ D IFQ+EVPTEEVTEIKNGQR Sbjct: 113 LRSALKRAAGEWYVVHSYAGYENKVKTNLETRIKSLDMEDYIFQIEVPTEEVTEIKNGQR 172 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATS-RPSALALDDVVKFLLPSGS 146 + V RKV PGYILVRMDLTD SW+AVRNTPGVTGFVGAT+ +PSAL +D+VVK L P+ Sbjct: 173 KQVQRKVYPGYILVRMDLTDQSWSAVRNTPGVTGFVGATAQKPSALTIDEVVKILTPTAP 232 Query: 147 AKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 K EVD+ +GESVTVMDGPFATLPATI+EVNA+ QKLK Sbjct: 233 RKPASVATTPGSAPVR--------TEVDFSIGESVTVMDGPFATLPATINEVNADAQKLK 284 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVEL+FSQV+KI Sbjct: 285 VLVSIFGRETPVELSFSQVAKI 306 >tr|C4ECQ8|C4ECQ8_STRRS Tax_Id=479432 RecName: Full=Transcription antitermination protein nusG;[Streptosporangium roseum DSM 43021] Length = 266 Score = 258 bits (660), Expect = 3e-67 Identities = 129/200 (64%), Positives = 160/200 (80%), Gaps = 12/200 (6%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 K +LRS+ G+WYVIHSYAGYEN+VK+N+ETR Q+L++ D IFQVEVPT VTE+K+G+R+ Sbjct: 79 KRQLRSQFGEWYVIHSYAGYENRVKSNIETRTQSLNMEDYIFQVEVPTHHVTEVKSGKRQ 138 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 LV +VLPGY+LVRMDLTD+SW+AVRNTPGVTGFVG +++PS L+LD+V K L P S + Sbjct: 139 LVKERVLPGYVLVRMDLTDESWSAVRNTPGVTGFVGLSNKPSPLSLDEVAKLLAPEPSEE 198 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVL 208 + S VD+E+GESVTVMDGPFATLPAT+SE++AE QKLKVL Sbjct: 199 ------------VKKSTAKASAATVDFEIGESVTVMDGPFATLPATVSEISAESQKLKVL 246 Query: 209 VSIFGRETPVELTFSQVSKI 228 VSIFGRETPVEL+F+QVSKI Sbjct: 247 VSIFGRETPVELSFNQVSKI 266 >tr|C2A3X8|C2A3X8_THECU Tax_Id=471852 RecName: Full=Transcription antitermination protein nusG;[Thermomonospora curvata DSM 43183] Length = 238 Score = 258 bits (658), Expect = 5e-67 Identities = 131/200 (65%), Positives = 155/200 (77%), Gaps = 11/200 (5%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 K ELR PG+WYV+HSYAGYEN+VKAN+ETR Q+L++ D IFQVEVP EVTEIK G+R+ Sbjct: 50 KRELRMLPGEWYVVHSYAGYENRVKANIETRTQSLNMEDYIFQVEVPQHEVTEIKQGKRQ 109 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 VN K+LPGYILVRM+LTD+SWAAVRNTPGVTGFVG ++PS L+LD+V K L P + Sbjct: 110 KVNEKMLPGYILVRMELTDESWAAVRNTPGVTGFVGLLNKPSPLSLDEVAKLLAPPPEEE 169 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVL 208 K + V++EVGESVTVMDGPF TLPAT+SE+N EQQKLKVL Sbjct: 170 KGKAKEQ-----------TKVTSTVEFEVGESVTVMDGPFQTLPATVSEINVEQQKLKVL 218 Query: 209 VSIFGRETPVELTFSQVSKI 228 VSIFGRETPVEL+F+QVSKI Sbjct: 219 VSIFGRETPVELSFNQVSKI 238 >tr|Q47LI0|Q47LI0_THEFY Tax_Id=269800 RecName: Full=Transcription antitermination protein nusG;[Thermobifida fusca] Length = 250 Score = 255 bits (652), Expect = 2e-66 Identities = 128/200 (64%), Positives = 157/200 (78%), Gaps = 11/200 (5%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 KAELR PG+WYV+H+YAGYEN+VKANLE R Q+L++ D IFQVEVPT+EVTE+K+G+R+ Sbjct: 62 KAELRLLPGEWYVVHTYAGYENRVKANLENRTQSLNMEDYIFQVEVPTQEVTEVKSGKRQ 121 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 V KVLPGY+LVRM+LTD+SWAAVR+TPGVTGFVG ++RP L+LD+V + L P + Sbjct: 122 QVTEKVLPGYVLVRMELTDESWAAVRHTPGVTGFVGLSNRPVPLSLDEVAELLAPEPETE 181 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVL 208 ++ EV+YE+GESVTVMDGPFATLPAT+SEVN + QKLKVL Sbjct: 182 EEQAKKEAEPRG-----------EVEYEIGESVTVMDGPFATLPATVSEVNPDTQKLKVL 230 Query: 209 VSIFGRETPVELTFSQVSKI 228 VSIFGRETPVEL F+QVSKI Sbjct: 231 VSIFGRETPVELGFNQVSKI 250 >tr|C9KDQ6|C9KDQ6_9MICO Tax_Id=446469 SubName: Full=Transcription antitermination protein nusG;[Sanguibacter keddieii DSM 10542] Length = 273 Score = 252 bits (643), Expect = 2e-65 Identities = 135/228 (59%), Positives = 159/228 (69%), Gaps = 9/228 (3%) Query: 1 VQEAGIDEFAAGGGHXXXXXXXXXXXXLKAELRSKPGDWYVIHSYAGYENKVKANLETRV 60 V E+ DE A+ K ELRSKPGDWYVIHSYAGYEN+VKANLE R+ Sbjct: 55 VTESPADESASDAEASVDDEDEDPVESFKRELRSKPGDWYVIHSYAGYENRVKANLENRI 114 Query: 61 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT 120 Q+L++ D IFQ+EVP EEVTEIKN Q+++V R +PGY+LVRMDLTD+SW AVR+TPGVT Sbjct: 115 QSLNMEDYIFQIEVPMEEVTEIKNAQKKIVRRVRIPGYVLVRMDLTDESWGAVRHTPGVT 174 Query: 121 GFVGATSRPSALALDDVVKFLLPSGSAKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGES 180 GFVG T +P L ++V L P + K + IEVD+ VGES Sbjct: 175 GFVGHTHQPVPLTQNEVFGMLAPLIAPKAEAGAKGSG---------SAPAIEVDFTVGES 225 Query: 181 VTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI 228 VTV DGPF TLPATISE+NAE QKLKVLVSIFGRETPVEL+FSQV+KI Sbjct: 226 VTVTDGPFDTLPATISEINAEGQKLKVLVSIFGRETPVELSFSQVAKI 273 >tr|A0LRK8|A0LRK8_ACIC1 Tax_Id=351607 RecName: Full=Transcription antitermination protein nusG;[Acidothermus cellulolyticus] Length = 228 Score = 249 bits (636), Expect = 2e-64 Identities = 124/202 (61%), Positives = 157/202 (77%), Gaps = 14/202 (6%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+ +LR PG WYV+H+YAGYEN+ KANLE R+Q+L++ D I+QVEVP EEV EIKNG+R Sbjct: 40 LRRQLRDAPGQWYVVHTYAGYENRAKANLENRIQSLNMEDYIYQVEVPQEEVVEIKNGKR 99 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVG-ATSRPSALALDDVVKFLLPSGS 146 ++V R + PGY+LVRM+LTD+SWAAVR TP VTGFVG + S+P+ L LD+V++FL P+ Sbjct: 100 QIVKRNIFPGYVLVRMELTDESWAAVRYTPAVTGFVGPSASKPAPLTLDEVLRFLAPAVK 159 Query: 147 AKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLK 206 ++K+ VD+EVGESVTVMDGPFATLPATISE+N +QQKLK Sbjct: 160 SRKEAAAAATPKI-------------VDFEVGESVTVMDGPFATLPATISEINPDQQKLK 206 Query: 207 VLVSIFGRETPVELTFSQVSKI 228 VLVSIFGRETPVEL+F+QV+KI Sbjct: 207 VLVSIFGRETPVELSFNQVAKI 228 >tr|A3TH76|A3TH76_9MICO Tax_Id=313589 RecName: Full=Transcription antitermination protein nusG;[Janibacter sp. HTCC2649] Length = 316 Score = 243 bits (621), Expect = 9e-63 Identities = 125/200 (62%), Positives = 152/200 (76%), Gaps = 1/200 (0%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 K +L SK GDWYVIHSYAGYEN+VK NLETR+Q+L++ D IF++EVP EEVTEIK GQR+ Sbjct: 118 KEDLASKFGDWYVIHSYAGYENRVKTNLETRIQSLNMEDFIFEIEVPMEEVTEIKGGQRK 177 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 LV R +PGY++VRMDLTD+SW AVR+TPGVTGFVG +P L+LD+V + P+ Sbjct: 178 LVRRVRMPGYVIVRMDLTDESWGAVRHTPGVTGFVGNAHQPVPLSLDEVYTMIKPAELEL 237 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVL 208 ++ + V++EVGESVTVMDGPF TLPATISE+NAE QKLKVL Sbjct: 238 AAAAAAGGGSTGSGAGSASQAPL-VEFEVGESVTVMDGPFETLPATISEINAEGQKLKVL 296 Query: 209 VSIFGRETPVELTFSQVSKI 228 VSIFGRETPVEL+FSQVSK+ Sbjct: 297 VSIFGRETPVELSFSQVSKL 316 >tr|A8LC69|A8LC69_FRASN Tax_Id=298653 RecName: Full=Transcription antitermination protein nusG;[Frankia sp.] Length = 273 Score = 243 bits (619), Expect = 2e-62 Identities = 122/197 (61%), Positives = 148/197 (75%), Gaps = 16/197 (8%) Query: 32 LRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRRLVN 91 L PG+WYV+HSYAGYENKVK NLETR+ +L++ D IFQ+EVPTEEV +KNG+R+LV Sbjct: 93 LEDAPGEWYVVHSYAGYENKVKTNLETRISSLNMEDYIFQIEVPTEEVPVVKNGKRQLVQ 152 Query: 92 RKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAKKDX 151 +K PGYI VRMDLTD SW+AVRNTPGVTGFVG T+RPS L ++VV L P+ +K Sbjct: 153 QKKYPGYIYVRMDLTDQSWSAVRNTPGVTGFVGLTNRPSPLRREEVVSILAPAAPKEKKV 212 Query: 152 XXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSI 211 ++ ++EVGESVTVMDGPFATLPATISE+N + Q+LKVLVSI Sbjct: 213 ----------------ETVKAQEFEVGESVTVMDGPFATLPATISEINLDAQRLKVLVSI 256 Query: 212 FGRETPVELTFSQVSKI 228 FGRETPVEL F+QV+KI Sbjct: 257 FGRETPVELQFNQVAKI 273 >tr|Q0RRT7|Q0RRT7_FRAAA Tax_Id=326424 (nusG)RecName: Full=Transcription antitermination protein nusG;[Frankia alni] Length = 291 Score = 242 bits (617), Expect = 3e-62 Identities = 121/201 (60%), Positives = 150/201 (74%), Gaps = 16/201 (7%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+ + PG+WYV+HSYAGYENKVK NLETR+ +L++ D IFQ+EVPTEEV +KNG+R Sbjct: 107 LRRAIEDAPGEWYVVHSYAGYENKVKTNLETRISSLNMEDYIFQIEVPTEEVPVVKNGKR 166 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 +LV +K PGYI VRMDLTD SW+AVRNTPGVTGFVG T+RPS L ++V+ L P+ Sbjct: 167 QLVQQKKYPGYIYVRMDLTDQSWSAVRNTPGVTGFVGLTNRPSPLRREEVLSILAPAAPK 226 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K ++ ++EVGESVTVMDGPFATLPATISE+N + Q+LKV Sbjct: 227 EKKV----------------ETVRVQEFEVGESVTVMDGPFATLPATISEINLDAQRLKV 270 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL F+QV+KI Sbjct: 271 LVSIFGRETPVELQFNQVAKI 291 >tr|C0VB91|C0VB91_9MICO Tax_Id=446471 RecName: Full=Transcription antitermination protein nusG;[Xylanimonas cellulosilytica DSM 15894] Length = 265 Score = 242 bits (617), Expect = 3e-62 Identities = 125/200 (62%), Positives = 149/200 (74%), Gaps = 4/200 (2%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 K LRS+ GDWYVIHSYAGYEN+VKANLE R+Q+L++ D IFQ+EVP EEVTEIKN Q++ Sbjct: 70 KRTLRSQLGDWYVIHSYAGYENRVKANLENRIQSLNMEDYIFQIEVPMEEVTEIKNAQKK 129 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 V R +PGY+LVRMDLTD+SW AVR+TPGVTGFVG T +P L LD+V L P+ Sbjct: 130 TVRRVRIPGYVLVRMDLTDESWGAVRHTPGVTGFVGHTHQPVPLTLDEVFSMLAPT---- 185 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVL 208 + + + VD+EVGESVTV DGPF TLPATISE+N E QKLKVL Sbjct: 186 MLEAPAAAGKPSTAAAKAKAAAVVVDFEVGESVTVTDGPFDTLPATISEINVEAQKLKVL 245 Query: 209 VSIFGRETPVELTFSQVSKI 228 VSIFGRETPVEL+F+QV+KI Sbjct: 246 VSIFGRETPVELSFNQVAKI 265 >tr|C1YIW7|C1YIW7_NOCDA Tax_Id=446468 RecName: Full=Transcription antitermination protein nusG;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 280 Score = 241 bits (615), Expect = 4e-62 Identities = 119/200 (59%), Positives = 155/200 (77%), Gaps = 5/200 (2%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 K EL PGDWYV+H+YAGYE +VKAN+E+R Q+L++ + IFQVEVP EVTE+K+G+R+ Sbjct: 86 KNELVLLPGDWYVVHTYAGYEKRVKANVESRTQSLNMEEYIFQVEVPEHEVTEVKSGKRQ 145 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 V KVLPGY+LVRMDLTD+SW+A+RNTPGVTGFVG +++P+ L+L +V K L P + Sbjct: 146 QVTEKVLPGYVLVRMDLTDESWSAIRNTPGVTGFVGLSNKPAPLSLTEVAKLLAPEPEVE 205 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVL 208 + + + ++V YEVGESVTVM+GPFATLPAT+SE+N + QKLKVL Sbjct: 206 PE-----QAQQARTAGGVGEARMDVAYEVGESVTVMEGPFATLPATVSEINPDTQKLKVL 260 Query: 209 VSIFGRETPVELTFSQVSKI 228 VSIFGRETPVEL+F+QV+KI Sbjct: 261 VSIFGRETPVELSFNQVAKI 280 >tr|C1RPX5|C1RPX5_9CELL Tax_Id=446466 RecName: Full=Transcription antitermination protein nusG;[Cellulomonas flavigena DSM 20109] Length = 255 Score = 241 bits (615), Expect = 4e-62 Identities = 128/201 (63%), Positives = 148/201 (73%), Gaps = 10/201 (4%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 KA+LR PGDWYVIHSYAGYEN+VKANLE+R Q+L++ D I QVEVP EEV EIKN QR+ Sbjct: 64 KAKLRRLPGDWYVIHSYAGYENRVKANLESRTQSLNMEDYIHQVEVPMEEVVEIKNAQRK 123 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 +V R +PGY+LVRMDLTD+SW AVR+TPGVTGFVG T +P L LD+V L P+ K Sbjct: 124 VVKRVRIPGYVLVRMDLTDESWGAVRHTPGVTGFVGHTHQPVPLTLDEVFSMLAPAIETK 183 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMD-GPFATLPATISEVNAEQQKLKV 207 +EVD+ VGESVTV D GPF TLPATISE+N E QKLKV Sbjct: 184 ---------APAQQAAKASSKPVEVDFTVGESVTVTDGGPFDTLPATISEINPENQKLKV 234 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVS+FGRETPVEL+FSQVSKI Sbjct: 235 LVSLFGRETPVELSFSQVSKI 255 >tr|Q2JFJ0|Q2JFJ0_FRASC Tax_Id=106370 RecName: Full=Transcription antitermination protein nusG;[Frankia sp.] Length = 277 Score = 239 bits (611), Expect = 1e-61 Identities = 121/201 (60%), Positives = 149/201 (74%), Gaps = 16/201 (7%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+ + PG+WYV+HSYAGYENKVK NLETR+ +L++ D IFQ+EVPTEEV +KNG+R Sbjct: 93 LRRAIEDAPGEWYVVHSYAGYENKVKTNLETRISSLNMEDYIFQIEVPTEEVPVVKNGKR 152 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 +LV +K PGYI VRMDLTD SW+AVRNTPGVTGFVG T+RPS L ++V+ L P Sbjct: 153 QLVQQKKYPGYIYVRMDLTDQSWSAVRNTPGVTGFVGLTNRPSPLRREEVLSILAPVVPK 212 Query: 148 KKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 +K ++ ++EVGESVTVMDGPFATLPATISE+N + Q+LKV Sbjct: 213 EKKV----------------ETVRVQEFEVGESVTVMDGPFATLPATISEINLDAQRLKV 256 Query: 208 LVSIFGRETPVELTFSQVSKI 228 LVSIFGRETPVEL F+QV+KI Sbjct: 257 LVSIFGRETPVELQFNQVAKI 277 >tr|A8M544|A8M544_SALAI Tax_Id=391037 RecName: Full=Transcription antitermination protein nusG;[Salinispora arenicola] Length = 242 Score = 238 bits (606), Expect = 5e-61 Identities = 126/231 (54%), Positives = 160/231 (69%), Gaps = 17/231 (7%) Query: 1 VQEAGIDEFAAGGGHXXXXXXXXXXXXLKAELRSKPGDWYVIHSYAGYENKVKANLETRV 60 V+ A E +A L+ +LR PGDWYV+HSYAGYENKVK NLETR+ Sbjct: 26 VEAANEPEISASASEPAEDSEFDPIAELRQKLRYAPGDWYVVHSYAGYENKVKTNLETRI 85 Query: 61 QNLDVGDCIFQVEVPTEEVTEIKNGQRRLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVT 120 +LD+ D I+QVEVPT + E+KNG+R + KV PGYILVRM+LT +S++ VRNTPGVT Sbjct: 86 TSLDMEDYIYQVEVPTRDEVEVKNGKRSQIQAKVFPGYILVRMELTAESYSCVRNTPGVT 145 Query: 121 GFVGAT---SRPSALALDDVVKFLLPSGSAKKDXXXXXXXXXXXXXXXLERSIIEVDYEV 177 GFVGAT RP+ L+LD+V+K+L P+ A + + + +D+EV Sbjct: 146 GFVGATDRADRPAPLSLDEVLKWLAPAVEAVE--------------KKAKPEVKVLDFEV 191 Query: 178 GESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFSQVSKI 228 G+SVTV DG FA+LPATISE+NA+QQKLKVLVSIFGRETPVEL F+QV+KI Sbjct: 192 GDSVTVTDGAFASLPATISEINADQQKLKVLVSIFGRETPVELNFNQVTKI 242 >tr|C4RBQ4|C4RBQ4_9ACTO Tax_Id=219305 RecName: Full=Transcription antitermination protein nusG;[Micromonospora sp. ATCC 39149] Length = 240 Score = 237 bits (605), Expect = 6e-61 Identities = 122/204 (59%), Positives = 154/204 (75%), Gaps = 17/204 (8%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+ +LR PGDWYV+HSYAGYENKVK NLETR+ +LD+ D I+QVEVPT E E+KNG+R Sbjct: 51 LRQKLRYAPGDWYVVHSYAGYENKVKTNLETRITSLDMEDYIYQVEVPTREEVEVKNGKR 110 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGAT---SRPSALALDDVVKFLLPS 144 + KV PGYILVRM+LT +S++ VRNTPGVTGFVGAT RP+ L+LD+V+K+L P+ Sbjct: 111 SQIQAKVFPGYILVRMELTAESYSCVRNTPGVTGFVGATDRADRPAPLSLDEVLKWLAPT 170 Query: 145 GSAKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQK 204 ++ + + +D+EVG+SVTV DG FA+LPATISE+NA+QQK Sbjct: 171 VETEQ--------------KKAKPEVKVLDFEVGDSVTVTDGAFASLPATISEINADQQK 216 Query: 205 LKVLVSIFGRETPVELTFSQVSKI 228 LKVLVSIFGRETPVEL F+QV+KI Sbjct: 217 LKVLVSIFGRETPVELNFNQVTKI 240 >tr|A4XBR1|A4XBR1_SALTO Tax_Id=369723 RecName: Full=Transcription antitermination protein nusG;[Salinispora tropica] Length = 242 Score = 237 bits (604), Expect = 8e-61 Identities = 123/204 (60%), Positives = 154/204 (75%), Gaps = 17/204 (8%) Query: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 L+ +LR PGDWYV+HSYAGYENKVK NLETR+ +LD+ D I+QVEVPT + E+KNG+R Sbjct: 53 LRQKLRYAPGDWYVVHSYAGYENKVKTNLETRITSLDMEDYIYQVEVPTRDEVEVKNGKR 112 Query: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGAT---SRPSALALDDVVKFLLPS 144 V KV PGYILVRM+LT +S++ VRNTPGVTGFVGAT RP+ L+LD+V+K+L P+ Sbjct: 113 SQVQAKVFPGYILVRMELTAESYSCVRNTPGVTGFVGATDRADRPAPLSLDEVLKWLAPA 172 Query: 145 GSAKKDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQK 204 A + + + +D+EVG+SVTV DG FA+LPATISE+NA+QQK Sbjct: 173 VEAVE--------------KKAKPEVKVLDFEVGDSVTVTDGAFASLPATISEINADQQK 218 Query: 205 LKVLVSIFGRETPVELTFSQVSKI 228 LKVLVSIFGRETPVEL F+QV+KI Sbjct: 219 LKVLVSIFGRETPVELNFNQVAKI 242 >tr|C5C0L0|C5C0L0_BEUC1 Tax_Id=471853 RecName: Full=Transcription antitermination protein nusG;[Beutenbergia cavernae] Length = 259 Score = 235 bits (600), Expect = 2e-60 Identities = 121/200 (60%), Positives = 149/200 (74%), Gaps = 8/200 (4%) Query: 29 KAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQRR 88 + EL+++PGDWYV+HSYAGYE +VKANLE+R Q+L++ + IFQVEVP E+V EIKN QR+ Sbjct: 68 RRELQAQPGDWYVVHSYAGYEKRVKANLESRTQSLNMEEYIFQVEVPEEDVVEIKNAQRK 127 Query: 89 LVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSAK 148 +V R +PGY+LVRMDLTD+SW AVR+TPGVTGFVG T +P L +VV L P+ AK Sbjct: 128 VVRRVRIPGYVLVRMDLTDESWGAVRHTPGVTGFVGHTHQPVPLTTSEVVSMLAPTLEAK 187 Query: 149 KDXXXXXXXXXXXXXXXLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVL 208 + IEV++ VGESVTV DGPF TLPATISE+ E QKLKVL Sbjct: 188 APATKPGAAP--------AAAPIEVEFTVGESVTVTDGPFDTLPATISEIAPESQKLKVL 239 Query: 209 VSIFGRETPVELTFSQVSKI 228 VSIFGRETPVEL+F+QV+KI Sbjct: 240 VSIFGRETPVELSFNQVAKI 259 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.315 0.134 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 1,418,931,730 Number of extensions: 50185441 Number of successful extensions: 83840 Number of sequences better than 10.0: 1888 Number of HSP's gapped: 82737 Number of HSP's successfully gapped: 2229 Length of query: 228 Length of database: 3,808,957,724 Length adjustment: 133 Effective length of query: 95 Effective length of database: 2,325,566,962 Effective search space: 220928861390 Effective search space used: 220928861390 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 78 (34.7 bits)