BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML1988c
         (237 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|Q9CBG8|Q9CBG8_MYCLE Tax_Id=1769 SubName: Full=Probable integr...   364   5e-99
tr|B8ZSJ3|B8ZSJ3_MYCLB Tax_Id=561304 SubName: Full=Probable inte...   364   5e-99
sp|Q10890|Y093_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized p...   256   2e-66
tr|Q7U2V4|Q7U2V4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSER...   256   2e-66
tr|C6DQV7|C6DQV7_MYCTK Tax_Id=478434 SubName: Full=Conserved mem...   256   2e-66
tr|C1AJB9|C1AJB9_MYCBT Tax_Id=561275 SubName: Full=Putative unch...   256   2e-66
tr|A5TYG6|A5TYG6_MYCTA Tax_Id=419947 SubName: Full=Putative cons...   256   2e-66
tr|A1KER4|A1KER4_MYCBP Tax_Id=410289 SubName: Full=Probable cons...   256   2e-66
tr|A5WIE8|A5WIE8_MYCTF Tax_Id=336982 SubName: Full=Conserved mem...   256   2e-66
tr|A4KNC1|A4KNC1_MYCTU Tax_Id=395095 SubName: Full=Conserved mem...   256   2e-66
tr|A2VN27|A2VN27_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   256   2e-66
tr|B2HKM6|B2HKM6_MYCMM Tax_Id=216594 SubName: Full=Conserved mem...   225   4e-57
tr|A0PWN3|A0PWN3_MYCUA Tax_Id=362242 SubName: Full=Conserved mem...   221   7e-56
tr|Q73YY9|Q73YY9_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   108   4e-22
tr|A4FBJ7|A4FBJ7_SACEN Tax_Id=405948 SubName: Full=Probable inte...    84   1e-14
tr|B1ME37|B1ME37_MYCA9 Tax_Id=561007 SubName: Full=Putative unch...    83   3e-14
tr|C6WL67|C6WL67_ACTMD Tax_Id=446462 SubName: Full=Putative inte...    77   2e-12
tr|C6WP38|C6WP38_ACTMD Tax_Id=446462 SubName: Full=Putative inte...    75   5e-12
tr|C4RBD6|C4RBD6_9ACTO Tax_Id=219305 SubName: Full=Putative unch...    74   1e-11
tr|C0U6T8|C0U6T8_9ACTO Tax_Id=526225 SubName: Full=Predicted int...    66   3e-09
tr|A4X832|A4X832_SALTO Tax_Id=369723 SubName: Full=Putative unch...    65   5e-09
tr|A0QFD5|A0QFD5_MYCA1 Tax_Id=243243 RecName: Full=RNA polymeras...    62   7e-08
tr|A8M5Q3|A8M5Q3_SALAI Tax_Id=391037 SubName: Full=Putative unch...    60   2e-07
tr|B1VFH7|B1VFH7_CORU7 Tax_Id=504474 SubName: Full=Putative memb...    57   1e-06
tr|C4LHI0|C4LHI0_CORK4 Tax_Id=645127 SubName: Full=Putative memb...    52   4e-05
tr|Q8FR05|Q8FR05_COREF Tax_Id=152794 SubName: Full=Putative unch...    51   1e-04
tr|C8NND9|C8NND9_COREF Tax_Id=196164 SubName: Full=Membrane prot...    51   1e-04
tr|Q8NRZ8|Q8NRZ8_CORGL Tax_Id=1718 SubName: Full=Hypothetical me...    49   5e-04
tr|A4QCN0|A4QCN0_CORGB Tax_Id=340322 SubName: Full=Putative unch...    49   5e-04
tr|Q6M6Q7|Q6M6Q7_CORGL Tax_Id=1718 SubName: Full=Putative membra...    49   5e-04
tr|Q4JU14|Q4JU14_CORJK Tax_Id=306537 SubName: Full=Putative memb...    48   8e-04
tr|C8RQL9|C8RQL9_CORJE Tax_Id=525262 SubName: Full=Membrane prot...    48   0.001
tr|C4DT69|C4DT69_9ACTO Tax_Id=446470 SubName: Full=Predicted int...    47   0.001
tr|C5BNI9|C5BNI9_TERTT Tax_Id=377629 SubName: Full=Putative unch...    47   0.002
tr|C2CM19|C2CM19_CORST Tax_Id=525268 SubName: Full=Putative unch...    47   0.002
tr|B5RYT2|B5RYT2_RALSO Tax_Id=305 SubName: Full=Cog5662, predict...    47   0.002
tr|A3RT07|A3RT07_RALSO Tax_Id=342110 SubName: Full=Putative unch...    47   0.002
tr|C5VBK4|C5VBK4_9CORY Tax_Id=553207 SubName: Full=Putative unch...    47   0.002
tr|C0XQ47|C0XQ47_9CORY Tax_Id=525263 SubName: Full=Putative unch...    47   0.002
tr|C0VT06|C0VT06_9CORY Tax_Id=548477 SubName: Full=Putative unch...    47   0.002
tr|C0E7V1|C0E7V1_9CORY Tax_Id=566549 SubName: Full=Putative unch...    47   0.002
tr|C2GIL5|C2GIL5_9CORY Tax_Id=548478 SubName: Full=Putative unch...    46   0.003
tr|Q6NIB0|Q6NIB0_CORDI Tax_Id=1717 SubName: Full=Putative membra...    45   0.005
tr|Q73WV4|Q73WV4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...    45   0.009
tr|A0QCH1|A0QCH1_MYCA1 Tax_Id=243243 SubName: Full=RNA polymeras...    45   0.009
tr|O05736|O05736_MYCAV Tax_Id=1764 SubName: Full=Putative unchar...    45   0.009
tr|Q2RFZ4|Q2RFZ4_MOOTA Tax_Id=264732 SubName: Full=Putative tran...    42   0.043
tr|C0WF52|C0WF52_9CORY Tax_Id=525260 SubName: Full=Putative unch...    42   0.043
tr|Q67R62|Q67R62_SYMTH Tax_Id=2734 SubName: Full=Putative unchar...    42   0.056
tr|C8WTP5|C8WTP5_ALIAD Tax_Id=521098 SubName: Full=Putative tran...    42   0.056

>tr|Q9CBG8|Q9CBG8_MYCLE Tax_Id=1769 SubName: Full=Probable integral
           membrane protein;[Mycobacterium leprae]
          Length = 237

 Score =  364 bits (934), Expect = 5e-99
 Identities = 189/237 (79%), Positives = 189/237 (79%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI
Sbjct: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
           TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL
Sbjct: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           LHESTAWSASLGVIMM                                    ITLRILMH
Sbjct: 121 LHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLTVYVVVDVVAGATITLRILMH 180

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSAV 237
           LPVAIGAVLAIAVWRHSSTPRPTF            PRNASRGRRRGHLWPTDGSAV
Sbjct: 181 LPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSAV 237


>tr|B8ZSJ3|B8ZSJ3_MYCLB Tax_Id=561304 SubName: Full=Probable
           integral membrane protein;[Mycobacterium leprae]
          Length = 237

 Score =  364 bits (934), Expect = 5e-99
 Identities = 189/237 (79%), Positives = 189/237 (79%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI
Sbjct: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
           TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL
Sbjct: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           LHESTAWSASLGVIMM                                    ITLRILMH
Sbjct: 121 LHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLTVYVVVDVVAGATITLRILMH 180

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSAV 237
           LPVAIGAVLAIAVWRHSSTPRPTF            PRNASRGRRRGHLWPTDGSAV
Sbjct: 181 LPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSAV 237


>sp|Q10890|Y093_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized
           protein Rv0093c/MT0102;[Mycobacterium tuberculosis]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|Q7U2V4|Q7U2V4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSERVED
           MEMBRANE PROTEIN;[Mycobacterium bovis]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|C6DQV7|C6DQV7_MYCTK Tax_Id=478434 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|C1AJB9|C1AJB9_MYCBT Tax_Id=561275 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium bovis]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|A5TYG6|A5TYG6_MYCTA Tax_Id=419947 SubName: Full=Putative
           conserved membrane protein;[Mycobacterium tuberculosis]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|A1KER4|A1KER4_MYCBP Tax_Id=410289 SubName: Full=Probable
           conserved membrane protein;[Mycobacterium bovis]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|A5WIE8|A5WIE8_MYCTF Tax_Id=336982 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|A4KNC1|A4KNC1_MYCTU Tax_Id=395095 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|A2VN27|A2VN27_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 282

 Score =  256 bits (653), Expect = 2e-66
 Identities = 137/236 (58%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGER  VPS RVDEHLGECSACRAWF QVA QA DLR+L +SRP +
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
            PV  LGI   PRR+   MTW+RWALLCVGIAQI L TVQG G+ VGLTH      G++L
Sbjct: 107 PPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHL 166

Query: 121 LHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMH 180
           L+EST+WS +LGVIM+                                     T RIL H
Sbjct: 167 LNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTH 226

Query: 181 LPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           LPV IGAVLAI VWR +S PRP              P NASRGRRRGHLWPTDGSA
Sbjct: 227 LPVVIGAVLAIMVWRSASGPRPR-PDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA 281


>tr|B2HKM6|B2HKM6_MYCMM Tax_Id=216594 SubName: Full=Conserved
           membrane protein;[Mycobacterium marinum]
          Length = 237

 Score =  225 bits (573), Expect = 4e-57
 Identities = 123/237 (51%), Positives = 142/237 (59%), Gaps = 2/237 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVAREALSARLDGERE VPS RVDEHL EC AC  WF+QVA QA  L++L++SRP I
Sbjct: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60

Query: 61  TPVDALGIVAPPR-RRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSY 119
             VD  GI   P+ R R  M+WQRWALL VGIAQ+ +  VQGLG SVGL H   +  G++
Sbjct: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120

Query: 120 LLHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILM 179
           LL+ESTAW+ +LGV M+                                     T R+L 
Sbjct: 121 LLNESTAWTIALGVAMVVAAIWPGAAGGLAGVLMVFVAVLSVYVVVDALSGAVTTSRVLT 180

Query: 180 HLPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           HLPV +G VLAI VWR    PRP              P+NASRGRR GHLWPTDGSA
Sbjct: 181 HLPVLLGTVLAIMVWRSRGAPRPA-PDVLADEPDIVLPQNASRGRRHGHLWPTDGSA 236


>tr|A0PWN3|A0PWN3_MYCUA Tax_Id=362242 SubName: Full=Conserved
           membrane protein;[Mycobacterium ulcerans]
          Length = 241

 Score =  221 bits (562), Expect = 7e-56
 Identities = 121/241 (50%), Positives = 142/241 (58%), Gaps = 6/241 (2%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDCEVARE LSARLDGERE VPS RVDEHL EC AC  WF+QVA QA  L++L++SRP I
Sbjct: 1   MDCEVARETLSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60

Query: 61  TPVDALGIVAPPR-RRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSY 119
             VD  GI   P+ R R  M+WQRWALLCVGIAQ+ +  VQGLG S+GL H   +  G++
Sbjct: 61  GAVDLAGIRPTPQPRERKRMSWQRWALLCVGIAQVAVGIVQGLGFSLGLGHHYVIGSGNH 120

Query: 120 LLHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIT----L 175
           LL+ESTAW+ +LGV M+                                     T     
Sbjct: 121 LLNESTAWTIALGVAMVVAAIWPGAAEGLAGVLMVFVAVLSVYVVVDALSGAVTTSRVLT 180

Query: 176 RILMHLPVAIGAVLAIAVWRHSSTPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGS 235
           R+L HLPV +G VLA+ VWR    PRP              P+NASRGRR GHLWPTDGS
Sbjct: 181 RVLTHLPVLLGTVLAVMVWRSRGAPRPA-PDVLADEPDIVLPQNASRGRRHGHLWPTDGS 239

Query: 236 A 236
           A
Sbjct: 240 A 240


>tr|Q73YY9|Q73YY9_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 459

 Score =  108 bits (271), Expect = 4e-22
 Identities = 77/245 (31%), Positives = 103/245 (42%), Gaps = 9/245 (3%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSR-PA 59
           M C+VAREALSARLDGER  V + +VD HL  C  CR+W    A Q R L  +     P 
Sbjct: 7   MRCDVAREALSARLDGERPQVLAQQVDAHLEACRGCRSWLIGAAVQTRRLASVTPGEGPD 66

Query: 60  ITPVDALGIVAPPRRRRPLMTW-----QRWALLCVGIAQIVLATVQGLGVSVGLT--HDR 112
           +       I   P  R   M W     +RW L+ VG+ Q+ +A  Q  G+  G+   H  
Sbjct: 67  LVDKIMASIGEQPTGRPAWMRWLRSHYRRWGLIGVGLFQVAIAAAQISGIDFGMVAGHMH 126

Query: 113 AMSFGSYLLHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 172
               G +L+HESTAW  +LG+ M+                                    
Sbjct: 127 GAMSGEHLMHESTAWLLALGLAMIAAGVWPASASGVAAITGVYSVALLGYVIVDAFDGEV 186

Query: 173 ITLRILMHLPVAIGAVLAIAVWRHS-STPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWP 231
              RI  H+P+ +G   A+ V R    + RP                +A  GRRRGHL P
Sbjct: 187 TATRIASHMPLLLGLAFALLVARERVGSRRPGSSDATADAGFAAWAADAPAGRRRGHLRP 246

Query: 232 TDGSA 236
            + +A
Sbjct: 247 INRAA 251


>tr|A4FBJ7|A4FBJ7_SACEN Tax_Id=405948 SubName: Full=Probable
           integral membrane protein;[Saccharopolyspora erythraea]
          Length = 237

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 8/132 (6%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           M+CE  R ++SARLDGE    P  +VD HL  C+ACRAW  + A   R LR +  + P  
Sbjct: 1   MNCESCRISISARLDGEDGTAPDEQVDAHLESCAACRAWQAKAAMLTRGLR-VRPASPTP 59

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL 120
             VDA+   AP RR R +    R AL  V +AQ++L  +Q LG+     H       ++L
Sbjct: 60  DLVDAVLAHAPRRRHRAV---PRVALAVVAVAQLLLGALQMLGLGPHAHH----GMSAHL 112

Query: 121 LHESTAWSASLG 132
            +ESTAW+ ++G
Sbjct: 113 FNESTAWNLAVG 124


>tr|B1ME37|B1ME37_MYCA9 Tax_Id=561007 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium abscessus]
          Length = 239

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 19/209 (9%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDL-RQLVDSRPA 59
           M+C+  RE LSA +DGE+ +V   R+DEH+  C++CR W      +AR L RQ   +R A
Sbjct: 1   MNCQEVREQLSAWVDGEQASVARKRLDEHVLSCASCREWL----GRARGLDRQFAYARSA 56

Query: 60  ITPVDALGIVAPPRRRRPLMTWQRW-----------ALLCVGIAQIVLATVQGLGVSVGL 108
            T  D  G +       PL    R+           AL+ +G+ Q+ +A +Q  G+  G+
Sbjct: 57  PTR-DLTGQILAAAAVEPLTPMARYAHWARHNINRCALVLIGLLQLGVAGMQVAGIDFGM 115

Query: 109 --THDRAMSFGSYLLHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 166
              H      G++L++ESTAW  +LGV M+                              
Sbjct: 116 VSAHHHGAMTGAHLMNESTAWVVALGVAMVIAGVRPAAAAGMATVLGAFALVLTGYVIND 175

Query: 167 XXXXXXITLRILMHLPVAIGAVLAIAVWR 195
                    RI+ HLPV +G + A+ V R
Sbjct: 176 AVNDQVTLARIISHLPVLLGLIFALLVLR 204


>tr|C6WL67|C6WL67_ACTMD Tax_Id=446462 SubName: Full=Putative
           integral membrane protein;[Actinosynnema mirum]
          Length = 238

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/134 (41%), Positives = 68/134 (50%), Gaps = 15/134 (11%)

Query: 3   CEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITP 62
           CE  REALSAR+DGE E V    VD HL  C+ C  W      +A+ L + +  RPA   
Sbjct: 5   CETCREALSARMDGEVEHVAPAEVDAHLAGCAECARW----QARAQALTRALRVRPAEAS 60

Query: 63  VDALGIV---APPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSY 119
            D +G V   APPRR   +  WQR  L  V + Q+ L   Q LG   G     A S   +
Sbjct: 61  PDLVGAVLADAPPRR---VAVWQRTGLAGVALVQLWLGLAQLLG---GGADGHAGS--GH 112

Query: 120 LLHESTAWSASLGV 133
           L  ES AW+ +LGV
Sbjct: 113 LFTESAAWNLALGV 126


>tr|C6WP38|C6WP38_ACTMD Tax_Id=446462 SubName: Full=Putative
           integral membrane protein;[Actinosynnema mirum]
          Length = 242

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 63/208 (30%), Positives = 84/208 (40%), Gaps = 12/208 (5%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           MDC+  REALSARLDGE   +P    D HL +C  C  W  +     R +R  V   PA+
Sbjct: 1   MDCDTCREALSARLDGEAAPLPPAWTDAHLAKCPDCARWRGRAQALTRLVR--VREAPAV 58

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGS-- 118
             + A  +   P     L    R AL  V +AQ+ LA  Q L  + G  HD     G+  
Sbjct: 59  PDLAAEVLADLPPAHGALR--PRLALAAVALAQLWLALAQLLTGATG--HDVTAGHGAEG 114

Query: 119 ---YLLHESTAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITL 175
              +L +E  AW+ +LGV ++                                       
Sbjct: 115 LAGHLFNEGAAWNLALGVGLLVAAVNGRRASGLLPTLGGFVVLLLGFSAHDLAEGTATAT 174

Query: 176 RILMHLPVAIGAVLAIAVWR-HSSTPRP 202
           R+  HLP+A G VL + V R H   P P
Sbjct: 175 RVASHLPLAAGLVLLLLVARAHRDHPEP 202


>tr|C4RBD6|C4RBD6_9ACTO Tax_Id=219305 SubName: Full=Putative
           uncharacterized protein;[Micromonospora sp. ATCC 39149]
          Length = 276

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 54/148 (36%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLR-QLVDSRPA 59
           M CE  RE LSA+LDGE      V  + HL  C  CRAWF+  A   R  R ++V + P 
Sbjct: 8   MRCEQWREMLSAQLDGEETPAERVTAEGHLVTCGDCRAWFETAAAVTRRARTRVVSAVPD 67

Query: 60  ITPVDALGIVA--PPRRRRPLMTWQ---RW----------ALLCVGIAQIVLATVQGLGV 104
           +       + A  PP R R    W+   RW           L  VG  Q+VL  VQ   V
Sbjct: 68  LADAVLAAVPAGSPPGRWRSTSRWRSPGRWRERLVAGLRATLGLVGAVQVVLGLVQ---V 124

Query: 105 SVGLTHDRAMSFGSYLLHESTAWSASLG 132
             G T   A + G +L HES AW+ ++G
Sbjct: 125 GRGTTVAHAHATGQHLWHESAAWNVAVG 152


>tr|C0U6T8|C0U6T8_9ACTO Tax_Id=526225 SubName: Full=Predicted
           integral membrane protein, COG5660;[Geodermatophilus
           obscurus DSM 43160]
          Length = 215

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 51/140 (36%), Positives = 63/140 (45%), Gaps = 23/140 (16%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           M C   REA+SARLDGE   +P+  +D HL  C AC AW  Q     R  R  +   PA+
Sbjct: 1   MQCTPYREAVSARLDGESPGLPAGELDAHLDACPACAAWARQAELVTR--RARLAPAPAV 58

Query: 61  TPVDALGIVAPPR---------RRRPLMTWQRWALLCVGIAQIVLA---TVQGLGVSVGL 108
             + A  + A PR         R R      R ALL  G+AQ  LA    V G G     
Sbjct: 59  PDLTATVLAALPRELPGTAAAARARLATAALRLALLAAGVAQAALAWPSLVAGTG----- 113

Query: 109 THDRAMSFGSYLLHESTAWS 128
               AMS   ++ HES  W+
Sbjct: 114 ----AMSAPVHMAHESGVWN 129


>tr|A4X832|A4X832_SALTO Tax_Id=369723 SubName: Full=Putative
           uncharacterized protein;[Salinispora tropica]
          Length = 256

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 48/145 (33%), Positives = 62/145 (42%), Gaps = 16/145 (11%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLR--------- 51
           M CE  RE LSA+LDGE         D HL  C ACR WFDQ A   R  R         
Sbjct: 1   MGCEQWREVLSAQLDGEETPAERAAADSHLASCGACRTWFDQAAAITRRARLSVSVIGPD 60

Query: 52  ---QLVDSRPAITPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQ-GLGVSVG 107
               ++ + PA  P  A   +  P R+R L    R  L   G  Q++L   Q G   +  
Sbjct: 61  LTDAILAAHPATAPTGA--TMRRPWRQR-LALALRAVLGLTGALQVMLGLTQVGQAAAGP 117

Query: 108 LTHDRAMSFGSYLLHESTAWSASLG 132
             H        +L HE+ AW+ ++G
Sbjct: 118 HIHAGGPLASGHLWHEAAAWNIAVG 142


>tr|A0QFD5|A0QFD5_MYCA1 Tax_Id=243243 RecName: Full=RNA polymerase
           sigma factor;[Mycobacterium avium]
          Length = 401

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 46/173 (26%), Positives = 66/173 (38%), Gaps = 8/173 (4%)

Query: 72  PRRRRPLMTW-----QRWALLCVGIAQIVLATVQGLGVSVGLT--HDRAMSFGSYLLHES 124
           P  R   M W     +RW L+ VG+ Q+ +A  Q  G+  G+   H      G +L+HES
Sbjct: 21  PTGRPAWMRWLRSHYRRWGLIGVGLFQVAIAAAQISGIDFGMVAGHMHGAMSGEHLMHES 80

Query: 125 TAWSASLGVIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLRILMHLPVA 184
           TAW  +LG+ M+                                       RI  H+P+ 
Sbjct: 81  TAWLLALGLAMIAAGVWPASASGVAAITGVYSVALLGYVIVDAFDGEVTATRIASHMPLL 140

Query: 185 IGAVLAIAVWRHS-STPRPTFXXXXXXXXXXXXPRNASRGRRRGHLWPTDGSA 236
           +G   A+ V R    + RP                +A  GRRRGHL P + +A
Sbjct: 141 LGLAFALLVARERVGSRRPGSSDATADAGFAAWAADAPAGRRRGHLRPINRAA 193


>tr|A8M5Q3|A8M5Q3_SALAI Tax_Id=391037 SubName: Full=Putative
           uncharacterized protein;[Salinispora arenicola]
          Length = 256

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 16/145 (11%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLR--------- 51
           M CE  RE LSA+LDGE         + HL  C  CRAWFD+ A   R  R         
Sbjct: 1   MGCEQWREVLSAQLDGEDTPGEQAAAESHLTGCGECRAWFDRAAAATRRARLSVSVTGPD 60

Query: 52  ---QLVDSRPAITPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQ-GLGVSVG 107
               ++ + P+  PV++    A    R+ L    R AL   G  Q++L   Q G   +  
Sbjct: 61  LTESVLAALPSPAPVES---AARRSGRQRLALALRAALGLTGTLQVLLGLTQIGRAAAGP 117

Query: 108 LTHDRAMSFGSYLLHESTAWSASLG 132
             H        +L HE+ AW+ ++G
Sbjct: 118 HIHAGGPLASGHLWHEAAAWNIAVG 142


>tr|B1VFH7|B1VFH7_CORU7 Tax_Id=504474 SubName: Full=Putative
          membrane protein;[Corynebacterium urealyticum]
          Length = 271

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/51 (50%), Positives = 32/51 (62%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLR 51
          M+C   R ALSARLDGE  A+P   VD H+ +C  C+AW+ Q     RDLR
Sbjct: 1  MECAEVRAALSARLDGEEVALPGDIVDAHVAQCEECQAWYAQATAIGRDLR 51


>tr|C4LHI0|C4LHI0_CORK4 Tax_Id=645127 SubName: Full=Putative
           membrane protein;[Corynebacterium kroppenstedtii]
          Length = 270

 Score = 52.4 bits (124), Expect = 4e-05
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 15/133 (11%)

Query: 1   MDCEVAREALSARLDGEREAVP--SVRVDEHLGECSACRAWFDQVADQARDLRQL-VDSR 57
           M+C   R+ALSAR+DGER         +D HL EC  C+ W+ Q     R LR    D  
Sbjct: 1   MECSEVRQALSARIDGERSRATWDDDVIDAHLAECEDCQNWYTQALTLGRTLRVAPADDS 60

Query: 58  PAITPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFG 117
            +I       + + P  + P    + W ++ + +++I L       + +GL +   + + 
Sbjct: 61  ESIPDFSEFLVQSVPEDQLPHR--RSWRVISLSLSRIAL-------IVLGLIY---VGWA 108

Query: 118 SYLLHESTAWSAS 130
            YLL  ST  + S
Sbjct: 109 IYLLSHSTTLTGS 121


>tr|Q8FR05|Q8FR05_COREF Tax_Id=152794 SubName: Full=Putative
          uncharacterized protein;[Corynebacterium efficiens]
          Length = 229

 Score = 50.8 bits (120), Expect = 1e-04
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
          +DC   + ALSARLDGE   +    +D HL  C ACR ++D+ A   R L         +
Sbjct: 8  VDCHGIQAALSARLDGEPTGIDDAVIDTHLAHCEACRTFYDRAAALNRTLSLSAVEPRTM 67

Query: 61 TPVD----ALGIVAPPRRRR 76
           P D     L  V P  RRR
Sbjct: 68 VPPDLSEIILAEVEPQWRRR 87


>tr|C8NND9|C8NND9_COREF Tax_Id=196164 SubName: Full=Membrane
          protein;[Corynebacterium efficiens YS-314]
          Length = 228

 Score = 50.8 bits (120), Expect = 1e-04
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
          +DC   + ALSARLDGE   +    +D HL  C ACR ++D+ A   R L         +
Sbjct: 7  VDCHGIQAALSARLDGEPTGIDDAVIDTHLAHCEACRTFYDRAAALNRTLSLSAVEPRTM 66

Query: 61 TPVD----ALGIVAPPRRRR 76
           P D     L  V P  RRR
Sbjct: 67 VPPDLSEIILAEVEPQWRRR 86


>tr|Q8NRZ8|Q8NRZ8_CORGL Tax_Id=1718 SubName: Full=Hypothetical
           membrane protein;[Corynebacterium glutamicum]
          Length = 238

 Score = 48.9 bits (115), Expect = 5e-04
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           +DC   + ALSA+LDGE   +    ++ HL  C  CR ++++ A+  R L         +
Sbjct: 17  VDCSAIQAALSAKLDGEPTGLDDAVIEAHLANCEECRNYYNRAAELNRMLNFCAAEPRTL 76

Query: 61  TPVDALGIV---APPRRRRPL------MTWQRWALLCVGIAQIVLA-TVQGLGVSVGLTH 110
           TP D   I+     P  RR            R  L+ +G+  +    T+ G   S+ +  
Sbjct: 77  TPPDLSEIILAEVEPEWRRHANAKVVGSLLSRVLLVILGVVYLAWGITMLGDSASISVQE 136

Query: 111 DRAMSFGSYLLHESTAWSASLGV 133
           D      S LL E+ A+  +L V
Sbjct: 137 D---PLTSRLLAEAVAYRIALSV 156


>tr|A4QCN0|A4QCN0_CORGB Tax_Id=340322 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium glutamicum]
          Length = 223

 Score = 48.9 bits (115), Expect = 5e-04
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           +DC   + ALSA+LDGE   +    ++ HL  C  CR ++++ A+  R L         +
Sbjct: 2   VDCSAIQAALSAKLDGEPTGLDDAVIEAHLANCEECRNYYNRAAELNRMLNFCAAEPRTL 61

Query: 61  TPVDALGIV---APPRRRRPL------MTWQRWALLCVGIAQIVLA-TVQGLGVSVGLTH 110
           TP D   I+     P  RR            R  L+ +G+  +    T+ G   S+ +  
Sbjct: 62  TPPDLSEIILAEVEPEWRRHANAKVVGSLLSRVLLVILGVVYLAWGITMLGDSASISVQE 121

Query: 111 DRAMSFGSYLLHESTAWSASLGV 133
           D      S LL E+ A+  +L V
Sbjct: 122 D---PLTSRLLAEAVAYRIALSV 141


>tr|Q6M6Q7|Q6M6Q7_CORGL Tax_Id=1718 SubName: Full=Putative membrane
           protein;[Corynebacterium glutamicum]
          Length = 223

 Score = 48.9 bits (115), Expect = 5e-04
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           +DC   + ALSA+LDGE   +    ++ HL  C  CR ++++ A+  R L         +
Sbjct: 2   VDCSAIQAALSAKLDGEPTGLDDAVIEAHLANCEECRNYYNRAAELNRMLNFCAAEPRTL 61

Query: 61  TPVDALGIV---APPRRRRPL------MTWQRWALLCVGIAQIVLA-TVQGLGVSVGLTH 110
           TP D   I+     P  RR            R  L+ +G+  +    T+ G   S+ +  
Sbjct: 62  TPPDLSEIILAEVEPEWRRHANAKVVGSLLSRVLLVILGVVYLAWGITMLGDSASISVQE 121

Query: 111 DRAMSFGSYLLHESTAWSASLGV 133
           D      S LL E+ A+  +L V
Sbjct: 122 D---PLTSRLLAEAVAYRIALSV 141


>tr|Q4JU14|Q4JU14_CORJK Tax_Id=306537 SubName: Full=Putative
          membrane protein;[Corynebacterium jeikeium]
          Length = 260

 Score = 48.1 bits (113), Expect = 8e-04
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLV---DSR 57
          MDC+  R A+SARLDGE   +    VD HL  C  C+ W+  V    R +       +S 
Sbjct: 1  MDCQAVRNAMSARLDGETAELSDDLVDAHLAGCEECQRWYATVTALGRRINLSAAPEEST 60

Query: 58 PAITPVD 64
          P   P D
Sbjct: 61 PTTEPND 67


>tr|C8RQL9|C8RQL9_CORJE Tax_Id=525262 SubName: Full=Membrane
          protein;[Corynebacterium jeikeium ATCC 43734]
          Length = 260

 Score = 47.8 bits (112), Expect = 0.001
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLR---QLVDSR 57
          MDC+  R ++SARLDGE   +    VD HL  C  C+ W+  V    R +       +  
Sbjct: 1  MDCQAVRTSMSARLDGETAELSDDLVDAHLAACEDCQRWYSTVTALGRRMNVSATPTEGE 60

Query: 58 PAITPVD 64
          PA  P D
Sbjct: 61 PATEPGD 67


>tr|C4DT69|C4DT69_9ACTO Tax_Id=446470 SubName: Full=Predicted
           integral membrane protein, COG5660;[Stackebrandtia
           nassauensis DSM 44728]
          Length = 208

 Score = 47.4 bits (111), Expect = 0.001
 Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 1   MDCEVAREALSARLDGE--REAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRP 58
           MDC  AR ALSA+LDGE   EA P   +  HL  C  CR W      +A  L +   +  
Sbjct: 1   MDCTNARAALSAQLDGEPIAEAEP---LRLHLAGCVECRGW----KQRAEALTRTASTAF 53

Query: 59  AITPVDALGIV--------APPRRRRPLMTWQRWALLCVGIAQIVLA 97
           A TP   +G++        A   R R      RWA+    +AQ+VLA
Sbjct: 54  ASTPDLTVGVLEAVSAADNAANARARARARVLRWAVGIAAVAQLVLA 100


>tr|C5BNI9|C5BNI9_TERTT Tax_Id=377629 SubName: Full=Putative
           uncharacterized protein;[Teredinibacter turnerae]
          Length = 145

 Score = 47.0 bits (110), Expect = 0.002
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 15/135 (11%)

Query: 2   DCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAIT 61
           DCEV    +S  +DGE       R+++HL +CSACR  ++Q+      L++L      I+
Sbjct: 4   DCEVLSPLISGLVDGELTQQQGQRINQHLAKCSACRERYEQL----NTLKKLTGDYSLIS 59

Query: 62  PVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYLL 121
             +    +    +   L+ W  W LL      +++A + G  V   +     + +     
Sbjct: 60  QDERQREILRTDQMANLLAWGGWLLL------LIVAMLMGYAVIFTVIQSDMLWW----- 108

Query: 122 HESTAWSASLGVIMM 136
           H     S +LG++++
Sbjct: 109 HRCLVGSLTLGILLL 123


>tr|C2CM19|C2CM19_CORST Tax_Id=525268 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium striatum ATCC
           6940]
          Length = 231

 Score = 47.0 bits (110), Expect = 0.002
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 16/116 (13%)

Query: 4   EVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPV 63
           E  + A+SA+LDGE   +P+  VD H+  C+ CRA+ D+ A  +R L   V+S   + P 
Sbjct: 5   EQVQAAISAQLDGEPAQLPADVVDAHVESCAQCRAFRDKAAALSRSL-SFVESAEGMAPP 63

Query: 64  DAL------GIVAPPRR----RRPLMTWQRWALLCVGI-----AQIVLATVQGLGV 104
             L      G+ +   R    R+  +T  R  L+ +G+     A +V+A+  GL V
Sbjct: 64  QDLSEVIIAGVESEWNRASSARQTALTVARVGLVSLGLVFAVWAIVVVASASGLAV 119


>tr|B5RYT2|B5RYT2_RALSO Tax_Id=305 SubName: Full=Cog5662, predicted
           transmembrane transcriptional regulator (Anti-sigma
           factor) protein;[Ralstonia solanacearum]
          Length = 276

 Score = 47.0 bits (110), Expect = 0.002
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 24/125 (19%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           M C+  R  L+AR DGE  A  S+R++ HL  C+AC A   +    AR LRQ + + PA+
Sbjct: 2   MICDDVRALLTARADGELGAADSLRIESHLATCAACAAMAARHDRVARALRQGLRA-PAL 60

Query: 61  ---------------TPVDALGIVAPPRRRR--PLMTWQRWALLCVGIAQIVLATVQGLG 103
                             +A+    P  RRR  P   W+R      G+A ++   V G  
Sbjct: 61  YAAAPQGLAGRILQAVQAEAMQSAVPAARRRVPPRSGWRR------GLAWLMTPAVPGRM 114

Query: 104 VSVGL 108
             +GL
Sbjct: 115 FGLGL 119


>tr|A3RT07|A3RT07_RALSO Tax_Id=342110 SubName: Full=Putative
           uncharacterized protein;[Ralstonia solanacearum UW551]
          Length = 276

 Score = 47.0 bits (110), Expect = 0.002
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 24/125 (19%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           M C+  R  L+AR DGE  A  S+R++ HL  C+AC A   +    AR LRQ + + PA+
Sbjct: 2   MICDDVRALLTARADGELGAADSLRIESHLATCAACAAMAARHDRVARALRQGLRA-PAL 60

Query: 61  ---------------TPVDALGIVAPPRRRR--PLMTWQRWALLCVGIAQIVLATVQGLG 103
                             +A+    P  RRR  P   W+R      G+A ++   V G  
Sbjct: 61  YAAAPQGLAGRILQAVQAEAMQSAVPAARRRVPPRSGWRR------GLAWLMTPAVPGRM 114

Query: 104 VSVGL 108
             +GL
Sbjct: 115 FGLGL 119


>tr|C5VBK4|C5VBK4_9CORY Tax_Id=553207 SubName: Full=Putative
          uncharacterized protein;[Corynebacterium matruchotii
          ATCC 14266]
          Length = 219

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLR---QLVDSR 57
          ++C+  + ALSARLDGE   +P   VD H+ EC+ C+++ D  A   R L      V   
Sbjct: 6  VECQQVQAALSARLDGEPSPLPDDVVDAHVAECAECQSFLDNAALLNRTLAFSDTSVSDI 65

Query: 58 PAITPVDALGIVAPPRRRR 76
          P ++  + +  VAP  RRR
Sbjct: 66 PDLSE-EIMAGVAPVWRRR 83


>tr|C0XQ47|C0XQ47_9CORY Tax_Id=525263 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 208

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 11/103 (10%)

Query: 7   REALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPVDAL 66
           R ALSAR+DGE   +    VD H+ EC+ C A++ ++   +R+LR   +    + P + L
Sbjct: 8   RAALSARVDGESSGLDDAVVDAHVAECAECSAYYQRILSLSRNLR-FAEIGGGMAPPENL 66

Query: 67  GIV----------APPRRRRPLMTWQRWALLCVGIAQIVLATV 99
             V             +RR  L+T  R AL+   +  +  A V
Sbjct: 67  STVILAGVEGEWRRLSQRRTVLLTLCRIALVAAALVWLAWAVV 109


>tr|C0VT06|C0VT06_9CORY Tax_Id=548477 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 223

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           + C+  + A+SA+LD E+  V    ++ HL  C+ CRA+ +       +L    D  P +
Sbjct: 2   ISCQEIQRAISAKLDNEKADVDDTIIEAHLEGCADCRAYLENARLLKAELSVTDDDAPDL 61

Query: 61  TPVDALGIVAPPR----RRRPLMTWQRWALLCVGIAQIVLA 97
           T +   G+    R    RR   +   R  L+ +GIA I+ A
Sbjct: 62  TDLILAGVGPEVRRAESRRATSLAIARTLLVLLGIAYIIWA 102


>tr|C0E7V1|C0E7V1_9CORY Tax_Id=566549 SubName: Full=Putative
          uncharacterized protein;[Corynebacterium matruchotii
          ATCC 33806]
          Length = 219

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLR---QLVDSR 57
          ++C+  + ALSARLDGE   +P   VD H+ EC+ C+++ D  A   R L      V   
Sbjct: 6  VECQQVQAALSARLDGEPSPLPDDVVDAHVAECAECQSFLDNAALLNRTLAFSDTSVSDI 65

Query: 58 PAITPVDALGIVAPPRRRR 76
          P ++  + +  VAP  RRR
Sbjct: 66 PDLSE-EIMAGVAPVWRRR 83


>tr|C2GIL5|C2GIL5_9CORY Tax_Id=548478 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 223

 Score = 46.2 bits (108), Expect = 0.003
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           + C+  + A+SA+LD E+  +    ++ HL  C+ CRA+ +       +L    D  P +
Sbjct: 2   ISCQEIQRAISAKLDNEKADIDDTIIEAHLEGCADCRAYLENARLLKAELSVTDDDAPDL 61

Query: 61  TPVDALGIVAPPR----RRRPLMTWQRWALLCVGIAQIVLA 97
           T +   G+    R    RR   +   R  L+ +GIA I+ A
Sbjct: 62  TDLILAGVGPEVRRAESRRATSLAIARTLLVLLGIAYIIWA 102


>tr|Q6NIB0|Q6NIB0_CORDI Tax_Id=1717 SubName: Full=Putative
          membrane protein;[Corynebacterium diphtheriae]
          Length = 220

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 21/50 (42%), Positives = 27/50 (54%)

Query: 1  MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDL 50
          + C   + ALSARLDGE   +    +D HL  C  C+A+FDQ     R L
Sbjct: 2  LTCSTIQAALSARLDGETPGIDDDVIDTHLDSCPDCQAYFDQAVALNRSL 51


>tr|Q73WV4|Q73WV4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 133

 Score = 44.7 bits (104), Expect = 0.009
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 8   EALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPVDALG 67
           EA++A +DGE      +R   HL +C+ C A   +V DQ+R    L DSRP   P + LG
Sbjct: 49  EAIAAFVDGELRMNAHLRAAHHLSQCAQCAA---EVDDQSRARAALRDSRPIRIPANLLG 105

Query: 68  IVA 70
           ++A
Sbjct: 106 MLA 108


>tr|A0QCH1|A0QCH1_MYCA1 Tax_Id=243243 SubName: Full=RNA polymerase
           sigma-70 factor;[Mycobacterium avium]
          Length = 424

 Score = 44.7 bits (104), Expect = 0.009
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 8   EALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPVDALG 67
           EA++A +DGE      +R   HL +C+ C A   +V DQ+R    L DSRP   P + LG
Sbjct: 340 EAIAAFVDGELRMNAHLRAAHHLSQCAQCAA---EVDDQSRARAALRDSRPIRIPANLLG 396

Query: 68  IVA 70
           ++A
Sbjct: 397 MLA 399


>tr|O05736|O05736_MYCAV Tax_Id=1764 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium avium]
          Length = 133

 Score = 44.7 bits (104), Expect = 0.009
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 8   EALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPVDALG 67
           EA++A +DGE      +R   HL +C+ C A   +V DQ+R    L DSRP   P + LG
Sbjct: 49  EAIAAFVDGELRMNAHLRAAHHLSQCAQCAA---EVDDQSRARAALRDSRPIRIPANLLG 105

Query: 68  IVA 70
           ++A
Sbjct: 106 MLA 108


>tr|Q2RFZ4|Q2RFZ4_MOOTA Tax_Id=264732 SubName: Full=Putative
           transmembrane transcriptional regulator (Anti-sigma
           factor);[Moorella thermoacetica]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.043
 Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 1/103 (0%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60
           M+C  A+E  S  LDGE        V  HL  C ACR    +  + +R LR+L  +  A 
Sbjct: 1   MECREAKEFFSPYLDGELTTEERDIVRRHLAACPACREEMARWEELSRALREL-KAPVAA 59

Query: 61  TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLG 103
            P  A  ++A     R   +W R   L    A  VL     +G
Sbjct: 60  PPGFAAAVMARVNPGRQARSWWRVRRLVAAAAAAVLLVAGSVG 102


>tr|C0WF52|C0WF52_9CORY Tax_Id=525260 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium accolens ATCC
           49725]
          Length = 233

 Score = 42.4 bits (98), Expect = 0.043
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)

Query: 9   ALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITP------ 62
           A+SA+LDGE   + +  +D HL  C+ CRA+ D+ A  +R L  +  +   + P      
Sbjct: 10  AISAQLDGEEAELSADVIDAHLEHCAECRAFRDKAAALSRSLSFVEPADSGMAPPTDLSE 69

Query: 63  VDALGIVAPPRR----RRPLMTWQRWALLCVGIAQIVLATVQ 100
           V   G+    +R    R+  +T  R AL+ +G+   V A VQ
Sbjct: 70  VILAGVEPEWKRASSARQANLTVARIALVVMGLVFAVWAIVQ 111


>tr|Q67R62|Q67R62_SYMTH Tax_Id=2734 SubName: Full=Putative
           uncharacterized protein;[Symbiobacterium thermophilum]
          Length = 400

 Score = 42.0 bits (97), Expect = 0.056
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 22/113 (19%)

Query: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVAD--------------- 45
           M+C+  R  LS  +D E  A   +RV++HL  C AC A  D +                 
Sbjct: 1   MNCDGVRPLLSGYIDQELSAGELLRVEQHLRRCHACAAEVDALRQTVALVASLDEVEVPA 60

Query: 46  --QARDLRQLVDSRPAITPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVL 96
              A+  ++L+   P I  V   G     R R  L ++QRWA+     A  V+
Sbjct: 61  TFHAQLRQRLMSEDPPIARVHTAG-----RGRNRLHSFQRWAIPAAAAAAFVI 108


>tr|C8WTP5|C8WTP5_ALIAD Tax_Id=521098 SubName: Full=Putative
           transmembrane anti-sigma factor; Flags:
           Precursor;[Alicyclobacillus acidocaldarius subsp.
           acidocaldarius]
          Length = 169

 Score = 42.0 bits (97), Expect = 0.056
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 3   CEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVD--SRPAI 60
           CE     LSA LDGE       RV+ HL  C+ C+   D +    R L       S PA 
Sbjct: 4   CEFVEPMLSAYLDGELAKDDKARVEAHLAVCARCQGLVDAMRADDRALLSWAQTLSAPAD 63

Query: 61  TP---VDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATV 99
            P   ++ALG+     + R L  +  +A L VG+A +VLA V
Sbjct: 64  MPMRVLNALGLSRQEVQSRRL-AYVYFASLAVGVA-LVLAAV 103


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.325    0.135    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 1,398,564,804
Number of extensions: 46103000
Number of successful extensions: 159750
Number of sequences better than 10.0: 166
Number of HSP's gapped: 160308
Number of HSP's successfully gapped: 166
Length of query: 237
Length of database: 3,808,957,724
Length adjustment: 133
Effective length of query: 104
Effective length of database: 2,325,566,962
Effective search space: 241858964048
Effective search space used: 241858964048
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)