BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ML2123
         (233 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,153,314 sequences; 3,808,957,724 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|Q50136|PRRA_MYCLE Tax_Id=1769 (prrA)RecName: Full=Transcripti...   365   2e-99
tr|B8ZSQ6|B8ZSQ6_MYCLB Tax_Id=561304 SubName: Full=Two-component...   365   2e-99
tr|B2HF74|B2HF74_MYCMM Tax_Id=216594 (prrA)SubName: Full=Two-com...   358   3e-97
tr|Q742K1|Q742K1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   357   6e-97
tr|A0QBJ2|A0QBJ2_MYCA1 Tax_Id=243243 SubName: Full=Two component...   357   6e-97
tr|A0PKW8|A0PKW8_MYCUA Tax_Id=362242 (prrA)SubName: Full=Two com...   354   5e-96
sp|P0A5Z6|PRRA_MYCTU Tax_Id=1773 (prrA)RecName: Full=Transcripti...   353   1e-95
sp|P0A5Z7|PRRA_MYCBO Tax_Id=1765 (prrA)RecName: Full=Transcripti...   353   1e-95
tr|C6DWJ0|C6DWJ0_MYCTK Tax_Id=478434 SubName: Full=Two component...   353   1e-95
tr|C1ALN7|C1ALN7_MYCBT Tax_Id=561275 (prrA)SubName: Full=Two com...   353   1e-95
tr|A5U0U2|A5U0U2_MYCTA Tax_Id=419947 (prrA)SubName: Full=Two com...   353   1e-95
tr|A1KH35|A1KH35_MYCBP Tax_Id=410289 (prrA)SubName: Full=Two com...   353   1e-95
tr|A5WKS5|A5WKS5_MYCTF Tax_Id=336982 SubName: Full=Two component...   353   1e-95
tr|A4KFK7|A4KFK7_MYCTU Tax_Id=395095 SubName: Full=Two component...   353   1e-95
tr|A2VGJ7|A2VGJ7_MYCTU Tax_Id=348776 SubName: Full=Two component...   353   1e-95
tr|A4T774|A4T774_MYCGI Tax_Id=350054 SubName: Full=Two component...   345   2e-93
tr|A1TF31|A1TF31_MYCVP Tax_Id=350058 SubName: Full=Two component...   345   2e-93
tr|Q1B3I2|Q1B3I2_MYCSS Tax_Id=164756 SubName: Full=Two component...   345   3e-93
tr|A1ULL8|A1ULL8_MYCSK Tax_Id=189918 SubName: Full=Two component...   345   3e-93
tr|A0R407|A0R407_MYCS2 Tax_Id=246196 (prrA)SubName: Full=DNA-bin...   345   3e-93
tr|A3Q618|A3Q618_MYCSJ Tax_Id=164757 SubName: Full=Two component...   343   9e-93
tr|B1MJ92|B1MJ92_MYCA9 Tax_Id=561007 SubName: Full=Probable tran...   333   7e-90
tr|C0ZMN4|C0ZMN4_RHOE4 Tax_Id=234621 (prrA)SubName: Full=Two-com...   264   5e-69
tr|C3JDU5|C3JDU5_RHOER Tax_Id=596309 (prrA)SubName: Full=DNA-bin...   264   5e-69
tr|C0ZNA6|C0ZNA6_RHOE4 Tax_Id=234621 SubName: Full=Probable OmpR...   259   2e-67
tr|C3JP12|C3JP12_RHOER Tax_Id=596309 (prrA)SubName: Full=DNA-bin...   259   2e-67
tr|Q5Z232|Q5Z232_NOCFA Tax_Id=37329 SubName: Full=Putative two-c...   257   6e-67
tr|C1ATP4|C1ATP4_RHOOB Tax_Id=632772 SubName: Full=OmpR family t...   251   4e-65
tr|Q0S6Q4|Q0S6Q4_RHOSR Tax_Id=101510 SubName: Full=Response regu...   249   1e-64
tr|A0QP21|A0QP21_MYCS2 Tax_Id=246196 SubName: Full=Two component...   234   7e-60
tr|Q1BFP8|Q1BFP8_MYCSS Tax_Id=164756 SubName: Full=Two component...   233   1e-59
tr|A3PSU1|A3PSU1_MYCSJ Tax_Id=164757 SubName: Full=Two component...   233   1e-59
tr|A1U984|A1U984_MYCSK Tax_Id=189918 SubName: Full=Two component...   233   1e-59
tr|B1MNV8|B1MNV8_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...   228   3e-58
tr|A4T3R2|A4T3R2_MYCGI Tax_Id=350054 SubName: Full=Two component...   226   2e-57
tr|A1T1J1|A1T1J1_MYCVP Tax_Id=350058 SubName: Full=Two component...   226   2e-57
tr|Q82Q73|Q82Q73_STRAW Tax_Id=33903 SubName: Full=Putative two-c...   187   6e-46
tr|Q5YPS5|Q5YPS5_NOCFA Tax_Id=37329 SubName: Full=Putative two-c...   184   7e-45
tr|C2AMB6|C2AMB6_TSUPA Tax_Id=521096 SubName: Full=Response regu...   184   7e-45
tr|Q2JDV8|Q2JDV8_FRASC Tax_Id=106370 SubName: Full=Two component...   181   4e-44
tr|Q0RPN0|Q0RPN0_FRAAA Tax_Id=326424 SubName: Full=Putative Tran...   181   7e-44
tr|C1A3C1|C1A3C1_RHOE4 Tax_Id=234621 (mprA)SubName: Full=Two-com...   180   1e-43
tr|C3JXB5|C3JXB5_RHOER Tax_Id=596309 SubName: Full=Response regu...   180   1e-43
sp|A0R3I8|MPRA_MYCS2 Tax_Id=246196 (mprA)RecName: Full=Response ...   179   3e-43
tr|B5GEX2|B5GEX2_9ACTO Tax_Id=465543 SubName: Full=Two-component...   178   4e-43
tr|C7Q9Q8|C7Q9Q8_CATAD Tax_Id=479433 SubName: Full=Two component...   177   6e-43
tr|C6WMN8|C6WMN8_ACTMD Tax_Id=446462 SubName: Full=Two component...   177   6e-43
tr|A7NM12|A7NM12_ROSCS Tax_Id=383372 SubName: Full=Two component...   176   1e-42
tr|Q82G51|Q82G51_STRAW Tax_Id=33903 (mprA)SubName: Full=Putative...   176   2e-42
tr|C6WJE3|C6WJE3_ACTMD Tax_Id=446462 SubName: Full=Two component...   176   2e-42

>sp|Q50136|PRRA_MYCLE Tax_Id=1769 (prrA)RecName:
           Full=Transcriptional regulatory protein
           prrA;[Mycobacterium leprae]
          Length = 233

 Score =  365 bits (938), Expect = 2e-99
 Identities = 196/233 (84%), Positives = 196/233 (84%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN
Sbjct: 1   MDTGVSSPRVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS
Sbjct: 121 ALLRRRGATATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233


>tr|B8ZSQ6|B8ZSQ6_MYCLB Tax_Id=561304 SubName: Full=Two-component
           response regulator;[Mycobacterium leprae]
          Length = 233

 Score =  365 bits (938), Expect = 2e-99
 Identities = 196/233 (84%), Positives = 196/233 (84%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN
Sbjct: 1   MDTGVSSPRVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS
Sbjct: 121 ALLRRRGATATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233


>tr|B2HF74|B2HF74_MYCMM Tax_Id=216594 (prrA)SubName:
           Full=Two-component response transcriptional regulatory
           protein PrrA;[Mycobacterium marinum]
          Length = 236

 Score =  358 bits (919), Expect = 3e-97
 Identities = 191/233 (81%), Positives = 193/233 (82%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEVSTA+DGAEALR+ATETRPDAIVLDIN
Sbjct: 4   MDTGANSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGATATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAN GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236


>tr|Q742K1|Q742K1_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 233

 Score =  357 bits (916), Expect = 6e-97
 Identities = 187/210 (89%), Positives = 189/210 (90%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGFEVSTA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 24  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  TATSSSETI VGPLE
Sbjct: 84  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGATATSSSETITVGPLE 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEAN GPRLLHTVRGVGFVLRMQ
Sbjct: 204 IGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 233


>tr|A0QBJ2|A0QBJ2_MYCA1 Tax_Id=243243 SubName: Full=Two component
           response transcriptional regulatory protein
           prra;[Mycobacterium avium]
          Length = 233

 Score =  357 bits (916), Expect = 6e-97
 Identities = 187/210 (89%), Positives = 189/210 (90%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGFEVSTA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 24  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  TATSSSETI VGPLE
Sbjct: 84  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGATATSSSETITVGPLE 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEAN GPRLLHTVRGVGFVLRMQ
Sbjct: 204 IGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 233


>tr|A0PKW8|A0PKW8_MYCUA Tax_Id=362242 (prrA)SubName: Full=Two
           component response transcriptional regulatory protein
           PrrA;[Mycobacterium ulcerans]
          Length = 236

 Score =  354 bits (908), Expect = 5e-96
 Identities = 189/232 (81%), Positives = 191/232 (82%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEVSTA+DGAEALR+ATETRPDAIVLDIN
Sbjct: 4   MDTGANSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSE I VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGATATSSSEIITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRM 232
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAN GPRLLHTVRGVGFVLRM
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRM 235


>sp|P0A5Z6|PRRA_MYCTU Tax_Id=1773 (prrA)RecName:
           Full=Transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis]
          Length = 233

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 1   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 60

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 121 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 233


>sp|P0A5Z7|PRRA_MYCBO Tax_Id=1765 (prrA)RecName:
           Full=Transcriptional regulatory protein
           prrA;[Mycobacterium bovis]
          Length = 233

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 1   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 60

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 121 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 233


>tr|C6DWJ0|C6DWJ0_MYCTK Tax_Id=478434 SubName: Full=Two component
           system transcriptional regulator prrA;[Mycobacterium
           tuberculosis]
          Length = 236

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 4   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|C1ALN7|C1ALN7_MYCBT Tax_Id=561275 (prrA)SubName: Full=Two
           component response transcriptional regulatory
           protein;[Mycobacterium bovis]
          Length = 236

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 4   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A5U0U2|A5U0U2_MYCTA Tax_Id=419947 (prrA)SubName: Full=Two
           component response transcriptional regulatory protein
           PrrA;[Mycobacterium tuberculosis]
          Length = 236

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 4   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A1KH35|A1KH35_MYCBP Tax_Id=410289 (prrA)SubName: Full=Two
           component response transcriptional regulatory protein
           prrA;[Mycobacterium bovis]
          Length = 236

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 4   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A5WKS5|A5WKS5_MYCTF Tax_Id=336982 SubName: Full=Two component
           system response transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis]
          Length = 236

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 4   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A4KFK7|A4KFK7_MYCTU Tax_Id=395095 SubName: Full=Two component
           response transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis str. Haarlem]
          Length = 236

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 4   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A2VGJ7|A2VGJ7_MYCTU Tax_Id=348776 SubName: Full=Two component
           response transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis C]
          Length = 236

 Score =  353 bits (905), Expect = 1e-95
 Identities = 188/233 (80%), Positives = 191/233 (81%)

Query: 1   MDTGXXXXXXXXXXXXXXXXXXXERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60
           MDTG                   ERGLRLSGFEV+TA+DGAEALR+ATE RPDAIVLDIN
Sbjct: 4   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 63

Query: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 120
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 123

Query: 121 XXXXXXXXTATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 124 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183

Query: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA  GPRLLHTVRGVGFVLRMQ
Sbjct: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A4T774|A4T774_MYCGI Tax_Id=350054 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium gilvum]
          Length = 231

 Score =  345 bits (885), Expect = 2e-93
 Identities = 181/210 (86%), Positives = 185/210 (88%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+V TA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 22  ERGLRLSGFDVFTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 81

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  TAT SSETI VGPLE
Sbjct: 82  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATFSSETITVGPLE 141

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARV+GVDVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 142 VDIPGRRARVDGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 201

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEAN  PRLLHTVRGVGFVLR Q
Sbjct: 202 IGYLRRKLEANGAPRLLHTVRGVGFVLRQQ 231


>tr|A1TF31|A1TF31_MYCVP Tax_Id=350058 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium vanbaalenii]
          Length = 233

 Score =  345 bits (885), Expect = 2e-93
 Identities = 181/210 (86%), Positives = 185/210 (88%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+V TA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 24  ERGLRLSGFDVYTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  TAT SSETI VGPLE
Sbjct: 84  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATFSSETITVGPLE 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARV+GVDVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 144 VDIPGRRARVDGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEAN  PRLLHTVRGVGFVLR Q
Sbjct: 204 IGYLRRKLEANGAPRLLHTVRGVGFVLRQQ 233


>tr|Q1B3I2|Q1B3I2_MYCSS Tax_Id=164756 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 233

 Score =  345 bits (884), Expect = 3e-93
 Identities = 181/210 (86%), Positives = 185/210 (88%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+VSTA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 24  ERGLRLSGFDVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  +AT SSETI VGPLE
Sbjct: 84  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSSATFSSETIQVGPLE 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEA   PRLLHTVRGVGFVLR Q
Sbjct: 204 IGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 233


>tr|A1ULL8|A1ULL8_MYCSK Tax_Id=189918 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 233

 Score =  345 bits (884), Expect = 3e-93
 Identities = 181/210 (86%), Positives = 185/210 (88%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+VSTA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 24  ERGLRLSGFDVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  +AT SSETI VGPLE
Sbjct: 84  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSSATFSSETIQVGPLE 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEA   PRLLHTVRGVGFVLR Q
Sbjct: 204 IGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 233


>tr|A0R407|A0R407_MYCS2 Tax_Id=246196 (prrA)SubName:
           Full=DNA-binding response regulator PrrA;[Mycobacterium
           smegmatis]
          Length = 236

 Score =  345 bits (884), Expect = 3e-93
 Identities = 181/210 (86%), Positives = 185/210 (88%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+VSTA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 27  ERGLRLSGFDVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  +AT SSETI VGPLE
Sbjct: 87  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSSATFSSETIQVGPLE 146

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 147 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 206

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEA   PRLLHTVRGVGFVLR Q
Sbjct: 207 IGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 236


>tr|A3Q618|A3Q618_MYCSJ Tax_Id=164757 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 233

 Score =  343 bits (880), Expect = 9e-93
 Identities = 180/210 (85%), Positives = 184/210 (87%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+VSTA+DGAEALR+ATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 24  ERGLRLSGFDVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSVDDRVAGLEAGADDYLVKPF                  +AT SSETI VGPLE
Sbjct: 84  VLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSSATFSSETIQVGPLE 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VDIPGRRARVNG DVDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 144 VDIPGRRARVNGADVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEA   PRLLHTVRGVGFVLR Q
Sbjct: 204 IGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 233


>tr|B1MJ92|B1MJ92_MYCA9 Tax_Id=561007 SubName: Full=Probable
           transcriptional regulatory protein PrrA;[Mycobacterium
           abscessus]
          Length = 233

 Score =  333 bits (855), Expect = 7e-90
 Identities = 175/210 (83%), Positives = 181/210 (86%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGFEV+TA DGAEALR ATE RPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC
Sbjct: 24  ERGLRLSGFEVNTASDGAEALRCATEHRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSAR+SVDDRVAGLEAGADDYL KPF                   ATSS+ETI VGPLE
Sbjct: 84  VLSARTSVDDRVAGLEAGADDYLTKPFVLAELVARVKALLRRRGAVATSSTETITVGPLE 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           V+IPGRRAR+NGV+VDLTKREFDLLAVLAEHKT VLSRAQLLELVWGYDFAADTNVVDVF
Sbjct: 144 VEIPGRRARINGVEVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           IGYLRRKLEA   PRLLHTVRGVGFVLR Q
Sbjct: 204 IGYLRRKLEAGGAPRLLHTVRGVGFVLRSQ 233


>tr|C0ZMN4|C0ZMN4_RHOE4 Tax_Id=234621 (prrA)SubName:
           Full=Two-component response regulator PrrA;[Rhodococcus
           erythropolis]
          Length = 234

 Score =  264 bits (675), Expect = 5e-69
 Identities = 137/211 (64%), Positives = 160/211 (75%), Gaps = 3/211 (1%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF V TA+DGA+ALR  ++ RPDA+VLDINMPVLDG  VVTALRA  N++P+C
Sbjct: 21  ERGLRLSGFTVLTAVDGADALRVISDKRPDAVVLDINMPVLDGTGVVTALRAAGNEIPIC 80

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSE---TIAVG 140
           VLSAR+SVDDR+AGLE+GADDY+VKPF                   A   SE   T+ VG
Sbjct: 81  VLSARNSVDDRIAGLESGADDYMVKPFVLAELVARIRAMLRRSNTPAGDHSEGTNTLRVG 140

Query: 141 PLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVV 200
            L++D+ GRR RV+G +V LTKREF+LL VLA +   VL+R +LLELVWGYDF ADTNVV
Sbjct: 141 NLDIDLSGRRVRVDGKEVPLTKREFELLEVLAHNSGIVLTRERLLELVWGYDFVADTNVV 200

Query: 201 DVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           DVFIGYLRRK E+   PRLLHTVRGVGFVLR
Sbjct: 201 DVFIGYLRRKFESGGSPRLLHTVRGVGFVLR 231


>tr|C3JDU5|C3JDU5_RHOER Tax_Id=596309 (prrA)SubName:
           Full=DNA-binding response regulator PrrA;[Rhodococcus
           erythropolis SK121]
          Length = 234

 Score =  264 bits (675), Expect = 5e-69
 Identities = 137/211 (64%), Positives = 160/211 (75%), Gaps = 3/211 (1%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF V TA+DGA+ALR  ++ RPDA+VLDINMPVLDG  VVTALRA  N++P+C
Sbjct: 21  ERGLRLSGFTVLTAVDGADALRVISDKRPDAVVLDINMPVLDGTGVVTALRAAGNEIPIC 80

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSE---TIAVG 140
           VLSAR+SVDDR+AGLE+GADDY+VKPF                   A   SE   T+ VG
Sbjct: 81  VLSARNSVDDRIAGLESGADDYMVKPFVLAELVARIRAMLRRSNTPAGDHSEGTNTLRVG 140

Query: 141 PLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVV 200
            L++D+ GRR RV+G +V LTKREF+LL VLA +   VL+R +LLELVWGYDF ADTNVV
Sbjct: 141 NLDIDLSGRRVRVDGKEVPLTKREFELLEVLAHNSGIVLTRERLLELVWGYDFVADTNVV 200

Query: 201 DVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           DVFIGYLRRK E+   PRLLHTVRGVGFVLR
Sbjct: 201 DVFIGYLRRKFESGGSPRLLHTVRGVGFVLR 231


>tr|C0ZNA6|C0ZNA6_RHOE4 Tax_Id=234621 SubName: Full=Probable OmpR
           family two-component response regulator;[Rhodococcus
           erythropolis]
          Length = 231

 Score =  259 bits (662), Expect = 2e-67
 Identities = 132/210 (62%), Positives = 155/210 (73%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+ +TA+DG  AL +  +  P A+VLD+NMP LDGV VVTALRA+ N+VP+C
Sbjct: 21  ERGLRLSGFDTATAVDGRSALSSVNKQCPAALVLDVNMPGLDGVGVVTALRAIGNEVPIC 80

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSV DR+AGLEAGADDYL KPF                     S    I VGPL 
Sbjct: 81  VLSARSSVGDRIAGLEAGADDYLTKPFELAELVARLRALLRRTTRATPSVDHPITVGPLT 140

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VD+ G RA ++G  ++LTKREFDLL+VLAEH   VLSRAQLL LVWGYDFAADTNVVDVF
Sbjct: 141 VDLRGHRAHIDGGRIELTKREFDLLSVLAEHAGVVLSRAQLLRLVWGYDFAADTNVVDVF 200

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           + YLR+KLE +  PR++HTVRGVGFVLR +
Sbjct: 201 VTYLRKKLEVDGAPRVIHTVRGVGFVLRAE 230


>tr|C3JP12|C3JP12_RHOER Tax_Id=596309 (prrA)SubName:
           Full=DNA-binding response regulator PrrA;[Rhodococcus
           erythropolis SK121]
          Length = 234

 Score =  259 bits (662), Expect = 2e-67
 Identities = 132/210 (62%), Positives = 155/210 (73%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF+ +TA+DG  AL +  +  P A+VLD+NMP LDGV VVTALRA+ N+VP+C
Sbjct: 24  ERGLRLSGFDTATAVDGRSALSSVNKQCPAALVLDVNMPGLDGVGVVTALRAIGNEVPIC 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLE 143
           VLSARSSV DR+AGLEAGADDYL KPF                     S    I VGPL 
Sbjct: 84  VLSARSSVGDRIAGLEAGADDYLTKPFELAELVARLRALLRRTTRATPSVDHPITVGPLT 143

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VD+ G RA ++G  ++LTKREFDLL+VLAEH   VLSRAQLL LVWGYDFAADTNVVDVF
Sbjct: 144 VDLRGHRAHIDGRRIELTKREFDLLSVLAEHAGVVLSRAQLLRLVWGYDFAADTNVVDVF 203

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
           + YLR+KLE +  PR++HTVRGVGFVLR +
Sbjct: 204 VTYLRKKLEVDGAPRVIHTVRGVGFVLRAE 233


>tr|Q5Z232|Q5Z232_NOCFA Tax_Id=37329 SubName: Full=Putative
           two-component system response regulator;[Nocardia
           farcinica]
          Length = 238

 Score =  257 bits (657), Expect = 6e-67
 Identities = 135/210 (64%), Positives = 158/210 (75%), Gaps = 2/210 (0%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF V  A DGA ALR+     PDA+VLD+NMPVLDG  VVTALRA+ NDVP+C
Sbjct: 26  ERGLRLSGFHVLVARDGAAALRSVNADCPDAVVLDMNMPVLDGAGVVTALRALGNDVPIC 85

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXT--ATSSSETIAVGP 141
           VLSAR+SVDDR++GLE+GADDYLVKPF                     A ++   I VGP
Sbjct: 86  VLSARASVDDRISGLESGADDYLVKPFVLAELVARIKALLRRRTDAPAAAATPGAITVGP 145

Query: 142 LEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVD 201
           LEVD  G RA ++G +++LTKREF+LL+ LA +   VLSR +LLELVWGYDFAADTNVVD
Sbjct: 146 LEVDEAGYRALLHGREIELTKREFELLSTLARNAGVVLSRERLLELVWGYDFAADTNVVD 205

Query: 202 VFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           VF+GYLRRKLEA+  PRLLHT+RGVGFVLR
Sbjct: 206 VFVGYLRRKLEADGTPRLLHTIRGVGFVLR 235


>tr|C1ATP4|C1ATP4_RHOOB Tax_Id=632772 SubName: Full=OmpR family
           two-component response regulator;[Rhodococcus opacus]
          Length = 238

 Score =  251 bits (641), Expect = 4e-65
 Identities = 131/213 (61%), Positives = 155/213 (72%), Gaps = 5/213 (2%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF V TA+DGA+ALR  +E RPDA+VLD+NMPV+DG  VVTALRAM ND+P+C
Sbjct: 23  ERGLRLSGFTVLTAVDGADALRVVSEQRPDAMVLDMNMPVIDGTGVVTALRAMSNDIPIC 82

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSET-----IA 138
           VLSAR +VDDR++GLE+GADDYLVKPF                  T  + +++     I 
Sbjct: 83  VLSARDTVDDRISGLESGADDYLVKPFVLAELIARIRAMLRRHGTTTAAPADSQATPPIR 142

Query: 139 VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTN 198
           VG LE+    RR  + G +V LTKREF+LL VLA +   VLSR +LLELVWGYDF ADTN
Sbjct: 143 VGALEIRTSARRVFMAGEEVTLTKREFELLEVLARNVGIVLSRERLLELVWGYDFVADTN 202

Query: 199 VVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           VVDVF+GYLRRK E    PR+LHTVRGVGFVLR
Sbjct: 203 VVDVFVGYLRRKFEVGGQPRILHTVRGVGFVLR 235


>tr|Q0S6Q4|Q0S6Q4_RHOSR Tax_Id=101510 SubName: Full=Response
           regulator, two-component system;[Rhodococcus sp.]
          Length = 238

 Score =  249 bits (637), Expect = 1e-64
 Identities = 131/213 (61%), Positives = 156/213 (73%), Gaps = 5/213 (2%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ERGLRLSGF V TA+DGA+ALR  +E RPDA+VLD+NMPV+DG  VVTALRAM+ND+P+C
Sbjct: 23  ERGLRLSGFTVLTAVDGADALRVVSERRPDAMVLDMNMPVIDGTGVVTALRAMNNDIPIC 82

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATS-----SSETIA 138
           VLSAR +VDDR++GLE+GADDYLVKPF                  TA +     ++  I 
Sbjct: 83  VLSARDTVDDRISGLESGADDYLVKPFVLAELIARIRAMLRRHGTTAAAPAGSPATPPIR 142

Query: 139 VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTN 198
           VG LE+    RR  + G +V LTKREF+LL VLA +   VLSR +LLELVWGYDF ADTN
Sbjct: 143 VGALEIRTSARRVFMAGEEVTLTKREFELLEVLARNVGIVLSRERLLELVWGYDFVADTN 202

Query: 199 VVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           VVDVF+GYLRRK E    PR+L+TVRGVGFVLR
Sbjct: 203 VVDVFVGYLRRKFEVGGQPRILYTVRGVGFVLR 235


>tr|A0QP21|A0QP21_MYCS2 Tax_Id=246196 SubName: Full=Two component
           response transcriptional regulatory protein
           prra;[Mycobacterium smegmatis]
          Length = 246

 Score =  234 bits (596), Expect = 7e-60
 Identities = 124/207 (59%), Positives = 147/207 (71%), Gaps = 1/207 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGLR SGF+V  A  G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 38  RGLRHSGFDVRVAASGKEALRLLSTESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 97

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           LSAR +V+DR+AGLEAGADDYL KPF                  T    S+T+ VGP+ +
Sbjct: 98  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRASHTE-QPSDTMTVGPVTI 156

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 157 DTARRLVFVSGERVDLTKREFDLLAVLAENAGVVLSRQRLLELVWGYDFDVDTNVADVFI 216

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
            YLRRKLE +  PR++HTVRG+G+VLR
Sbjct: 217 SYLRRKLERDGVPRVIHTVRGIGYVLR 243


>tr|Q1BFP8|Q1BFP8_MYCSS Tax_Id=164756 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 243

 Score =  233 bits (595), Expect = 1e-59
 Identities = 124/207 (59%), Positives = 148/207 (71%), Gaps = 1/207 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGLR SGF+V  A +G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 35  RGLRHSGFDVRVAANGKEALRLLSAESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 94

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           LSAR +V+DR+AGLEAGADDYL KPF                  +    S+T+ VGPL +
Sbjct: 95  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DRPSDTMTVGPLTI 153

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 154 DTARRLVFVDGERVDLTKREFDLLAVLAENNGVVLSRQRLLELVWGYDFDVDTNVADVFI 213

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
            YLRRKLE +  PR++HTVRG+G+VLR
Sbjct: 214 SYLRRKLERDGLPRVIHTVRGIGYVLR 240


>tr|A3PSU1|A3PSU1_MYCSJ Tax_Id=164757 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 243

 Score =  233 bits (595), Expect = 1e-59
 Identities = 124/207 (59%), Positives = 148/207 (71%), Gaps = 1/207 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGLR SGF+V  A +G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 35  RGLRHSGFDVRVAANGKEALRLLSAESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 94

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           LSAR +V+DR+AGLEAGADDYL KPF                  +    S+T+ VGPL +
Sbjct: 95  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DRPSDTMTVGPLTI 153

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 154 DTARRLVFVDGERVDLTKREFDLLAVLAENNGVVLSRQRLLELVWGYDFDVDTNVADVFI 213

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
            YLRRKLE +  PR++HTVRG+G+VLR
Sbjct: 214 SYLRRKLERDGLPRVIHTVRGIGYVLR 240


>tr|A1U984|A1U984_MYCSK Tax_Id=189918 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 243

 Score =  233 bits (595), Expect = 1e-59
 Identities = 124/207 (59%), Positives = 148/207 (71%), Gaps = 1/207 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGLR SGF+V  A +G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 35  RGLRHSGFDVRVAANGKEALRLLSAESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 94

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           LSAR +V+DR+AGLEAGADDYL KPF                  +    S+T+ VGPL +
Sbjct: 95  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DRPSDTMTVGPLTI 153

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 154 DTARRLVFVDGERVDLTKREFDLLAVLAENNGVVLSRQRLLELVWGYDFDVDTNVADVFI 213

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
            YLRRKLE +  PR++HTVRG+G+VLR
Sbjct: 214 SYLRRKLERDGLPRVIHTVRGIGYVLR 240


>tr|B1MNV8|B1MNV8_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcriptional regulatory protein PrrA;[Mycobacterium
           abscessus]
          Length = 236

 Score =  228 bits (582), Expect = 3e-58
 Identities = 118/208 (56%), Positives = 146/208 (70%), Gaps = 1/208 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGLR SGF+V  A+DG +AL       PDA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 26  RGLRHSGFDVRVAVDGRDALTQLAADEPDALVLDVQMPELDGVAVVTALRALGNDIPICV 85

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSET-IAVGPLE 143
           LSAR +V+DR+AGLEAGADDYL KPF                   +   +++ I VG + 
Sbjct: 86  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLRALLRRRGAGSGGLADSAITVGQIT 145

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           VD+  R   VNG  V+L+KREFDLL VLAE+   VLSR +LLELVWGYDF  +TNV DVF
Sbjct: 146 VDVSRRLVFVNGERVELSKREFDLLVVLAENTGVVLSRTRLLELVWGYDFDVETNVADVF 205

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           + YLRRKLEA    R++HTVRGVG+V+R
Sbjct: 206 VSYLRRKLEAGGAARVIHTVRGVGYVMR 233


>tr|A4T3R2|A4T3R2_MYCGI Tax_Id=350054 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium gilvum]
          Length = 248

 Score =  226 bits (575), Expect = 2e-57
 Identities = 120/207 (57%), Positives = 145/207 (70%), Gaps = 1/207 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGLR SGF+V  A  G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 40  RGLRHSGFDVRVAATGKEALRLLSSESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 99

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           LSAR +V+DR+AGLEAGADDYL KPF                  +   +S+T+ VG L +
Sbjct: 100 LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DPTSDTMTVGSLTI 158

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R   V G  V+LTKREFDLLA LAE+   VLSR +LLELVWGYDF  DTNV DVF+
Sbjct: 159 DTARRLVFVAGERVELTKREFDLLAALAENAGVVLSRQRLLELVWGYDFDVDTNVADVFV 218

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
            YLRRKLE +  PR++HTVRG+G+VLR
Sbjct: 219 SYLRRKLERDGLPRVIHTVRGIGYVLR 245


>tr|A1T1J1|A1T1J1_MYCVP Tax_Id=350058 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium vanbaalenii]
          Length = 244

 Score =  226 bits (575), Expect = 2e-57
 Identities = 120/209 (57%), Positives = 145/209 (69%), Gaps = 1/209 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGLR SGF+V  A  G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 36  RGLRHSGFDVRVAATGKEALRLLSSESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 95

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           LSAR +V+DR+AGLEAGADDYL KPF                  +   +S+T+ VG L +
Sbjct: 96  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DPTSDTMTVGSLTI 154

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R   V G  V+LTKREFDLLA LAE+   VLSR +LLELVWGYDF  DTNV DVF+
Sbjct: 155 DTARRLVFVAGERVELTKREFDLLAALAENAGVVLSRQRLLELVWGYDFDVDTNVADVFV 214

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233
            YLRRKLE    PR++HTVRG+G+VLR +
Sbjct: 215 SYLRRKLEREGLPRVIHTVRGIGYVLRAE 243


>tr|Q82Q73|Q82Q73_STRAW Tax_Id=33903 SubName: Full=Putative
           two-component system response regulator;[Streptomyces
           avermitilis]
          Length = 228

 Score =  187 bits (476), Expect = 6e-46
 Identities = 107/209 (51%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 26  GLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVL 85
           GL L GF V  A DG  AL    +  P  IVLD+ MP L GV VV +LRA    +PVC+L
Sbjct: 17  GLGLEGFTVRLAEDGENALEQVADRLPSVIVLDVTMPGLSGVEVVQSLRAQGRTLPVCML 76

Query: 86  SARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETI---AVGPL 142
           SAR  VDDRVAGL A ADDY+VKPF                       S  +    +G +
Sbjct: 77  SARDEVDDRVAGLAARADDYVVKPFSIAELAARLHAIVRLHAIVRLHESTAVRPLVIGDV 136

Query: 143 EVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDV 202
            ++   R A   G D+ LT REFDLL  LA     VLSRAQLLE VWGY +  DTNVVDV
Sbjct: 137 TIEPARRVAARAGRDLHLTTREFDLLLALAHRPGQVLSRAQLLEQVWGYTWDVDTNVVDV 196

Query: 203 FIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           FIGYLR+KLEA+  PR+L TVRG+G VLR
Sbjct: 197 FIGYLRKKLEADGRPRILQTVRGIGLVLR 225


>tr|Q5YPS5|Q5YPS5_NOCFA Tax_Id=37329 SubName: Full=Putative
           two-component system response regulator;[Nocardia
           farcinica]
          Length = 228

 Score =  184 bits (467), Expect = 7e-45
 Identities = 97/207 (46%), Positives = 127/207 (61%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L  +G+ V  A+DG +AL  AT  RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLTFNGYTVDLAVDGVDALEKATAQRPDALVLDVMMPRLDGLEVCRRLRSTGDDLPILV 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           L+AR SV +RVAGL+AGADDYL KPF                      +SET+    L +
Sbjct: 78  LTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRRAPDPGDTSETLRFADLSL 137

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R        + LT+ EF LL +L  +   VL+R+++LE VWGYDF    N ++V+I
Sbjct: 138 DPVTREVSRGDRAISLTRTEFSLLEMLMANPRRVLTRSRILEEVWGYDFPTSGNALEVYI 197

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
           GYLRRK EA   PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEAEGEPRLIHTVRGVGYVLR 224


>tr|C2AMB6|C2AMB6_TSUPA Tax_Id=521096 SubName: Full=Response
           regulator with CheY-like receiver domain and
           winged-helix DNA-binding domain;[Tsukamurella
           paurometabola DSM 20162]
          Length = 228

 Score =  184 bits (467), Expect = 7e-45
 Identities = 94/207 (45%), Positives = 128/207 (61%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L  +G++V TA+DG +AL +    RPDA+VLD+NMP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLTFNGYQVDTAVDGQDALDHIASNRPDALVLDLNMPRLDGLEVCRRLRSAGDDLPILV 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           L+AR  V DRV+GL+AGADDYL KPF                     S +E +    L +
Sbjct: 78  LTARDGVSDRVSGLDAGADDYLPKPFALEELLARMRALLRRAVPDTASDNEVLRFEDLTL 137

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R        + LT+ EF LL +L  +   VL+R+++LE VWGYDF    N ++V++
Sbjct: 138 DPATREVSRGDRSISLTRTEFSLLEMLMGNPRRVLTRSRILEEVWGYDFPTSGNALEVYV 197

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
           GYLRRK EA+  PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEADGEPRLIHTVRGVGYVLR 224


>tr|Q2JDV8|Q2JDV8_FRASC Tax_Id=106370 SubName: Full=Two component
           transcriptional regulator, winged helix family;[Frankia
           sp.]
          Length = 235

 Score =  181 bits (460), Expect = 4e-44
 Identities = 99/216 (45%), Positives = 130/216 (60%), Gaps = 8/216 (3%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ER LR  G+EV+TA+DGA+AL      RPD +VLD+ MP +DG+     LRA  +DVPV 
Sbjct: 13  ERSLRFEGYEVATAVDGADALDVIGRERPDIVVLDVMMPRVDGLETCRRLRAQGDDVPVL 72

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSS--------E 135
           +L+AR  + DRV+GL+ GADDYLVKPF                   A   +         
Sbjct: 73  MLTARDGLADRVSGLDVGADDYLVKPFALEELFARLRALIRRAALAARVRAAGSRGIPDS 132

Query: 136 TIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAA 195
           T+  G + +D   R+      ++ LTK EF+LL +   H   VLSR+ ++E VWGYDF  
Sbjct: 133 TLRYGGVCLDQVSRQVTRGDRELILTKTEFELLELFLAHPRQVLSRSMIMERVWGYDFGP 192

Query: 196 DTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
            +N ++VF+ YLRRKLEAN  PRLLHTVRGVG+VLR
Sbjct: 193 TSNSLEVFVSYLRRKLEANGEPRLLHTVRGVGYVLR 228


>tr|Q0RPN0|Q0RPN0_FRAAA Tax_Id=326424 SubName: Full=Putative
           Transcriptional regulatory protein;[Frankia alni]
          Length = 250

 Score =  181 bits (458), Expect = 7e-44
 Identities = 98/220 (44%), Positives = 130/220 (59%), Gaps = 12/220 (5%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           ER LR  G+EV+TA+DGA+AL      +PD +VLD+ MP +DG+     LRA  +DVPV 
Sbjct: 24  ERSLRFEGYEVTTAVDGADALDAVCRDQPDIVVLDVMMPRIDGLETCRQLRARGDDVPVL 83

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGP-- 141
           +L+AR  + DRV+GL+ GADDYLVKPF                   A ++    A GP  
Sbjct: 84  MLTARDGLADRVSGLDVGADDYLVKPFALEELFARLRALTRRAALAARAAGAGGAGGPGA 143

Query: 142 ----------LEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGY 191
                     + +D   R+      ++ LTK EF+LL +   H   VLSR+ ++E VWGY
Sbjct: 144 LADSVLRYGGVSLDQASRQVTRGERELTLTKTEFELLELFLSHPRQVLSRSMIMERVWGY 203

Query: 192 DFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           DF   +N ++VF+ YLRRKLEA   PRLLHTVRGVG+VLR
Sbjct: 204 DFGPTSNSLEVFVSYLRRKLEAGGEPRLLHTVRGVGYVLR 243


>tr|C1A3C1|C1A3C1_RHOE4 Tax_Id=234621 (mprA)SubName:
           Full=Two-component response regulator MprA;[Rhodococcus
           erythropolis]
          Length = 228

 Score =  180 bits (456), Expect = 1e-43
 Identities = 94/207 (45%), Positives = 126/207 (60%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L  +G+ V  A+DG +AL      RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLSFNGYTVELAVDGLDALEKILANRPDAVVLDVMMPRLDGLEVCRRLRSAGDDLPILV 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           L+AR SV +RVAGL+AGADDYL KPF                     + SE +A   L +
Sbjct: 78  LTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRTAPDLDADSEMMAFEDLTL 137

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R  +     + LT+ EF LL +L  +   VL+R ++LE VWGYDF    N ++V++
Sbjct: 138 DPVTREVKRGERSISLTRTEFSLLEMLMANPRRVLTRGRILEEVWGYDFPTSGNALEVYV 197

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
           GYLRRK EA+  PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEADGEPRLIHTVRGVGYVLR 224


>tr|C3JXB5|C3JXB5_RHOER Tax_Id=596309 SubName: Full=Response
           regulator;[Rhodococcus erythropolis SK121]
          Length = 228

 Score =  180 bits (456), Expect = 1e-43
 Identities = 94/207 (45%), Positives = 126/207 (60%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L  +G+ V  A+DG +AL      RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLSFNGYTVELAVDGLDALEKILANRPDAVVLDVMMPRLDGLEVCRRLRSAGDDLPILV 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           L+AR SV +RVAGL+AGADDYL KPF                     + SE +A   L +
Sbjct: 78  LTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRTAPDLDADSEMMAFEDLTL 137

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R  +     + LT+ EF LL +L  +   VL+R ++LE VWGYDF    N ++V++
Sbjct: 138 DPVTREVKRGERSISLTRTEFSLLEMLMANPRRVLTRGRILEEVWGYDFPTSGNALEVYV 197

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
           GYLRRK EA+  PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEADGEPRLIHTVRGVGYVLR 224


>sp|A0R3I8|MPRA_MYCS2 Tax_Id=246196 (mprA)RecName: Full=Response
           regulator mprA; AltName: Full=Mycobacterial persistence
           regulator A;[Mycobacterium smegmatis]
          Length = 230

 Score =  179 bits (453), Expect = 3e-43
 Identities = 94/207 (45%), Positives = 125/207 (60%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L  +G+ V  A DG EAL   T  RPDA++LD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 20  RSLSFNGYSVELAQDGVEALDAITNNRPDALILDVMMPRLDGLEVCRQLRSTGDDLPILV 79

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           L+AR SV +RVAGL+AGADDYL KPF                    +  S+ +    L +
Sbjct: 80  LTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTVSDDSGDSQKMTFSDLTL 139

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R     G  + LT+ EF LL +L  +   VL+R+++LE VWG+DF    N ++V+I
Sbjct: 140 DPVTREVTRGGRQISLTRTEFSLLEMLIANPRRVLTRSRILEEVWGFDFPTSGNALEVYI 199

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
           GYLRRK EA   PRL+HTVRGVG+VLR
Sbjct: 200 GYLRRKTEAEGEPRLIHTVRGVGYVLR 226


>tr|B5GEX2|B5GEX2_9ACTO Tax_Id=465543 SubName: Full=Two-component
           system response regulator;[Streptomyces sp. SPB74]
          Length = 244

 Score =  178 bits (452), Expect = 4e-43
 Identities = 97/211 (45%), Positives = 125/211 (59%), Gaps = 4/211 (1%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L   G+ V  A DG EALR A  T PD +VLDI MP +DG++    LRA  + VPV +
Sbjct: 30  RSLVFEGYGVEVAADGHEALRQAAATPPDLVVLDIQMPGMDGLTAARRLRATGSTVPVLM 89

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXT----ATSSSETIAVG 140
           L+AR +V DRV GL+AGADDYLVKPF                       A    ET++ G
Sbjct: 90  LTARDTVGDRVTGLDAGADDYLVKPFELDELFARIRALLRRSSYAVAEQAADDEETLSFG 149

Query: 141 PLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVV 200
            L +++  R     G  V+LT+ EF LL +   H   VL+R Q+L+ VWG+DF   +N +
Sbjct: 150 DLRMNLATREVTRGGRAVELTRTEFTLLEMFLAHPRQVLTREQILKTVWGFDFEPSSNSL 209

Query: 201 DVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           DV++ YLRRK EA   PRL+HTVRGVG+VLR
Sbjct: 210 DVYVMYLRRKTEAGGEPRLVHTVRGVGYVLR 240


>tr|C7Q9Q8|C7Q9Q8_CATAD Tax_Id=479433 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Catenulispora acidiphila]
          Length = 229

 Score =  177 bits (450), Expect = 6e-43
 Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 1/208 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L  +G+EV  A DG  AL    + RPDA+VLD+ MP LDG+     LR+   D+PV +
Sbjct: 18  RSLAFNGYEVELAADGLAALEAIAKRRPDAVVLDVMMPRLDGLETCRRLRSAGEDLPVLL 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSET-IAVGPLE 143
           L+AR +V DRVAGL+AGADDYL KPF                  +    S+  +A   L 
Sbjct: 78  LTARDAVPDRVAGLDAGADDYLPKPFALEELLARLRALLRRTQGSLADQSDAPLAFADLT 137

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           +D   R     G  V LT+ EF+LL +L  H   VL+RAQ+LE VWGYDF    N ++V+
Sbjct: 138 LDPATREVTRAGKPVRLTRTEFNLLELLMRHPRQVLTRAQILEEVWGYDFPTTANSLEVY 197

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           +GYLRRK EA+  PRL+HTVRGVG+ LR
Sbjct: 198 VGYLRRKTEADELPRLIHTVRGVGYSLR 225


>tr|C6WMN8|C6WMN8_ACTMD Tax_Id=446462 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Actinosynnema mirum]
          Length = 229

 Score =  177 bits (450), Expect = 6e-43
 Identities = 96/208 (46%), Positives = 124/208 (59%), Gaps = 1/208 (0%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R LR  G+EV+TA DGA+AL      RPD ++LD+ MPVL G+    ALRA  +  PV +
Sbjct: 18  RTLRFEGYEVTTAHDGAQALDLVRSLRPDGVILDVTMPVLGGLDACRALRASGDTTPVLM 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSS-SETIAVGPLE 143
           L+AR+ V DRVAGL+AGADDYL KPF                    T++ SE +    L 
Sbjct: 78  LTARAEVSDRVAGLDAGADDYLAKPFALQELLARVRALVRRGGYAGTAARSEALRFADLL 137

Query: 144 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVF 203
           +D   R  R     V LT+ EF +L     +   VLSR  +   VWG+DF A +N +DV+
Sbjct: 138 LDAGTREVRRGDRQVALTRTEFSILETFLRNPRLVLSREAMFRTVWGHDFGAGSNGLDVY 197

Query: 204 IGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           +GYLRRKLE +  PRL+HTVRGVG+VLR
Sbjct: 198 VGYLRRKLEQDGEPRLIHTVRGVGYVLR 225


>tr|A7NM12|A7NM12_ROSCS Tax_Id=383372 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Roseiflexus castenholzii]
          Length = 224

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 3/207 (1%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           RGL   G+ V  A DG +AL  A E  PD +VLD+ +P +DG+ V   LRA  +DVP+ +
Sbjct: 19  RGLTFEGYNVEIAADGRQALEIARERPPDLVVLDLMLPGIDGLEVARRLRAA-SDVPIIM 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           L+AR +V DRVAGLEAGADDYL+KPF                    T++   +  GPL +
Sbjct: 78  LTARDAVPDRVAGLEAGADDYLIKPFAFEELLARIRVQLRRRQREDTAT--VLRYGPLTM 135

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D+      +    VDLT +E+DLL +   H   V++R  + + VWGY+F  ++N+++V++
Sbjct: 136 DLTAHEVTIGDRRVDLTAKEYDLLELFMRHPQQVMTRDVIYDRVWGYNFGGESNIIEVYV 195

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
            YLR+KLEA   PRL+HTVRGVG++LR
Sbjct: 196 RYLRQKLEARGEPRLIHTVRGVGYILR 222


>tr|Q82G51|Q82G51_STRAW Tax_Id=33903 (mprA)SubName: Full=Putative
           two-component system response regulator;[Streptomyces
           avermitilis]
          Length = 243

 Score =  176 bits (445), Expect = 2e-42
 Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 24  ERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83
           +R L   G++   A+DGA+AL  AT  +PD +VLDI MP +DG++    +R      P+ 
Sbjct: 27  QRSLAFEGYDTEVAVDGADALEKATAYQPDLVVLDIQMPRMDGLTAARRIRGAGTTTPIL 86

Query: 84  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATS----SSETIAV 139
           +L+AR +V DRV GL+AGADDYLVKPF                   AT+      + +  
Sbjct: 87  MLTARDTVGDRVTGLDAGADDYLVKPFELDELFARIRALLRRSSYAATAVGVPEDDALTF 146

Query: 140 GPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNV 199
           G L +D+  R     G  V+L + EF LL +   H   VL+R Q+L+ VWG+DF   +N 
Sbjct: 147 GDLRMDLATREVTRGGRSVELIRTEFTLLEMFLAHPRQVLTREQILKAVWGFDFEPSSNS 206

Query: 200 VDVFIGYLRRKLEANSGPRLLHTVRGVGFVLR 231
           +DV++ YLRRK EA   PRL+HTVRGVG+VLR
Sbjct: 207 LDVYVMYLRRKTEAGGEPRLVHTVRGVGYVLR 238


>tr|C6WJE3|C6WJE3_ACTMD Tax_Id=446462 SubName: Full=Two component
           transcriptional regulator, winged helix family; Flags:
           Precursor;[Actinosynnema mirum]
          Length = 228

 Score =  176 bits (445), Expect = 2e-42
 Identities = 93/207 (44%), Positives = 123/207 (59%)

Query: 25  RGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84
           R L+ +G++V  A DG +AL +    RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLQFNGYQVDLAGDGQQALESVLSQRPDAMVLDVMMPRLDGLEVCRRLRSTGDDLPILV 77

Query: 85  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETIAVGPLEV 144
           L+AR +V DRV+GL+AGADDYL KPF                          +    LE+
Sbjct: 78  LTARDAVSDRVSGLDAGADDYLPKPFALEELLARLRALLRRTATDVEEPVNLLRFADLEL 137

Query: 145 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLSRAQLLELVWGYDFAADTNVVDVFI 204
           D   R  R     + LT+ EF LL +   H   VL+R ++LE VWGYDF    N ++V++
Sbjct: 138 DPGTRDVRRGERPISLTRTEFALLELFLAHPKQVLTRGRILEDVWGYDFPTSGNALEVYV 197

Query: 205 GYLRRKLEANSGPRLLHTVRGVGFVLR 231
           GYLRRK EA   PRLLHTVRGVG+VLR
Sbjct: 198 GYLRRKTEAGGEPRLLHTVRGVGYVLR 224


  Database: Amellifera_nr
    Posted date:  Jan 15, 2010  5:10 AM
  Number of letters in database: 3,808,957,724
  Number of sequences in database:  11,153,314
  
Lambda     K      H
   0.320    0.136    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11153314
Number of Hits to DB: 1,237,734,861
Number of extensions: 40210407
Number of successful extensions: 208967
Number of sequences better than 10.0: 52441
Number of HSP's gapped: 168626
Number of HSP's successfully gapped: 54376
Length of query: 233
Length of database: 3,808,957,724
Length adjustment: 133
Effective length of query: 100
Effective length of database: 2,325,566,962
Effective search space: 232556696200
Effective search space used: 232556696200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)