BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML2186 (384 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q50049|DUS_MYCLE Tax_Id=1769 (dus)RecName: Full=Probable tRNA... 732 0.0 tr|B8ZST6|B8ZST6_MYCLB Tax_Id=561304 SubName: Full=Transcription... 732 0.0 tr|A0QAV6|A0QAV6_MYCA1 Tax_Id=243243 SubName: Full=Dihydrouridin... 605 e-171 tr|Q743C8|Q743C8_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 602 e-170 sp|O53835|DUS_MYCTU Tax_Id=1773 (dus)RecName: Full=Probable tRNA... 595 e-168 tr|C6DVC8|C6DVC8_MYCTK Tax_Id=478434 SubName: Full=Transcription... 595 e-168 tr|A5U0L2|A5U0L2_MYCTA Tax_Id=419947 SubName: Full=NifR3/SMM1 fa... 595 e-168 tr|A5WKJ2|A5WKJ2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 595 e-168 tr|A2VGC3|A2VGC3_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 595 e-168 tr|Q7U170|Q7U170_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC... 593 e-168 tr|C1ALF8|C1ALF8_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 593 e-168 tr|A1KGV6|A1KGV6_MYCBP Tax_Id=410289 SubName: Full=Possible tran... 593 e-168 tr|B2HH06|B2HH06_MYCMM Tax_Id=216594 SubName: Full=Transcription... 590 e-166 tr|A0PLD2|A0PLD2_MYCUA Tax_Id=362242 SubName: Full=Transcription... 585 e-165 tr|A4T7F4|A4T7F4_MYCGI Tax_Id=350054 SubName: Full=Putative TIM-... 565 e-159 tr|Q1B3B8|Q1B3B8_MYCSS Tax_Id=164756 SubName: Full=Dihydrouridin... 565 e-159 tr|A1ULT2|A1ULT2_MYCSK Tax_Id=189918 SubName: Full=Putative TIM-... 565 e-159 tr|A0R4B5|A0R4B5_MYCS2 Tax_Id=246196 SubName: Full=tRNA-dihydrou... 563 e-158 tr|A3Q683|A3Q683_MYCSJ Tax_Id=164757 SubName: Full=Putative TIM-... 562 e-158 tr|A1TFA7|A1TFA7_MYCVP Tax_Id=350058 SubName: Full=Putative TIM-... 561 e-158 tr|B1MI27|B1MI27_MYCA9 Tax_Id=561007 SubName: Full=Probable tRNA... 548 e-154 tr|Q0S733|Q0S733_RHOSR Tax_Id=101510 SubName: Full=Probable tRNA... 524 e-147 tr|C1ATD3|C1ATD3_RHOOB Tax_Id=632772 SubName: Full=Putative tRNA... 521 e-146 tr|C0ZP03|C0ZP03_RHOE4 Tax_Id=234621 SubName: Full=Putative tRNA... 511 e-143 tr|C3JEH0|C3JEH0_RHOER Tax_Id=596309 SubName: Full=Putative tRNA... 511 e-143 tr|D0L3U2|D0L3U2_9ACTO Tax_Id=526226 SubName: Full=TIM-barrel pr... 503 e-140 tr|A4KFD4|A4KFD4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 498 e-139 tr|Q4JXC2|Q4JXC2_CORJK Tax_Id=306537 SubName: Full=Putative unch... 479 e-133 tr|C8RS32|C8RS32_CORJE Tax_Id=525262 SubName: Full=tRNA-dihydrou... 479 e-133 tr|C2AKX2|C2AKX2_TSUPA Tax_Id=521096 SubName: Full=Putative TIM-... 479 e-133 tr|B1VII2|B1VII2_CORU7 Tax_Id=504474 SubName: Full=Putative unch... 475 e-132 tr|Q8NMK3|Q8NMK3_CORGL Tax_Id=1718 SubName: Full=Predicted TIM-b... 474 e-132 tr|C2CTC8|C2CTC8_CORST Tax_Id=525268 SubName: Full=Possible tRNA... 474 e-132 tr|Q8FMP2|Q8FMP2_COREF Tax_Id=152794 SubName: Full=Putative tran... 471 e-131 tr|C8NK90|C8NK90_COREF Tax_Id=196164 SubName: Full=tRNA-dihydrou... 471 e-131 tr|A4QGW8|A4QGW8_CORGB Tax_Id=340322 SubName: Full=Putative unch... 467 e-129 tr|C2BMH5|C2BMH5_9CORY Tax_Id=525264 SubName: Full=Possible dihy... 463 e-128 tr|C6RCI7|C6RCI7_9CORY Tax_Id=553206 SubName: Full=Dihydrouridin... 462 e-128 tr|C0WH14|C0WH14_9CORY Tax_Id=525260 SubName: Full=Dihydrouridin... 460 e-127 tr|C3PIT8|C3PIT8_CORA7 Tax_Id=548476 SubName: Full=Putative unch... 460 e-127 tr|A4FQC1|A4FQC1_SACEN Tax_Id=405948 SubName: Full=Dihydrouridin... 459 e-127 tr|C5VFJ9|C5VFJ9_9CORY Tax_Id=553207 SubName: Full=Putative tRNA... 459 e-127 tr|C7MRB7|C7MRB7_SACVD Tax_Id=471857 SubName: Full=Putative TIM-... 459 e-127 tr|C0E5G0|C0E5G0_9CORY Tax_Id=566549 SubName: Full=Putative unch... 457 e-126 tr|Q5Z290|Q5Z290_NOCFA Tax_Id=37329 SubName: Full=Putative dihyd... 451 e-125 tr|C6WPQ6|C6WPQ6_ACTMD Tax_Id=446462 SubName: Full=TIM-barrel pr... 448 e-124 tr|Q6NFI5|Q6NFI5_CORDI Tax_Id=1717 SubName: Full=Putative export... 439 e-121 tr|C4LH79|C4LH79_CORK4 Tax_Id=645127 SubName: Full=Putative unch... 439 e-121 tr|C8NYZ4|C8NYZ4_9CORY Tax_Id=585529 (dusB)SubName: Full=tRNA-di... 429 e-118 tr|C0XPC3|C0XPC3_9CORY Tax_Id=525263 SubName: Full=Possible dihy... 416 e-114 >sp|Q50049|DUS_MYCLE Tax_Id=1769 (dus)RecName: Full=Probable tRNA-dihydrouridine synthase; EC=1.-.-.-;[Mycobacterium leprae] Length = 384 Score = 732 bits (1889), Expect = 0.0 Identities = 362/384 (94%), Positives = 363/384 (94%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA Sbjct: 1 MLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV Sbjct: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLD Sbjct: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDAGRIAEAEG 180 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV Sbjct: 181 AAAVALHARTAAQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK Sbjct: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL Sbjct: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PDSWLTDPDDCTVPIGADIMESGG Sbjct: 361 PDSWLTDPDDCTVPIGADIMESGG 384 >tr|B8ZST6|B8ZST6_MYCLB Tax_Id=561304 SubName: Full=Transcriptional regulator (NifR3/Smm1 family);[Mycobacterium leprae] Length = 384 Score = 732 bits (1889), Expect = 0.0 Identities = 362/384 (94%), Positives = 363/384 (94%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA Sbjct: 1 MLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV Sbjct: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLD Sbjct: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDAGRIAEAEG 180 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV Sbjct: 181 AAAVALHARTAAQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK Sbjct: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL Sbjct: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PDSWLTDPDDCTVPIGADIMESGG Sbjct: 361 PDSWLTDPDDCTVPIGADIMESGG 384 >tr|A0QAV6|A0QAV6_MYCA1 Tax_Id=243243 SubName: Full=Dihydrouridine synthase;[Mycobacterium avium] Length = 377 Score = 605 bits (1559), Expect = e-171 Identities = 300/384 (78%), Positives = 320/384 (83%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE+ VGT+SGLYVCEMVTARA Sbjct: 13 VLAPMAGVTNVAFRTLCRE-------------------LERELVGTVSGLYVCEMVTARA 53 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ T+HMTTFAPDESPRSLQLYTVDPATTY AAKM+A+EGLADHIDMNFGCP+PKV Sbjct: 54 LVERHPATMHMTTFAPDESPRSLQLYTVDPATTYAAAKMIANEGLADHIDMNFGCPVPKV 113 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGG+ALPYKRRLFGQIVAAAVRAT+GT+IPVTVKFRIGID+EHHTHLD Sbjct: 114 TKRGGGSALPYKRRLFGQIVAAAVRATQGTEIPVTVKFRIGIDEEHHTHLDAGRIAEAEG 173 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA LKQQVRTIPVLGNGDIYDASDAL MMA TGCDGV Sbjct: 174 AAAVALHARTAAQRYSGTADWEQIALLKQQVRTIPVLGNGDIYDASDALTMMAATGCDGV 233 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG P P PPTLG+VA+IVRRHG+LL AHFGEDKGMRDIRK Sbjct: 234 VIGRGCLGRPWLFAELSAAFTGSPPPTPPTLGQVADIVRRHGRLLAAHFGEDKGMRDIRK 293 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGSELR ALA+VKTLDELD LL+RLDG+VPFPD A GPRGRQGSPA V L Sbjct: 294 HIAWYLHGFPAGSELRRALAIVKTLDELDRLLDRLDGSVPFPDEATGPRGRQGSPARVVL 353 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDDCTVP GAD+M SGG Sbjct: 354 PEGWLDDPDDCTVPAGADVMHSGG 377 >tr|Q743C8|Q743C8_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 377 Score = 602 bits (1552), Expect = e-170 Identities = 301/384 (78%), Positives = 318/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE+ VGT+SGLYV EMVTARA Sbjct: 13 VLAPMAGVTNVAFRTLCRE-------------------LERELVGTVSGLYVYEMVTARA 53 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ T+HM TFAPDESPRSLQLYTVDPATTY AAKM+ADEGLADHIDMNFGCP+PKV Sbjct: 54 LVERHPATMHMITFAPDESPRSLQLYTVDPATTYAAAKMIADEGLADHIDMNFGCPVPKV 113 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGG+ALPYKRRLFGQIVAAAVRAT+GT+IPVTVKFRIGIDDEHHTHLD Sbjct: 114 TKRGGGSALPYKRRLFGQIVAAAVRATQGTEIPVTVKFRIGIDDEHHTHLDAGRIAEAEG 173 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA LKQQVRTIPVLGNGDIYDASDAL MMA TGCDGV Sbjct: 174 AAAVALHARTAAQRYSGTADWEQIALLKQQVRTIPVLGNGDIYDASDALTMMAATGCDGV 233 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG P P PPTLG+VA+IVRRHG+LL AHFGEDKGMRDIRK Sbjct: 234 VIGRGCLGRPWLFAELSAAFTGSPPPTPPTLGQVADIVRRHGRLLAAHFGEDKGMRDIRK 293 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGSELR ALA+VKTLDELD LL+RLDG+VPFPD A GPRGRQGSPA V L Sbjct: 294 HIAWYLHGFPAGSELRRALAMVKTLDELDRLLDRLDGSVPFPDEATGPRGRQGSPARVVL 353 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDDCTVP GADIM SGG Sbjct: 354 PEGWLDDPDDCTVPAGADIMHSGG 377 >sp|O53835|DUS_MYCTU Tax_Id=1773 (dus)RecName: Full=Probable tRNA-dihydrouridine synthase; EC=1.-.-.-;[Mycobacterium tuberculosis] Length = 389 Score = 595 bits (1535), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKT DELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|C6DVC8|C6DVC8_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 389 Score = 595 bits (1535), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKT DELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A5U0L2|A5U0L2_MYCTA Tax_Id=419947 SubName: Full=NifR3/SMM1 family protein;[Mycobacterium tuberculosis] Length = 389 Score = 595 bits (1535), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKT DELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A5WKJ2|A5WKJ2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 389 Score = 595 bits (1535), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKT DELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A2VGC3|A2VGC3_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 389 Score = 595 bits (1535), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKT DELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|Q7U170|Q7U170_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 389 Score = 593 bits (1530), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RG GAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGCGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKTLDELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|C1ALF8|C1ALF8_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 389 Score = 593 bits (1530), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RG GAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGCGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKTLDELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A1KGV6|A1KGV6_MYCBP Tax_Id=410289 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium bovis] Length = 389 Score = 593 bits (1530), Expect = e-168 Identities = 296/384 (77%), Positives = 315/384 (82%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RG GAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGCGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS LR ALA+VKTLDELDCLL+RLDG VPFPD+A G RGRQGSPA VAL Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVAL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WLTDPDDC VP GAD M SGG Sbjct: 366 PDGWLTDPDDCRVPEGADAMGSGG 389 >tr|B2HH06|B2HH06_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulator;[Mycobacterium marinum] Length = 377 Score = 590 bits (1521), Expect = e-166 Identities = 293/384 (76%), Positives = 314/384 (81%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LEQ++VGT+SGLYVCEMVTARA Sbjct: 13 VLAPMAGVTNVAFRTLCRE-------------------LEQAKVGTVSGLYVCEMVTARA 53 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMTTFAPDESPRSLQLYTVDP TTY AA+M+A+EGLADHIDMNFGCP+PKV Sbjct: 54 LVERHPVTMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKV 113 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALP+KRRLFGQIVAAAVR EGT IPVTVKFRIGIDD HHTHLD Sbjct: 114 TKRGGGAALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 173 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA LKQ VRT+PVLGNGDIYDASDALAMMA TGCDGV Sbjct: 174 AAAVALHARTAAQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGV 233 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG P P PPTLGEV +I+RRHG+LL AHFGEDKGMRDIRK Sbjct: 234 VIGRGCLGRPWLFAELSAAFTGNPGPTPPTLGEVTDIIRRHGELLAAHFGEDKGMRDIRK 293 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWYLHGFPAGS+LR ALALVKTLDELD LL RLD V FP+AA GPRGRQGSP+ VAL Sbjct: 294 HVAWYLHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVAL 353 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDDC VP GAD+M SGG Sbjct: 354 PEGWLDDPDDCQVPDGADVMHSGG 377 >tr|A0PLD2|A0PLD2_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulator;[Mycobacterium ulcerans] Length = 377 Score = 585 bits (1508), Expect = e-165 Identities = 289/383 (75%), Positives = 313/383 (81%), Gaps = 19/383 (4%) Query: 2 LAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARAL 61 LAPMAGVTNV FRTLCRE LE+++VGT+SGLYVCEMVTARAL Sbjct: 14 LAPMAGVTNVAFRTLCRE-------------------LEEAKVGTVSGLYVCEMVTARAL 54 Query: 62 VERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKVT 121 VER+ VT+HMTTFAPDESPRSLQLYTVDP TTY AA+M+A+EGLADHIDMNFGCP+PKVT Sbjct: 55 VERHPVTMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVT 114 Query: 122 RRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXXX 181 +RGGGAALP+KRRLFGQIVAAAVR EGT IPVTVKFRIGIDD HHTHLD Sbjct: 115 KRGGGAALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGA 174 Query: 182 XXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGVV 241 QRYSGTADW QIA LKQ VRT+PVLGNGDIYDASDALAM+A TGCDGVV Sbjct: 175 AAVALHARTAAQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMIAATGCDGVV 234 Query: 242 IGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRKH 301 IGRGCLGRPWLFAELSAAFTG P P PPTLGEV +I+RRHG+LL AHFGEDKG+RDIRKH Sbjct: 235 IGRGCLGRPWLFAELSAAFTGNPGPTPPTLGEVTDIIRRHGELLAAHFGEDKGVRDIRKH 294 Query: 302 IAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVALP 361 +AWYLHGFPAGS+LR ALALVKTLDELD LL RLD V FP+AA GPRGRQGSP+ VALP Sbjct: 295 VAWYLHGFPAGSDLRRALALVKTLDELDSLLTRLDPGVAFPEAANGPRGRQGSPSRVALP 354 Query: 362 DSWLTDPDDCTVPIGADIMESGG 384 + WL DPDDC VP GAD+M SGG Sbjct: 355 EGWLDDPDDCRVPDGADVMHSGG 377 >tr|A4T7F4|A4T7F4_MYCGI Tax_Id=350054 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium gilvum] Length = 455 Score = 565 bits (1457), Expect = e-159 Identities = 281/384 (73%), Positives = 305/384 (79%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE S+ GT+SGLYVCEMVTARA Sbjct: 91 VLAPMAGVTNVAFRTLCRE-------------------LELSRAGTVSGLYVCEMVTARA 131 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMTTFAP+ESPRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 132 LVERHPVTMHMTTFAPEESPRSLQLYTVDPVNTYAAAKMIVDENLADHIDMNFGCPVPKV 191 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGGAALPYKRRLFGQIV+AAVRATEGT IPVTVKFRIGIDDEHHTHLD Sbjct: 192 TRRGGGAALPYKRRLFGQIVSAAVRATEGTDIPVTVKFRIGIDDEHHTHLDAGRIAAEEG 251 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSG+ADW QIA LK V +PVLGNGDI+DA DALAMMA TGCDGV Sbjct: 252 AAAVALHARTAAQRYSGSADWDQIAALKAHVTNVPVLGNGDIFDARDALAMMAATGCDGV 311 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PPTLGEVA+I+RRHG+LL AHFGEDKGMRDIRK Sbjct: 312 VIGRGCLGRPWLFAELSAAFTGATPATPPTLGEVAQIIRRHGELLAAHFGEDKGMRDIRK 371 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWY+HGFPAG++LR ++ALVKT+ ELD LL +LD VPFP AA GPRGRQGS A V L Sbjct: 372 HVAWYMHGFPAGADLRRSMALVKTISELDDLLEQLDPDVPFPAAANGPRGRQGSAASVTL 431 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDDCTVP GAD+M SGG Sbjct: 432 PEGWLDDPDDCTVPAGADVMHSGG 455 >tr|Q1B3B8|Q1B3B8_MYCSS Tax_Id=164756 SubName: Full=Dihydrouridine synthase TIM-barrel protein nifR3;[Mycobacterium sp.] Length = 370 Score = 565 bits (1456), Expect = e-159 Identities = 284/384 (73%), Positives = 303/384 (78%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE ++ GT+SGLYVCEMVTARA Sbjct: 6 VLAPMAGVTNVAFRTLCRE-------------------LEVARAGTVSGLYVCEMVTARA 46 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMT FA DESPRSLQLYTVDPATTY AAKM+ADE +ADHIDMNFGCP+PKV Sbjct: 47 LVERHPVTMHMTAFASDESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKV 106 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALPYKR+LFGQIV AAV ATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 107 TKRGGGAALPYKRKLFGQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEG 166 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA LK V +PVLGNGDI+DA DALAMMA TGCDGV Sbjct: 167 AAAVALHARTAAQRYSGTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGV 226 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSA FTGRP P PPTLGEVA+I+RRHG+LL HFGEDK MRDIRK Sbjct: 227 VIGRGCLGRPWLFAELSAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRK 286 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS+LR ALALVKT EL LL RLD VPFP AA GPRGRQGS A V+L Sbjct: 287 HIAWYLHGFPAGSDLRRALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSL 346 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WLTDPDDCTVP GAD+M SGG Sbjct: 347 PEGWLTDPDDCTVPAGADVMHSGG 370 >tr|A1ULT2|A1ULT2_MYCSK Tax_Id=189918 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium sp.] Length = 370 Score = 565 bits (1456), Expect = e-159 Identities = 284/384 (73%), Positives = 303/384 (78%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE ++ GT+SGLYVCEMVTARA Sbjct: 6 VLAPMAGVTNVAFRTLCRE-------------------LEVARAGTVSGLYVCEMVTARA 46 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMT FA DESPRSLQLYTVDPATTY AAKM+ADE +ADHIDMNFGCP+PKV Sbjct: 47 LVERHPVTMHMTAFASDESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKV 106 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALPYKR+LFGQIV AAV ATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 107 TKRGGGAALPYKRKLFGQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEG 166 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA LK V +PVLGNGDI+DA DALAMMA TGCDGV Sbjct: 167 AAAVALHARTAAQRYSGTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGV 226 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSA FTGRP P PPTLGEVA+I+RRHG+LL HFGEDK MRDIRK Sbjct: 227 VIGRGCLGRPWLFAELSAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRK 286 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS+LR ALALVKT EL LL RLD VPFP AA GPRGRQGS A V+L Sbjct: 287 HIAWYLHGFPAGSDLRRALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSL 346 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WLTDPDDCTVP GAD+M SGG Sbjct: 347 PEGWLTDPDDCTVPAGADVMHSGG 370 >tr|A0R4B5|A0R4B5_MYCS2 Tax_Id=246196 SubName: Full=tRNA-dihydrouridine synthase, putative; EC=1.-.-.-;[Mycobacterium smegmatis] Length = 389 Score = 563 bits (1450), Expect = e-158 Identities = 282/384 (73%), Positives = 304/384 (79%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE ++ GT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRTLCRE-------------------LEIARAGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMTTFAP+ESPRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 66 LVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALPYKRRLFGQIVAAAVRATEGT IPVTVKFRIGIDDEHHTHLD Sbjct: 126 TKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDAGRIAAEEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA LK V IPVLGNGDI++A DALAMMA TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAF RP P PPTLGEVA+IVRRHG+LL HFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWYLHGFPAG++LR ALALVKT ELD LL++LD PFP AA GPRGRQGS + V L Sbjct: 306 HVAWYLHGFPAGADLRRALALVKTRRELDELLDQLDRDAPFPPAATGPRGRQGSASSVHL 365 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDDC VP+GAD+M SGG Sbjct: 366 PEGWLDDPDDCAVPVGADVMHSGG 389 >tr|A3Q683|A3Q683_MYCSJ Tax_Id=164757 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium sp.] Length = 370 Score = 562 bits (1449), Expect = e-158 Identities = 283/384 (73%), Positives = 302/384 (78%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE ++ GT+SGLYVCEMVTARA Sbjct: 6 VLAPMAGVTNVAFRTLCRE-------------------LEVARAGTVSGLYVCEMVTARA 46 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMT FA DESPRSLQLYTVDPATTY AAKM+ADE +ADHIDMNFGCP+PKV Sbjct: 47 LVERHPVTMHMTAFASDESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKV 106 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALPYKR+LFGQIV AAV ATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 107 TKRGGGAALPYKRKLFGQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEG 166 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA LK V +PVLGNGDI+DA DALAMMA TGCDGV Sbjct: 167 AAAVALHARTAAQRYSGTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGV 226 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSA FTGRP P PPTLGEVA+I+RRHG+LL HFGEDK MRDIRK Sbjct: 227 VIGRGCLGRPWLFAELSAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRK 286 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAGS+LR ALALVKT EL LL RLD VPFP AA GPRGRQGS A V+L Sbjct: 287 HIAWYLHGFPAGSDLRRALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSL 346 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WLTDPDDCTVP GA +M SGG Sbjct: 347 PEGWLTDPDDCTVPAGAHVMHSGG 370 >tr|A1TFA7|A1TFA7_MYCVP Tax_Id=350058 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium vanbaalenii] Length = 377 Score = 561 bits (1446), Expect = e-158 Identities = 280/384 (72%), Positives = 303/384 (78%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE S+ GT+SGLYVCEMVTARA Sbjct: 13 VLAPMAGVTNVAFRTLCRE-------------------LELSRAGTVSGLYVCEMVTARA 53 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMTTFAP+ESPRSLQLYTVDPA TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 54 LVERHPVTMHMTTFAPEESPRSLQLYTVDPANTYAAAKMIVDENLADHIDMNFGCPVPKV 113 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGGAALPYKRRLFGQI+ AAV ATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 114 TRRGGGAALPYKRRLFGQIIRAAVAATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAADEG 173 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSG+ADW QIA LK V IPVLGNGDI+DA DALAMMA TGCDGV Sbjct: 174 AAAVALHARTAAQRYSGSADWEQIAALKAHVTNIPVLGNGDIFDARDALAMMAATGCDGV 233 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAF G PPTLGEVA+I+RRHG+LL AHFGEDKGMRDIRK Sbjct: 234 VIGRGCLGRPWLFAELSAAFNGTAPATPPTLGEVAQIIRRHGELLAAHFGEDKGMRDIRK 293 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWY+HGFPAG++LR +LALVKT+ ELD LL++LD VPFP AA GPRGRQGS A V L Sbjct: 294 HVAWYMHGFPAGADLRRSLALVKTISELDDLLDQLDPDVPFPAAANGPRGRQGSAASVTL 353 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDDCTVP GAD+M SGG Sbjct: 354 PEGWLDDPDDCTVPAGADVMHSGG 377 >tr|B1MI27|B1MI27_MYCA9 Tax_Id=561007 SubName: Full=Probable tRNA-dihydrouridine synthase;[Mycobacterium abscessus] Length = 391 Score = 548 bits (1411), Expect = e-154 Identities = 271/384 (70%), Positives = 298/384 (77%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE + GT+SGLYVCEMVTARA Sbjct: 27 VLAPMAGVTNVAFRTLCRE-------------------LELATTGTVSGLYVCEMVTARA 67 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L ER+ VT+HMTTF+P+ESPRSLQLY+VDP TTY AAKMV DEGLADHIDMNFGCP+PKV Sbjct: 68 LAERHPVTLHMTTFSPEESPRSLQLYSVDPETTYRAAKMVVDEGLADHIDMNFGCPVPKV 127 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR GGGAALPYKRRLFGQIVAAAVRAT GT IPVTVKFR+GIDD+HHTHLD Sbjct: 128 TRNGGGAALPYKRRLFGQIVAAAVRATAGTDIPVTVKFRVGIDDDHHTHLDAGAIAESEG 187 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW+QIA LK V TIPVLGNGDI+DA+DA+AMM TGCDGV Sbjct: 188 AAAVALHARTASQRYSGTADWSQIAALKNHVTTIPVLGNGDIFDAADAVAMMEQTGCDGV 247 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSA F G+ PAPP LG+V I+RRH +LLV HFGEDK +RD+RK Sbjct: 248 VIGRGCLGRPWLFAELSAVFNGQTIPAPPNLGQVTVIMRRHAELLVDHFGEDKALRDMRK 307 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 HIAWYLHGFPAG ++R ALALV T ELD LL +LD + PFP+ GPRGRQGSPA V+L Sbjct: 308 HIAWYLHGFPAGGDIRRALALVSTRAELDTLLEQLDQSAPFPEGGNGPRGRQGSPAKVSL 367 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WL DPDDCTVP AD+M SGG Sbjct: 368 PDGWLNDPDDCTVPSAADVMHSGG 391 >tr|Q0S733|Q0S733_RHOSR Tax_Id=101510 SubName: Full=Probable tRNA-dihydrouridine synthase;[Rhodococcus sp.] Length = 380 Score = 524 bits (1349), Expect = e-147 Identities = 257/384 (66%), Positives = 289/384 (75%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAG+TNV FRTLCRE LE + G+ SGLYVCEMVTARA Sbjct: 16 VLAPMAGITNVAFRTLCRE-------------------LETERAGSTSGLYVCEMVTARA 56 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER T+HMTTF P E+PRSLQLYTVDP TTY AAKM+ DE +ADHIDMNFGCP+PKV Sbjct: 57 LVERQPATLHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKV 116 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGGAALPYKR LFG+IVAAAV+ATEGT +PVTVKFR+GID EHHTHLD Sbjct: 117 TRKGGGAALPYKRTLFGRIVAAAVKATEGTDVPVTVKFRVGIDAEHHTHLDAGRIAAGEG 176 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW +IA+LK+ V +PVLGNGDI+ A DA MM TGCDGV Sbjct: 177 AAAVALHARTASQRYSGTADWNEIARLKEHVTDVPVLGNGDIFAAEDAARMMEQTGCDGV 236 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 V+GRGCLGRPWLFAELSAA G+P P PP LGEVA I+RRH +LL H GEDKG+R++RK Sbjct: 237 VVGRGCLGRPWLFAELSAALNGKPQPTPPNLGEVATIIRRHAELLADHHGEDKGLRELRK 296 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H++WYL GFPAGSELR A+ALV TL ELD LL +LD +PFP A GPRGRQGSP VAL Sbjct: 297 HVSWYLRGFPAGSELRVAMALVSTLTELDDLLVQLDPTIPFPKDAEGPRGRQGSPGTVAL 356 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDDC VP GAD+M SGG Sbjct: 357 PEGWLDDPDDCLVPAGADLMHSGG 380 >tr|C1ATD3|C1ATD3_RHOOB Tax_Id=632772 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus opacus] Length = 380 Score = 521 bits (1342), Expect = e-146 Identities = 255/384 (66%), Positives = 289/384 (75%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAG+TNV FRTLCRE LE + G+ SGLYVCEMVTARA Sbjct: 16 VLAPMAGITNVAFRTLCRE-------------------LETERAGSTSGLYVCEMVTARA 56 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER T+HMTTF P E+PRSLQLYTVDP TTY AAKM+ DE +ADHIDMNFGCP+PKV Sbjct: 57 LVERQPATLHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKV 116 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGGAALPYKR LFG+IVAAAV+ATEGT +PVTVKFR+GID +HHTHLD Sbjct: 117 TRKGGGAALPYKRTLFGRIVAAAVKATEGTDVPVTVKFRVGIDADHHTHLDAGRIAAGEG 176 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW +IA+LK+ V +PVLGNGDI+ A DA MM TGCDGV Sbjct: 177 AAAVALHARTASQRYSGTADWNEIARLKEHVTDVPVLGNGDIFAAEDAARMMEQTGCDGV 236 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 V+GRGCLGRPWLFAELSAA G+P P PP LGEVA I+RRH +LL H GEDKG+R++RK Sbjct: 237 VVGRGCLGRPWLFAELSAALNGKPQPTPPNLGEVATIIRRHAELLADHHGEDKGLRELRK 296 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H++WYL GFPAGSELR A+ALV TL ELD LL +LD +PFP A GPRGRQGSP VAL Sbjct: 297 HVSWYLRGFPAGSELRVAMALVSTLTELDDLLVQLDPTIPFPKDAEGPRGRQGSPGTVAL 356 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DP+DC VP GAD+M SGG Sbjct: 357 PEGWLDDPEDCLVPAGADLMHSGG 380 >tr|C0ZP03|C0ZP03_RHOE4 Tax_Id=234621 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus erythropolis] Length = 380 Score = 511 bits (1315), Expect = e-143 Identities = 252/384 (65%), Positives = 287/384 (74%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE + G+ SGLYVCEMVTARA Sbjct: 16 VLAPMAGVTNVAFRTLCRE-------------------LELERAGSTSGLYVCEMVTARA 56 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER T+HMTTF P E+PRSLQLYTVDP TTY AAKM+ DE +ADHIDMNFGCP+PKV Sbjct: 57 LVERQPATMHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKV 116 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGG+ALPYKRRLFGQIVAAAVRATEGT IPVTVK R+GID EHHTHLD Sbjct: 117 TRKGGGSALPYKRRLFGQIVAAAVRATEGTDIPVTVKMRVGIDPEHHTHLDAGRIAAAEG 176 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW +I +LK+ V +P+LGNGDI+DASDA MM TGCDGV Sbjct: 177 AAAVALHARTASQRYSGTADWNEITRLKEHVTDVPILGNGDIFDASDAARMMNETGCDGV 236 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 V+GRGCLGRPWLFAELSAA G+ PPTLGEV +I+ RH +LL AH GE KG+R++RK Sbjct: 237 VVGRGCLGRPWLFAELSAALNGQQIATPPTLGEVTKIIARHAQLLAAHHGEMKGLRELRK 296 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H++WY+ GFP GS+LR ++ALV TL ELD LL +LD VPFP A GPRGRQGSP VAL Sbjct: 297 HVSWYMRGFPVGSDLRVSMALVSTLSELDDLLGQLDHDVPFPKDAEGPRGRQGSPGQVAL 356 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DP+D VP+GAD+M SGG Sbjct: 357 PEGWLDDPEDDLVPVGADMMHSGG 380 >tr|C3JEH0|C3JEH0_RHOER Tax_Id=596309 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus erythropolis SK121] Length = 380 Score = 511 bits (1315), Expect = e-143 Identities = 252/384 (65%), Positives = 287/384 (74%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE + G+ SGLYVCEMVTARA Sbjct: 16 VLAPMAGVTNVAFRTLCRE-------------------LELERAGSTSGLYVCEMVTARA 56 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER T+HMTTF P E+PRSLQLYTVDP TTY AAKM+ DE +ADHIDMNFGCP+PKV Sbjct: 57 LVERQPATMHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKV 116 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGG+ALPYKRRLFGQIVAAAVRATEGT IPVTVK R+GID EHHTHLD Sbjct: 117 TRKGGGSALPYKRRLFGQIVAAAVRATEGTDIPVTVKMRVGIDPEHHTHLDAGRIAAAEG 176 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW +I +LK+ V +P+LGNGDI+DASDA MM TGCDGV Sbjct: 177 AAAVALHARTASQRYSGTADWNEITRLKEHVTDVPILGNGDIFDASDAARMMNETGCDGV 236 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 V+GRGCLGRPWLFAELSAA G+ PPTLGEV +I+ RH +LL AH GE KG+R++RK Sbjct: 237 VVGRGCLGRPWLFAELSAALNGQQIATPPTLGEVTKIIARHAQLLAAHHGEMKGLRELRK 296 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H++WY+ GFP GS+LR ++ALV TL ELD LL +LD VPFP A GPRGRQGSP VAL Sbjct: 297 HVSWYMRGFPVGSDLRVSMALVSTLSELDDLLGQLDHDVPFPKDAEGPRGRQGSPGQVAL 356 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DP+D VP+GAD+M SGG Sbjct: 357 PEGWLDDPEDDLVPVGADMMHSGG 380 >tr|D0L3U2|D0L3U2_9ACTO Tax_Id=526226 SubName: Full=TIM-barrel protein, nifR3 family;[Gordonia bronchialis DSM 43247] Length = 394 Score = 503 bits (1296), Expect = e-140 Identities = 256/384 (66%), Positives = 288/384 (75%), Gaps = 19/384 (4%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE LE ++ GT+SGLYVCEMVTARA Sbjct: 30 VLAPMAGVTNVAFRTLCRE-------------------LEIARTGTVSGLYVCEMVTARA 70 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMTTFAP+ESPRS+QLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 71 LVERHPVTMHMTTFAPEESPRSMQLYTVDPEYTYAAAKMIVDEDLADHIDMNFGCPVPKV 130 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGG+A+PYKR LF +IVAAAVRATEGT IPVTVKFRIGIDDEH THLD Sbjct: 131 TRKGGGSAIPYKRTLFRKIVAAAVRATEGTDIPVTVKFRIGIDDEHRTHLDAGRIAAEEG 190 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSG ADW +IA+LK V +PVLGNGDI++ DA+ MM TGCDGV Sbjct: 191 AKAVALHARTASQRYSGQADWDEIARLKDHVTDVPVLGNGDIFEPVDAVEMMRRTGCDGV 250 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAEL+A G AP PPTLGEVA+I+ RH +LLVAH GE KG R+IRK Sbjct: 251 VIGRGCLGRPWLFAELAAEMNGVEAPTPPTLGEVADIIVRHCELLVAHHGEMKGCREIRK 310 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWYL GFPAGSELR +ALV+T+D+L L+ L VPFP GPRGRQGSPA VAL Sbjct: 311 HVAWYLRGFPAGSELRRQMALVETVDQLRELVATLPADVPFPTDGHGPRGRQGSPAKVAL 370 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 PD WL DPD+ VP GA+IM SGG Sbjct: 371 PDGWLDDPDEDVVPEGAEIMHSGG 394 >tr|A4KFD4|A4KFD4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 339 Score = 498 bits (1283), Expect = e-139 Identities = 249/326 (76%), Positives = 266/326 (81%), Gaps = 19/326 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCR+ LEQS+VGT+SGLYVCEMVTARA Sbjct: 25 VLAPMAGVTNVAFRALCRQ-------------------LEQSKVGTVSGLYVCEMVTARA 65 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 L+ER+ VT+HMTTF+ DESPRSLQLYTVDP TTY AA+M+A EGLADHIDMNFGCP+PKV Sbjct: 66 LIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKV 125 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 T+RGGGAALP+KRRLFGQIVAAAVRATEGT IPVTVKFRIGIDD HHTHLD Sbjct: 126 TKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEG 185 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW QIA+LKQ VRTIPVLGNGDIYDA DALAMM+ TGCDGV Sbjct: 186 AAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGV 245 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLFAELSAAFTG PAP PPTLGEVA+I+RRHG LL AHFGEDKGMRDIRK Sbjct: 246 VIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRK 305 Query: 301 HIAWYLHGFPAGSELRNALALVKTLD 326 HIAWYLHGFPAGS LR ALA+VKT D Sbjct: 306 HIAWYLHGFPAGSALRRALAMVKTFD 331 >tr|Q4JXC2|Q4JXC2_CORJK Tax_Id=306537 SubName: Full=Putative uncharacterized protein;[Corynebacterium jeikeium] Length = 389 Score = 479 bits (1233), Expect = e-133 Identities = 245/386 (63%), Positives = 279/386 (72%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR+LCRE E+ ++G+++GLYVCEMVTARA Sbjct: 23 VLAPMAGVTNVAFRSLCRE-------------------QERERMGSVAGLYVCEMVTARA 63 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAPDE PRSLQLYT DP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 64 LVERNPKTLHMTTFAPDEDPRSLQLYTTDPEYTYKAAKMIVDENLADHIDMNFGCPVPKV 123 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKR+LFG IVAAAV+ATEGT IPVTVK R+GIDDEHHTHLD Sbjct: 124 TRRGGGSALPYKRKLFGNIVAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEG 183 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQV--RTIPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG ADW +IA+LK+ + IPVLGNGDI+ A+DA AMM TGCD Sbjct: 184 AAAVALHGRTAAQRYSGHADWNEIARLKEHLAHTGIPVLGNGDIFKATDARAMMEQTGCD 243 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSA G P P+ PTLGEVA I+ RH +LL AH GE K RD+ Sbjct: 244 GVVVGRGCLGRPWLFAELSAELRGLPIPSEPTLGEVARIILRHAELLAAHDGEQKACRDL 303 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFPAG ELR +L+ V +LDEL L + + + A G RGRQGSPA V Sbjct: 304 RKHMTWYLRGFPAGGELRRSLSRVSSLDELKSALAEVWDSPALAEDADGARGRQGSPAKV 363 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALP+ WL DP+D TVP GADI SGG Sbjct: 364 ALPEGWLDDPEDETVPDGADIENSGG 389 >tr|C8RS32|C8RS32_CORJE Tax_Id=525262 SubName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-;[Corynebacterium jeikeium ATCC 43734] Length = 374 Score = 479 bits (1233), Expect = e-133 Identities = 245/386 (63%), Positives = 279/386 (72%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR+LCRE E+ ++G+++GLYVCEMVTARA Sbjct: 8 VLAPMAGVTNVAFRSLCRE-------------------QERERMGSVAGLYVCEMVTARA 48 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAPDE PRSLQLYT DP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 49 LVERNPKTLHMTTFAPDEDPRSLQLYTTDPEYTYKAAKMIVDENLADHIDMNFGCPVPKV 108 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKR+LFG IVAAAV+ATEGT IPVTVK R+GIDDEHHTHLD Sbjct: 109 TRRGGGSALPYKRKLFGNIVAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEG 168 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQV--RTIPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG ADW +IA+LK+ + IPVLGNGDI+ A+DA AMM TGCD Sbjct: 169 AAAVALHGRTAAQRYSGHADWNEIARLKEHLAHTGIPVLGNGDIFKATDARAMMEQTGCD 228 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSA G P P+ PTLGEVA I+ RH +LL AH GE K RD+ Sbjct: 229 GVVVGRGCLGRPWLFAELSAELRGLPIPSEPTLGEVARIILRHAELLAAHDGEQKACRDL 288 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFPAG ELR +L+ V +LDEL L + + + A G RGRQGSPA V Sbjct: 289 RKHMTWYLRGFPAGGELRRSLSRVSSLDELKSALAEVWDSPALAEDADGARGRQGSPAKV 348 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALP+ WL DP+D TVP GADI SGG Sbjct: 349 ALPEGWLDDPEDETVPDGADIENSGG 374 >tr|C2AKX2|C2AKX2_TSUPA Tax_Id=521096 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Tsukamurella paurometabola DSM 20162] Length = 396 Score = 479 bits (1233), Expect = e-133 Identities = 248/395 (62%), Positives = 280/395 (70%), Gaps = 30/395 (7%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR+LCRE LE+++ GT++GLYVCEMVTARA Sbjct: 21 VLAPMAGVTNVAFRSLCRE-------------------LERARTGTVAGLYVCEMVTARA 61 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ VT+HMTTFAPDE PRSLQLYTVD TY AA+M+A+EGLADH+DMNFGCP+PK+ Sbjct: 62 LVERHPVTMHMTTFAPDEDPRSLQLYTVDAHYTYEAARMIAEEGLADHLDMNFGCPVPKI 121 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATE----GTKIPVTVKFRIGIDDEHHTHLDXXXXX 176 TRRGGG+ALPYKR LF IV AAVR E G +IPVTVKFRIGIDDEHHTHLD Sbjct: 122 TRRGGGSALPYKRNLFASIVDAAVRGIEDGGQGGRIPVTVKFRIGIDDEHHTHLDAGRIA 181 Query: 177 XXXXXXXXXXXXXXXXQRYSGTADWAQIAQLKQQVR-----TIPVLGNGDIYDASDALAM 231 QRYSG ADW +IA+LK+ V +PVLGNGDI+ A DA+ M Sbjct: 182 AEQGAVAVALHARTAAQRYSGQADWDEIARLKEHVHHHFGDAVPVLGNGDIFAAEDAVTM 241 Query: 232 MAVTGCDGVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGE 291 M TGCDGVV+GRGCLGRPWLF+ELSAA G P P PP LGEV EI+ RHG+LL AH GE Sbjct: 242 MDRTGCDGVVVGRGCLGRPWLFSELSAALNGTPMPTPPNLGEVTEIMYRHGELLAAHHGE 301 Query: 292 DKGMRDIRKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGR 351 DKGMR+IRKH+AWYL GFPAG ELR LA VKTL +L LL+ L VPFP A GPRGR Sbjct: 302 DKGMREIRKHVAWYLRGFPAGGELRTRLATVKTLTDLRALLDTLPRDVPFPKDAEGPRGR 361 Query: 352 QGSPAWVALPDSWLTDP--DDCTVPIGADIMESGG 384 QG+P V LPD WL DP D GA+ SGG Sbjct: 362 QGTPGKVVLPDGWLDDPWEADAAAMPGAETETSGG 396 >tr|B1VII2|B1VII2_CORU7 Tax_Id=504474 SubName: Full=Putative uncharacterized protein;[Corynebacterium urealyticum] Length = 442 Score = 475 bits (1222), Expect = e-132 Identities = 242/385 (62%), Positives = 278/385 (72%), Gaps = 20/385 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE E+ ++G+++GLYVCEMVTARA Sbjct: 77 VLAPMAGVTNVAFRTLCRE-------------------QERERMGSVAGLYVCEMVTARA 117 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAPDE PRSLQLYT DP TY AAKM+ DE +ADHIDMNFGCPMPKV Sbjct: 118 LVERNPKTLHMTTFAPDEDPRSLQLYTTDPKYTYEAAKMIVDENMADHIDMNFGCPMPKV 177 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGGAALPYKRRLFG IVAAAV+ATEGT IPVTVK RIGIDDEH THLD Sbjct: 178 TRRGGGAALPYKRRLFGNIVAAAVKATEGTDIPVTVKMRIGIDDEHRTHLDAGRIAADEG 237 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQV-RTIPVLGNGDIYDASDALAMMAVTGCDG 239 QRY+G ADW++IA+L + + +PVLGNGDI+ A+DA AMM TGCDG Sbjct: 238 AAAVALHGRTAAQRYAGDADWSEIARLVEHMDGRVPVLGNGDIFKATDARAMMDQTGCDG 297 Query: 240 VVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIR 299 VV+GRGCLGRPWLFAELSA G P PA P LGEVA I+ RH +LL H GED+ RD+R Sbjct: 298 VVVGRGCLGRPWLFAELSAELRGLPVPAEPPLGEVARIIMRHAELLAEHDGEDRACRDLR 357 Query: 300 KHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVA 359 KH+ WY+ GFPAG ELR +L+ V +L EL +L+ + + + A G RGRQGSPA V Sbjct: 358 KHMTWYMRGFPAGGELRRSLSKVSSLAELREVLDPIWDSEALANDADGARGRQGSPAKVQ 417 Query: 360 LPDSWLTDPDDCTVPIGADIMESGG 384 LPD WL DP+D TVP+GADI SGG Sbjct: 418 LPDGWLDDPEDETVPVGADIENSGG 442 >tr|Q8NMK3|Q8NMK3_CORGL Tax_Id=1718 SubName: Full=Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family; SubName: Full=Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family;[Corynebacterium glutamicum] Length = 381 Score = 474 bits (1220), Expect = e-132 Identities = 244/386 (63%), Positives = 275/386 (71%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE E + GTISGLYVCEMVTARA Sbjct: 15 VLAPMAGVTNVAFRTLCRE-------------------QEMQRTGTISGLYVCEMVTARA 55 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAPDE+PRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 56 LVERNEKTMHMTTFAPDENPRSLQLYTVDPKYTYEAAKMIVDENLADHIDMNFGCPVPKV 115 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+A+PYKRRLF IV+AAV+ATEGT IPVTVKFR+GIDDEHHTHLD Sbjct: 116 TRRGGGSAIPYKRRLFENIVSAAVKATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAG 175 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG ADW +IA+LK+ + IPVLGNGDI+ ASDA MM TGCD Sbjct: 176 AKSVALHARTAAQRYSGEADWNEIARLKEHLADTGIPVLGNGDIFAASDATRMMEQTGCD 235 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSAA G P PT GEV +I+ RH +LL+ H GE KG+RD+ Sbjct: 236 GVVVGRGCLGRPWLFAELSAAVRGEEIPEEPTFGEVTQIILRHAELLMQHDGETKGLRDL 295 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFP G E R+ LA V T EL+ LL + + A G RGRQG+PA V Sbjct: 296 RKHMGWYLRGFPVGGEFRSNLAKVSTYVELEDLLAPWADSTAKAEDAEGARGRQGAPAKV 355 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALPD WL DP+D TVP GA++ SGG Sbjct: 356 ALPDGWLDDPEDATVPKGAEMENSGG 381 >tr|C2CTC8|C2CTC8_CORST Tax_Id=525268 SubName: Full=Possible tRNA-dihydrouridine synthase;[Corynebacterium striatum ATCC 6940] Length = 381 Score = 474 bits (1220), Expect = e-132 Identities = 243/386 (62%), Positives = 275/386 (71%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FRTLCRE E + GT+SGLYVCEMVTARA Sbjct: 15 VLAPMAGVTNVAFRTLCRE-------------------QEIEKTGTVSGLYVCEMVTARA 55 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTF P+E+PRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 56 LVERNEKTMHMTTFGPEENPRSLQLYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKV 115 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKRRLFG I+AAAV+ATEGT IPVTVK R+GIDDEHHTHLD Sbjct: 116 TRRGGGSALPYKRRLFGNIIAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEG 175 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG ADW +IA+LK+ + IPVLGNGDI+ A+DA AMM TGCD Sbjct: 176 AAAVALHGRTAAQRYSGHADWNEIARLKEHLADSGIPVLGNGDIFKATDARAMMEQTGCD 235 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSA G P PA PTLGEV + + RH +LL H GE + RDI Sbjct: 236 GVVVGRGCLGRPWLFAELSAELRGEPIPAEPTLGEVTKTMIRHAELLAQHDGERQASRDI 295 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFP G E+R+ LA V+++D L LL + D A G RGRQGSPA V Sbjct: 296 RKHVGWYLRGFPVGGEVRSGLARVESVDNLRELLAPWANSQALADDADGARGRQGSPAKV 355 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 LP+ WL DP+D TVP GA+IM SGG Sbjct: 356 VLPEGWLDDPEDATVPEGAEIMHSGG 381 >tr|Q8FMP2|Q8FMP2_COREF Tax_Id=152794 SubName: Full=Putative transcription regulator;[Corynebacterium efficiens] Length = 381 Score = 471 bits (1212), Expect = e-131 Identities = 243/386 (62%), Positives = 273/386 (70%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNV FRTLCRE E + GTISGLYVCEMVTARA Sbjct: 15 ILAPMAGVTNVAFRTLCRE-------------------QEMQRTGTISGLYVCEMVTARA 55 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAPDE+PRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 56 LVERNEKTLHMTTFAPDENPRSLQLYTVDPQYTYEAAKMIVDENLADHIDMNFGCPVPKV 115 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+A+PYKRRLF IV+AAVRATEGT IPVTVKFR+GIDDEHHTHLD Sbjct: 116 TRRGGGSAIPYKRRLFENIVSAAVRATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAG 175 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG ADW +IA+LK+ + +PVLGNGDI+ A DA MM TGCD Sbjct: 176 AKSVALHARTAAQRYSGQADWNEIARLKEHLADTGVPVLGNGDIFAAEDATRMMEQTGCD 235 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSAA G P P PTLGEV I+ RH +LL+ H GE KG+RD+ Sbjct: 236 GVVVGRGCLGRPWLFAELSAAVRGEPIPEEPTLGEVTRIILRHAELLMQHDGELKGIRDL 295 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFP G E R LA V T EL LL + + A G RGR+GS A V Sbjct: 296 RKHMGWYLRGFPVGGEFRANLARVSTYAELGELLAPWGTSTARAEDADGARGRKGSSAKV 355 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALPD WL DP+D TVP+GA++ SGG Sbjct: 356 ALPDGWLDDPEDDTVPVGAEMENSGG 381 >tr|C8NK90|C8NK90_COREF Tax_Id=196164 SubName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-;[Corynebacterium efficiens YS-314] Length = 381 Score = 471 bits (1212), Expect = e-131 Identities = 243/386 (62%), Positives = 273/386 (70%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNV FRTLCRE E + GTISGLYVCEMVTARA Sbjct: 15 ILAPMAGVTNVAFRTLCRE-------------------QEMQRTGTISGLYVCEMVTARA 55 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAPDE+PRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 56 LVERNEKTLHMTTFAPDENPRSLQLYTVDPQYTYEAAKMIVDENLADHIDMNFGCPVPKV 115 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+A+PYKRRLF IV+AAVRATEGT IPVTVKFR+GIDDEHHTHLD Sbjct: 116 TRRGGGSAIPYKRRLFENIVSAAVRATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAG 175 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG ADW +IA+LK+ + +PVLGNGDI+ A DA MM TGCD Sbjct: 176 AKSVALHARTAAQRYSGQADWNEIARLKEHLADTGVPVLGNGDIFAAEDATRMMEQTGCD 235 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSAA G P P PTLGEV I+ RH +LL+ H GE KG+RD+ Sbjct: 236 GVVVGRGCLGRPWLFAELSAAVRGEPIPEEPTLGEVTRIILRHAELLMQHDGELKGIRDL 295 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFP G E R LA V T EL LL + + A G RGR+GS A V Sbjct: 296 RKHMGWYLRGFPVGGEFRANLARVSTYAELGELLAPWGTSTARAEDADGARGRKGSSAKV 355 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALPD WL DP+D TVP+GA++ SGG Sbjct: 356 ALPDGWLDDPEDDTVPVGAEMENSGG 381 >tr|A4QGW8|A4QGW8_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 363 Score = 467 bits (1201), Expect = e-129 Identities = 240/382 (62%), Positives = 271/382 (70%), Gaps = 21/382 (5%) Query: 5 MAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARALVER 64 MAGVTNV FRTLCRE E + GTISGLYVCEMVTARALVER Sbjct: 1 MAGVTNVAFRTLCRE-------------------QEMQRTGTISGLYVCEMVTARALVER 41 Query: 65 NAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKVTRRG 124 N T+HMTTFAPDE+PRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKVTRRG Sbjct: 42 NEKTMHMTTFAPDENPRSLQLYTVDPKYTYEAAKMIVDENLADHIDMNFGCPVPKVTRRG 101 Query: 125 GGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXX 184 GG+A+PYKRRLF IV+AAV+ATEGT IPVTVKFR+GIDDEHHTHLD Sbjct: 102 GGSAIPYKRRLFENIVSAAVKATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAGAKSV 161 Query: 185 XXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCDGVVI 242 QRYSG ADW +IA+LK+ + IPVLGNGDI+ ASDA MM TGCDGVV+ Sbjct: 162 ALHARTAAQRYSGEADWNEIARLKEHLADTGIPVLGNGDIFAASDATRMMEQTGCDGVVV 221 Query: 243 GRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRKHI 302 GRGCLGRPWLFAELSAA G P PT GEV +I+ RH +LL+ H GE KG+RD+RKH+ Sbjct: 222 GRGCLGRPWLFAELSAAVRGEEIPEEPTFGEVTQIILRHAELLMQHDGETKGLRDLRKHM 281 Query: 303 AWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVALPD 362 WYL GFP G E R+ LA V T EL+ LL + + A G RGRQG+PA VALPD Sbjct: 282 GWYLRGFPVGGEFRSNLAKVSTYVELEDLLAPWADSTAKAEDAEGARGRQGAPAKVALPD 341 Query: 363 SWLTDPDDCTVPIGADIMESGG 384 WL DP+D TVP GA++ SGG Sbjct: 342 GWLDDPEDATVPKGAEMENSGG 363 >tr|C2BMH5|C2BMH5_9CORY Tax_Id=525264 SubName: Full=Possible dihydrouridine synthase;[Corynebacterium pseudogenitalium ATCC 33035] Length = 379 Score = 463 bits (1191), Expect = e-128 Identities = 238/386 (61%), Positives = 267/386 (69%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNV FRTLCRE E + GT+SGLYVCEMVTARA Sbjct: 13 ILAPMAGVTNVAFRTLCRE-------------------QELQRTGTVSGLYVCEMVTARA 53 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAP E PRSLQ+YTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 54 LVERNEKTLHMTTFAPQEDPRSLQIYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKV 113 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKRRLFG IV+AAV+ATEGT IPVTVK R+GIDDEHHTHLD Sbjct: 114 TRRGGGSALPYKRRLFGNIVSAAVKATEGTNIPVTVKMRVGIDDEHHTHLDAGRIAVESG 173 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG A W +IA+LK+ + +PVLGNGDI+ A DA MM TGCD Sbjct: 174 AAAVTLHGRTAAQRYSGEARWDEIARLKEHLADTGVPVLGNGDIFRAEDARRMMEQTGCD 233 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GV +GRGCLGRPWLFAEL AA G PA PTLGEV +++ RH +LL H GED RDI Sbjct: 234 GVQVGRGCLGRPWLFAELGAALRGESIPAEPTLGEVTQVILRHAELLAEHDGEDNASRDI 293 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKHI WYL GFP G ++R LA V +LD L LL + A G RGRQGSP+ V Sbjct: 294 RKHIGWYLRGFPVGGQVRAGLAKVNSLDALRELLAPWAESDALAADADGARGRQGSPSKV 353 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALPD WL DP+D VP+ ADIM SGG Sbjct: 354 ALPDGWLDDPEDDCVPVAADIMNSGG 379 >tr|C6RCI7|C6RCI7_9CORY Tax_Id=553206 SubName: Full=Dihydrouridine synthase TIM-barrel protein nifR3;[Corynebacterium tuberculostearicum SK141] Length = 379 Score = 462 bits (1189), Expect = e-128 Identities = 237/386 (61%), Positives = 267/386 (69%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNV FRTLCRE E + GT+SGLYVCEMVTARA Sbjct: 13 ILAPMAGVTNVAFRTLCRE-------------------QELQRTGTVSGLYVCEMVTARA 53 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAP E PRSLQ+YTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 54 LVERNEKTLHMTTFAPQEDPRSLQIYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKV 113 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKRRLFG IV+AAV+ATEGT IPVTVK R+GIDDEHHTHLD Sbjct: 114 TRRGGGSALPYKRRLFGNIVSAAVKATEGTNIPVTVKMRVGIDDEHHTHLDAGRIAVESG 173 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG A W +IA+LK+ + +PVLGNGDI+ A DA MM TGCD Sbjct: 174 AAAVTLHGRTAAQRYSGEARWDEIARLKEHLADTGVPVLGNGDIFRAEDARRMMEQTGCD 233 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GV +GRGCLGRPWLFAEL AA G PA PTLGEV +++ RH +LL H GED RDI Sbjct: 234 GVQVGRGCLGRPWLFAELGAALRGESIPAEPTLGEVTQVILRHAELLAEHDGEDNASRDI 293 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKHI WYL GFP G ++R LA V ++D L LL + A G RGRQGSP+ V Sbjct: 294 RKHIGWYLRGFPVGGQVRAGLAKVSSIDALRELLAPWAESDALAADADGARGRQGSPSKV 353 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALPD WL DP+D VP+ ADIM SGG Sbjct: 354 ALPDGWLDDPEDDCVPVAADIMNSGG 379 >tr|C0WH14|C0WH14_9CORY Tax_Id=525260 SubName: Full=Dihydrouridine synthase;[Corynebacterium accolens ATCC 49725] Length = 381 Score = 460 bits (1184), Expect = e-127 Identities = 236/386 (61%), Positives = 269/386 (69%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNV FRTLCRE E ++ GT+SGLYVCEMVTARA Sbjct: 15 ILAPMAGVTNVAFRTLCRE-------------------QELARTGTVSGLYVCEMVTARA 55 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTFAP+E PRSLQ+YTVDP TY AAK++ DE LADHIDMNFGCP+PKV Sbjct: 56 LVERNEKTMHMTTFAPNEDPRSLQIYTVDPEYTYKAAKIIVDENLADHIDMNFGCPVPKV 115 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKRRLFG IV+AAV+ATEGT IPVTVK R+GIDDEHHTHLD Sbjct: 116 TRRGGGSALPYKRRLFGNIVSAAVKATEGTNIPVTVKMRVGIDDEHHTHLDAGRIAVDSG 175 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG A W +IA+LK+ + +PVLGNGDI+ A DA MM TGCD Sbjct: 176 AAAVTLHGRTAAQRYSGDARWDEIARLKEHLADTGVPVLGNGDIFRADDARRMMEATGCD 235 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GV +GRGCLGRPWLFAEL AA G PA PTLGEV +++ RH +LL H GED RDI Sbjct: 236 GVQVGRGCLGRPWLFAELGAALRGESIPAEPTLGEVTQVILRHAELLAQHEGEDHASRDI 295 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKHI WYL GFP G ++R LA V +L+ L LL + A G RGRQGSP+ V Sbjct: 296 RKHIGWYLRGFPVGGQVRAGLAKVDSLESLRELLAPWADSDALAADADGARGRQGSPSKV 355 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALPD WL DP+D VP+GADI SGG Sbjct: 356 ALPDGWLDDPEDEFVPVGADIYNSGG 381 >tr|C3PIT8|C3PIT8_CORA7 Tax_Id=548476 SubName: Full=Putative uncharacterized protein;[Corynebacterium aurimucosum] Length = 381 Score = 460 bits (1183), Expect = e-127 Identities = 239/386 (61%), Positives = 268/386 (69%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAGVTNV FR LCRE E + GT+SGLYVCEMVTARA Sbjct: 15 VLAPMAGVTNVAFRVLCRE-------------------QEIEKTGTVSGLYVCEMVTARA 55 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVERN T+HMTTF P E PRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 56 LVERNPKTLHMTTFDPQEQPRSLQLYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKV 115 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKRRLFG IVAAAV+ATEGT IPVTVK R+GID+EH THLD Sbjct: 116 TRRGGGSALPYKRRLFGNIVAAAVKATEGTDIPVTVKMRVGIDEEHKTHLDAGRIAVAEG 175 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG ADW +IA+LK+ + IPVLGNGDI+ A+DA MM TGCD Sbjct: 176 AAAVALHGRTAAQRYSGHADWGEIARLKEHLADTGIPVLGNGDIFKATDAHDMMKQTGCD 235 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSA G P P PTLGEV I+ RH +LL H GE + RDI Sbjct: 236 GVVVGRGCLGRPWLFAELSAHLRGEPVPEEPTLGEVTRIMIRHAELLAQHEGEAQASRDI 295 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKHI WYL GFP G ++R L+ V +L++L LL + D A G RGRQGSPA V Sbjct: 296 RKHIGWYLRGFPVGGQVRAGLSRVNSLNDLRELLAPWADSPALADDADGARGRQGSPAKV 355 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 LP+ WL DP+D TVP GA+IM SGG Sbjct: 356 VLPEGWLDDPEDATVPEGAEIMHSGG 381 >tr|A4FQC1|A4FQC1_SACEN Tax_Id=405948 SubName: Full=Dihydrouridine synthase TIM-barrel protein nifR3;[Saccharopolyspora erythraea] Length = 387 Score = 459 bits (1182), Expect = e-127 Identities = 231/384 (60%), Positives = 268/384 (69%), Gaps = 26/384 (6%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAG+TNV FR LCRE+G+ GLYVCEM+T+RA Sbjct: 30 VLAPMAGITNVAFRWLCREYGA--------------------------GLYVCEMITSRA 63 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVER+ T+ M TF PDE PRS+QLY VDP T A +M+ +EGLADH+DMNFGCP+PKV Sbjct: 64 LVERHPTTMQMVTFDPDEHPRSMQLYGVDPETMGQAVRMIVEEGLADHVDMNFGCPVPKV 123 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGG+ALPYKRRLFG+IV AAVRA E +PVTVKFRIGIDDEH T+LD Sbjct: 124 TRKGGGSALPYKRRLFGEIVRAAVRAAEPAGVPVTVKFRIGIDDEHITYLDAGRIAEDNG 183 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSG ADW+ IA+LK+ VRTIPVLGNGDI+ A DAL M+A TGCDGV Sbjct: 184 AAAVALHGRTAAQRYSGQADWSAIARLKETVRTIPVLGNGDIFSADDALRMVAETGCDGV 243 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 V+GRGCLGRPWLF +L AAF G P P P LGEV ++RRHG+LL H GE+KG+RD+RK Sbjct: 244 VVGRGCLGRPWLFRDLQAAFAGEPVPEGPNLGEVCRVLRRHGELLADHMGEEKGLRDLRK 303 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+A YL GFP GS+LR+ LV L ELD LL +LD VPFP A GPRGRQGS V L Sbjct: 304 HMAQYLRGFPVGSDLRHRFGLVSGLAELDDLLAQLDHEVPFPVDAEGPRGRQGSAGRVVL 363 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DPDD VP A+I SGG Sbjct: 364 PEGWLDDPDDLCVPTAAEIDHSGG 387 >tr|C5VFJ9|C5VFJ9_9CORY Tax_Id=553207 SubName: Full=Putative tRNA-dihydrouridine synthase;[Corynebacterium matruchotii ATCC 14266] Length = 384 Score = 459 bits (1182), Expect = e-127 Identities = 238/386 (61%), Positives = 266/386 (68%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNV FRTLCRE E ++ GT+SGLYVCEM+TARA Sbjct: 18 ILAPMAGVTNVAFRTLCRE-------------------QELAKTGTVSGLYVCEMITARA 58 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVE N T HMTTF PDE PRSLQ YT DP TY AA+MVAD LADHIDMNFGCP+PKV Sbjct: 59 LVEGNEKTRHMTTFGPDEHPRSLQFYTTDPEYTYKAARMVADNNLADHIDMNFGCPVPKV 118 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKRRLFG IVAAAV+A GT IP+TVKFRIGIDD+HHTHLD Sbjct: 119 TRRGGGSALPYKRRLFGNIVAAAVKAVAGTNIPITVKFRIGIDDDHHTHLDAGRIAAAEG 178 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSGTADW+QIA LK+ + IPVLGNGDI+ A+DA MM TGCD Sbjct: 179 AAAVALHARTAAQRYSGTADWSQIAALKEHLADTGIPVLGNGDIFQATDAQKMMTETGCD 238 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSAA G P PTLGEV I+ RH +LL + GEDK RD+ Sbjct: 239 GVVVGRGCLGRPWLFAELSAALRGVDIPPEPTLGEVTGIILRHAELLTHYDGEDKACRDL 298 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFP G LR L+ +KTL +L L + A G RGRQGSPA V Sbjct: 299 RKHMGWYLRGFPVGGPLRAQLSAIKTLADLRAALEPWRESPALATDADGVRGRQGSPAKV 358 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 LP+ WL DP+D TVP GADIM SGG Sbjct: 359 ILPEGWLDDPEDETVPKGADIMHSGG 384 >tr|C7MRB7|C7MRB7_SACVD Tax_Id=471857 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Saccharomonospora viridis] Length = 379 Score = 459 bits (1180), Expect = e-127 Identities = 230/384 (59%), Positives = 267/384 (69%), Gaps = 26/384 (6%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAG+TNV FR LCRE+G+ GLYVCEM+TARA Sbjct: 22 VLAPMAGITNVAFRRLCREYGA--------------------------GLYVCEMITARA 55 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 +VER+ T+HM TF E PRS+QLY VDPAT A K++ EGLADHID NFGCP+ KV Sbjct: 56 VVERHPGTMHMMTFDASEYPRSMQLYGVDPATMKEAVKIIVGEGLADHIDANFGCPVAKV 115 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGGAALP+KR+LFG IV A+V A E +P TVKFR+GIDD+HHT+LD Sbjct: 116 TRKGGGAALPFKRKLFGNIVRASVEAAEPAGVPFTVKFRVGIDDDHHTYLDAGRIAEAEG 175 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSG ADW+ IA+LK+ V +IPVLGNGDI+ A DAL M+A TGCDGV Sbjct: 176 AAAVALHARTAAQRYSGKADWSHIARLKEAVTSIPVLGNGDIFTAHDALRMVAETGCDGV 235 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 VIGRGCLGRPWLF EL AAF G+P PA P LGEVA ++RRH +LLV H G DK MRD+RK Sbjct: 236 VIGRGCLGRPWLFGELEAAFAGKPIPAGPNLGEVARVLRRHAELLVEHDGPDKAMRDLRK 295 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWY GFP GS+LR A+V +LDELD L+ +LD PFP A+GPRGRQGSP V L Sbjct: 296 HMAWYFMGFPVGSQLRRRFAMVSSLDELDELIAQLDHDAPFPADALGPRGRQGSPGKVTL 355 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P WL DPDD VP GADIM SGG Sbjct: 356 PHGWLDDPDDPCVPEGADIMHSGG 379 >tr|C0E5G0|C0E5G0_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 384 Score = 457 bits (1175), Expect = e-126 Identities = 236/386 (61%), Positives = 265/386 (68%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTNV FRTLCRE E ++ GT+SGLYVCEM+TARA Sbjct: 18 ILAPMAGVTNVAFRTLCRE-------------------QELAKTGTVSGLYVCEMITARA 58 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVE N T HMTTF PDE PRSLQ YT DP TY AA+MVAD LADHIDMNFGCP+PKV Sbjct: 59 LVEGNEKTRHMTTFGPDEHPRSLQFYTTDPEYTYKAARMVADNNLADHIDMNFGCPVPKV 118 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+ALPYKRRLFG IVAAAV+A GT IP+TVKFRIGIDD+HHTHLD Sbjct: 119 TRRGGGSALPYKRRLFGNIVAAAVKAVAGTDIPITVKFRIGIDDDHHTHLDAGRIAAAEG 178 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCD 238 QRYSGTADW+QI LK+ + IPVLGNGD++ A+DA MM TGCD Sbjct: 179 AAAVALHARTAAQRYSGTADWSQITALKEHLADTGIPVLGNGDVFQATDAQKMMTETGCD 238 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFAELSAA G P PTLGEV I+ RH +LL + GEDK RD+ Sbjct: 239 GVVVGRGCLGRPWLFAELSAALRGVDIPPEPTLGEVTGIILRHAELLTHYDGEDKACRDL 298 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFP G LR L+ +KTL +L L + A G RGRQGSPA V Sbjct: 299 RKHMGWYLRGFPVGGPLRVQLSAIKTLADLRAALEPWRESPALATDADGVRGRQGSPAKV 358 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 LP+ WL DP+D TVP GADIM SGG Sbjct: 359 ILPEGWLDDPEDETVPEGADIMHSGG 384 >tr|Q5Z290|Q5Z290_NOCFA Tax_Id=37329 SubName: Full=Putative dihydrouridine synthase;[Nocardia farcinica] Length = 382 Score = 451 bits (1161), Expect = e-125 Identities = 226/384 (58%), Positives = 261/384 (67%), Gaps = 24/384 (6%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAG+TN+ FR LCREFGS + +YVCEM+TARA Sbjct: 23 VLAPMAGITNLAFRKLCREFGSA------------------------TSIYVCEMITARA 58 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 +VERN T+HM +F DE PRS+QLY VDP T A +++ EG ADHIDMN GCP+PKV Sbjct: 59 VVERNEKTLHMMSFDADEHPRSMQLYGVDPQTLGEAVRIIVGEGWADHIDMNLGCPVPKV 118 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR GGGAALPYKR LF +IV A V A E +PVTVKFRIGIDD+HHT+LD Sbjct: 119 TRLGGGAALPYKRALFARIVRAMVAAAEPAGVPVTVKFRIGIDDDHHTYLDTGRIAEAEG 178 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSG ADW+ IA+LK+ V TIPVLGNGDI+ A DA+ MMA TGCDGV Sbjct: 179 ARAVSLHARTAAQRYSGQADWSAIARLKEAVTTIPVLGNGDIFAAEDAVRMMAETGCDGV 238 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 V+GRGCLGRPWLFAEL AA G+P P PP LG V E++ RHG LL H GEDK MRD+RK Sbjct: 239 VVGRGCLGRPWLFAELQAALRGQPLPEPPNLGRVGEVLYRHGALLSEHLGEDKAMRDLRK 298 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWYL GFP G++LR + A V +L +L L+ RLD PFP A GPRGRQGSP VAL Sbjct: 299 HMAWYLMGFPVGADLRRSFATVSSLAQLRDLIGRLDPTAPFPKDAEGPRGRQGSPGKVAL 358 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P WL DPDD VP AD+M SGG Sbjct: 359 PHGWLDDPDDPAVPTAADVMHSGG 382 >tr|C6WPQ6|C6WPQ6_ACTMD Tax_Id=446462 SubName: Full=TIM-barrel protein, nifR3 family; Flags: Precursor;[Actinosynnema mirum] Length = 393 Score = 448 bits (1153), Expect = e-124 Identities = 227/384 (59%), Positives = 266/384 (69%), Gaps = 25/384 (6%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 VLAPMAG+TN+ FR LCREFGS LYVCEM+TARA Sbjct: 35 VLAPMAGITNIAFRQLCREFGSP------------------------GSLYVCEMITARA 70 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 +VER++ T+ M F PDE PRS+QLY+VDP + A K++ E ADHIDMNFGCP+PKV Sbjct: 71 VVERDSKTMEMLAFGPDEHPRSMQLYSVDPVSMSEAVKLITGEDRADHIDMNFGCPVPKV 130 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGGAALPYKR+LF +IV AAVRA E +PVTVKFRIGIDDEH T+LD Sbjct: 131 TRKGGGAALPYKRKLFREIVRAAVRAAEPAGVPVTVKFRIGIDDEHLTYLDAGRIAEDEG 190 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 QRYSGTADW+ I +LK+ V +IPVLGNGDI+ A DAL M+A TGCDGV Sbjct: 191 AQAVALHARTAAQRYSGTADWSAITRLKEAVTSIPVLGNGDIFSARDALDMVARTGCDGV 250 Query: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 V+GRGCLGRPWLF EL AAF G P PAPPTLG+VA+I+ RHG LL H GE+KG+RD+RK Sbjct: 251 VVGRGCLGRPWLFGELQAAFRGEPLPAPPTLGKVADILWRHGALLADHLGEEKGVRDLRK 310 Query: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 H+AWYL GFP G +LR +LA+V TL EL L+ LD P A GPRGRQGSPA V L Sbjct: 311 HMAWYLKGFPVGGDLRRSLAMVSTLAELQDLVGLLDRTAEHPSDADGPRGRQGSPARVIL 370 Query: 361 PDSWLTDPDDCTVPIGADIMESGG 384 P+ WL DP+D VP A+ M SGG Sbjct: 371 PEGWLDDPEDAAVP-EAEEMHSGG 393 >tr|Q6NFI5|Q6NFI5_CORDI Tax_Id=1717 SubName: Full=Putative exported protein;[Corynebacterium diphtheriae] Length = 383 Score = 439 bits (1129), Expect = e-121 Identities = 224/385 (58%), Positives = 260/385 (67%), Gaps = 21/385 (5%) Query: 2 LAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARAL 61 LAPMAGVTN+ FRTLCRE E + GT+SGLY+CEM+TARAL Sbjct: 18 LAPMAGVTNIAFRTLCRE-------------------QELERTGTVSGLYICEMITARAL 58 Query: 62 VERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKVT 121 VERN T+HMTTF P E RSLQLYTVDP TY AAKM+A+ +ADHIDMNFGCP+PKVT Sbjct: 59 VERNEKTLHMTTFGPQEDIRSLQLYTVDPEYTYKAAKMIAENNMADHIDMNFGCPVPKVT 118 Query: 122 RRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXXX 181 +RGGG+ALPYKRRLFG IVAAAV+ EGT IP+TVKFR+GIDD+H T+LD Sbjct: 119 KRGGGSALPYKRRLFGNIVAAAVKGVEGTDIPITVKFRMGIDDDHLTYLDAGRIAAEEGA 178 Query: 182 XXXXXXXXXXXQRYSGTADWAQIAQLKQQVRT--IPVLGNGDIYDASDALAMMAVTGCDG 239 +RYSG A W I LK+ +R IPVLGNGDI+ A DA AM+ +GCDG Sbjct: 179 AAVTLHARTAAERYSGDAHWDAIGTLKEHMRDSGIPVLGNGDIFKAEDAKAMLDASGCDG 238 Query: 240 VVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIR 299 VV+GRGCLGRPWLFA +SAA G P PTLGEV I+ RH +LL H GE K RD+R Sbjct: 239 VVVGRGCLGRPWLFAGISAALRGEELPPEPTLGEVTRIIYRHAELLAEHDGEKKASRDMR 298 Query: 300 KHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVA 359 KH+ WY+ GFP G E R ALA + +L EL +L + + RGRQGSPA VA Sbjct: 299 KHMGWYMRGFPVGGEFRGALARINSLAELREVLAPFADSNALAADSDSARGRQGSPAKVA 358 Query: 360 LPDSWLTDPDDCTVPIGADIMESGG 384 LPD WL DPDD TVP GA+IM SGG Sbjct: 359 LPDGWLADPDDATVPEGAEIMHSGG 383 >tr|C4LH79|C4LH79_CORK4 Tax_Id=645127 SubName: Full=Putative uncharacterized protein;[Corynebacterium kroppenstedtii] Length = 361 Score = 439 bits (1128), Expect = e-121 Identities = 225/380 (59%), Positives = 261/380 (68%), Gaps = 25/380 (6%) Query: 11 VTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARALVERNAVTIH 70 + FR LCRE LE + GT SGLYVCEMVTARALVERN T+H Sbjct: 1 MAFRLLCRE-------------------LEIEKTGTTSGLYVCEMVTARALVERNEKTLH 41 Query: 71 MTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKVTRRGGGAALP 130 MT FAP+E+PRS+QLYT DP TY AA+M+AD+ LADHIDMNFGCP+PKVTRRGGGAALP Sbjct: 42 MTEFAPEETPRSMQLYTTDPKWTYEAARMIADDNLADHIDMNFGCPVPKVTRRGGGAALP 101 Query: 131 YKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXXXXX 190 YKRRLFG+IVAAAVR EGT IPVTVK R GIDD+H T LD Sbjct: 102 YKRRLFGEIVAAAVRGVEGTTIPVTVKMRTGIDDDHLTFLDAGAIAAAEGAQAVALHART 161 Query: 191 XXQRYSGTADWAQIAQLKQQV--RTIPVLGNGDIYDASDALAMMAVTGCDGVVIGRGCLG 248 QRYSGTADW +I +LK+ + +PVLGNGDI+ A+DA MM TGCDGVV+GRGCLG Sbjct: 162 AAQRYSGTADWNRIGELKEHLSGTGVPVLGNGDIFKATDAADMMDQTGCDGVVVGRGCLG 221 Query: 249 RPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRKHIAWYLHG 308 RPWLFAELSAA G P PA PT EV +++ RH +LL AH GE RD+RKH+ WYL G Sbjct: 222 RPWLFAELSAALRGEPLPAQPTFAEVCDVILRHTRLLAAHSGESTACRDMRKHMGWYLRG 281 Query: 309 FPAGSELRNALALVKTLDELDCLLNRLDG----AVPFPDAAIGPRGRQGSPAWVALPDSW 364 +PAGS+LR + + +++EL +LN + A PD A GPRGRQGS V LP+ W Sbjct: 282 YPAGSDLRQKVTRITSINELKEILNTVVSDPALASALPDDADGPRGRQGSAKAVTLPEGW 341 Query: 365 LTDPDDCTVPIGADIMESGG 384 L DPDD TVP GADIM SGG Sbjct: 342 LDDPDDRTVPAGADIMHSGG 361 >tr|C8NYZ4|C8NYZ4_9CORY Tax_Id=585529 (dusB)SubName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-;[Corynebacterium genitalium ATCC 33030] Length = 388 Score = 429 bits (1102), Expect = e-118 Identities = 214/386 (55%), Positives = 269/386 (69%), Gaps = 22/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVT++ FR LCRE +E+ GT+SGLYVCEM+TARA Sbjct: 23 ILAPMAGVTDMPFRVLCRE-------------------IEEDLTGTVSGLYVCEMITARA 63 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LVE N T+HMTTFAP E+PRS+QLYTVDP TY A +M+ + +ADH+DMNFGCP+PKV Sbjct: 64 LVEGNEKTLHMTTFAPQETPRSMQLYTVDPEYTYKAVRMIVEGDMADHVDMNFGCPVPKV 123 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TRRGGG+A+PYKR L+ IV+AAV+A +G ++PVTVKFR+GIDDEH THLD Sbjct: 124 TRRGGGSAIPYKRGLYRNIVSAAVKAADG-RVPVTVKFRVGIDDEHKTHLDAGRIAAEEG 182 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQV--RTIPVLGNGDIYDASDALAMMAVTGCD 238 QRYSGTADW +I++L + + IPVLGNGDI+ ++DA MM T CD Sbjct: 183 ASAVTLHARTAAQRYSGTADWDEISRLVEHMDGTGIPVLGNGDIFASTDAEEMMERTACD 242 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GVV+GRGCLGRPWLFA+LSA G PA PTLG+VA I+ RHG+LL AH GE++G R++ Sbjct: 243 GVVVGRGCLGRPWLFAQLSAQLRGEVVPAEPTLGQVARIMARHGELLAAHNGEERGCREL 302 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH+ WYL GFP G + R+ LA V TL+EL L+ + + +AA RGR+GS A V Sbjct: 303 RKHVGWYLRGFPVGGQFRSELARVSTLEELHSHLSAIFDSDAMAEAADEARGRKGSSAKV 362 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 LP+ WL DP+D VP+GA+I SGG Sbjct: 363 VLPEGWLDDPEDDAVPVGAEIENSGG 388 >tr|C0XPC3|C0XPC3_9CORY Tax_Id=525263 SubName: Full=Possible dihydrouridine synthase;[Corynebacterium lipophiloflavum DSM 44291] Length = 393 Score = 416 bits (1070), Expect = e-114 Identities = 210/386 (54%), Positives = 256/386 (66%), Gaps = 21/386 (5%) Query: 1 VLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 +LAPMAGVTN+ FR LCRE +E+ GT SGLYVCEM+TARA Sbjct: 27 ILAPMAGVTNMPFRVLCRE-------------------IEEELTGTSSGLYVCEMITARA 67 Query: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 LV RN T+HMTTFA E+PRSLQLYTVDP TY A +M+ +E +ADH+DMNFGCP+PKV Sbjct: 68 LVARNQKTLHMTTFADVETPRSLQLYTVDPKFTYDAVRMIVEEDIADHVDMNFGCPVPKV 127 Query: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 180 TR+GGG+A+P+KRRL+ IV+AAVRA EG+ IP+TVKFRIGIDD HHTHLD Sbjct: 128 TRKGGGSAIPFKRRLYANIVSAAVRAAEGSGIPITVKFRIGIDDAHHTHLDAGRIAAEEG 187 Query: 181 XXXXXXXXXXXXQRYSGTADWAQIAQLKQQV--RTIPVLGNGDIYDASDALAMMAVTGCD 238 QRYSG A W++I +L + + +PV+GNGDI+ A DA M+ T C Sbjct: 188 AAAVALHARTADQRYSGQAHWSEIRRLVEHMDGSGVPVIGNGDIFAADDAEKMLETTNCH 247 Query: 239 GVVIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDI 298 GV +GRGCLGRPWLFA++ A G P PTLGEVA I+ RH +LL H GE+ RDI Sbjct: 248 GVEVGRGCLGRPWLFAQIGAQLRGEEIPPEPTLGEVARIIYRHAELLALHDGEEHACRDI 307 Query: 299 RKHIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWV 358 RKH WYL GFP G E R LA V +L EL LL+ + + + A RGRQGS + V Sbjct: 308 RKHTGWYLRGFPVGGEFRKDLARVNSLAELSALLDTIADSTERAEHAEDARGRQGSSSKV 367 Query: 359 ALPDSWLTDPDDCTVPIGADIMESGG 384 ALPD WL DP+D TVP GA++ +GG Sbjct: 368 ALPDGWLDDPEDDTVPEGAEMDSNGG 393 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.321 0.138 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 2,827,674,322 Number of extensions: 116429729 Number of successful extensions: 274561 Number of sequences better than 10.0: 3692 Number of HSP's gapped: 266588 Number of HSP's successfully gapped: 4081 Length of query: 384 Length of database: 3,808,957,724 Length adjustment: 139 Effective length of query: 245 Effective length of database: 2,258,647,078 Effective search space: 553368534110 Effective search space used: 553368534110 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 81 (35.8 bits)