BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ML2247 (516 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,153,314 sequences; 3,808,957,724 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|Q50160|Q50160_MYCLE Tax_Id=1769 (cpsA)SubName: Full=Putative ... 990 0.0 tr|B8ZSW7|B8ZSW7_MYCLB Tax_Id=561304 (cpsA)SubName: Full=Putativ... 990 0.0 tr|Q7TWE7|Q7TWE7_MYCBO Tax_Id=1765 (cpsA)SubName: Full=POSSIBLE ... 748 0.0 tr|O06347|O06347_MYCTU Tax_Id=1773 (cpsA)SubName: Full=POSSIBLE ... 748 0.0 tr|C6DM03|C6DM03_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 748 0.0 tr|C1AHU1|C1AHU1_MYCBT Tax_Id=561275 (cpsA)SubName: Full=Putativ... 748 0.0 tr|A5U8F9|A5U8F9_MYCTA Tax_Id=419947 (cpsA)SubName: Full=Putativ... 748 0.0 tr|A1KPG9|A1KPG9_MYCBP Tax_Id=410289 (cpsA)SubName: Full=Possibl... 748 0.0 tr|Q7D5G2|Q7D5G2_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 748 0.0 tr|A5WT55|A5WT55_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 748 0.0 tr|A4KTF3|A4KTF3_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 748 0.0 tr|A2VPQ7|A2VPQ7_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 748 0.0 tr|B2HHX0|B2HHX0_MYCMM Tax_Id=216594 (cpsA)SubName: Full=Conserv... 724 0.0 tr|Q743K6|Q743K6_MYCPA Tax_Id=1770 (cpsA)SubName: Full=CpsA;[Myc... 723 0.0 tr|A0QAL4|A0QAL4_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope... 723 0.0 tr|A0PUS6|A0PUS6_MYCUA Tax_Id=362242 (cpsA)SubName: Full=Conserv... 703 0.0 tr|B1MGX4|B1MGX4_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 524 e-146 tr|C2AS67|C2AS67_TSUPA Tax_Id=521096 SubName: Full=Cell envelope... 360 2e-97 tr|C0ZNS0|C0ZNS0_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR... 335 8e-90 tr|C3JHK0|C3JHK0_RHOER Tax_Id=596309 SubName: Full=Transcription... 334 2e-89 tr|B4V4U7|B4V4U7_9ACTO Tax_Id=465541 SubName: Full=CpsA;[Strepto... 300 2e-79 tr|C7Q6T6|C7Q6T6_CATAD Tax_Id=479433 SubName: Full=Cell envelope... 293 5e-77 tr|C6WNS4|C6WNS4_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 283 3e-74 tr|C7MWA0|C7MWA0_SACVD Tax_Id=471857 SubName: Full=Cell envelope... 278 9e-73 tr|A0QNN5|A0QNN5_MYCS2 Tax_Id=246196 SubName: Full=Cell envelope... 278 9e-73 tr|A4FDR6|A4FDR6_SACEN Tax_Id=405948 SubName: Full=Transcription... 272 9e-71 tr|C7Q249|C7Q249_CATAD Tax_Id=479433 SubName: Full=Cell envelope... 272 9e-71 tr|C5VEH2|C5VEH2_9CORY Tax_Id=553207 SubName: Full=Transcription... 260 3e-67 tr|C3JG80|C3JG80_RHOER Tax_Id=596309 SubName: Full=Transcription... 260 3e-67 tr|C0ZWW9|C0ZWW9_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR... 258 2e-66 tr|C0E111|C0E111_9CORY Tax_Id=566549 SubName: Full=Putative unch... 257 2e-66 tr|C1B1C0|C1B1C0_RHOOB Tax_Id=632772 SubName: Full=Putative LytR... 257 3e-66 tr|Q0S305|Q0S305_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 255 8e-66 tr|Q5YQQ1|Q5YQQ1_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 253 3e-65 tr|A0QMX7|A0QMX7_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope... 251 2e-64 tr|Q73U03|Q73U03_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 250 4e-64 tr|C2ARH9|C2ARH9_TSUPA Tax_Id=521096 SubName: Full=Cell envelope... 249 5e-64 tr|Q8FRK7|Q8FRK7_COREF Tax_Id=152794 SubName: Full=Putative unch... 248 2e-63 tr|C8NLU8|C8NLU8_COREF Tax_Id=196164 SubName: Full=LytR family t... 248 2e-63 tr|C6WJ74|C6WJ74_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 246 7e-63 tr|Q6NIT6|Q6NIT6_CORDI Tax_Id=1717 SubName: Full=Putative unchar... 245 9e-63 tr|B2HEM5|B2HEM5_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 245 9e-63 tr|A4QC74|A4QC74_CORGB Tax_Id=340322 SubName: Full=Putative unch... 245 1e-62 tr|C2GH00|C2GH00_9CORY Tax_Id=548478 SubName: Full=Transcription... 245 1e-62 tr|C0VQM3|C0VQM3_9CORY Tax_Id=548477 SubName: Full=Transcription... 245 1e-62 tr|A0PRH5|A0PRH5_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 244 2e-62 tr|Q8NSD6|Q8NSD6_CORGL Tax_Id=1718 SubName: Full=Transcriptional... 243 6e-62 tr|C7QEE1|C7QEE1_CATAD Tax_Id=479433 SubName: Full=Cell envelope... 242 1e-61 tr|C7MUW6|C7MUW6_SACVD Tax_Id=471857 SubName: Full=Cell envelope... 240 3e-61 tr|Q7TWU9|Q7TWU9_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 239 5e-61 >tr|Q50160|Q50160_MYCLE Tax_Id=1769 (cpsA)SubName: Full=Putative uncharacterized protein cpsA; SubName: Full=CpsA;[Mycobacterium leprae] Length = 516 Score = 990 bits (2560), Expect = 0.0 Identities = 501/516 (97%), Positives = 501/516 (97%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL Sbjct: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA Sbjct: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE Sbjct: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR Sbjct: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR Sbjct: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA Sbjct: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 Query: 361 STIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPT 420 STIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPT Sbjct: 361 STIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPT 420 Query: 421 TTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETI 480 TTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETI Sbjct: 421 TTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETI 480 Query: 481 TSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TSQKVG DQGKPIDGGGIPCVN Sbjct: 481 TSQKVGTYPPYSYNTSPYPTPDQGKPIDGGGIPCVN 516 >tr|B8ZSW7|B8ZSW7_MYCLB Tax_Id=561304 (cpsA)SubName: Full=Putative uncharacterized protein cpsA;[Mycobacterium leprae] Length = 516 Score = 990 bits (2560), Expect = 0.0 Identities = 501/516 (97%), Positives = 501/516 (97%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL Sbjct: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA Sbjct: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE Sbjct: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR Sbjct: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR Sbjct: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA Sbjct: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 Query: 361 STIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPT 420 STIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPT Sbjct: 361 STIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPT 420 Query: 421 TTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETI 480 TTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETI Sbjct: 421 TTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETI 480 Query: 481 TSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TSQKVG DQGKPIDGGGIPCVN Sbjct: 481 TSQKVGTYPPYSYNTSPYPTPDQGKPIDGGGIPCVN 516 >tr|Q7TWE7|Q7TWE7_MYCBO Tax_Id=1765 (cpsA)SubName: Full=POSSIBLE CONSERVED PROTEIN CPSA;[Mycobacterium bovis] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|O06347|O06347_MYCTU Tax_Id=1773 (cpsA)SubName: Full=POSSIBLE CONSERVED PROTEIN CPSA;[Mycobacterium tuberculosis] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|C6DM03|C6DM03_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|C1AHU1|C1AHU1_MYCBT Tax_Id=561275 (cpsA)SubName: Full=Putative uncharacterized protein cpsA;[Mycobacterium bovis] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A5U8F9|A5U8F9_MYCTA Tax_Id=419947 (cpsA)SubName: Full=Putative conserved protein CpsA;[Mycobacterium tuberculosis] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A1KPG9|A1KPG9_MYCBP Tax_Id=410289 (cpsA)SubName: Full=Possible conserved protein cpsA;[Mycobacterium bovis] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|Q7D5G2|Q7D5G2_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 513 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 2 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 61 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 62 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 121 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 122 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 181 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 182 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 241 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 242 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 301 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 302 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 357 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 358 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 417 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 418 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 475 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 476 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 513 >tr|A5WT55|A5WT55_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A4KTF3|A4KTF3_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 512 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 1 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 61 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 121 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 181 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 241 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 301 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 356 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 357 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 416 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 417 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 474 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 475 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A2VPQ7|A2VPQ7_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 513 Score = 748 bits (1932), Expect = 0.0 Identities = 378/518 (72%), Positives = 430/518 (83%), Gaps = 8/518 (1%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS R RHRA+ +PSRIR L+R MTL S VA+L+TGAGYWVAH AL IT+SQAL Sbjct: 2 MARSEGNRPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQAL 61 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 T +DPRS+ NN+NILLIGLDSRKDQ+GNDLPWS+LKQLHAGDS+DGGYNTNTLILVHVGA Sbjct: 62 TPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGA 121 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 D K VAFSIPRDDWVPF+ VPGYNHIKIKEAYGLTKQYV ++L +QGV+D+KELET+GRE Sbjct: 122 DGKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGRE 181 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 A RAATLR VRSLTGV IDYFAE+NLAGFYDL TLGGV+VCLNHAVYDSYSGADFPAGR Sbjct: 182 AARAATLRAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGR 241 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRL+A++ALAFVRQRHGLDNGDLDRTHRQQAF+SSVMREL D+GTFTNLD+L +LMAVAR Sbjct: 242 QRLNAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVAR 301 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW+EDL +R+G LA +FRTLPVVRYDNI+GQ VNIIDP AI+AEVA Sbjct: 302 KDVVLSAGWDEDLFRRMGDLAG----GNVEFRTLPVVRYDNIDGQDVNIIDPTAIRAEVA 357 Query: 361 STIGTASPA--TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 + G+A P TA +KPNPSTVVDV+NAG ++GLAS+V L K GYTAGQVRDR SG+ Sbjct: 358 AAFGSAPPTSQTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGD 417 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDE 478 P TT+I+YGAGA+TDAQNVA LL IDAPN DP +A GHIRV VDTN+SLPA +++T Sbjct: 418 PFTTAIEYGAGAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEAT--A 475 Query: 479 TITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 TS + DQG PIDGGG+PCVN Sbjct: 476 AATSTETSTYPLYGGGTTTDPTPDQGAPIDGGGVPCVN 513 >tr|B2HHX0|B2HHX0_MYCMM Tax_Id=216594 (cpsA)SubName: Full=Conserved hypothetical membrane protein CpsA;[Mycobacterium marinum] Length = 511 Score = 724 bits (1870), Expect = 0.0 Identities = 367/511 (71%), Positives = 418/511 (81%), Gaps = 10/511 (1%) Query: 10 RHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTD 69 RHRA+ KPS IR ++R+ MTL S VA+ +TGAGYWVAH AL IT+SQALT +DPRST Sbjct: 7 RHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTG 66 Query: 70 NNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNKAVAFSI 129 NN+NILLIGLDSRKDQ+GNDLPWSILK LHAGDS+ GGYNTNTLILVHV AD K VAFSI Sbjct: 67 NNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAFSI 126 Query: 130 PRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRI 189 PRDDWVPF+ VPGYNHIKIKEAYGLTKQYV Q+LIDQGVT Q+ELET+GREAGRAATLR Sbjct: 127 PRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREAGRAATLRA 186 Query: 190 VRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEAL 249 VR+LTGV IDYFAEVNLAGFYDL LGGVEVCLNHAV DSYSGADFPAGRQRLDA++AL Sbjct: 187 VRALTGVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQAL 246 Query: 250 AFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGW 309 AFVRQRHGLDNGDLDRTHRQQAF+SSVMR+L D+GTFTNLD+L SLMAVARKD+VLS GW Sbjct: 247 AFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGW 306 Query: 310 NEDLIQRLGTLAN-DVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVASTIG---T 365 +EDLI+R+G LA D+ +FRTLPVVRYDNI+GQ VNI+DP AIKAEVA+ IG T Sbjct: 307 DEDLIRRMGELAGADI-----EFRTLPVVRYDNIDGQDVNIVDPAAIKAEVAAAIGTTST 361 Query: 366 ASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQ 425 A+ AT TP+KP+PSTVVDV+NAG ++GLAS+V L+K GYT QVRDR SG+P T+I+ Sbjct: 362 AATATTTPAKPSPSTVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIK 421 Query: 426 YGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKV 485 YG GA DA N+ TLL IDAP Q D + GHI+V VDTN+S+PA +DS D+T T K Sbjct: 422 YGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPDDSD-DDTTTYPKP 480 Query: 486 GXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 D G+PIDGGG+PCVN Sbjct: 481 NAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 >tr|Q743K6|Q743K6_MYCPA Tax_Id=1770 (cpsA)SubName: Full=CpsA;[Mycobacterium paratuberculosis] Length = 520 Score = 723 bits (1867), Expect = 0.0 Identities = 368/524 (70%), Positives = 417/524 (79%), Gaps = 12/524 (2%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS RHRA+ +PSR R LTR+ L S A+ LTGAGY+VAH AL ITVS AL Sbjct: 1 MARSGGAHRRHRAVRQPSRFRKGLTRTLGALVSVAAIGLTGAGYYVAHGALGGITVSNAL 60 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 DDPRS+ +N+NILLIGLDSRKDQ GNDLP+SILK LHAGDS+DGGYNTNTLILVHV A Sbjct: 61 QPDDPRSSGDNMNILLIGLDSRKDQDGNDLPYSILKHLHAGDSDDGGYNTNTLILVHVSA 120 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 DNK VAFSIPRDDWVPFS VPGYNHIKIKEAYGLTKQYV QKL +QG + QKELET+GRE Sbjct: 121 DNKVVAFSIPRDDWVPFSGVPGYNHIKIKEAYGLTKQYVAQKLANQGTSSQKELETKGRE 180 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 AGRAATLR VR+LTGV IDYFAEVNLAGFYDL TLGGVEVCLNH VYDSYSGADFPAGR Sbjct: 181 AGRAATLRAVRNLTGVPIDYFAEVNLAGFYDLAQTLGGVEVCLNHPVYDSYSGADFPAGR 240 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRLDASEAL+FVRQRHGLDNGDLDRTHRQQAFISSVM+EL GTFTN+DKL++LMAVAR Sbjct: 241 QRLDASEALSFVRQRHGLDNGDLDRTHRQQAFISSVMQELQAAGTFTNIDKLKNLMAVAR 300 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW +D+IQRLG LA +FRTLPVVRYDNI+GQ VNI+DP AIKAEVA Sbjct: 301 KDVVLSAGWTDDMIQRLGGLAG----GNIEFRTLPVVRYDNIDGQDVNIVDPAAIKAEVA 356 Query: 361 STIGTASPA---TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSG 417 + IG +P T+T P+PSTVVDV+N+G ++GLASEV LKK GYT GQVRDR SG Sbjct: 357 AAIGANAPTSAPTSTSVAPDPSTVVDVVNSGSMSGLASEVSHALKKRGYTTGQVRDRESG 416 Query: 418 EPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMD 477 +P T+I+YGAGA DA+N+A LLS+DAPNQ P +A GHIR+ VDTN+++P +D+ +D Sbjct: 417 DPAATTIEYGAGAQNDARNLANLLSLDAPNQPSPSIAPGHIRLTVDTNFTMPTTDDTQLD 476 Query: 478 ET-----ITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 +T T+ DQGKPIDGGG+PCVN Sbjct: 477 DTTSTSSTTTSSKAKTYYYNGTTTTYPTPDQGKPIDGGGVPCVN 520 >tr|A0QAL4|A0QAL4_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope-related function transcriptional attenuator domain protein;[Mycobacterium avium] Length = 521 Score = 723 bits (1867), Expect = 0.0 Identities = 368/524 (70%), Positives = 417/524 (79%), Gaps = 12/524 (2%) Query: 1 MARSHNPRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 MARS RHRA+ +PSR R LTR+ L S A+ LTGAGY+VAH AL ITVS AL Sbjct: 2 MARSGGAHRRHRAVRQPSRFRKGLTRTLGALVSVAAIGLTGAGYYVAHGALGGITVSNAL 61 Query: 61 TTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGA 120 DDPRS+ +N+NILLIGLDSRKDQ GNDLP+SILK LHAGDS+DGGYNTNTLILVHV A Sbjct: 62 QPDDPRSSGDNMNILLIGLDSRKDQDGNDLPYSILKHLHAGDSDDGGYNTNTLILVHVSA 121 Query: 121 DNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGRE 180 DNK VAFSIPRDDWVPFS VPGYNHIKIKEAYGLTKQYV QKL +QG + QKELET+GRE Sbjct: 122 DNKVVAFSIPRDDWVPFSGVPGYNHIKIKEAYGLTKQYVAQKLANQGTSSQKELETKGRE 181 Query: 181 AGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGR 240 AGRAATLR VR+LTGV IDYFAEVNLAGFYDL TLGGVEVCLNH VYDSYSGADFPAGR Sbjct: 182 AGRAATLRAVRNLTGVPIDYFAEVNLAGFYDLAQTLGGVEVCLNHPVYDSYSGADFPAGR 241 Query: 241 QRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVAR 300 QRLDASEAL+FVRQRHGLDNGDLDRTHRQQAFISSVM+EL GTFTN+DKL++LMAVAR Sbjct: 242 QRLDASEALSFVRQRHGLDNGDLDRTHRQQAFISSVMQELQAAGTFTNIDKLKNLMAVAR 301 Query: 301 KDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVA 360 KDVVLSAGW +D+IQRLG LA +FRTLPVVRYDNI+GQ VNI+DP AIKAEVA Sbjct: 302 KDVVLSAGWTDDMIQRLGGLAG----GNIEFRTLPVVRYDNIDGQDVNIVDPAAIKAEVA 357 Query: 361 STIGTASPA---TATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSG 417 + IG +P T+T P+PSTVVDV+N+G ++GLASEV LKK GYT GQVRDR SG Sbjct: 358 AAIGADAPTSAPTSTSVAPDPSTVVDVVNSGSMSGLASEVSHALKKRGYTTGQVRDRESG 417 Query: 418 EPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMD 477 +P T+I+YGAGA DA+N+A LLS+DAPNQ P +A GHIR+ VDTN+++P +D+ +D Sbjct: 418 DPAATTIEYGAGAQNDARNLANLLSLDAPNQPSPSIAPGHIRLTVDTNFTMPTTDDTQLD 477 Query: 478 ET-----ITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 +T T+ DQGKPIDGGG+PCVN Sbjct: 478 DTTSTSSTTTSSKAKTYYYNGTTTTYPTPDQGKPIDGGGVPCVN 521 >tr|A0PUS6|A0PUS6_MYCUA Tax_Id=362242 (cpsA)SubName: Full=Conserved hypothetical membrane protein CpsA;[Mycobacterium ulcerans] Length = 491 Score = 703 bits (1814), Expect = 0.0 Identities = 355/497 (71%), Positives = 405/497 (81%), Gaps = 10/497 (2%) Query: 24 LTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILLIGLDSRK 83 ++R MTL S VA+ +TGAGYWVAH AL IT+SQALT +DPRST NN+NILLIGLDSRK Sbjct: 1 MSRILMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRK 60 Query: 84 DQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNKAVAFSIPRDDWVPFSDVPGY 143 DQ+GNDLPWSILK LHAGDS+ GGYNTNTLILVHV AD K VAFSIPRDDWVPF+ VPGY Sbjct: 61 DQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAFSIPRDDWVPFTGVPGY 120 Query: 144 NHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAE 203 NHIKIKEAYGLTKQYV Q+LIDQGVT Q+ELET+GREAGRAATLR VR+LTGV IDYFAE Sbjct: 121 NHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREAGRAATLRAVRALTGVPIDYFAE 180 Query: 204 VNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDL 263 VNLAGFYDL LGGVEVCLNHAV DSYSGADFPAGRQRLDA++ALAFVRQRHGLDNGDL Sbjct: 181 VNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNGDL 240 Query: 264 DRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLAN- 322 DRTHRQQ F+SSVMR+L D+GTFTNLD+L SLMAVARKD+VLS GW+EDL++R+G LA Sbjct: 241 DRTHRQQVFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWDEDLVRRMGELAGA 300 Query: 323 DVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVASTIG---TASPATATPSKPNPS 379 D+ +FRTLPVVRYDNI+GQ VNI+DP AIKAEVA+ IG TA+ AT TP+KP+PS Sbjct: 301 DI-----EFRTLPVVRYDNIDGQDVNIVDPAAIKAEVAAAIGSTSTAATATTTPAKPSPS 355 Query: 380 TVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADTDAQNVAT 439 TVVDV+NAG ++GLAS+V L+K GYT QVRDR SG+P T+I+YG GA DA N+ T Sbjct: 356 TVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNLGT 415 Query: 440 LLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKVGXXXXXXXXXXXXX 499 LL IDAP Q D + GHI+V VDTN+S+PA +DS D+T K Sbjct: 416 LLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPDDSD-DDTTVYPKPNAYYNGGDDSSSYP 474 Query: 500 XXDQGKPIDGGGIPCVN 516 D G+PIDGGG+PCVN Sbjct: 475 APDHGQPIDGGGVPCVN 491 >tr|B1MGX4|B1MGX4_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 514 Score = 524 bits (1349), Expect = e-146 Identities = 285/524 (54%), Positives = 351/524 (66%), Gaps = 18/524 (3%) Query: 1 MARSHNPRHRHRAIHKPSR----IRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITV 56 M+R R A+ K ++ + A R+ L + ++++TGAG+ V ++A + Sbjct: 1 MSRDTGRRRPKHALPKSNKRWSVSKTAAARTIFALLACGSLVVTGAGWQVFYKAFSHVPT 60 Query: 57 SQALTTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILV 116 S A + +S+D ++N+LLIGLDSRKDQ GNDLP ++L QLHAGDS+ GGYNTNTLILV Sbjct: 61 SGA-EAEGGKSSDGSMNMLLIGLDSRKDQDGNDLPRAVLNQLHAGDSDAGGYNTNTLILV 119 Query: 117 HVGADNKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELET 176 HVGADNK AFSIPRDDWVP +PGY HIKIKEAYGLTK KL+++G+TDQ LE Sbjct: 120 HVGADNKVTAFSIPRDDWVPAEGIPGYKHIKIKEAYGLTKANEADKLVNEGITDQATLEQ 179 Query: 177 QGREAGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADF 236 Q REAGR ATL V LTG IDYFAEVNL GFYDL LGG+ VCLN+AVYDSYSGA+F Sbjct: 180 QSREAGRRATLNAVHRLTGQPIDYFAEVNLVGFYDLASELGGITVCLNNAVYDSYSGANF 239 Query: 237 PAGRQRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLM 296 PAG Q L+AS+ALAFVRQRHGL+NGDLDRTHRQQAF+ SVM++L + GT T++ KL LM Sbjct: 240 PAGEQTLNASQALAFVRQRHGLENGDLDRTHRQQAFLISVMQQLRNAGTLTDITKLNGLM 299 Query: 297 AVARKDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIK 356 V KDVVLS GW E QRLG +A + F+TLPVVRYDNING VNI+DPVAI+ Sbjct: 300 NVVHKDVVLSKGWTEKQFQRLGQIA----DGNVNFQTLPVVRYDNINGADVNIVDPVAIR 355 Query: 357 AEVASTI--GTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDR 414 A+VA+ A+PA+A + P++ VDV+NA +GLAS V L GYT G VRD Sbjct: 356 AKVAAAFKGEDAAPASAATT---PTSTVDVVNATSTSGLASTVSSALVSRGYTKGDVRDP 412 Query: 415 SSGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDS 474 SGE T T+I YG GAD DA+ ++T+L I+ ADP LA G IRV++ T YS P+D S Sbjct: 413 LSGESTGTAIDYGVGADADAKAMSTMLGIETEPVADPTLAPGRIRVMLGTGYSAPSDVLS 472 Query: 475 TMDETITSQKVGXXXXXXXXXXXXXXXDQGKPI--DGGGIPCVN 516 D S D GKP+ G+PCVN Sbjct: 473 AEDSGTASSM--SSSSSSGASGDYAPPDSGKPVVSSNSGVPCVN 514 >tr|C2AS67|C2AS67_TSUPA Tax_Id=521096 SubName: Full=Cell envelope-related function transcriptional attenuator common domain;[Tsukamurella paurometabola DSM 20162] Length = 402 Score = 360 bits (924), Expect = 2e-97 Identities = 194/345 (56%), Positives = 246/345 (71%), Gaps = 5/345 (1%) Query: 29 MTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDD-PRSTDNNINILLIGLDSRKDQQG 87 + L S V + +TG +W + + +S AL +ST + NILL+GLD+RKDQ G Sbjct: 3 IALLSMVVLAVTGTLWWSTNLVIGGFNLSGALAEAKVAQSTGGDRNILLMGLDTRKDQDG 62 Query: 88 NDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNK-AVAFSIPRDDWVPFSDVPGYNHI 146 NDLP +LKQLHAGDS++GGYNTNTLIL+HV AD K VAFSIPRDD+V V + Sbjct: 63 NDLPDDVLKQLHAGDSSNGGYNTNTLILMHVPADGKKVVAFSIPRDDYVTLVGVKSRSKG 122 Query: 147 KIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAEVNL 206 KIKEAYGL K V +L QGVTD+KELE + RE+ RAATL V L GV ID+FAEV+L Sbjct: 123 KIKEAYGLRKAEVQDQLAAQGVTDRKELEAKSRESARAATLATVERLVGVPIDHFAEVSL 182 Query: 207 AGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDLDRT 266 GFYDL TLGGVEVCLN V DSYSGA FPAGRQ+L+A+++L+FVRQRHGL +GDLDRT Sbjct: 183 VGFYDLAKTLGGVEVCLNKPVRDSYSGAAFPAGRQKLNAAQSLSFVRQRHGLADGDLDRT 242 Query: 267 HRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLANDVGE 326 HRQQAFI+ VM +L + G F ++ KL+SL++VA+KDVV+S+GW+ +++ A + Sbjct: 243 HRQQAFIAGVMMQLQNQGVFGDVRKLQSLISVAQKDVVISSGWD---LEQFAKQAGKIAG 299 Query: 327 NRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVASTIGTASPATA 371 F TLPV+ YD I+ QAVNI+DP AI+A+V G + PA A Sbjct: 300 TALTFTTLPVLGYDTIDEQAVNIVDPKAIRAQVQKAFGQSVPAPA 344 >tr|C0ZNS0|C0ZNS0_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus erythropolis] Length = 509 Score = 335 bits (859), Expect = 8e-90 Identities = 218/527 (41%), Positives = 295/527 (55%), Gaps = 39/527 (7%) Query: 7 PRH---RHRAIHKPSRIRIALTRSFMTLTSFVAVLL-TGAGYWVAHRALEDITVSQALTT 62 PRH RHR +P R +++ R + +L+ G G++V + S AL+ Sbjct: 5 PRHSATRHRRRRQPQRSTLSVGRKLAAASLSTTILVGVGIGWYVQSDLTSGLYRSDALSA 64 Query: 63 ---DDPRSTDNNINILLIGLDSRKDQQGNDLPWS-ILKQLHAGDSNDGGYNTNTLILVHV 118 D S D + NILLIGLDSRK G+DLP + +LHAGDS+ GGYNTNTLIL+HV Sbjct: 65 LGEDAGSSLDGDTNILLIGLDSRKAMDGSDLPAEFVTDKLHAGDSDVGGYNTNTLILLHV 124 Query: 119 GADN-KAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQ 177 D KA A +IPRDD+V VPGY KIKEAYG+ K KL+ GVTD E Q Sbjct: 125 PGDGGKASAVAIPRDDYV---SVPGYGMAKIKEAYGMAKADADAKLVADGVTDPAAREQQ 181 Query: 178 GREAGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFP 237 RE GR +TL V++L V ID+FAEVNL GFYD+ +G V+VCLN+ V D +SGA+FP Sbjct: 182 AREVGRRSTLTTVQNLLKVPIDHFAEVNLMGFYDVVSAIGPVQVCLNNPVQDDFSGANFP 241 Query: 238 AGRQRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMA 297 AG Q LDAS+AL+FVRQRHGLDNGDLDRTHRQQAFIS+V+ L +G N+ K+ +L Sbjct: 242 AGVQTLDASQALSFVRQRHGLDNGDLDRTHRQQAFISAVIANLKGSGVIGNIPKMTALAD 301 Query: 298 VARKDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKA 357 V +KDVV+ + + R + A+ + F TLP+ Y+ ++GQ VN++DP +++ Sbjct: 302 VVKKDVVIDSAMDP---VRFASQASALAGGNIDFYTLPIEGYETVDGQDVNMVDPARLRS 358 Query: 358 EVASTIGTASPATATPSKPNPST---VVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDR 414 EV+ A+A ST VVD+ N GL + + +K G G+V Sbjct: 359 EVSRIFAGGDSASAPAMDTAISTGNEVVDIRNGTATDGLGAALAAAMKASGVEVGEV--- 415 Query: 415 SSGEPTTTS-IQYGAGADTDAQNVATLLSIDA-PNQADPKLASGHIRVIVDTNYSLPADE 472 S+ T S + YG GA A+ +A L + A PN+ + A+ + V++ E Sbjct: 416 STAAATAKSVVSYGVGAKAVAEALAEQLGVAAVPNE---QAAAESVSVLI--------GE 464 Query: 473 DSTMDETITSQKVGXXXXXXXXXXXXXXXDQGKPI---DGGGIPCVN 516 D+ +T+ S QG PI GGIPCV+ Sbjct: 465 DNA--QTVFSAAPAQSDSSVSAGTVPDTGAQGSPIRADANGGIPCVD 509 >tr|C3JHK0|C3JHK0_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, LytR family;[Rhodococcus erythropolis SK121] Length = 526 Score = 334 bits (856), Expect = 2e-89 Identities = 219/527 (41%), Positives = 294/527 (55%), Gaps = 39/527 (7%) Query: 7 PRH---RHRAIHKPSRIRIALTRSFMTLTSFVAVLL-TGAGYWVAHRALEDITVSQALTT 62 PRH RHR +P R +++ R + +L+ G G++V + S AL+ Sbjct: 22 PRHSATRHRRRRQPQRSTLSVGRKLAAASLSTTILVGVGIGWYVQSDLTSGLYRSDALSA 81 Query: 63 ---DDPRSTDNNINILLIGLDSRKDQQGNDLPWS-ILKQLHAGDSNDGGYNTNTLILVHV 118 D S D + NILLIGLDSRK G+DLP + +LHAGDS+ GGYNTNTLIL+HV Sbjct: 82 LGEDAGSSLDGDTNILLIGLDSRKAMDGSDLPAEFVTDKLHAGDSDVGGYNTNTLILLHV 141 Query: 119 GADN-KAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQ 177 D KA A +IPRDD+V VPGY KIKEAYG+ K KLI GVTD E Q Sbjct: 142 PGDGGKASAVAIPRDDYVA---VPGYGMAKIKEAYGMAKADADAKLIADGVTDPAAREQQ 198 Query: 178 GREAGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFP 237 RE GR +TL V++L V ID+FAEVNL GFYD+ +G V+VCLN+ V D +SGA+FP Sbjct: 199 AREVGRRSTLTTVQNLLKVPIDHFAEVNLMGFYDVVSAIGPVQVCLNNPVQDDFSGANFP 258 Query: 238 AGRQRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMA 297 AG Q LDAS+AL+FVRQRHGLDNGDLDRTHRQQAFIS+V+ L +G N+ K+ +L Sbjct: 259 AGVQTLDASQALSFVRQRHGLDNGDLDRTHRQQAFISAVIANLKGSGVIGNIPKMTALAD 318 Query: 298 VARKDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKA 357 V +KDVV+ + + R + A+ + F TLP+ Y+ ++GQ VN++DP +++ Sbjct: 319 VVKKDVVIDSAMDP---VRFASQASALAGGNIDFYTLPIEGYETVDGQDVNMVDPARLRS 375 Query: 358 EVASTIGTASPATATPSKPNPST---VVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDR 414 EV+ A+A ST VVD+ N GL + + K G G+V Sbjct: 376 EVSRIFAGGDSASAPVMDTAVSTGNEVVDIRNGTATDGLGAALAAVTKASGVEVGEV--- 432 Query: 415 SSGEPTTTS-IQYGAGADTDAQNVATLLSIDA-PNQADPKLASGHIRVIVDTNYSLPADE 472 S+ T S + YG GA A+ +A L + A PN+ + A+ + V++ E Sbjct: 433 STAAATAKSVVSYGVGAKAVAEALAEQLGVAAVPNE---QAAAESVSVLI--------GE 481 Query: 473 DSTMDETITSQKVGXXXXXXXXXXXXXXXDQGKPI---DGGGIPCVN 516 D+ +T+ S QG PI GGIPCV+ Sbjct: 482 DNA--QTVFSAAPARSDSSVSAGTVPDTGAQGSPIRADANGGIPCVD 526 >tr|B4V4U7|B4V4U7_9ACTO Tax_Id=465541 SubName: Full=CpsA;[Streptomyces sp. Mg1] Length = 402 Score = 300 bits (769), Expect = 2e-79 Identities = 167/353 (47%), Positives = 219/353 (62%), Gaps = 8/353 (2%) Query: 29 MTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILLIGLDSRKDQQGN 88 + +T + G W A++ L S +S + NILL+GLDSR+DQ G Sbjct: 21 LLITGCAVTAIAGGTAWYAYQDLAGSIGSSKALEGAEKSKFGDTNILLMGLDSRRDQNGE 80 Query: 89 DLPWSILKQLHAGDSNDGGYNTNTLILVHVGADN-KAVAFSIPRDDWVPFSDVPGYNHIK 147 LP +L +LHAG S+ GGYN NTLIL+HV D + AFS+PRDD+V +PG+ K Sbjct: 81 KLPEEVLDKLHAGSSDIGGYNANTLILLHVPGDGGRPTAFSVPRDDFVA---IPGHGKDK 137 Query: 148 IKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAEVNLA 207 +K+AYGL K L QGV DQ+ELE +GREAGR A L VR+ GV +D+FAE+NLA Sbjct: 138 VKKAYGLAKAAREDALTAQGVKDQRELEREGREAGRKAQLETVRNFLGVPVDHFAELNLA 197 Query: 208 GFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDLDRTH 267 GFY L L GV VCL V D YSGADFPAGRQ L+ ++LAFVRQRHGL+ GDLDRT Sbjct: 198 GFYHLADALKGVPVCLKKPVKDKYSGADFPAGRQNLNGQQSLAFVRQRHGLEAGDLDRTK 257 Query: 268 RQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLANDVGEN 327 RQQAF++ +L GTFT+ KL L+ A++DVV AGW DL+ + A ++ Sbjct: 258 RQQAFLAGATHKLNSVGTFTDPTKLMKLIDSAKEDVVTDAGW--DLLSFV-KQAKNLSGG 314 Query: 328 RTQFRTLPVVRYDNINGQAVNIIDPVAIKAEVASTIG-TASPATATPSKPNPS 379 +T+F TLP+ R+ +G+ +N++D + IK +A IG AS PS P S Sbjct: 315 KTRFVTLPIERFGRNHGEDINVVDDMKIKRLIAEQIGPKASEGPGGPSTPPAS 367 >tr|C7Q6T6|C7Q6T6_CATAD Tax_Id=479433 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Catenulispora acidiphila] Length = 382 Score = 293 bits (749), Expect = 5e-77 Identities = 178/368 (48%), Positives = 229/368 (62%), Gaps = 16/368 (4%) Query: 33 SFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILLIGLDSRKDQQGNDLPW 92 S + + LTGA W+ L S AL P+S D ++NILL+GLDSR+D G+DLP Sbjct: 4 SVLLISLTGA--WLRAAVLGGFQRSAALGGTIPKSHDGSVNILLMGLDSRRDNHGHDLPA 61 Query: 93 SILKQLHAGDSND-GGYNTNTLILVHVGADNK-AVAFSIPRDDWVPFSDVPGYNHIKIKE 150 +IL +LHAG S+D GGYNTNTLIL+HV AD A A S+PRDDWV D+P KIKE Sbjct: 62 AILSKLHAGSSSDIGGYNTNTLILLHVPADGSPATAVSVPRDDWV---DIPNLGWHKIKE 118 Query: 151 AYGLTKQYVTQKLIDQGVTDQKE-LETQGREAGRAATLRIVRSLTGVSIDYFAEVNLAGF 209 AYG K L+ G + LE GREAGRAA++ V+ L V ID+FAEVNLAGF Sbjct: 119 AYGRAKAAQETALVKAGRGPTGDALEAAGREAGRAASIAAVQGLLNVPIDHFAEVNLAGF 178 Query: 210 YDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDLDRTHRQ 269 YD+ LGGV VCLN V D YSGA FPAG Q LD S ALAFVRQRHGL GDLDRT RQ Sbjct: 179 YDVAVALGGVTVCLNKPVQDDYSGAAFPAGVQTLDGSNALAFVRQRHGLPGGDLDRTRRQ 238 Query: 270 QAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNE-DLIQRLGTLANDVGENR 328 QAF+S+V R+L G +++ KL L+ ++DVV+ ++ LI + G+L R Sbjct: 239 QAFLSAVQRKLSADGVLSDVGKLSDLVDAVKRDVVVDDSFDVLSLISKAGSLK----AGR 294 Query: 329 TQFRTLPVVRYDNINGQAVNIIDPVAIKAEVASTIGTA-SPATATPSKPNPSTVVDVINA 387 QF TLP+ + +G+ VN+IDP ++A + A S ++ S +P++VV +A Sbjct: 295 IQFHTLPIEGFATRDGEDVNLIDPAKVQAAMKEYFSDATSGGSSGGSGTHPTSVVQAASA 354 Query: 388 GRLTGLAS 395 T LA+ Sbjct: 355 A--TALAT 360 >tr|C6WNS4|C6WNS4_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator;[Actinosynnema mirum] Length = 732 Score = 283 bits (725), Expect = 3e-74 Identities = 188/514 (36%), Positives = 271/514 (52%), Gaps = 39/514 (7%) Query: 17 PSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTD--DPRSTDNNINI 74 PSR+R+A R+ + L S +L TG GY + ++I + ++ D + D +I+I Sbjct: 244 PSRVRLA-GRTALALVSTAVLLATGYGYKNLNALTDNIATTDVISADAGGEKPQDGSIDI 302 Query: 75 LLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADN-KAVAFSIPRDD 133 L++G+DSR D +GN LP IL +L AG S DGG NT+TLIL+H+ D+ KAVA S PRD Sbjct: 303 LMVGMDSRTDSKGNPLPQEILNELQAGGSEDGGLNTDTLILLHIPNDSGKAVAVSFPRDS 362 Query: 134 WVPFSDVPG-YNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRS 192 +V D+PG Y KI AYG K ++L G + LE + R+AG + + + + Sbjct: 363 YV---DIPGGYGKHKINSAYGYGKNAALEELEGAGESGTA-LELKARQAGSKSLISTIEN 418 Query: 193 LTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFV 252 L+GV ID++AEVNL GFY++T +GGV+VCLN+AV D SGADF G Q + EAL+FV Sbjct: 419 LSGVKIDHYAEVNLVGFYEITKAVGGVDVCLNNAVQDDLSGADFKKGPQTIQGREALSFV 478 Query: 253 RQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNED 312 RQR+GL GDLDR RQQ F++ + ++ GT T+ KL L+ K + L GW+ Sbjct: 479 RQRYGLLRGDLDRVVRQQVFMAGLANKVLSAGTLTDPGKLGDLIDALSKSITLDEGWD-- 536 Query: 313 LIQRLGTLANDVGENRTQFRTLPVVRYD---NINGQAVNIIDPVA-------IKAEVAST 362 + R T + +F+T+P + + +G AV II K+E Sbjct: 537 -VLRFATQMKGLTGGSMEFKTIPTGNPELMTDSDGMAVEIIPSQVKKFFKDFAKSEEEKD 595 Query: 363 IGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTT 422 T PAT T V+V NA + GLAS V Q L + AG D + + + Sbjct: 596 KATVDPATVT---------VEVRNASGIPGLASRVLQELVALKFVAGDA-DNADADQVAS 645 Query: 423 SIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITS 482 ++ YG G + AQ VA L D + D +A+G RV+V ++Y P + + Sbjct: 646 AVLYGKGGEAGAQAVADALG-DVEIKEDATVAAGTARVVVGSSYDGPGVAN------LLG 698 Query: 483 QKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 Q++ G I+ GGI CVN Sbjct: 699 QRLLALDGGFRTQQGPQEDQTGAEINAGGIRCVN 732 >tr|C7MWA0|C7MWA0_SACVD Tax_Id=471857 SubName: Full=Cell envelope-related function transcriptional attenuator common domain protein;[Saccharomonospora viridis] Length = 522 Score = 278 bits (712), Expect = 9e-73 Identities = 181/508 (35%), Positives = 278/508 (54%), Gaps = 41/508 (8%) Query: 25 TRSFMTLTSFVAVLLTGAGY-WVAHRALED-ITVSQALTTDDPR-STDNNINILLIGLDS 81 T + + L ++LT GY W A + L D +T++ + D D +ILL+G+DS Sbjct: 40 TGARIVLAMVSVLVLTITGYAWAAMKGLVDGLTMADVIGEDTGELPADGARDILLVGMDS 99 Query: 82 RKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADN-KAVAFSIPRDDWVPFSDV 140 R D QGN LP +L +L+AG + DG NT+TLILVH+ D KAVA S+PRD +V ++ Sbjct: 100 RVDAQGNPLPQDMLAKLNAGVA-DGELNTDTLILVHIPNDGRKAVALSLPRDSYV---NI 155 Query: 141 PGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDY 200 PG+ KI AY K ++L +GVTD++ELE + + G + V +LTG ++D Sbjct: 156 PGFGQHKINSAYARGKAAAKERLRQEGVTDEQELEVRSNQEGAKTLIATVEALTGQTVDN 215 Query: 201 FAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDN 260 +A +NL GFY++T+ +GGVEVCLN A D YSGA+F AGRQ + +ALAFVRQRHGL Sbjct: 216 YASINLLGFYEITNAVGGVEVCLNQATRDPYSGANFKAGRQSISGVDALAFVRQRHGLLR 275 Query: 261 GDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTL 320 GDLDR RQQ F++ + ++ GT T+ KL L +K VV++ GW+ I Sbjct: 276 GDLDRVVRQQVFLAGLANKVLSAGTLTDPGKLERLTEAIKKSVVVNKGWD---ILSFAQQ 332 Query: 321 ANDVGENRTQFRTLPV--VRYDNINGQAVNIIDPVAIKAEVASTIGTASPATATPSKPNP 378 D + +F T+P+ ++ +G A+ I+P ++ VA G + A+ TP+ P Sbjct: 333 MKDFTGGQIEFHTIPIENPEFETPDGLAIK-INPSEVRNFVAKLSGRKAEASPTPA-PEE 390 Query: 379 STVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADTDAQNVA 438 T VD+ N + GLAS V + L G+T G+V + + + ++ +Q +G + A+ VA Sbjct: 391 IT-VDIYNTSNIQGLASSVSEALVAQGFTQGEVANDTPRQ--SSVVQSASGERSSAEAVA 447 Query: 439 TLLSIDAPNQADPKLASGHIRVIVDTNY--------SLPADEDSTMDETITS--QKVGXX 488 L + + +P ++ GH+RV++ +Y PA +T ++T ++ G Sbjct: 448 AALGREIAVEENPDVSPGHVRVLLAPDYQQNGNSTPGAPAGGGNTPGTSVTGAPRQAGEE 507 Query: 489 XXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 +PI G+ CVN Sbjct: 508 AAE-------------QPITADGVTCVN 522 >tr|A0QNN5|A0QNN5_MYCS2 Tax_Id=246196 SubName: Full=Cell envelope-related function transcriptional attenuator common domain;[Mycobacterium smegmatis] Length = 533 Score = 278 bits (712), Expect = 9e-73 Identities = 185/479 (38%), Positives = 265/479 (55%), Gaps = 29/479 (6%) Query: 5 HNPRHRHRAIHKPSR------IRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQ 58 ++P H A+ KP R +R+A R+ + LT+ + TG G+ H AL+ IT S Sbjct: 2 NSPAH---ALTKPRRRTPRRAVRLA-RRALVGLTAAAILAGTGMGWVTYHGALDGITTSN 57 Query: 59 ALTTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHV 118 AL + D NIL++GLDSR DQ GN LP + + LHAGD GGYN N LI+VH+ Sbjct: 58 ALAGESGSVGDTE-NILIMGLDSRLDQHGNPLPEDVYQALHAGDETVGGYNANVLIVVHL 116 Query: 119 GADN-KAVAFSIPRDDWVPFSDVP-GYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELET 176 D A AFSIPRDD+V + P G K+K+AYG Q + + D E Sbjct: 117 PGDGGPATAFSIPRDDYVDLAGCPSGICKGKVKQAYGFAYQ-AEMEATESEEEDPATREQ 175 Query: 177 QGREAGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADF 236 + REAGR A + VR+L G+ ID+F EV L F+++ + + VCLN D YSGADF Sbjct: 176 KAREAGRKAEIATVRNLLGIPIDHFVEVTLGAFFEIAKAVAPITVCLNDDTSDPYSGADF 235 Query: 237 PAGRQRLDASEALAFVRQRHGLDN---GDLDRTHRQQAFISSVMRELGDTGTFTNLDKLR 293 G Q++DA++A+AFVRQR +++ DLDRT RQQAF+++++ L +G ++ KLR Sbjct: 236 RKGVQQIDAAQAMAFVRQRRDINDENFTDLDRTRRQQAFLAALVSALRQSGALSSPSKLR 295 Query: 294 SLMAVARKDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRY-DNINGQAVNIIDP 352 L+ V +++V L AG++ + + D TLP+ + N G+ +NIID Sbjct: 296 GLLDVTKQNVALDAGFDLASFTKRASALTDAPPT---LYTLPIKEFGQNAYGEDINIIDV 352 Query: 353 VAIKAEVASTIGTASPA--TATPSKP---NPSTVVDVINAGRLTGLASEVFQTLKKHGYT 407 I+ V + PA TATP KP +DVIN TGLA+++ T +T Sbjct: 353 PTIRKIVHDLVSKDDPATTTATPDKPELNGHGATLDVINGSTYTGLAAKLQTTFAADNFT 412 Query: 408 AGQVRDRSSGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNY 466 GQ+ D + EP TT I YG GAD A ++AT L + A +D LA +R+ + T++ Sbjct: 413 EGQIGDAEALEPATT-IDYGPGADAAAHSLATELGVTA-TPSDWVLAD-TVRLTIGTDF 468 >tr|A4FDR6|A4FDR6_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator;[Saccharopolyspora erythraea] Length = 521 Score = 272 bits (695), Expect = 9e-71 Identities = 196/531 (36%), Positives = 271/531 (51%), Gaps = 54/531 (10%) Query: 2 ARSHNPRHRHRAIHKPSRIRI-ALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQAL 60 ARS P R P R R AL R+ L S + ++LTG WV+ L+ L Sbjct: 29 ARSTRPGSRASTDGSPRRRRWRALARTATALASGIVLVLTGYA-WVSLDRLQG-----GL 82 Query: 61 TTDDPRST--DNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHV 118 +T D + D ++ILL+GLD R D +GN LP +L++L G+++ T+TL+L+H+ Sbjct: 83 STSDVTAAAEDGALDILLVGLDGRTDARGNPLPEELLRELRTGETDSS--LTDTLVLLHI 140 Query: 119 GAD-NKAVAFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQ 177 D ++ VA+S+PRD +V D G+ KI AYG K +L QGV D ELE + Sbjct: 141 PVDRSRTVAYSLPRDSYVSIPD--GHGKHKINSAYGRAKAAAHAQLRAQGVADPAELERR 198 Query: 178 GREAGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFP 237 +AGR +R V LTGV +D++AEVNL GFY LT +GGVEVCLN V D YSGA FP Sbjct: 199 SSDAGRKLLVRTVEKLTGVGVDHYAEVNLLGFYQLTRAIGGVEVCLNAPVNDPYSGARFP 258 Query: 238 AGRQRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMA 297 AGRQ + +ALAFVRQRHGL GDLDR RQQAF++ + R + TGT N +L + Sbjct: 259 AGRQLISGGDALAFVRQRHGLPRGDLDRVQRQQAFMAGLARSVLSTGTLANPARLNGMFD 318 Query: 298 VARKDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPV--VRYDNINGQAVNIIDPVAI 355 + VVL GW D++ + G + T F T+PV YD +GQAV +DP + Sbjct: 319 AVEQSVVLDQGW--DVLAFAEQMQGLAGGDIT-FDTIPVEDPDYDTPDGQAVR-VDPRRV 374 Query: 356 KAEVASTIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRS 415 A + PA + V+V+N R++GLAS V + L V D Sbjct: 375 SAAIRRA-DDGLPAEPPRPPELERSAVEVVNTTRVSGLASRVQEVLDAADIPVRDVDD-- 431 Query: 416 SGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADE--- 472 +G T+ + +GAG A+ VA L P ++D L IRV++ +Y P + Sbjct: 432 TGRARTSVVLHGAGGADVARYVAGHLG-GLPVRSDSSLRERRIRVLLGDDYRGPGADGLA 490 Query: 473 -------DSTMDETITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 D T T+ + +PI+ IPCVN Sbjct: 491 PAPLVRLDGERQPTATASE--------------------EPINADEIPCVN 521 >tr|C7Q249|C7Q249_CATAD Tax_Id=479433 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Catenulispora acidiphila] Length = 547 Score = 272 bits (695), Expect = 9e-71 Identities = 182/494 (36%), Positives = 255/494 (51%), Gaps = 56/494 (11%) Query: 33 SFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTD------------NNINILLIGLD 80 S V VL TGA W ++ L S TTD N++N+LLIGLD Sbjct: 20 SVVVVLATGA-VWFGNKQL----TSGGHTTDSINQIKPGQQGYVAPHLGNDVNLLLIGLD 74 Query: 81 SRKDQQGNDLPWSILK-QLHAGDSNDGGYNTNTLILVHVGADNKAV-AFSIPRDDWVPF- 137 SRKD GNDLP S+++ +LHAG S G YNTN LIL+H+ A+ V A+SIPRD V Sbjct: 75 SRKDMNGNDLPTSLVEGELHAGSSAIGYYNTNVLILMHIPANGGTVTAYSIPRDSDVERP 134 Query: 138 ---SDVPGYNHI--------KIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAAT 186 + +PG + KIKEAYG K + KL G+ D+ + E + RE GR AT Sbjct: 135 GGPAAIPGLGTVQVPDMGKGKIKEAYGDAKNFADTKLAATGLKDKAKEEAESREVGREAT 194 Query: 187 LRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYD-----SYSGADFPAGRQ 241 +R V++LTGV +D+ AEVNL GFYD + +G ++VCL YD + +G + PAG Sbjct: 195 IRAVQNLTGVHVDHLAEVNLLGFYDTVNAIGNIQVCLKAPAYDPIEDGAGTGLNLPAGVS 254 Query: 242 RLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARK 301 +DA+ AL FVRQR L NGDLDRTHRQQAF++SV ++L G ++ ++ L+ V + Sbjct: 255 TIDAATALQFVRQRFHLPNGDLDRTHRQQAFLASVTQKLKQEGILNDIGSMQKLLDVVKN 314 Query: 302 DVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEV-- 359 DVV+ GW+ + + A+++ +F TLP I ++ +DPVAIK V Sbjct: 315 DVVIDDGWS---VLDFASQASNLTGGNAEFITLPTTGTVMIGTESALTVDPVAIKKTVTT 371 Query: 360 --------------ASTIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHG 405 AST G+ P + P P + + N + TGLA +V L G Sbjct: 372 AFTNDAAVAPPPTTASTAGSTPPPAPPSTTPTPQANISIENGTKTTGLALKVSGALFDAG 431 Query: 406 YTAGQVRDRSSGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTN 465 + + + TT I+YGAG + A+ + L A + G I V + + Sbjct: 432 IPVSKTGNGGNNVQHTT-IRYGAGEEALAKQLQAKLGTKTAPTASSSVPKGSIVVTIGYD 490 Query: 466 YSLPADEDSTMDET 479 Y LP + ST T Sbjct: 491 YKLPPAKTSTSTST 504 >tr|C5VEH2|C5VEH2_9CORY Tax_Id=553207 SubName: Full=Transcriptional regulator, LytR family;[Corynebacterium matruchotii ATCC 14266] Length = 496 Score = 260 bits (664), Expect = 3e-67 Identities = 166/479 (34%), Positives = 254/479 (53%), Gaps = 27/479 (5%) Query: 26 RSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTD---NNINILLIGLDSR 82 ++ ++ S + ++++G GY+ R +I + +L TD I+IL++G DSR Sbjct: 2 KALVSFMSALVLIVSGVGYFAIGRVQSNIASAGSLDLGAAGLTDALDGAIDILMVGNDSR 61 Query: 83 KDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNK-AVAFSIPRDDWVPFSDVP 141 D QGN L ++ LHAGD NT+T++++ + D K A A SIPRD ++ +V Sbjct: 62 SDAQGNPLTPQEIELLHAGDEEAD--NTDTIMVIRIPNDGKSATAISIPRDTYI-HDEVA 118 Query: 142 GYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYF 201 G + KI Y K ++L+ G D ELE + ++AGR ++ + L+G+++D++ Sbjct: 119 G--NTKINGVYSAYKAEEKERLLQSGQQDGPELEEKAKDAGRKGLIKAIHELSGITVDHY 176 Query: 202 AEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNG 261 AEV L GF LT +GGVEVCL A D +SGADFPAG+Q L + LAFVRQRHGL G Sbjct: 177 AEVGLLGFVLLTDAVGGVEVCLKEATKDEFSGADFPAGKQTLTGATGLAFVRQRHGLPRG 236 Query: 262 DLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLA 321 DLDR RQQA+++S++ ++ TGT T+ KL SL + + V + W+ + +L T Sbjct: 237 DLDRIVRQQAYMASLVSKVLSTGTLTSPAKLASLGSAVTRSVTIDKDWD---VMQLATHM 293 Query: 322 NDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTIGTASPA--TATPSKP- 376 ++ +F T+PV D + G++V +DP ++ + +G +P A SKP Sbjct: 294 QNLAGGNVKFNTIPVTSIDGVGDYGESVVTVDPAEVRKYFTTLLGNEAPVKQPAPTSKPQ 353 Query: 377 ----NPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADT 432 NP V V+NA +TGLA V + LKK GY + + G + + AD Sbjct: 354 EKPVNPEKQVLVLNASTVTGLAGNVAEALKKMGYQVSETGNAPEGLYNQSQVMAANAADP 413 Query: 433 DAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADE-----DSTMDETITSQKVG 486 DA +A L P A P L + + VI +Y+ P ++ TSQ VG Sbjct: 414 DAHALAERLG-GLPVVASPSLDNTTLTVITGPDYNGPTGNAGDAGNNNSTPATTSQVVG 471 >tr|C3JG80|C3JG80_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, LytR family;[Rhodococcus erythropolis SK121] Length = 510 Score = 260 bits (664), Expect = 3e-67 Identities = 172/476 (36%), Positives = 261/476 (54%), Gaps = 20/476 (4%) Query: 7 PRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPR 66 P+ R R P R + + R + + S + +L+TG + + + L + Sbjct: 6 PQRRARPRPAPIRTKTSPARIAVAVLSVLVLLVTGFAWRGVDSLRNSLATASGLGLGGGK 65 Query: 67 STDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAV 125 D I+IL++G DSR D GN L S L L AG+ + NT+T+IL+ V D + A Sbjct: 66 --DGAIDILMVGTDSRTDAHGNPLSQSELDSLRAGE--EVASNTDTIILIRVPNDGSSAT 121 Query: 126 AFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAA 185 A SIPRD +V +VPG KI A+G TK+ KL++ G +D + + + EAGR A Sbjct: 122 AISIPRDAYV---NVPGIGMSKINAAFGATKETERLKLVNNGSSDS-DADKKSTEAGRTA 177 Query: 186 TLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDA 245 + V +LTG+++D++AEV L GF LT+ +GGV+VCLN V + SGA+F AG+Q LD Sbjct: 178 LIGAVANLTGITVDHYAEVGLLGFVLLTNAVGGVDVCLNAPVDEPMSGANFAAGKQTLDG 237 Query: 246 SEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVL 305 ++AL+FVRQRH L GDLDR RQQ F++S++ ++ T ++ KL L + ++ VV+ Sbjct: 238 ADALSFVRQRHDLPRGDLDRIVRQQVFMASLVSKVLSAKTLSDPGKLSQLTSAVQRSVVI 297 Query: 306 SAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTI 363 W D+I+ L N G + QF T+PV+ + + G+++ +DP A+K +A + Sbjct: 298 DDDW--DIIEFAKQLQNLAG-GKVQFETIPVLDINGMTDYGESIVKVDPKAVKKYIAGLV 354 Query: 364 GTAS----PATATPSKPNPSTV-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 G S + P+ N S++ VDV NA + GLAS V + L GY GQV ++G Sbjct: 355 GADSEDSDETSEAPTTVNASSITVDVANASDIAGLASGVSEALSALGYKQGQV-GNNTGS 413 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDS 474 T S + AD DA +AD L+SG +RV++ +YS P D+ Sbjct: 414 DVTESTVFAKSADDDAALAVAEALGGLTVKADSSLSSGKVRVVIAEDYSGPQSADA 469 >tr|C0ZWW9|C0ZWW9_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus erythropolis] Length = 510 Score = 258 bits (658), Expect = 2e-66 Identities = 171/476 (35%), Positives = 261/476 (54%), Gaps = 20/476 (4%) Query: 7 PRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPR 66 P+ R R P R + + R + + S + +L+TG + + + L + Sbjct: 6 PQRRARPRPAPIRTKTSPARIAVAVLSVLVLLVTGFAWRGVDSLRNSLATASGLGLGGGK 65 Query: 67 STDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAV 125 D I+IL++G DSR D GN L S L L AG+ + NT+T+IL+ V D + A Sbjct: 66 --DGAIDILMVGTDSRTDAHGNPLSQSELDSLRAGE--EVASNTDTIILIRVPNDGSSAT 121 Query: 126 AFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAA 185 A SIPRD +V +VPG KI A+G TK+ KL++ G +D + + + EAGR A Sbjct: 122 AISIPRDAYV---NVPGIGMSKINAAFGATKETERLKLVNNGSSDS-DADKKSTEAGRTA 177 Query: 186 TLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDA 245 + V +LTG+++D++AEV L GF LT+ +GGV+VCLN V + SGA+F AG+Q LD Sbjct: 178 LIGAVGNLTGITVDHYAEVGLLGFVLLTNAVGGVDVCLNAPVDEPMSGANFAAGKQTLDG 237 Query: 246 SEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVL 305 ++AL+FVRQRH L GDLDR RQQ F++S++ ++ T ++ KL L + ++ VV+ Sbjct: 238 ADALSFVRQRHDLPRGDLDRIVRQQVFMASLVSKVLSAKTLSDPGKLSQLTSAVQRSVVI 297 Query: 306 SAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTI 363 W D+I+ L N G + QF T+PV+ + + G+++ +DP A+K +A + Sbjct: 298 DDDW--DIIEFAKQLQNLAG-GKVQFETIPVLDINGMTDYGESIVKVDPKAVKKYIAGLV 354 Query: 364 GTAS----PATATPSKPNPSTV-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGE 418 G S + P+ N S++ VDV NA + GLAS V + L GY GQV ++G Sbjct: 355 GADSEDSEETSEAPTTVNASSITVDVANASDVAGLASGVSEALSALGYKQGQV-GNNTGS 413 Query: 419 PTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDS 474 + S + AD DA +AD L+SG +RV++ +YS P D+ Sbjct: 414 DVSESTVFAKSADDDAALAVAEALGGLTVKADSSLSSGKVRVVIAEDYSGPQSADA 469 >tr|C0E111|C0E111_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 489 Score = 257 bits (657), Expect = 2e-66 Identities = 166/472 (35%), Positives = 251/472 (53%), Gaps = 27/472 (5%) Query: 33 SFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTD---NNINILLIGLDSRKDQQGND 89 S + ++++G GY+ R +I + +L TD I+IL++G DSR D QGN Sbjct: 2 SALVLVVSGVGYFAIGRVQSNIASAGSLDLGAAGLTDALDGAIDILMVGNDSRSDAQGNP 61 Query: 90 LPWSILKQLHAGDSNDGGYNTNTLILVHVGADNK-AVAFSIPRDDWVPFSDVPGYNHIKI 148 L ++ LHAGD NT+T++++ + D K A A SIPRD ++ +V G + KI Sbjct: 62 LTPQEIELLHAGDEEAD--NTDTIMVIRIPNDGKSATAISIPRDTYI-HDEVAG--NTKI 116 Query: 149 KEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAEVNLAG 208 Y K ++L+ G D ELE + ++AGR ++ + L+G+++D++AEV L G Sbjct: 117 NGVYSAYKAEEKERLLQSGQQDGPELEEKAKDAGRKGLIKAIHELSGITVDHYAEVGLLG 176 Query: 209 FYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDLDRTHR 268 F LT +GGVEVCL A D +SGA+FPAG+Q L + LAFVRQRHGL GDLDR R Sbjct: 177 FVLLTDAVGGVEVCLKEATKDEFSGANFPAGKQTLTGATGLAFVRQRHGLPRGDLDRIVR 236 Query: 269 QQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLANDVGENR 328 QQA+++S++ ++ TGT T+ KL SL + + V + W+ + +L T ++ Sbjct: 237 QQAYMASLVSKVLSTGTLTSPAKLASLGSAVTRSVTIDKDWD---VMQLATHMQNLAGGN 293 Query: 329 TQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTIGTASPA--TATPSKP-----NPS 379 +F T+PV D + G++V +DP ++ + +G +PA A SKP NP Sbjct: 294 VKFNTIPVTSIDGVGDYGESVVTVDPAEVRKYFTTLLGNEAPAKQPAPTSKPQEKPVNPE 353 Query: 380 TVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADTDAQNVAT 439 V V+NA +TGLA V + LKK GY + + G + + AD DA +A Sbjct: 354 KQVLVLNASTVTGLAGNVAEALKKMGYQISETGNAPEGLYNQSQVMAANAADPDAHALAE 413 Query: 440 LLSIDAPNQADPKLASGHIRVIVDTNYSLPADE-----DSTMDETITSQKVG 486 L P A P L + + VI +Y+ P ++ TSQ VG Sbjct: 414 RLG-GLPVVASPSLDNTTLTVITGPDYNGPTGNAGDAGNNNSTPATTSQVVG 464 >tr|C1B1C0|C1B1C0_RHOOB Tax_Id=632772 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus opacus] Length = 510 Score = 257 bits (656), Expect = 3e-66 Identities = 171/462 (37%), Positives = 248/462 (53%), Gaps = 22/462 (4%) Query: 67 STDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAV 125 S D ++IL++G DSR D GN L L L AG+ + NT+T++LV V D + A Sbjct: 59 SADGAVDILMVGTDSRTDAHGNPLSQEELDSLRAGE--EVASNTDTIVLVRVPNDGSSAT 116 Query: 126 AFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAA 185 A SIPRD +V DVPG KI AYG TK+ KL++ G TD KE E + +AGR A Sbjct: 117 AISIPRDSYV---DVPGIGMSKINAAYGATKETERLKLVEDGATD-KEAEEESTKAGREA 172 Query: 186 TLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDA 245 ++ V LTG+++D++AEV L GF LT+ +GGV+VCLN V + SGA FPAG Q L Sbjct: 173 LIQSVADLTGITVDHYAEVGLLGFVLLTNAVGGVDVCLNEPVDEDMSGAHFPAGEQTLKG 232 Query: 246 SEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVL 305 ++AL+FVRQRH L GDLDR RQQ F++S++ ++ T ++ KL L ++ VVL Sbjct: 233 ADALSFVRQRHDLPRGDLDRIVRQQVFMASLVGKVLSAKTLSDPGKLNELSGAVQRSVVL 292 Query: 306 SAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTI 363 W D+I+ T D+ + QF T+PV + + G+++ + P +K VA + Sbjct: 293 DDDW--DIIE-FATQLQDLAGGKVQFETIPVADLNGMTDYGESIVEVKPKDVKKYVAGLV 349 Query: 364 G---TASPATATPSKP---NPSTV-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSS 416 G T S T T S+ + STV VDV NA + GLA+ V L GY G++ + + Sbjct: 350 GEGPTDSEDTTTKSETPDIDTSTVTVDVANASDVGGLANGVADALTSLGYGQGEIGNYTG 409 Query: 417 GEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTM 476 + T++ + D A++VA L P D L G +RV++ ++Y P ++T+ Sbjct: 410 KAVSETTVFAHSADDDSAKSVAAALG-GLPTDTDSALPRGSVRVVLASDYQGPTSAETTI 468 Query: 477 DETITSQKVGXXXXXXXXXXXXXXXDQGKPIDGG--GIPCVN 516 + + G PID G G CVN Sbjct: 469 SSSSSESSETGLEPVSTAGTTPTPAPPGPPIDAGSSGPRCVN 510 >tr|Q0S305|Q0S305_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator, LytR family protein;[Rhodococcus sp.] Length = 482 Score = 255 bits (652), Expect = 8e-66 Identities = 171/461 (37%), Positives = 245/461 (53%), Gaps = 21/461 (4%) Query: 67 STDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAV 125 S D ++IL++G DSR D GN L L L AG+ + NT+T++L+ V D + A Sbjct: 32 SADGAVDILMVGTDSRTDAHGNPLSQDELDSLRAGE--EVASNTDTIVLIRVPNDGSSAT 89 Query: 126 AFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAA 185 A SIPRD +V DVPG KI AYG TK+ +L++ G TD+ E E + +AGR A Sbjct: 90 AISIPRDSYV---DVPGIGMSKINAAYGATKETERLELVEDGATDE-EAEEESTKAGREA 145 Query: 186 TLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDA 245 ++ V LTGV++D++AEV L GF LT+ +GGV+VCLN V + SGA FPAG Q L Sbjct: 146 LIQSVADLTGVTVDHYAEVGLLGFVLLTNAVGGVDVCLNEPVDEDMSGAHFPAGEQTLKG 205 Query: 246 SEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVL 305 ++AL+FVRQRH L GDLDR RQQ F++S++ ++ T ++ KL L ++ VVL Sbjct: 206 ADALSFVRQRHDLPRGDLDRIVRQQVFMASLVGKVLSAKTLSDPGKLNELSGAVQRSVVL 265 Query: 306 SAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTI 363 W D+I+ T D+ + QF T+PV + + G+++ + P +K VA + Sbjct: 266 DDDW--DIIE-FATQLQDLAGGKVQFETIPVADLNGMTDYGESIVEVKPKDVKKYVAGLV 322 Query: 364 G---TASPATATPSKP--NPSTV-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSG 417 G T S T T P + STV VDV NA + GLA+ V L GY G+V + + Sbjct: 323 GEEPTDSEDTTTSETPKIDASTVTVDVANASDVGGLANGVADALTSLGYGQGEVGNYTGQ 382 Query: 418 EPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMD 477 + T++ + D A+ VA L P D L G +RV++ ++Y P ++T Sbjct: 383 SVSETTVFAHSADDDSAKAVAAALG-GLPTDTDATLPEGSVRVVLSSDYQGPTSAETTGT 441 Query: 478 ETITSQKVGXXXXXXXXXXXXXXXDQGKPIDGG--GIPCVN 516 T + G PID G G CVN Sbjct: 442 TTSSESSETGLEPASAAGTTPTPAPPGPPIDAGSSGPRCVN 482 >tr|Q5YQQ1|Q5YQQ1_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 495 Score = 253 bits (647), Expect = 3e-65 Identities = 161/405 (39%), Positives = 238/405 (58%), Gaps = 15/405 (3%) Query: 69 DNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAVAF 127 D ++ILL+G+DSR D G+ L LHAGD + G NT+T++LV V D + A A Sbjct: 65 DGAVDILLVGVDSRTDAHGDPLSEDEKAMLHAGD--EVGTNTDTIVLVRVPNDGSSATAI 122 Query: 128 SIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATL 187 S+PRD +V D+PG KI AYG+TK+ KL+DQGV++ E E + AGR A + Sbjct: 123 SLPRDSYV---DIPGLGKGKINSAYGVTKETERLKLLDQGVSEA-EAEKRSTRAGRQALI 178 Query: 188 RIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASE 247 + V LTG+++D++AEV+L GF LT +GGVEVCLN+ V + SGA FPAGRQRLD + Sbjct: 179 KTVADLTGITVDHYAEVSLLGFVLLTDAVGGVEVCLNNPVDEWMSGARFPAGRQRLDGPQ 238 Query: 248 ALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSA 307 AL+FVRQRH L GDLDR RQQ F++ ++ ++ T +N +KL L + VVL Sbjct: 239 ALSFVRQRHDLPRGDLDRIVRQQVFMAQLVNQVLSAKTLSNPNKLNELSDAVGRTVVLDE 298 Query: 308 GWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNI--NGQAVNIIDPVAIKAEVASTIGT 365 W D++ L L D+ + +F T+PV + + NG++V ++P +K+ VA +G Sbjct: 299 NW--DVLAFLQQL-RDLSGGQVKFETIPVADLNGMTSNGESVVRVEPKEVKSYVAGLVGE 355 Query: 366 ASPATATPSKPNPSTV-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSI 424 + +P + +PSTV VDV NA + GLA +V Q L G+ G+V + S T + + Sbjct: 356 DADEPQSP-RVDPSTVTVDVFNASSVGGLAGQVSQALAGKGFQPGRVGNYSGAGVTGSRV 414 Query: 425 QYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLP 469 ++ A+ VA L AD ++ + V++ ++YS P Sbjct: 415 LAADTSNPGAEAVAEALG-GLTVVADSSMSPDAVSVVLASDYSGP 458 >tr|A0QMX7|A0QMX7_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope-related transcriptional attenuator domain family protein;[Mycobacterium avium] Length = 516 Score = 251 bits (641), Expect = 2e-64 Identities = 175/467 (37%), Positives = 244/467 (52%), Gaps = 31/467 (6%) Query: 17 PSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILL 76 P R + R ++ S + +TG G+ H AL I +S AL + S +N NILL Sbjct: 9 PRRWVLLKGRLVASVASAFVMAVTGVGWTGYHTALGRIIISHALP-NGAMSLGDNQNILL 67 Query: 77 IGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVG-ADNKAVAFSIPRDDWV 135 +GLDSR DQ G LP I LHAGD + GGYN N LI+VH+ D A SIPRDD+ Sbjct: 68 MGLDSRLDQNGRPLPPEIYDALHAGDESSGGYNANVLIVVHLSDGDGPVTAVSIPRDDYA 127 Query: 136 PFSDVPGYNHI-KIKEAYGLTKQYVTQKLIDQ-------GVTDQKELETQGREAGRAATL 187 PG KIK+AYGL Q Q L Q G TD E REAGR A + Sbjct: 128 ELPGCPGSVCAGKIKQAYGLAYQ---QSLNAQAAGNSGAGATDLAAREQTAREAGRKAEI 184 Query: 188 RIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASE 247 V G+S+D+F EV L F+ + + + VCL DSYSGADF G QR+DA+E Sbjct: 185 GAVTDFLGISVDHFVEVTLGAFFQIAKAVEPITVCLAGDTRDSYSGADFHQGVQRIDAAE 244 Query: 248 ALAFVRQRHGLDNG---DLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVV 304 A+AFVRQR ++G D DRT RQQAF+ S++ G +++ LR L+ VAR +V Sbjct: 245 AMAFVRQRRDENDGSFTDFDRTRRQQAFLVSLVEAARSGGALSSVSGLRKLLQVARDNVA 304 Query: 305 LSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRY-DNINGQAVNIIDPVAIK------- 356 + AG DL+Q A+ + TLP+ + + NG +N++D AI+ Sbjct: 305 VDAGL--DLMQ-FAARASQLAGRPLSLYTLPISGFGKDPNGSDINLVDLPAIRRIVNERF 361 Query: 357 -AEVASTIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRS 415 ++ + + A P + P+ P V+DV+NA GLA+ V + L G+T G Sbjct: 362 MSDAPAALDAAVPGSQPPAAPAEPAVLDVVNATTHDGLAAAVEEALAGRGFTRGSATTAP 421 Query: 416 SGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIV 462 + + +SI+YG GA+ A+ +A L + P A +A G +R+ V Sbjct: 422 T-QAEDSSIEYGPGAEAAARLLADQLHL--PATAQSAVAPGTVRLTV 465 >tr|Q73U03|Q73U03_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 516 Score = 250 bits (638), Expect = 4e-64 Identities = 174/471 (36%), Positives = 244/471 (51%), Gaps = 31/471 (6%) Query: 17 PSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILL 76 P R + R ++ S + +TG G+ H AL I +S AL + S +N NILL Sbjct: 9 PRRWVLLKGRLVASVASAFVMAVTGVGWTGYHTALGRIIISHALP-NGAMSLGDNQNILL 67 Query: 77 IGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVG-ADNKAVAFSIPRDDWV 135 +GLDSR DQ G LP I LHAGD + GGYN N LI+VH+ D A SIPRDD+ Sbjct: 68 MGLDSRLDQNGRPLPPEIYDALHAGDESSGGYNANVLIIVHLSDGDGPVTAVSIPRDDYA 127 Query: 136 PFSDVPGYNHI-KIKEAYGLTKQYVTQKLIDQ-------GVTDQKELETQGREAGRAATL 187 PG KIK+AYGL Q Q L Q G TD E REAGR A + Sbjct: 128 ELPGCPGSVCAGKIKQAYGLAYQ---QSLNAQAAGNSGAGATDLAAREQTAREAGRKAEI 184 Query: 188 RIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASE 247 V G+S+D+F EV L F+ + + + VCL DSYSGADF G QR+DA+E Sbjct: 185 GAVTDFLGISVDHFVEVTLGAFFQIAKAVEPITVCLAGDTRDSYSGADFHQGVQRIDAAE 244 Query: 248 ALAFVRQRHGLDNG---DLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVV 304 A+AFVRQR ++G D DRT RQQAF+ S++ G +++ LR L+ VAR +V Sbjct: 245 AMAFVRQRRDENDGSFTDFDRTRRQQAFLVSLVEAARSGGALSSVSGLRKLLQVARDNVA 304 Query: 305 LSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRY-DNINGQAVNIIDPVAIK------- 356 + AG DL+Q A+ + TLP+ + + NG +N++D I+ Sbjct: 305 VDAGL--DLMQ-FAARASQLAGRPLSLYTLPISGFGKDPNGSDINLVDLPTIRRIVNERF 361 Query: 357 -AEVASTIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRS 415 ++ + + A P + P P V+DV+NA GLA+ + + L G+T G Sbjct: 362 MSDAPAALDAAVPGSQPPPAPAEPAVLDVVNATTHDGLAAALEEALAGRGFTRGSATTAP 421 Query: 416 SGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNY 466 + + +SI+YG GA+ A+ +A L + P A +A G +R+ V T + Sbjct: 422 T-QAEDSSIEYGPGAEAAARLLADQLHL--PATAQSAVAPGTVRLTVGTAF 469 >tr|C2ARH9|C2ARH9_TSUPA Tax_Id=521096 SubName: Full=Cell envelope-related function transcriptional attenuator common domain;[Tsukamurella paurometabola DSM 20162] Length = 542 Score = 249 bits (637), Expect = 5e-64 Identities = 184/524 (35%), Positives = 263/524 (50%), Gaps = 38/524 (7%) Query: 18 SRIRIALT-RSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILL 76 +R RI T ++ + L + V ++ TG + ++ DI + L + +TD ILL Sbjct: 32 ARARIHRTGKTAIVLLAAVVLIATGVAWTQFYQLGGDIARTGGLDSQPDGATD----ILL 87 Query: 77 IGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNK-AVAFSIPRDDWV 135 +G DSR D +GN L L +L+AG +DG NT+T+IL+ + + K A A SIPRD +V Sbjct: 88 VGTDSRTDAKGNPLTEKELARLNAG-VDDGTLNTDTIILIRIPNNGKSATAISIPRDAYV 146 Query: 136 PFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTG 195 +P KI A+ KL+ +G +++ ++ G E GR A V +LTG Sbjct: 147 A---IPDQGKGKINSAFAGAANVTRDKLLTEGKSEKDAIQA-GNEEGRKALRETVANLTG 202 Query: 196 VSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQR 255 VS+D +AE+ L GF LT +GGVEVCL V DSYSGA F AGRQ L +AL+FVRQR Sbjct: 203 VSVDNYAEIGLVGFSRLTDAVGGVEVCLKRPVNDSYSGARFRAGRQTLKGPQALSFVRQR 262 Query: 256 HGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQ 315 HGL GDLDR RQQ F++S+ ++ GT TN K+ L V L A W D++ Sbjct: 263 HGLPRGDLDRITRQQVFMASLANKILSAGTLTNPSKVNQLQNAVTTSVTLDANW--DVMN 320 Query: 316 RLGTLANDVGENRTQFRTLPVVRYDNING---QAVNIIDPVAIKAEVASTIG-------- 364 LAN + +F T+PVVR D + Q+V ++DP ++A V S +G Sbjct: 321 FAKELAN-LSAGSVKFATVPVVRDDGWSDDGQQSVVVVDPKQVQAYVRSLLGDKPGATSA 379 Query: 365 --TASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTT- 421 T S A A PS +T VDV+N G GLAS V L + G + S+ E + Sbjct: 380 KPTTSSAPAVPSVNRAATTVDVVNGGSTPGLASSVSSFLTGEKFQQGTTGNASNSESSAS 439 Query: 422 --TSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLP---ADEDSTM 476 +++ + D A+ VA LL P A + G ++V++ Y P +D + T Sbjct: 440 GKSAVLASSANDQPAKAVAALLG-GLPVIASSSVQQGRVKVLLKDGYKGPGSSSDTEGTA 498 Query: 477 DETITSQKVGXXXXXXXXXXXXXXXDQGKP----IDGGGIPCVN 516 T TS G +P GG+PCV+ Sbjct: 499 ASTTTSIPPGMTEAMDPSEAARVSSLLNRPGYTASQDGGVPCVD 542 >tr|Q8FRK7|Q8FRK7_COREF Tax_Id=152794 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens] Length = 524 Score = 248 bits (632), Expect = 2e-63 Identities = 177/494 (35%), Positives = 262/494 (53%), Gaps = 33/494 (6%) Query: 13 AIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTD------DPR 66 A+ + + RS + S + +L++G GY+ A ++ D+ + LT D + Sbjct: 17 AVQSTKQAGPVVVRSVVAFLSVLVLLISGLGYF-AVGSIGDVANAGNLTLGGGAGVRDGQ 75 Query: 67 STDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAV 125 S D +ILL+G DSR D QGN L L L AGD + NT+T++++ V D + A Sbjct: 76 SLDGATDILLVGSDSRSDAQGNTLSDEELAMLRAGDEEND--NTDTIMVIRVPNDGSSAS 133 Query: 126 AFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAA 185 A SIPRD ++ + Y ++KI YG K +L++QG T++ ELE++ +EAGR Sbjct: 134 AVSIPRDTYIHDDE---YGNMKINGVYGAYKDARHTELVEQGFTNESELESRSKEAGREG 190 Query: 186 TLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDA 245 + V +LTG+++D++AE+ L GF LT +GGVEVCLN V + SGADF AGRQ L Sbjct: 191 LIDAVSNLTGITVDHYAEIGLLGFVLLTDAVGGVEVCLNEPVNEPLSGADFDAGRQTLGG 250 Query: 246 SEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVL 305 S+AL+FVRQRHGL GDLDR RQQAF++S++ ++ +GT TN KL +L + V++ Sbjct: 251 SDALSFVRQRHGLPRGDLDRIVRQQAFMASLVNQILSSGTLTNPGKLSALADAVMRSVII 310 Query: 306 SAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKA------ 357 GW D++ L N G N T F T+PV D + G++V +D + A Sbjct: 311 DEGW--DVMGFATQLQNLAGGNVT-FTTIPVTSIDGVGDYGESVVTVDLDQVHAFFEDAL 367 Query: 358 -----EVASTIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVR 412 E ++ G AS + N T+V V+NA GLA V L+ GYT ++ Sbjct: 368 GGDEPEETTSDGDASGEATGEATANADTMVHVLNASGEAGLAGGVAGHLEGLGYTIEEIG 427 Query: 413 DRSSGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADE 472 + G + + D A+ +A L P A+ L + I VI +Y+ P E Sbjct: 428 NAIDGLYYESQVLAADPTDPQAEAIAAELG-GLPIVANASLDADTIIVISHIDYAGPTAE 486 Query: 473 DSTMDETITSQKVG 486 T+ E TS VG Sbjct: 487 --TVSEP-TSTPVG 497 >tr|C8NLU8|C8NLU8_COREF Tax_Id=196164 SubName: Full=LytR family transcriptional regulator;[Corynebacterium efficiens YS-314] Length = 524 Score = 248 bits (632), Expect = 2e-63 Identities = 177/494 (35%), Positives = 262/494 (53%), Gaps = 33/494 (6%) Query: 13 AIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTD------DPR 66 A+ + + RS + S + +L++G GY+ A ++ D+ + LT D + Sbjct: 17 AVQSTKQAGPVVVRSVVAFLSVLVLLISGLGYF-AVGSIGDVANAGNLTLGGGAGVRDGQ 75 Query: 67 STDNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAV 125 S D +ILL+G DSR D QGN L L L AGD + NT+T++++ V D + A Sbjct: 76 SLDGATDILLVGSDSRSDAQGNTLSDEELAMLRAGDEEND--NTDTIMVIRVPNDGSSAS 133 Query: 126 AFSIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAA 185 A SIPRD ++ + Y ++KI YG K +L++QG T++ ELE++ +EAGR Sbjct: 134 AVSIPRDTYIHDDE---YGNMKINGVYGAYKDARHTELVEQGFTNESELESRSKEAGREG 190 Query: 186 TLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDA 245 + V +LTG+++D++AE+ L GF LT +GGVEVCLN V + SGADF AGRQ L Sbjct: 191 LIDAVSNLTGITVDHYAEIGLLGFVLLTDAVGGVEVCLNEPVNEPLSGADFDAGRQTLGG 250 Query: 246 SEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVL 305 S+AL+FVRQRHGL GDLDR RQQAF++S++ ++ +GT TN KL +L + V++ Sbjct: 251 SDALSFVRQRHGLPRGDLDRIVRQQAFMASLVNQILSSGTLTNPGKLSALADAVMRSVII 310 Query: 306 SAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKA------ 357 GW D++ L N G N T F T+PV D + G++V +D + A Sbjct: 311 DEGW--DVMGFATQLQNLAGGNVT-FTTIPVTSIDGVGDYGESVVTVDLDQVHAFFEDAL 367 Query: 358 -----EVASTIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVR 412 E ++ G AS + N T+V V+NA GLA V L+ GYT ++ Sbjct: 368 GGDEPEETTSDGDASGEATGEATANADTMVHVLNASGEAGLAGGVAGHLEGLGYTIEEIG 427 Query: 413 DRSSGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADE 472 + G + + D A+ +A L P A+ L + I VI +Y+ P E Sbjct: 428 NAIDGLYYESQVLAADPTDPQAEAIAAELG-GLPIVANASLDADTIIVISHIDYAGPTAE 486 Query: 473 DSTMDETITSQKVG 486 T+ E TS VG Sbjct: 487 --TVSEP-TSTPVG 497 >tr|C6WJ74|C6WJ74_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator;[Actinosynnema mirum] Length = 517 Score = 246 bits (627), Expect = 7e-63 Identities = 176/523 (33%), Positives = 265/523 (50%), Gaps = 46/523 (8%) Query: 19 RIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVS----QALTTDDPRST----DN 70 R+ + R+ + L S +++T G+ + +T + +A +T P ST D Sbjct: 16 RVLVGTGRTLVALVSAAVLVVTWYGWHQLRTLNQGVTTTDVFGEASSTVSPESTRKPLDG 75 Query: 71 NINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADN-KAVAFSI 129 I+ILL+G DSR D QG L +L L+ G ++G NT+T+ILVHV D +AVA S Sbjct: 76 AIDILLVGSDSRTDAQGKPLSDEVLALLNGG-VDEGTLNTDTIILVHVPQDGTRAVAISF 134 Query: 130 PRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRI 189 PRD +V +D G+ KI A K + +L +G TD ++E + AGR ++ Sbjct: 135 PRDAYVEIAD--GFGKHKINSALIRQKNTTSAELQAKGETDLAKIELESTLAGRRTLIKT 192 Query: 190 VRSLTG--VSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSY-SGADFPAGRQRLDAS 246 + L+G + ID +AEVNLA FY++T +GGVEVCLN+ V D Y SGA FPAG Q L+ Sbjct: 193 IEDLSGGAIKIDRYAEVNLASFYEVTQAIGGVEVCLNNPVDDEYYSGAKFPAGVQTLEGR 252 Query: 247 EALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLS 306 +AL FVRQRH L NGDLDR RQQ FI ++ R++ TGT T+ +L L+ +K VVLS Sbjct: 253 QALQFVRQRHELPNGDLDRIVRQQVFIGALARKVLSTGTLTDPARLSGLVGAVQKSVVLS 312 Query: 307 AGWNEDLIQRLGTLANDVGENRTQFRTLPV-VRYDNINGQAVNIIDPVAIKAEV------ 359 GW+ I + + + +FRT+PV D + V +D +KA + Sbjct: 313 QGWD---ITEFASQMQGLASGKLEFRTIPVGPPTDTYSDGNVLPVDAAEVKAFLGDLASD 369 Query: 360 -----ASTIGTASPATATPSKPNPSTV-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRD 413 S G+ S + + + P PS + V V N+ ++G+A +V L G+ GQ Sbjct: 370 KPKPSTSPSGSPSGSPSPSAGPQPSAITVQVYNSSGVSGVALKVLNALGDQGFRKGQA-- 427 Query: 414 RSSGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADED 473 +S TT ++YG G + A V L +A + D + G + + V + + E Sbjct: 428 LNSAVSDTTVVRYGTGQEAYADRVVQALGGNATTELDDSVPRGQVLIYVGADNA----EL 483 Query: 474 STMDETITSQKVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 T D+T +++ PI G+ CV+ Sbjct: 484 GTTDDTSSARS---------ETGSSSPASSAAPITANGVVCVD 517 >tr|Q6NIT6|Q6NIT6_CORDI Tax_Id=1717 SubName: Full=Putative uncharacterized protein;[Corynebacterium diphtheriae] Length = 492 Score = 245 bits (626), Expect = 9e-63 Identities = 176/513 (34%), Positives = 262/513 (51%), Gaps = 48/513 (9%) Query: 29 MTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPR----STDNNINILLIGLDSRKD 84 ++L S + ++++ AGY+ R + + L + + D +ILL+G DSR D Sbjct: 3 LSLLSALVLIVSAAGYFTVGRIGNTVASAGNLVLGGDKGMKEAADGATDILLVGSDSRTD 62 Query: 85 QQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAVAFSIPRDDWVPFSDVPGY 143 QGN L ++ LHAGD + NT+TL+++ V D + A A SIPRD +V +V Sbjct: 63 AQGNPLTPEEIELLHAGDEEND--NTDTLMVIRVPNDGSSATAISIPRDTYVHDENV--- 117 Query: 144 NHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAE 203 ++KI Y K +L++ G +DQK ++ +EAGR A + + LTGV++D++AE Sbjct: 118 GNLKINGVYRAYKNRKASELVNSGESDQKHIDELSKEAGRKALISSISDLTGVTVDHYAE 177 Query: 204 VNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDL 263 V L GF LT+ +GGV+VCLN+ VYD +SGADF AG+Q L +ALAFVRQRHGL GDL Sbjct: 178 VGLLGFVLLTNAVGGVDVCLNNDVYDEFSGADFKAGQQTLRDGQALAFVRQRHGLPRGDL 237 Query: 264 DRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLAND 323 DR RQQAF++S++ ++ +GT TN KL L + VV+ W D++ L N Sbjct: 238 DRIVRQQAFMASLVAKVLSSGTLTNPSKLSDLGEAVSRSVVIDKNW--DVMSFANQLQNL 295 Query: 324 VGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAI-----------KAEVASTIGTASPAT 370 G N +F T+PV D + G++V +D + E T + +PA Sbjct: 296 AGGN-VKFNTIPVTSIDGVGDYGESVVTVDKNQVHQFFDRLLNGNNGEETPTSDSEAPA- 353 Query: 371 ATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGA 430 P+ ST +DV+NA TGLAS+V L YT G + + G + I A Sbjct: 354 ---ENPHTSTTIDVLNATSTTGLASQVAGHLSAKHYTIGNIGNALEGMYHESQI---VAA 407 Query: 431 DTDAQNVATL------LSIDAPNQADPKLASGHIRVIVDTNYSLP-ADEDSTMDETITSQ 483 D + + V + L I N D + + V++ ++YS P D + D + ++ Sbjct: 408 DPNNEAVKAIAAELGGLPITQRNDLD----ADSVVVVIASDYSGPTGDGAESSDSSSSTT 463 Query: 484 KVGXXXXXXXXXXXXXXXDQGKPIDGGGIPCVN 516 VG D G G G CVN Sbjct: 464 TVGKPGSDEGEAIVSPEIDAG----GQGPRCVN 492 >tr|B2HEM5|B2HEM5_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 485 Score = 245 bits (626), Expect = 9e-63 Identities = 168/452 (37%), Positives = 235/452 (51%), Gaps = 18/452 (3%) Query: 24 LTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILLIGLDSRK 83 + R+ T + V VL TG W R+ E + + + D I+ILL+GLDSR Sbjct: 6 VVRAVATALAVVVVLGTGLA-WTNVRSFEGGIFHMSAPSLGHGADDGAIDILLVGLDSRT 64 Query: 84 DQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNK-AVAFSIPRDDWVPFSDVPG 142 D GN L L L AGD NT+T+ILV + + + A A SIPRD +V PG Sbjct: 65 DAHGNPLTPEELATLRAGDEE--ATNTDTIILVRIPNNGRSATAISIPRDSYV---QAPG 119 Query: 143 YNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFA 202 KI YG T++ L+ G + E G EAGR A ++ V LTGV++D++A Sbjct: 120 LGKTKINGVYGQTRETKRAGLVQAGAS-AAEAAAAGTEAGREALIKTVADLTGVTVDHYA 178 Query: 203 EVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGD 262 E+ L GF +T LGGV+VCLN VY+ SGADFPAGRQ+L +ALAFVRQRH L GD Sbjct: 179 EIGLLGFALITDALGGVDVCLNGPVYEPLSGADFPAGRQKLTGPQALAFVRQRHELPRGD 238 Query: 263 LDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWN-EDLIQRLGTLA 321 LDR RQQA ++S+ + T ++ +R L ++ VVLS+GWN D +Q+L L Sbjct: 239 LDRVVRQQAVMASLAHRVISGKTLSSPTTVRRLEQAVQRSVVLSSGWNIIDFVQQLQQLT 298 Query: 322 NDVGENRTQFRTLPVV---RYDNINGQAVNIIDPVAIKAEVASTIGTASPA-TATPSKPN 377 F T+PV+ + + Q+V +DP + V S + + TA + Sbjct: 299 G----GNVAFATIPVLDGSGWSDDGMQSVVRVDPHQVADWVGSLLNEQNEGKTAELAYAP 354 Query: 378 PSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADTDAQNV 437 T DV+N + GLA+ V L G+T G V + +G + ++ D AQ V Sbjct: 355 AKTTADVVNDTDINGLAAAVSDVLSAKGFTTGSVGNNEAGHVKLSQVRAATTDDLGAQQV 414 Query: 438 ATLLSIDAPNQADPKLASGHIRVIVDTNYSLP 469 A L P AD + SG +RV++ +YS P Sbjct: 415 AKELG-GLPVVADTSIPSGSVRVVLSNDYSGP 445 >tr|A4QC74|A4QC74_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 519 Score = 245 bits (625), Expect = 1e-62 Identities = 171/506 (33%), Positives = 253/506 (50%), Gaps = 31/506 (6%) Query: 26 RSFMTLTSFVAVLLTGAGYWVAHR----ALEDITVSQALTTDDPRSTDNNINILLIGLDS 81 RS + S + +L++G GY + A ++ + D + D +ILL+G DS Sbjct: 30 RSVVAFVSVLVLLVSGLGYLAVGKVDGVASGNLNLGGGRGIQDGNAADGATDILLVGSDS 89 Query: 82 RKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAVAFSIPRDDWVPFSDV 140 R D QGN L L L AGD + NT+T++++ V D + A A SIPRD ++ D Sbjct: 90 RSDAQGNTLTEEELAMLRAGDEEND--NTDTIMVIRVPNDGSSATAVSIPRDTYIHDDD- 146 Query: 141 PGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDY 200 Y ++KI YG K +L++QG T++ ELET+ ++AGR + V LTG+++D+ Sbjct: 147 --YGNMKINGVYGAYKDARRAELMEQGFTNESELETRAKDAGREGLIDAVSDLTGITVDH 204 Query: 201 FAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDN 260 +AEV L GF LT +GGVEVCLN+AV + SGA+FPAGRQ L S+AL++VRQRH L Sbjct: 205 YAEVGLLGFVLLTDAVGGVEVCLNNAVDEPLSGANFPAGRQTLGGSDALSYVRQRHDLPR 264 Query: 261 GDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTL 320 GDLDR RQQ++++S++ ++ +GT TN KL +L + VV+ GW I T Sbjct: 265 GDLDRIVRQQSYMASLVNQVLSSGTLTNPAKLSALADAVTRSVVIDEGWE---IMSFATQ 321 Query: 321 ANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTIGTASPATATPSKPNP 378 ++ F T+PV D G++V ID + A +G PA S P Sbjct: 322 LQNLAGGNVTFGTIPVTSIDGTGDYGESVVTIDVNQVHAFFQEALGETEPAPEDGSADQP 381 Query: 379 S--------TVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGA 430 + V V+NA GLA+ + L++ GYT + + + G + I A A Sbjct: 382 ADQAPDLSEVEVHVLNASYTEGLANGIAAHLQEMGYTISETGNAAEGLYYESQI-LAAEA 440 Query: 431 DTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKVGXXXX 490 D + + P A+ L + V+ +Y+ P E + + ITS VG Sbjct: 441 DNEKALAISEALGGLPIVANSSLDDNTVIVVSAGDYAGPTAEANAV---ITSSTVGQPGA 497 Query: 491 XXXXXXXXXXXDQGKPIDGGGIPCVN 516 D G G G CVN Sbjct: 498 DVGAPIESPEFDAG----GDGPRCVN 519 >tr|C2GH00|C2GH00_9CORY Tax_Id=548478 SubName: Full=Transcriptional regulator;[Corynebacterium glucuronolyticum ATCC 51866] Length = 491 Score = 245 bits (625), Expect = 1e-62 Identities = 163/467 (34%), Positives = 247/467 (52%), Gaps = 22/467 (4%) Query: 33 SFVAVLLTGAGYWVAHRALEDITVSQALTTDDPR------STDNNINILLIGLDSRKDQQ 86 S +A+ +G GY R ++T + L + D +ILL+G DSR D Q Sbjct: 9 SALALAFSGLGYASVGRIGAEVTGTGNLELGGGGGIKHGDAKDGATDILLVGSDSRSDAQ 68 Query: 87 GNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAVAFSIPRDDWVPFSDVPGYNH 145 GN L + LHAGD + NT+T++L+ V D + A A S+PRD ++ P + + Sbjct: 69 GNRLTPEEIDMLHAGDEEND--NTDTIMLIRVPNDGSSATAISLPRDTYI---HDPEHGN 123 Query: 146 IKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAEVN 205 +KI Y K +L +G TD+ +E++G++AGR ++ V +LTG+++D++AE+ Sbjct: 124 MKINGVYKAHKDEREMELRGEGRTDETYIESEGKDAGRRGLIQAVSNLTGITVDHYAEIG 183 Query: 206 LAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDLDR 265 L GF T +GGV+VCLN A YD YSGADF AG Q L +ALAFVRQRHGL GDLDR Sbjct: 184 LLGFVLFTDAVGGVDVCLNEATYDEYSGADFTAGYQTLGGPQALAFVRQRHGLPRGDLDR 243 Query: 266 THRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLANDVG 325 RQQAF++S+++++ + T TN KL L AR+ V++ W D+I L N G Sbjct: 244 IVRQQAFMASLVQKVLSSNTLTNPSKLTELAEAARRSVIIDKDW--DIISFATQLQNLAG 301 Query: 326 ENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTIGT---ASPATATPSKPNPST 380 N +F T+PV D + G+++ +DP +K S +GT +P + P S Sbjct: 302 GN-VRFDTIPVTSVDGVGDYGESIITVDPDEVKRFFESLLGTKDNPNPHAGENAAPVTSD 360 Query: 381 V-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADTDAQNVAT 439 V V V+NA ++ GLA V L+ Y V + G T+ + D A+ +A Sbjct: 361 VNVTVLNASQVAGLAGAVGGWLRDENYHVTTVTNAQEGLYFTSQVVAPTADDPAAKEIAE 420 Query: 440 LLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKVG 486 L + P P L +G + V+ +Y P ++ ++ + VG Sbjct: 421 KLG-NLPITTSPTLDAGSVVVVTAGDYVGPQSTNAFEEQDTGTDVVG 466 >tr|C0VQM3|C0VQM3_9CORY Tax_Id=548477 SubName: Full=Transcriptional regulator;[Corynebacterium glucuronolyticum ATCC 51867] Length = 491 Score = 245 bits (625), Expect = 1e-62 Identities = 163/467 (34%), Positives = 247/467 (52%), Gaps = 22/467 (4%) Query: 33 SFVAVLLTGAGYWVAHRALEDITVSQALTTDDPR------STDNNINILLIGLDSRKDQQ 86 S +A+ +G GY R ++T + L + D +ILL+G DSR D Q Sbjct: 9 SALALTFSGLGYASVGRIGAEVTGTGNLELGGGGGIKHGDAKDGATDILLVGSDSRSDAQ 68 Query: 87 GNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAVAFSIPRDDWVPFSDVPGYNH 145 GN L + LHAGD + NT+T++L+ V D + A A S+PRD ++ P + + Sbjct: 69 GNRLTPEEIDMLHAGDEEND--NTDTIMLIRVPNDGSSATAISLPRDTYI---HDPEHGN 123 Query: 146 IKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAEVN 205 +KI Y K +L +G TD+ +E++G++AGR ++ V +LTG+++D++AE+ Sbjct: 124 MKINGVYKAHKDEREMELRGEGRTDETYIESEGKDAGRRGLIQAVSNLTGITVDHYAEIG 183 Query: 206 LAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGDLDR 265 L GF T +GGV+VCLN A YD YSGADF AG Q L +ALAFVRQRHGL GDLDR Sbjct: 184 LLGFVLFTDAVGGVDVCLNEATYDEYSGADFTAGYQTLGGPQALAFVRQRHGLPRGDLDR 243 Query: 266 THRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLANDVG 325 RQQAF++S+++++ + T TN KL L AR+ V++ W D+I L N G Sbjct: 244 IVRQQAFMASLVQKVLSSNTLTNPSKLTELAEAARRSVIIDKDW--DIISFATQLQNLAG 301 Query: 326 ENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTIGT---ASPATATPSKPNPST 380 N +F T+PV D + G+++ +DP +K S +GT +P + P S Sbjct: 302 GN-VRFDTIPVTSVDGVGDYGESIITVDPDEVKRFFESLLGTKDNPNPHAGENAAPVTSD 360 Query: 381 V-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADTDAQNVAT 439 V V V+NA ++ GLA V L+ Y V + G T+ + D A+ +A Sbjct: 361 VNVTVLNASQVAGLAGAVGGWLRDENYHVTTVTNAQEGLYFTSQVVAPTADDPAAKEIAE 420 Query: 440 LLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKVG 486 L + P P L +G + V+ +Y P ++ ++ + VG Sbjct: 421 KLG-NLPITTSPTLDAGSVVVVTAGDYVGPQSTNAFEEQDTGTDVVG 466 >tr|A0PRH5|A0PRH5_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 486 Score = 244 bits (623), Expect = 2e-62 Identities = 168/452 (37%), Positives = 235/452 (51%), Gaps = 18/452 (3%) Query: 24 LTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILLIGLDSRK 83 + R+ T + V VL TG W R+ E + + + D I+ILL+GLDSR Sbjct: 7 VVRAVATALAVVVVLGTGLA-WTNVRSFEGGIFHMSAPSLGHGADDGAIDILLVGLDSRT 65 Query: 84 DQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNK-AVAFSIPRDDWVPFSDVPG 142 D GN L L L AGD NT+T+ILV + + + A A SIPRD +V PG Sbjct: 66 DAHGNPLTPEELATLRAGDEE--ATNTDTIILVRIPNNGRSATAISIPRDSYV---QAPG 120 Query: 143 YNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDYFA 202 KI YG T++ L+ G + E G EAGR A ++ V LTGV++D++A Sbjct: 121 LGKTKINGVYGQTRETKRAGLVQAGAS-AAEAAAAGTEAGREALIKTVADLTGVTVDHYA 179 Query: 203 EVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDNGD 262 E+ L GF +T LGGV+VCLN VY+ SGADFPAGRQ+L +ALAFVRQRH L GD Sbjct: 180 EIGLLGFALITDALGGVDVCLNGPVYEPLSGADFPAGRQKLTGPQALAFVRQRHELPRGD 239 Query: 263 LDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWN-EDLIQRLGTLA 321 LDR RQQA ++S+ + T ++ +R L ++ VVLS+GWN D +Q+L L Sbjct: 240 LDRVVRQQAVMASLAHRVISGKTLSSPTTVRRLEQAVQRSVVLSSGWNIIDFVQQLQQLT 299 Query: 322 NDVGENRTQFRTLPVV---RYDNINGQAVNIIDPVAIKAEVASTIGTASPA-TATPSKPN 377 F T+PV+ + + Q+V +DP + V S + + TA + Sbjct: 300 G----GNVAFATIPVLDGSGWSDDGMQSVVRVDPHQVADWVGSLLNEQNEGKTAELAYAP 355 Query: 378 PSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGADTDAQNV 437 T DV+N + GLA+ V L G+T G V + +G + ++ D AQ V Sbjct: 356 AKTTADVVNDTDINGLAAAVSDVLSAKGFTTGSVGNNEAGHVKLSQVRAVTTDDLGAQQV 415 Query: 438 ATLLSIDAPNQADPKLASGHIRVIVDTNYSLP 469 A L P AD + SG +RV++ +YS P Sbjct: 416 AKELG-GLPVVADTSIPSGSVRVVLSNDYSGP 446 >tr|Q8NSD6|Q8NSD6_CORGL Tax_Id=1718 SubName: Full=Transcriptional regulator; SubName: Full=Putative transcriptional regulator;[Corynebacterium glutamicum] Length = 518 Score = 243 bits (619), Expect = 6e-62 Identities = 170/506 (33%), Positives = 255/506 (50%), Gaps = 32/506 (6%) Query: 26 RSFMTLTSFVAVLLTGAGYWVAHR----ALEDITVSQALTTDDPRSTDNNINILLIGLDS 81 RS + S + +L++G GY + A ++ + D + D +ILL+G DS Sbjct: 30 RSVVAFVSVLVLLVSGLGYLAVGKVDGVASGNLNLGGGRGIQDGNAADGATDILLVGSDS 89 Query: 82 RKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGAD-NKAVAFSIPRDDWVPFSDV 140 R D QGN L L L AGD + NT+T++++ V D + A A SIPRD ++ D Sbjct: 90 RSDAQGNTLTEEELAMLRAGDEEND--NTDTIMVIRVPNDGSSATAVSIPRDTYIHDDD- 146 Query: 141 PGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDY 200 Y ++KI YG K +L++QG T++ ELET+ ++AGR + V LTG+++D+ Sbjct: 147 --YGNMKINGVYGAYKDARRAELMEQGFTNESELETRAKDAGREGLIDAVSDLTGITVDH 204 Query: 201 FAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDN 260 +AEV L GF LT +GGVEVCLN+AV + SGA+FPAGRQ L S+AL++VRQRH L Sbjct: 205 YAEVGLLGFVLLTDAVGGVEVCLNNAVDEPLSGANFPAGRQTLGGSDALSYVRQRHDLPR 264 Query: 261 GDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTL 320 GDLDR RQQ++++S++ ++ +GT TN KL +L + VV+ GW I T Sbjct: 265 GDLDRIVRQQSYMASLVNQVLSSGTLTNPAKLSALADAVTRSVVIDEGWE---IMSFATQ 321 Query: 321 ANDVGENRTQFRTLPVVRYDNIN--GQAVNIIDPVAIKAEVASTIGTASPA-------TA 371 ++ F T+PV D G++V ID + A +G A PA + Sbjct: 322 LQNLAGGNVTFATIPVTSIDGTGDYGESVVTIDVNQVHAFFQEALGEAEPAPEDGSDDQS 381 Query: 372 TPSKPNPSTV-VDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGA 430 P+ S V V V+NA + GLA+ + L++ GY+ + + + G + I Sbjct: 382 ADQAPDLSEVEVHVLNASYVEGLANGIAAQLQELGYSIAETGNAAEGLYYESQILAAEED 441 Query: 431 DTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKVGXXXX 490 A ++ L P A+ L + V+ +Y+ P E + +TS VG Sbjct: 442 SAKALAISEALG-GLPIVANSSLDDNTVIVVSAGDYAGPTAEAN----AVTSSTVGQPGA 496 Query: 491 XXXXXXXXXXXDQGKPIDGGGIPCVN 516 D G G G CVN Sbjct: 497 DVGEPIESPEFDAG----GDGPRCVN 518 >tr|C7QEE1|C7QEE1_CATAD Tax_Id=479433 SubName: Full=Cell envelope-related transcriptional attenuator;[Catenulispora acidiphila] Length = 664 Score = 242 bits (617), Expect = 1e-61 Identities = 156/404 (38%), Positives = 215/404 (53%), Gaps = 43/404 (10%) Query: 7 PRHRHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVA-HRALEDITVSQALTTDDP 65 PR R R R + + T+ A++L A W H + S A+ ++ Sbjct: 58 PRRRRR--------RATIVARALACTTSAAIVLASAAIWAEYHNLTSGLLTSNAI--NEI 107 Query: 66 RS---------TDNNINILLIGLDSRKDQQGNDLPWSILKQ-LHAGDSNDGGYNTNTLIL 115 RS D ++N+LLIGLDSRKD GNDLP ++Q LHAG S GGYN N LI Sbjct: 108 RSGEKGYVAPHLDGSVNLLLIGLDSRKDMNGNDLPTDFVEQELHAGSSEIGGYNANVLIF 167 Query: 116 VHVGADN-KAVAFSIPRDDWVP-------FSDVPGYNHIKIKEAYGLTKQYVTQKLIDQG 167 +H+ AD + AFSI RDD+V D+P KIKEAYG K +L G Sbjct: 168 LHIPADGGRVTAFSIARDDYVEEPGGSSAVGDIPDLGMHKIKEAYGRAKAIAVDRLKASG 227 Query: 168 VTDQKELETQGREAGRAATLRIVRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAV 227 +TDQ ++E RE GR +T+R V+ LTG +D+ AE+NL GFYD+ +G +EVCLNH V Sbjct: 228 MTDQAQIEKVSREVGRESTIRAVQLLTGEHVDHLAEINLLGFYDVAQAVGPIEVCLNHPV 287 Query: 228 YD-----SYSGADFPAGRQRLDASEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGD 282 D + +G PAG LDA+ AL FVRQR L GD DR RQQAF+++VM +L Sbjct: 288 NDPIEDGAGTGLKLPAGHSMLDAATALQFVRQRFHLLRGDFDRNRRQQAFLAAVMHKLKS 347 Query: 283 TGTFTNLDKLRSLMAVARKDVVLSAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNI 342 G +L K+++L V +KDVV+ W D++ N G N FR LP+ + Sbjct: 348 EGVIGDLGKMQALFDVVKKDVVIDDSW--DVLDFADRAQNLTGGN-ADFRELPITGQPVL 404 Query: 343 NGQ-AVNIIDPVAIKAEVASTIGTASP-----ATATPSKPNPST 380 +VN ++P+ I+ V + G A A AT + +P++ Sbjct: 405 PADGSVNTVNPLQIRQIVMTGFGDAKEFATEMAQATENGGDPAS 448 Score = 46.2 bits (108), Expect = 0.010 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 5/118 (4%) Query: 352 PVAIKAEVASTIGTASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQV 411 P A E + +G PA PS + TVVD+ NA GLA+ V L G+ + Sbjct: 494 PAARGGESGAGLGMR-PAAIAPSDTH--TVVDLYNATARNGLATTVGDWLAASGWPVDKT 550 Query: 412 RDRSSGEPTTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLP 469 ++ TT I YG GA A +A L + A + A+GH+ + + +Y+ P Sbjct: 551 AGAAAQSRTT--ILYGKGAAKAAGQLAAALGVQALPAPSARTAAGHVLIRLGADYTPP 606 >tr|C7MUW6|C7MUW6_SACVD Tax_Id=471857 SubName: Full=Cell envelope-related function transcriptional attenuator common domain protein;[Saccharomonospora viridis] Length = 538 Score = 240 bits (613), Expect = 3e-61 Identities = 171/532 (32%), Positives = 259/532 (48%), Gaps = 38/532 (7%) Query: 14 IHKPSRIR-IALT--RSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDP--RST 68 I SR+R I L R+ ++L S V + LT G+ + A ++ + +P + Sbjct: 14 IRSKSRLRTIGLIGGRTLVSLLSVVVLALTAYGWQMIGTAQSNLATTDVFDDQEPGAKPL 73 Query: 69 DNNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADN-KAVAF 127 D +++ILL+G+DSR D QGN LP +L LHAG ++G T+T+ILVH+ D A A Sbjct: 74 DGSVDILLVGIDSRTDAQGNPLPQEVLDMLHAG-KDEGTKQTDTMILVHIPQDGTSATAI 132 Query: 128 SIPRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATL 187 S PRD WV + GY ++ A+ + L+ QG TD + +E Q GR + Sbjct: 133 SFPRDSWVELAG--GYGTNRLNTAFRFAYNHTRNTLLAQGETDTEAIEKQAEAEGRKNLI 190 Query: 188 RIVRSLTGVS--IDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDA 245 + L G ID +AEVNLA FY++T +GG+EVCL ++ SG + PAGRQ ++ Sbjct: 191 ATIEQLIGRPGMIDRYAEVNLASFYEITKAIGGIEVCLKQPAKEAKSGINLPAGRQTIEG 250 Query: 246 SEALAFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVL 305 +ALAFVRQR GL GDLDR +RQQAF+S + R++ N +L +++ +K VV+ Sbjct: 251 VQALAFVRQRTGLPRGDLDRINRQQAFLSGLARKMLSKEILLNPSRLSEVISAVQKSVVV 310 Query: 306 SAGWNEDLIQRLGTLANDVGENRTQFRTLPVVRYDNINGQAVNIIDPVAIKAEV-----A 360 S W DL++ + N G + +F T+PVV+ +NG +V +DP I+A + Sbjct: 311 SKDW--DLLEFAHQMRNLSG-GQIEFHTVPVVQDMYVNGASVLEVDPAQIRAFIDELVPR 367 Query: 361 STIGTASPATATPSKPNPST-VVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEP 419 T G + + P V + NA L L G+ G S Sbjct: 368 ETEGDPRMDSVPQTVPGAEAYTVHIYNATADPSLGEATRTLLASQGF--GGESYAQSDPQ 425 Query: 420 TTTSIQYGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLP----ADEDST 475 +T I + G + T L +D QADP+LA G + + + +++LP E T Sbjct: 426 NSTVIYHAPGEQAGVDALRTALGVDFAAQADPQLAPGTLNLYLGGDFTLPPTTQGAEGLT 485 Query: 476 MDETITSQKVG------XXXXXXXXXXXXXXXDQGK------PIDGGGIPCV 515 + + + VG D+G PI GG+PC+ Sbjct: 486 GVQPLRTGSVGYRAQQQSDTGQSAPESGEPGTDEGSEDAEDGPITAGGVPCI 537 >tr|Q7TWU9|Q7TWU9_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb3295;[Mycobacterium bovis] Length = 498 Score = 239 bits (611), Expect = 5e-61 Identities = 164/458 (35%), Positives = 236/458 (51%), Gaps = 26/458 (5%) Query: 22 IALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTDNNINILLIGLDS 81 + R+ T + VL TG W + R+ ED + + D I+ILL+GLDS Sbjct: 11 VRTARAISTALAVAIVLGTGVA-WSSVRSFEDGIFHMSAPSLGHGGDDGAIDILLVGLDS 69 Query: 82 RKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNK-AVAFSIPRDDWVPFSDV 140 R D GN L L LHAGD NT+T+IL+ V + K A A SIPRD +V Sbjct: 70 RTDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYVA---A 124 Query: 141 PGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSLTGVSIDY 200 PG KI YG T++ L+ G + E G EAGR A ++ V LTGV++D+ Sbjct: 125 PGLGKTKINGVYGQTRETKRAGLVQAGASPT-EAAAAGTEAGREALIKTVADLTGVTVDH 183 Query: 201 FAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEALAFVRQRHGLDN 260 +AE+ L GF + LGGV+VCL VY+ SGADFPAGRQ+L+ +AL+FVRQRH L Sbjct: 184 YAEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPR 243 Query: 261 GDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGWN-EDLIQRLGT 319 GDLDR RQQA ++++ + T ++ L+ L ++ VVLS+GW+ D +++L Sbjct: 244 GDLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQK 303 Query: 320 LANDVGENRTQFRTLPVV---RYDNINGQAVNIIDPVAIKAEVASTI-----GTASPATA 371 LA F T+PV+ + + Q+V +DP ++ V + G Sbjct: 304 LAG----GNVAFATIPVLDGAGWSDDGMQSVVRVDPRQVQDWVVGLLHEQDQGKTDELAY 359 Query: 372 TPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGAD 431 TP+K T +V+N + GLA+ V + L G+T G V + + ++ D Sbjct: 360 TPAK----TTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADD 415 Query: 432 TDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLP 469 AQ VA L P AD +A G +RV++ +YS P Sbjct: 416 LGAQQVAKELG-GLPVVADASIAPGSVRVVLANDYSGP 452 Database: Amellifera_nr Posted date: Jan 15, 2010 5:10 AM Number of letters in database: 3,808,957,724 Number of sequences in database: 11,153,314 Lambda K H 0.316 0.133 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11153314 Number of Hits to DB: 3,704,932,528 Number of extensions: 156265808 Number of successful extensions: 413180 Number of sequences better than 10.0: 2363 Number of HSP's gapped: 412603 Number of HSP's successfully gapped: 2384 Length of query: 516 Length of database: 3,808,957,724 Length adjustment: 142 Effective length of query: 374 Effective length of database: 2,225,187,136 Effective search space: 832219988864 Effective search space used: 832219988864 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 83 (36.6 bits)