BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_0001 (397 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P52851|DPO3B_MYCSM Tax_Id=1772 (dnaN)RecName: Full=DNA polyme... 763 0.0 tr|A0QND6|A0QND6_MYCS2 Tax_Id=246196 (dnaN)SubName: Full=DNA pol... 763 0.0 tr|A1T103|A1T103_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 687 0.0 tr|A3PSD8|A3PSD8_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 687 0.0 tr|Q1BG60|Q1BG60_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 686 0.0 tr|A1U8S1|A1U8S1_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 686 0.0 tr|A4T4T7|A4T4T7_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 680 0.0 sp|Q9L7L6|DPO3B_MYCPA Tax_Id=1770 (dnaN)RecName: Full=DNA polyme... 634 e-180 tr|D5P9Z6|D5P9Z6_9MYCO Tax_Id=525368 (dnaN)SubName: Full=DNA-dir... 627 e-177 tr|B2HI47|B2HI47_MYCMM Tax_Id=216594 (dnaN)SubName: Full=DNA pol... 616 e-174 tr|A0PKB3|A0PKB3_MYCUA Tax_Id=362242 (dnaN)SubName: Full=DNA pol... 612 e-173 tr|A0Q8R7|A0Q8R7_MYCA1 Tax_Id=243243 (dnaN)SubName: Full=DNA pol... 609 e-172 tr|B1MDH7|B1MDH7_MYCA9 Tax_Id=561007 (dnaN)SubName: Full=DNA pol... 605 e-171 sp|Q50790|DPO3B_MYCTU Tax_Id=1773 (dnaN)RecName: Full=DNA polyme... 601 e-170 tr|C6DQ77|C6DQ77_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 601 e-170 tr|A5WI56|A5WI56_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 601 e-170 tr|A5TY70|A5TY70_MYCTA Tax_Id=419947 (dnaN)SubName: Full=DNA pol... 601 e-170 tr|D6G7P8|D6G7P8_MYCTU Tax_Id=478435 SubName: Full=DNA polymeras... 601 e-170 tr|D6FVB2|D6FVB2_MYCTU Tax_Id=611304 SubName: Full=DNA polymeras... 601 e-170 tr|D6EZT7|D6EZT7_MYCTU Tax_Id=611302 SubName: Full=DNA polymeras... 601 e-170 tr|D5ZB36|D5ZB36_MYCTU Tax_Id=537210 SubName: Full=DNA polymeras... 601 e-170 tr|D5Z9F5|D5Z9F5_MYCTU Tax_Id=537209 SubName: Full=DNA polymeras... 601 e-170 tr|D5YYK6|D5YYK6_MYCTU Tax_Id=515616 SubName: Full=DNA polymeras... 601 e-170 tr|D5YM32|D5YM32_MYCTU Tax_Id=520140 SubName: Full=DNA polymeras... 601 e-170 tr|D5YAJ1|D5YAJ1_MYCTU Tax_Id=520141 SubName: Full=DNA polymeras... 601 e-170 tr|D5XPA0|D5XPA0_MYCTU Tax_Id=515617 SubName: Full=DNA polymeras... 601 e-170 tr|A4KN34|A4KN34_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 601 e-170 tr|A2VMU4|A2VMU4_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 601 e-170 tr|D6FC54|D6FC54_MYCTU Tax_Id=611303 SubName: Full=DNA polymeras... 601 e-170 tr|Q9EVN6|Q9EVN6_MYCTU Tax_Id=1773 (dnaN)SubName: Full=DnaN;[Myc... 600 e-169 sp|P46387|DPO3B_MYCLE Tax_Id=1769 (dnaN)RecName: Full=DNA polyme... 600 e-169 sp|O33914|DPO3B_MYCBO Tax_Id=1765 (dnaN)RecName: Full=DNA polyme... 600 e-169 tr|C1AIZ9|C1AIZ9_MYCBT Tax_Id=561275 (dnaN)SubName: Full=DNA pol... 600 e-169 tr|B8ZTN9|B8ZTN9_MYCLB Tax_Id=561304 (dnaN)SubName: Full=Putativ... 600 e-169 tr|A1KEE3|A1KEE3_MYCBP Tax_Id=410289 (dnaN_1)SubName: Full=DNA p... 600 e-169 tr|D5PUU1|D5PUU1_COREQ Tax_Id=525370 (dnaN)SubName: Full=DNA-dir... 555 e-156 tr|D5UPA5|D5UPA5_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 541 e-152 tr|Q0SAG6|Q0SAG6_RHOSR Tax_Id=101510 (dnaN)SubName: Full=DNA-dir... 537 e-151 tr|C0ZLE2|C0ZLE2_RHOE4 Tax_Id=234621 (dnaN)SubName: Full=DNA pol... 536 e-150 tr|C3JLE0|C3JLE0_RHOER Tax_Id=596309 (dnaN)SubName: Full=DNA pol... 536 e-150 tr|C1B7S8|C1B7S8_RHOOB Tax_Id=632772 (dnaN)SubName: Full=DNA pol... 533 e-149 tr|Q5Z3Z7|Q5Z3Z7_NOCFA Tax_Id=37329 (dnaN)SubName: Full=Putative... 531 e-149 tr|D0LA34|D0LA34_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 505 e-141 tr|Q5YSM7|Q5YSM7_NOCFA Tax_Id=37329 (dnaN2)SubName: Full=Putativ... 468 e-130 tr|A4F5N3|A4F5N3_SACEN Tax_Id=405948 (dnaN)SubName: Full=DNA pol... 459 e-127 >sp|P52851|DPO3B_MYCSM Tax_Id=1772 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 397 Score = 763 bits (1969), Expect = 0.0 Identities = 397/397 (100%), Positives = 397/397 (100%) Query: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE Sbjct: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 Query: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA Sbjct: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 Query: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD Sbjct: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 Query: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI Sbjct: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 Query: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS Sbjct: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 Query: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP Sbjct: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 Query: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG Sbjct: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 >tr|A0QND6|A0QND6_MYCS2 Tax_Id=246196 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 397 Score = 763 bits (1969), Expect = 0.0 Identities = 397/397 (100%), Positives = 397/397 (100%) Query: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE Sbjct: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 Query: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA Sbjct: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 Query: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD Sbjct: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 Query: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI Sbjct: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 Query: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS Sbjct: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 Query: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP Sbjct: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 Query: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG Sbjct: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 >tr|A1T103|A1T103_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 398 Score = 687 bits (1774), Expect = 0.0 Identities = 348/394 (88%), Positives = 374/394 (94%) Query: 4 TTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSA 63 TTAGLTDLKFR+ REDFADAVAWVAR+LP+RPT+PVLAGVLLTG+DEGLTISGFDYEVSA Sbjct: 5 TTAGLTDLKFRLTREDFADAVAWVARNLPSRPTVPVLAGVLLTGSDEGLTISGFDYEVSA 64 Query: 64 EVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVED 123 EV++ AEIAS GSVLVSGRLLSDI +ALPAKPV+VSVEGTRVSLTCGSARFSLPT+ VED Sbjct: 65 EVQIPAEIASPGSVLVSGRLLSDIVRALPAKPVDVSVEGTRVSLTCGSARFSLPTMPVED 124 Query: 124 YPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFR 183 YP LP LP+ETGV++SDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGE VVLAATDRFR Sbjct: 125 YPTLPTLPDETGVVSSDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGEKVVLAATDRFR 184 Query: 184 LAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSE 243 LAVRELTW T A VEAAVLVPAKTLAEAAKAGTDGN+VHLALG+G SVGK+GLLGIRS+ Sbjct: 185 LAVRELTWSTGAAGVEAAVLVPAKTLAEAAKAGTDGNEVHLALGAGPSVGKEGLLGIRSK 244 Query: 244 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDT 303 GKRSTTRLLDAEFPKFRQLLP EHTA+ATIGVAELTEAIKRVALVADRGAQ+RMEF+D Sbjct: 245 GKRSTTRLLDAEFPKFRQLLPTEHTAIATIGVAELTEAIKRVALVADRGAQVRMEFADGV 304 Query: 304 LKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 363 L+LSAGADDVGRAEEDLPV+F+G+PLTIAFNPTYLTDGL SLH+ERVTFGFTTPSRPAVL Sbjct: 305 LRLSAGADDVGRAEEDLPVEFSGDPLTIAFNPTYLTDGLSSLHAERVTFGFTTPSRPAVL 364 Query: 364 RPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 RPA EDDG GGSGPFPAA+TDYVYLLMPVRLPG Sbjct: 365 RPAAEDDGGAGGSGPFPAAQTDYVYLLMPVRLPG 398 >tr|A3PSD8|A3PSD8_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 687 bits (1773), Expect = 0.0 Identities = 352/394 (89%), Positives = 378/394 (95%), Gaps = 1/394 (0%) Query: 4 TTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSA 63 TTAG TDLKFR+VREDFADAVAWVAR+LPTRPT+PVLAGVLLTG D+GLTISGFDYEVSA Sbjct: 6 TTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFDYEVSA 65 Query: 64 EVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVED 123 EV+V+AEIAS GSVLVSGRLLSDITKALPAKPV+VSVEGTRVSLTCGSARFSLPT+AVED Sbjct: 66 EVRVAAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPTMAVED 125 Query: 124 YPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFR 183 YPALP LP+ETGVI +DLFAEAIGQVAVAAGRDDTLPMLTGIRVEI+GESVVLAATDRFR Sbjct: 126 YPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAATDRFR 185 Query: 184 LAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSE 243 LAVRELTW T++ DVEAAVLVPAKTLAEAAKAGTDG VHLALG+G++VGK+GLLGIRSE Sbjct: 186 LAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLLGIRSE 245 Query: 244 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDT 303 GKRSTTRLLDAEFPKFRQLLP+EHTAVATIGVAELTEAIKRVALVADRGAQ+RMEF+DD Sbjct: 246 GKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRMEFADDV 305 Query: 304 LKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 363 L+LSAGADDVGRAEEDL V F+GEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL Sbjct: 306 LRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 365 Query: 364 RPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 RPAG++D GG+GPFPA +TDYVYLLMPVRLPG Sbjct: 366 RPAGDED-TGGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|Q1BG60|Q1BG60_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 686 bits (1770), Expect = 0.0 Identities = 352/394 (89%), Positives = 377/394 (95%), Gaps = 1/394 (0%) Query: 4 TTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSA 63 TTAG TDLKFR+VREDFADAVAWVAR+LPTRPT+PVLAGVLLTG D+GLTISGFDYEVSA Sbjct: 6 TTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFDYEVSA 65 Query: 64 EVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVED 123 EV+V AEIAS GSVLVSGRLLSDITKALPAKPV+VSVEGTRVSLTCGSARFSLPT+AVED Sbjct: 66 EVRVVAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPTMAVED 125 Query: 124 YPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFR 183 YPALP LP+ETGVI +DLFAEAIGQVAVAAGRDDTLPMLTGIRVEI+GESVVLAATDRFR Sbjct: 126 YPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAATDRFR 185 Query: 184 LAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSE 243 LAVRELTW T++ DVEAAVLVPAKTLAEAAKAGTDG VHLALG+G++VGK+GLLGIRSE Sbjct: 186 LAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLLGIRSE 245 Query: 244 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDT 303 GKRSTTRLLDAEFPKFRQLLP+EHTAVATIGVAELTEAIKRVALVADRGAQ+RMEF+DD Sbjct: 246 GKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRMEFADDV 305 Query: 304 LKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 363 L+LSAGADDVGRAEEDL V F+GEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL Sbjct: 306 LRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 365 Query: 364 RPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 RPAG++D GG+GPFPA +TDYVYLLMPVRLPG Sbjct: 366 RPAGDED-TGGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|A1U8S1|A1U8S1_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 686 bits (1770), Expect = 0.0 Identities = 352/394 (89%), Positives = 377/394 (95%), Gaps = 1/394 (0%) Query: 4 TTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSA 63 TTAG TDLKFR+VREDFADAVAWVAR+LPTRPT+PVLAGVLLTG D+GLTISGFDYEVSA Sbjct: 6 TTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFDYEVSA 65 Query: 64 EVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVED 123 EV+V AEIAS GSVLVSGRLLSDITKALPAKPV+VSVEGTRVSLTCGSARFSLPT+AVED Sbjct: 66 EVRVVAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPTMAVED 125 Query: 124 YPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFR 183 YPALP LP+ETGVI +DLFAEAIGQVAVAAGRDDTLPMLTGIRVEI+GESVVLAATDRFR Sbjct: 126 YPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAATDRFR 185 Query: 184 LAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSE 243 LAVRELTW T++ DVEAAVLVPAKTLAEAAKAGTDG VHLALG+G++VGK+GLLGIRSE Sbjct: 186 LAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLLGIRSE 245 Query: 244 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDT 303 GKRSTTRLLDAEFPKFRQLLP+EHTAVATIGVAELTEAIKRVALVADRGAQ+RMEF+DD Sbjct: 246 GKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRMEFADDV 305 Query: 304 LKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 363 L+LSAGADDVGRAEEDL V F+GEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL Sbjct: 306 LRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 365 Query: 364 RPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 RPAG++D GG+GPFPA +TDYVYLLMPVRLPG Sbjct: 366 RPAGDED-TGGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|A4T4T7|A4T4T7_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 398 Score = 680 bits (1755), Expect = 0.0 Identities = 341/394 (86%), Positives = 374/394 (94%) Query: 4 TTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSA 63 TTAGL+DLKFR+ REDFADAVAWVAR+LP+RPT+PVLAGVLLTG+DEGLT+SGFDYEVSA Sbjct: 5 TTAGLSDLKFRLTREDFADAVAWVARNLPSRPTVPVLAGVLLTGSDEGLTVSGFDYEVSA 64 Query: 64 EVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVED 123 EV++ AEIAS GSVLVSGRLLSDI ++LPAKPV+VSVEGTRVSLTCGSARFSLPT+AVED Sbjct: 65 EVQIPAEIASPGSVLVSGRLLSDIVRSLPAKPVDVSVEGTRVSLTCGSARFSLPTMAVED 124 Query: 124 YPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFR 183 YP LP LP+ETGV+++DLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGE VVLAATDRFR Sbjct: 125 YPTLPTLPDETGVVSADLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGEKVVLAATDRFR 184 Query: 184 LAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSE 243 LAVRELTW A VEAAVLVPAKTLAEAAKAGTDG +VHLALG G +VGK+GLLGIRS+ Sbjct: 185 LAVRELTWSAGAAGVEAAVLVPAKTLAEAAKAGTDGTEVHLALGQGPTVGKEGLLGIRSK 244 Query: 244 GKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDT 303 GKRSTTRLLDAEFPKFRQLLP EHTA+ATIGVAELTEAIKRVALVADRGAQ+RMEF+DD Sbjct: 245 GKRSTTRLLDAEFPKFRQLLPTEHTAIATIGVAELTEAIKRVALVADRGAQVRMEFADDV 304 Query: 304 LKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVL 363 L+LSAGADDVGRAEEDLPV F+G+PLTIAFNP+YLTDGLGSLH+ERVTFGFTTPSRPAVL Sbjct: 305 LRLSAGADDVGRAEEDLPVQFSGDPLTIAFNPSYLTDGLGSLHAERVTFGFTTPSRPAVL 364 Query: 364 RPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 RPAG+DDG+ GSGP+PAA+TDYVYLLMPVRLPG Sbjct: 365 RPAGDDDGSAAGSGPYPAAQTDYVYLLMPVRLPG 398 >sp|Q9L7L6|DPO3B_MYCPA Tax_Id=1770 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium paratuberculosis] Length = 399 Score = 634 bits (1634), Expect = e-180 Identities = 320/396 (80%), Positives = 356/396 (89%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATTTAGL+DLKFR+VRE FADAV+WVA+SLP+RP +PVL+GVLL+GTDEGLTISGFDYEV Sbjct: 4 ATTTAGLSDLKFRLVRESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V+AEIAS GSVLVSGRLLSDI +ALP KP++ V+G RV+L CGSARFSLPT+AV Sbjct: 64 SAEAQVAAEIASPGSVLVSGRLLSDIVRALPNKPIDFYVDGNRVALNCGSARFSLPTMAV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG + +DLFAEAIGQVA+AAGRDDTLPMLTGIRVEISG++VVLAATDR Sbjct: 124 EDYPTLPTLPEETGTLPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVRELTW + D+EAAVLVPAKTLAEAA+ G DG+ V L+LG+GA VGKDGLLGI Sbjct: 184 FRLAVRELTWSAASPDIEAAVLVPAKTLAEAARTGIDGSDVRLSLGAGAGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLPAEHTAVATI VAELTEAIK VALVADRGAQ+RMEFS+ Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPAEHTAVATINVAELTEAIKLVALVADRGAQVRMEFSE 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +L+LSAGADDVGRAEEDL VDFAGEPLTIAFNPTYLTDGLGS+ SERV+FGFTTP +PA Sbjct: 304 GSLRLSAGADDVGRAEEDLAVDFAGEPLTIAFNPTYLTDGLGSVRSERVSFGFTTPGKPA 363 Query: 362 VLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRPA +DD GSGPF A TDYVYLLMPVRLPG Sbjct: 364 LLRPASDDDSPPSGSGPFSALPTDYVYLLMPVRLPG 399 >tr|D5P9Z6|D5P9Z6_9MYCO Tax_Id=525368 (dnaN)SubName: Full=DNA-directed DNA polymerase III beta subunit; EC=2.7.7.7;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 399 Score = 627 bits (1616), Expect = e-177 Identities = 316/396 (79%), Positives = 354/396 (89%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT AGL+DLKFR+VRE FADAV+WVA++LPTRP +PVL+GVLL+G+DEGLTISGFDYEV Sbjct: 4 ATTRAGLSDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLSGSDEGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V+AEIAS GSVLVSGRLLSDIT+ALP KPV+ V+G RV+L CGSARFSLPT+AV Sbjct: 64 SAEAQVAAEIASPGSVLVSGRLLSDITRALPNKPVDFYVDGNRVALNCGSARFSLPTMAV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG + +DLFAEAI QVA+AAGRDDTLPMLTGIRVEISG +VVLAATDR Sbjct: 124 EDYPTLPVLPEETGTLPADLFAEAISQVAIAAGRDDTLPMLTGIRVEISGNTVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVRELTW ++ D+EAAVLVPAKTLAEAA+AG DG++V L+LG+G+ VGKDGLLGI Sbjct: 184 FRLAVRELTWAASSPDIEAAVLVPAKTLAEAARAGADGSEVRLSLGAGSGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLPAEHTAVATI VAELTEAIK VALVADRGAQ+RMEFS+ Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPAEHTAVATINVAELTEAIKLVALVADRGAQVRMEFSE 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +L+LSAGADDVGRAEEDL VDF GEPLTIAFNPTYLTDGL ++HSERV+FGFTTP +PA Sbjct: 304 GSLRLSAGADDVGRAEEDLAVDFVGEPLTIAFNPTYLTDGLAAVHSERVSFGFTTPGKPA 363 Query: 362 VLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRPA DD G GPF A TDYVYLLMPVRLPG Sbjct: 364 LLRPASADDSPPTGDGPFAALPTDYVYLLMPVRLPG 399 >tr|B2HI47|B2HI47_MYCMM Tax_Id=216594 (dnaN)SubName: Full=DNA polymerase III (Beta chain) DnaN;[Mycobacterium marinum] Length = 402 Score = 616 bits (1588), Expect = e-174 Identities = 313/399 (78%), Positives = 352/399 (88%), Gaps = 3/399 (0%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT AGLTDLKFR+VRE FADAV+WVA++LPTRP +PVL+GVLLTG+DEGLTISGFDYEV Sbjct: 4 ATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAEV+V AEIAS G+VLVSGRLLSDIT+ALP KPV+ V+G RV+LTCG+ARFSLPT+AV Sbjct: 64 SAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPE+TG + ++LF+EAIGQVA+AAGRDDTLPMLTGIRVEISGE VVLAATDR Sbjct: 124 EDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVRELTW + D+EAAVLVPAKTL EAAKA TDG++V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 +GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ VAELTEAIK VALVADRGAQ+RMEF+D Sbjct: 244 GDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 L+LSAGADDVGRAEED+ V+FAG+PLTIAFNPTYL DGL SLHSERV+FGFTTP +PA Sbjct: 304 GMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPA 363 Query: 362 VLRPAGEDD---GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRPA +D G GPF A TDYVYLLMPVRLPG Sbjct: 364 LLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 >tr|A0PKB3|A0PKB3_MYCUA Tax_Id=362242 (dnaN)SubName: Full=DNA polymerase III (Beta chain) DnaN;[Mycobacterium ulcerans] Length = 402 Score = 612 bits (1578), Expect = e-173 Identities = 311/399 (77%), Positives = 350/399 (87%), Gaps = 3/399 (0%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT AGLTDLKFR+V E FADAV+WVA++LPTRP +PVL+GVLLTG+DEGLTISGFDYEV Sbjct: 4 ATTRAGLTDLKFRLVPESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAEV+V AEIAS G+VLVSGRLLSDIT+ALP KPV+ V+G RV+LTCG+ARFSLPT+AV Sbjct: 64 SAEVRVPAEIASPGTVLVSGRLLSDITRALPKKPVDFYVDGNRVALTCGNARFSLPTMAV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPE+TG + ++LF+EAIGQVA+ AGRDDTLPMLTGIRVEISGE VVLAATDR Sbjct: 124 EDYPTLPTLPEDTGTLPAELFSEAIGQVAITAGRDDTLPMLTGIRVEISGEKVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVRELTW + D+EAAVLVPAKTL EAAKA TDG++V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 +GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ VAELTEAIK VALVADRGAQ+RMEF+D Sbjct: 244 GDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 L+LSAGADDVGRAEED+ V+FAG+PLTIAFNPTYL DGL SLHSERV+FGFTTP +PA Sbjct: 304 GMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPA 363 Query: 362 VLRPAGEDD---GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRPA +D G GPF A TDYVYLLMPVRLPG Sbjct: 364 LLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 >tr|A0Q8R7|A0Q8R7_MYCA1 Tax_Id=243243 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium avium] Length = 382 Score = 609 bits (1570), Expect = e-172 Identities = 307/382 (80%), Positives = 342/382 (89%) Query: 16 VREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKVSAEIASAG 75 +RE FADAV+WVA+SLP+RP +PVL+GVLL+GTDEGLTISGFDYEVSAE +V+AEIAS G Sbjct: 1 MRESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFDYEVSAEAQVAAEIASPG 60 Query: 76 SVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPALPALPEETG 135 SVLVSGRLLSDI +ALP KP++ V+G RV+L CGSARFSLPT+AVEDYP LP LPEETG Sbjct: 61 SVLVSGRLLSDIVRALPNKPIDFYVDGNRVALNCGSARFSLPTMAVEDYPTLPTLPEETG 120 Query: 136 VIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVRELTWVTTA 195 + +DLFAEAIGQVA+AAGRDDTLPMLTGIRVEISG++VVLAATDRFRLAVRELTW + Sbjct: 121 TLPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAATDRFRLAVRELTWSAAS 180 Query: 196 GDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSEGKRSTTRLLDAE 255 D+EAAVLVPAKTLAEAA+ G DG+ V L+LG+GA VGKDGLLGI GKRSTTRLLDAE Sbjct: 181 PDIEAAVLVPAKTLAEAARTGIDGSDVRLSLGAGAGVGKDGLLGISGNGKRSTTRLLDAE 240 Query: 256 FPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLKLSAGADDVGR 315 FPKFRQLLPAEHTAVATI VAELTEAIK VALVADRGAQ+RMEFS+ +L+LSAGADDVGR Sbjct: 241 FPKFRQLLPAEHTAVATINVAELTEAIKLVALVADRGAQVRMEFSEGSLRLSAGADDVGR 300 Query: 316 AEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRPAGEDDGANGG 375 AEEDL VDFAGEPLTIAFNPTYLTDGLGS+ SERV+FGFTTP +PA+LRPA +DD G Sbjct: 301 AEEDLAVDFAGEPLTIAFNPTYLTDGLGSVRSERVSFGFTTPGKPALLRPASDDDSPPSG 360 Query: 376 SGPFPAAKTDYVYLLMPVRLPG 397 SGPF A TDYVYLLMPVRLPG Sbjct: 361 SGPFSALPTDYVYLLMPVRLPG 382 >tr|B1MDH7|B1MDH7_MYCA9 Tax_Id=561007 (dnaN)SubName: Full=DNA polymerase III, beta subunit (DnaN);[Mycobacterium abscessus] Length = 399 Score = 605 bits (1561), Expect = e-171 Identities = 301/397 (75%), Positives = 355/397 (89%) Query: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 +A+ TA T LKFRV R+DFAD+VAWVARSLP+RPT+PVLAGVLLT D GLT+SGFDYE Sbjct: 3 LASPTAADTSLKFRVARDDFADSVAWVARSLPSRPTVPVLAGVLLTAHDTGLTLSGFDYE 62 Query: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 VSA+VKV AE+A+AG+ LVSGRLLSDIT++LP KPV+V++EGTR+ ++CGSA+FSLP++ Sbjct: 63 VSAQVKVPAEVAAAGNALVSGRLLSDITRSLPNKPVDVALEGTRLLISCGSAKFSLPSMP 122 Query: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 VEDYPALP+LPEETG + +D+F+EAIGQVAVAAG+DDTLPMLTGIRVEI+G++VVLAATD Sbjct: 123 VEDYPALPSLPEETGALGADVFSEAIGQVAVAAGKDDTLPMLTGIRVEINGDTVVLAATD 182 Query: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 RFRLAVREL W + +G+ AAVLVPAKTL+EAAK+ + G+ V LALG+G+++G +GLLGI Sbjct: 183 RFRLAVRELNWTSGSGETSAAVLVPAKTLSEAAKSASSGSDVQLALGAGSAIGSEGLLGI 242 Query: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 S+GKRSTTRLLDAEFPKFRQLLP EHTA+ATI ++EL EAIKRVALVADRGAQIR+EF Sbjct: 243 VSDGKRSTTRLLDAEFPKFRQLLPTEHTALATIAISELVEAIKRVALVADRGAQIRLEFE 302 Query: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 L+LSAGADDVGRAEE+L V+F GEPLTIAFNPTYLTDGLGSLHS RVTFGFTTPSRP Sbjct: 303 PGLLRLSAGADDVGRAEEELEVEFVGEPLTIAFNPTYLTDGLGSLHSNRVTFGFTTPSRP 362 Query: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 AVLRPA +D + GSGPF AA+TDYVYLLMPVRLPG Sbjct: 363 AVLRPADDDQSSPEGSGPFTAAQTDYVYLLMPVRLPG 399 >sp|Q50790|DPO3B_MYCTU Tax_Id=1773 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|C6DQ77|C6DQ77_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A5WI56|A5WI56_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase III beta subunit dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A5TY70|A5TY70_MYCTA Tax_Id=419947 (dnaN)SubName: Full=DNA polymerase III subunit beta DnaN;[Mycobacterium tuberculosis] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D6G7P8|D6G7P8_MYCTU Tax_Id=478435 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis KZN 605] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D6FVB2|D6FVB2_MYCTU Tax_Id=611304 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis K85] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D6EZT7|D6EZT7_MYCTU Tax_Id=611302 SubName: Full=DNA polymerase III, beta subunit;[Mycobacterium tuberculosis T46] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D5ZB36|D5ZB36_MYCTU Tax_Id=537210 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis T17] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D5Z9F5|D5Z9F5_MYCTU Tax_Id=537209 SubName: Full=DNA polymerase III (Beta chain) dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis GM 1503] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D5YYK6|D5YYK6_MYCTU Tax_Id=515616 SubName: Full=DNA polymerase III subunit beta DnaN;[Mycobacterium tuberculosis 02_1987] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D5YM32|D5YM32_MYCTU Tax_Id=520140 SubName: Full=DNA polymerase III subunit beta;[Mycobacterium tuberculosis EAS054] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D5YAJ1|D5YAJ1_MYCTU Tax_Id=520141 SubName: Full=DNA polymerase III subunit beta;[Mycobacterium tuberculosis T85] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D5XPA0|D5XPA0_MYCTU Tax_Id=515617 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis T92] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A4KN34|A4KN34_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase III (Beta chain) dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis str. Haarlem] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A2VMU4|A2VMU4_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase III (Beta chain) dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis C] Length = 402 Score = 601 bits (1550), Expect = e-170 Identities = 309/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D6FC54|D6FC54_MYCTU Tax_Id=611303 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis CPHL_A] Length = 402 Score = 601 bits (1549), Expect = e-170 Identities = 309/400 (77%), Positives = 345/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GDGPFPAVSTDYVYLLMPVRLPG 402 >tr|Q9EVN6|Q9EVN6_MYCTU Tax_Id=1773 (dnaN)SubName: Full=DnaN;[Mycobacterium tuberculosis] Length = 402 Score = 600 bits (1547), Expect = e-169 Identities = 308/400 (77%), Positives = 346/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S G+VLVSGRLLSDIT+ALP KPV+V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGTVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >sp|P46387|DPO3B_MYCLE Tax_Id=1769 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium leprae] Length = 399 Score = 600 bits (1546), Expect = e-169 Identities = 307/397 (77%), Positives = 340/397 (85%) Query: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 +A T G +DLKF + RE FA AV+WVA+ LPTRPT+PVL+GVLLTG+D GLTISGFDYE Sbjct: 3 LAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYE 62 Query: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 VSAEV+V+AEIAS+GSVLVSGRLLSDIT+ALP KPV V+G RV+LTCGSARFSLPT+A Sbjct: 63 VSAEVQVAAEIASSGSVLVSGRLLSDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMA 122 Query: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 VEDYP LP LP+ETG + SD+FAEAIGQVA+AAGRD TLPMLTGIR+EISG++VVLAATD Sbjct: 123 VEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATD 182 Query: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 RFRLAVREL W + D EA+VLVPAKTL E AKAGTDG+ V L+LG+G VGKDGL GI Sbjct: 183 RFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGI 242 Query: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 GKRSTTRLLDAEFPKFRQLLPAEHTAVATI VAELTEAIK VALVADRGAQ+RMEF Sbjct: 243 SGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFG 302 Query: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 D L+LSAGADDVGRAEEDL V F GEPLTIAFNP YLTDGL S+HSERV+FGFTTPS+P Sbjct: 303 DGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKP 362 Query: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 A+LRP DD GPFPA TDYVYLLMPVRLPG Sbjct: 363 ALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 >sp|O33914|DPO3B_MYCBO Tax_Id=1765 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 600 bits (1546), Expect = e-169 Identities = 309/400 (77%), Positives = 345/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|C1AIZ9|C1AIZ9_MYCBT Tax_Id=561275 (dnaN)SubName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 600 bits (1546), Expect = e-169 Identities = 309/400 (77%), Positives = 345/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|B8ZTN9|B8ZTN9_MYCLB Tax_Id=561304 (dnaN)SubName: Full=Putative DNA polymerase III, [beta] subunit; EC=2.7.7.7;[Mycobacterium leprae] Length = 399 Score = 600 bits (1546), Expect = e-169 Identities = 307/397 (77%), Positives = 340/397 (85%) Query: 1 MATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYE 60 +A T G +DLKF + RE FA AV+WVA+ LPTRPT+PVL+GVLLTG+D GLTISGFDYE Sbjct: 3 LAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFDYE 62 Query: 61 VSAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLA 120 VSAEV+V+AEIAS+GSVLVSGRLLSDIT+ALP KPV V+G RV+LTCGSARFSLPT+A Sbjct: 63 VSAEVQVAAEIASSGSVLVSGRLLSDITRALPNKPVHFYVDGNRVALTCGSARFSLPTMA 122 Query: 121 VEDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATD 180 VEDYP LP LP+ETG + SD+FAEAIGQVA+AAGRD TLPMLTGIR+EISG++VVLAATD Sbjct: 123 VEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAATD 182 Query: 181 RFRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGI 240 RFRLAVREL W + D EA+VLVPAKTL E AKAGTDG+ V L+LG+G VGKDGL GI Sbjct: 183 RFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLFGI 242 Query: 241 RSEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFS 300 GKRSTTRLLDAEFPKFRQLLPAEHTAVATI VAELTEAIK VALVADRGAQ+RMEF Sbjct: 243 SGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRMEFG 302 Query: 301 DDTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRP 360 D L+LSAGADDVGRAEEDL V F GEPLTIAFNP YLTDGL S+HSERV+FGFTTPS+P Sbjct: 303 DGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPSKP 362 Query: 361 AVLRPAGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 A+LRP DD GPFPA TDYVYLLMPVRLPG Sbjct: 363 ALLRPTSNDDVHPTHDGPFPALPTDYVYLLMPVRLPG 399 >tr|A1KEE3|A1KEE3_MYCBP Tax_Id=410289 (dnaN_1)SubName: Full=DNA polymerase III subunit beta dnaN; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 600 bits (1546), Expect = e-169 Identities = 309/400 (77%), Positives = 345/400 (86%), Gaps = 5/400 (1%) Query: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 ATT GLTDL FR++RE FADAV+WVA++LP RP +PVL+GVLLTG+D GLTISGFDYEV Sbjct: 4 ATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEV 63 Query: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 SAE +V AEI S GSVLVSGRLLSDIT+ALP KPV V VEG RV+LTCG+ARFSLPT+ V Sbjct: 64 SAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPTMPV 123 Query: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 EDYP LP LPEETG++ ++LFAEAI QVA+AAGRDDTLPMLTGIRVEI GE+VVLAATDR Sbjct: 124 EDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDR 183 Query: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 FRLAVREL W ++ D+EAAVLVPAKTLAEAAKAG G+ V L+LG+G VGKDGLLGI Sbjct: 184 FRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGIS 243 Query: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 GKRSTTRLLDAEFPKFRQLLP EHTAVAT+ VAEL EAIK VALVADRGAQ+RMEF+D Sbjct: 244 GNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRMEFAD 303 Query: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 +++LSAGADDVGRAEEDL VD+AGEPLTIAFNPTYLTDGL SL SERV+FGFTT +PA Sbjct: 304 GSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPA 363 Query: 362 VLRPAGEDD----GANGGSGPFPAAKTDYVYLLMPVRLPG 397 +LRP DD G N G+GPFPA TDYVYLLMPVRLPG Sbjct: 364 LLRPVSGDDRPVAGLN-GNGPFPAVSTDYVYLLMPVRLPG 402 >tr|D5PUU1|D5PUU1_COREQ Tax_Id=525370 (dnaN)SubName: Full=DNA-directed DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus equi ATCC 33707] Length = 394 Score = 555 bits (1429), Expect = e-156 Identities = 280/392 (71%), Positives = 332/392 (84%), Gaps = 2/392 (0%) Query: 8 LTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKV 67 L +KFRV REDFAD+VAWVARSLP+RP +PVL GVLL ++GLT+SGFDYEVSA+V+V Sbjct: 3 LGSMKFRVAREDFADSVAWVARSLPSRPPVPVLGGVLLGADEQGLTVSGFDYEVSAQVRV 62 Query: 68 SAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPAL 127 SAE+ + G VLVSG+LL+DIT+ALP KPV+V+V+GTRV + CGSA+FSLPT+ VEDYP L Sbjct: 63 SAEVTTTGQVLVSGKLLADITRALPNKPVDVTVDGTRVLIACGSAKFSLPTMPVEDYPQL 122 Query: 128 PALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVR 187 P LP++TG + DLF+EA+ QVAVAAG+DDTLPMLTGIRVEI G VVLAATDRFRLAVR Sbjct: 123 PTLPQQTGSLPVDLFSEAVSQVAVAAGKDDTLPMLTGIRVEIEGTDVVLAATDRFRLAVR 182 Query: 188 ELTWVTTAGDVEAAVLVPAKTLAEAAK--AGTDGNQVHLALGSGASVGKDGLLGIRSEGK 245 +L W+ TAGDV AAVLVPA+TL+E+AK G + V LALG+GASVG +G+LGI ++G+ Sbjct: 183 KLEWMPTAGDVTAAVLVPARTLSESAKTLGGNTLSPVELALGAGASVGTEGMLGIVADGR 242 Query: 246 RSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLK 305 R+TTRLLDAEFPKFRQLLPAEHTA+AT+ VA L +AIKRVALVA+RGAQ+R+EF+ + L Sbjct: 243 RTTTRLLDAEFPKFRQLLPAEHTAMATVTVAPLVDAIKRVALVAERGAQVRLEFNSEGLV 302 Query: 306 LSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRP 365 LSAG DD GRAEE L DF GEPL IAFNP YL DGL SLHSERVTFGFTTPSRPAVLRP Sbjct: 303 LSAGGDDAGRAEEALEADFQGEPLVIAFNPGYLIDGLNSLHSERVTFGFTTPSRPAVLRP 362 Query: 366 AGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 AGE++ G SG F A ++DY+YLLMPVRLPG Sbjct: 363 AGEEELERGESGTFAAPESDYIYLLMPVRLPG 394 >tr|D5UPA5|D5UPA5_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 396 Score = 541 bits (1393), Expect = e-152 Identities = 270/391 (69%), Positives = 323/391 (82%) Query: 7 GLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVK 66 G +KFRV E+FA++VAWVARSLP+RP +PVL GVLLT D+GLT+SGFDYEVSA+V+ Sbjct: 6 GSVGMKFRVPHEEFAESVAWVARSLPSRPPVPVLGGVLLTAGDDGLTVSGFDYEVSAQVR 65 Query: 67 VSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPA 126 V AE+A G VLVSGRLL+DITKALP KPV+V ++ TRV+++CGSA+FSLPT+ VEDYP Sbjct: 66 VGAEVADEGQVLVSGRLLADITKALPNKPVDVELDVTRVAISCGSAKFSLPTMPVEDYPQ 125 Query: 127 LPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAV 186 LP LP++TG I +FAEAI QVA+AAG+DDTLPMLTGIRVEI G+ VVLAATDRFRLAV Sbjct: 126 LPELPQQTGAIERSMFAEAISQVAIAAGKDDTLPMLTGIRVEIEGQRVVLAATDRFRLAV 185 Query: 187 RELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSEGKR 246 RE W +GDV+AAVLVPAKTL+EAAK ++V +ALG+G++VG DGLLG+ +R Sbjct: 186 REFDWQPQSGDVKAAVLVPAKTLSEAAKTFAGDSEVGIALGAGSAVGADGLLGVVGPDRR 245 Query: 247 STTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLKL 306 +TTRLLDA+FPKFRQLLPA HTA+AT+ +A L EAIKRVALVADRGAQ+RMEF D TL+L Sbjct: 246 TTTRLLDADFPKFRQLLPASHTAIATMEIAPLLEAIKRVALVADRGAQVRMEFGDGTLRL 305 Query: 307 SAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRPA 366 SAG DD G+AEE+LP DF GEPLTIAFNP YL DGL ++H++ VTFGFTTPSRPAVLRP Sbjct: 306 SAGGDDAGKAEEELPADFQGEPLTIAFNPGYLQDGLAAIHTDSVTFGFTTPSRPAVLRPT 365 Query: 367 GEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 E+ SG FPA ++ Y YLLMPVRLPG Sbjct: 366 VENAFQPDDSGAFPAPQSAYTYLLMPVRLPG 396 >tr|Q0SAG6|Q0SAG6_RHOSR Tax_Id=101510 (dnaN)SubName: Full=DNA-directed DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus sp.] Length = 394 Score = 537 bits (1384), Expect = e-151 Identities = 276/392 (70%), Positives = 327/392 (83%), Gaps = 2/392 (0%) Query: 8 LTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKV 67 L LKFRV RE+FAD+VAWVARSLP+RP +PVL GVLL T++GLT+SGFDYEVSA+V+V Sbjct: 3 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEQGLTVSGFDYEVSAQVRV 62 Query: 68 SAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPAL 127 +AE+ SAG VLVSG+LL+DITK+LP KPV+V++EGTRV +TCGSA+FSLPT+ VEDYP L Sbjct: 63 AAEVGSAGQVLVSGKLLADITKSLPNKPVDVTLEGTRVLITCGSAKFSLPTMPVEDYPQL 122 Query: 128 PALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVR 187 P LP++TG I +D+F+EAI QVAVAAG+DDTLPMLTGIRVEI ++VLAATDRFRLAVR Sbjct: 123 PQLPQQTGSIPADVFSEAISQVAVAAGKDDTLPMLTGIRVEIERNAIVLAATDRFRLAVR 182 Query: 188 ELTWVTTAGDVEAAVLVPAKTLAEAAK--AGTDGNQVHLALGSGASVGKDGLLGIRSEGK 245 EL W D AAVL+PAKTL+E+AK AG + V LALGSG++VG DGLLGI ++G+ Sbjct: 183 ELEWSPANPDTTAAVLIPAKTLSESAKTLAGDATSPVELALGSGSAVGNDGLLGIVNDGR 242 Query: 246 RSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLK 305 R+TTRLLDAEFPKFRQLLP+EHTA+AT+ +A L EAIKRVALVA+RGAQ+R++FS + L Sbjct: 243 RTTTRLLDAEFPKFRQLLPSEHTALATVEIAPLVEAIKRVALVAERGAQVRLQFSTEGLL 302 Query: 306 LSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRP 365 LSAG DD GRAEE L F GEPLTIAFNP YL DGL SLHSE+V FGFTTPSRPAVLRP Sbjct: 303 LSAGGDDAGRAEEGLNAVFQGEPLTIAFNPGYLIDGLSSLHSEQVLFGFTTPSRPAVLRP 362 Query: 366 AGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 A ED+ SG F A ++ Y YLLMPVRLPG Sbjct: 363 ATEDEIEPDDSGNFAAPESAYTYLLMPVRLPG 394 >tr|C0ZLE2|C0ZLE2_RHOE4 Tax_Id=234621 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 394 Score = 536 bits (1382), Expect = e-150 Identities = 275/392 (70%), Positives = 322/392 (82%), Gaps = 2/392 (0%) Query: 8 LTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKV 67 L LKFRV RE+FAD+VAWVARSLP+RP +PVL GVLL T+ GLT+SGFDYEVSA+V+V Sbjct: 3 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEAGLTVSGFDYEVSAQVRV 62 Query: 68 SAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPAL 127 SA++ +AG LVSGRLL+DITK+LP KPV+V++EGTRV ++CGSA+FSLPT+ VEDYP L Sbjct: 63 SADVTTAGQALVSGRLLADITKSLPNKPVDVTLEGTRVLISCGSAKFSLPTMPVEDYPQL 122 Query: 128 PALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVR 187 P LP+++G I DLF+EAI QVAVAAG+DDTLPMLTGIRVEI S+VLAATDRFRLAVR Sbjct: 123 PTLPQQSGSIPVDLFSEAISQVAVAAGKDDTLPMLTGIRVEIEQNSIVLAATDRFRLAVR 182 Query: 188 ELTWVTTAGDVEAAVLVPAKTLAEAAK--AGTDGNQVHLALGSGASVGKDGLLGIRSEGK 245 EL W DV+AAVL+PAKTL+E+AK AG + V LALGSG ++G DGLLGI ++G+ Sbjct: 183 ELEWTPANPDVQAAVLIPAKTLSESAKTLAGNANSPVELALGSGTTIGNDGLLGIVNDGR 242 Query: 246 RSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLK 305 R+TTRLLDAEFPKFRQLLPA+HTA+AT+ V L EAIKRVALVA+RGAQ+RM+FS D L Sbjct: 243 RTTTRLLDAEFPKFRQLLPAQHTAMATVEVTPLIEAIKRVALVAERGAQVRMQFSADGLL 302 Query: 306 LSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRP 365 LSAG DD GRAEE L F GE LTIAFNP YL DGL SLHSE V FGFTTPSRPAVLRP Sbjct: 303 LSAGGDDAGRAEETLNASFQGEALTIAFNPGYLIDGLNSLHSENVLFGFTTPSRPAVLRP 362 Query: 366 AGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 A E++ SG F A ++Y YLLMPVRLPG Sbjct: 363 AAEEEPTADESGNFAAPSSEYTYLLMPVRLPG 394 >tr|C3JLE0|C3JLE0_RHOER Tax_Id=596309 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Rhodococcus erythropolis SK121] Length = 403 Score = 536 bits (1382), Expect = e-150 Identities = 275/392 (70%), Positives = 322/392 (82%), Gaps = 2/392 (0%) Query: 8 LTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKV 67 L LKFRV RE+FAD+VAWVARSLP+RP +PVL GVLL T+ GLT+SGFDYEVSA+V+V Sbjct: 12 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEAGLTVSGFDYEVSAQVRV 71 Query: 68 SAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPAL 127 SA++ +AG LVSGRLL+DITK+LP KPV+V++EGTRV ++CGSA+FSLPT+ VEDYP L Sbjct: 72 SADVTTAGQALVSGRLLADITKSLPNKPVDVTLEGTRVLISCGSAKFSLPTMPVEDYPQL 131 Query: 128 PALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVR 187 P LP+++G I DLF+EAI QVAVAAG+DDTLPMLTGIRVEI S+VLAATDRFRLAVR Sbjct: 132 PTLPQQSGSIPVDLFSEAISQVAVAAGKDDTLPMLTGIRVEIEQNSIVLAATDRFRLAVR 191 Query: 188 ELTWVTTAGDVEAAVLVPAKTLAEAAK--AGTDGNQVHLALGSGASVGKDGLLGIRSEGK 245 EL W DV+AAVL+PAKTL+E+AK AG + V LALGSG ++G DGLLGI ++G+ Sbjct: 192 ELEWTPANPDVQAAVLIPAKTLSESAKTLAGNANSPVELALGSGTTIGNDGLLGIVNDGR 251 Query: 246 RSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLK 305 R+TTRLLDAEFPKFRQLLPA+HTA+AT+ V L EAIKRVALVA+RGAQ+RM+FS D L Sbjct: 252 RTTTRLLDAEFPKFRQLLPAQHTAMATVEVTPLIEAIKRVALVAERGAQVRMQFSADGLL 311 Query: 306 LSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRP 365 LSAG DD GRAEE L F GE LTIAFNP YL DGL SLHSE V FGFTTPSRPAVLRP Sbjct: 312 LSAGGDDAGRAEETLNASFQGEALTIAFNPGYLIDGLNSLHSENVLFGFTTPSRPAVLRP 371 Query: 366 AGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 A E++ SG F A ++Y YLLMPVRLPG Sbjct: 372 AAEEEPTADESGNFAAPSSEYTYLLMPVRLPG 403 >tr|C1B7S8|C1B7S8_RHOOB Tax_Id=632772 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 394 Score = 533 bits (1372), Expect = e-149 Identities = 274/392 (69%), Positives = 326/392 (83%), Gaps = 2/392 (0%) Query: 8 LTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKV 67 L LKFRV RE+FAD+VAWVARSLP+RP +PVL GVLL T++GLT+SGFDYEVSA+V+V Sbjct: 3 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEQGLTVSGFDYEVSAQVRV 62 Query: 68 SAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPAL 127 +AE+ SAG VLVSG+LL+DITK+LP KPV+V++EGTRV +TCGSA+FSLPT+ VEDYP L Sbjct: 63 AAEVGSAGQVLVSGKLLADITKSLPNKPVDVTLEGTRVLITCGSAKFSLPTMPVEDYPQL 122 Query: 128 PALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVR 187 P LP++TG I +D+F+EAI QVAVAAG+DDTLPMLTGIRVEI ++VLAATDRFRLAVR Sbjct: 123 PQLPQQTGSIPADVFSEAISQVAVAAGKDDTLPMLTGIRVEIERNAIVLAATDRFRLAVR 182 Query: 188 ELTWVTTAGDVEAAVLVPAKTLAEAAK--AGTDGNQVHLALGSGASVGKDGLLGIRSEGK 245 EL W D AAVL+PAKTL+E+AK AG + V LALGSG++VG DGLLGI ++G+ Sbjct: 183 ELEWSPANPDTTAAVLIPAKTLSESAKTLAGDATSPVELALGSGSAVGNDGLLGIVNDGR 242 Query: 246 RSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLK 305 R+TTRLLDAEFPKFRQLLP+EHTA+AT+ +A L EAIKRVALVA+RGAQ+R++FS + L Sbjct: 243 RTTTRLLDAEFPKFRQLLPSEHTALATVEIAPLVEAIKRVALVAERGAQVRLQFSTEGLL 302 Query: 306 LSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRP 365 LSAG DD GRAEE L F GE LTIAFNP YL DGL SLHSE+V FGFTTPSRPAVLRP Sbjct: 303 LSAGGDDAGRAEEGLNAVFQGESLTIAFNPGYLIDGLSSLHSEQVLFGFTTPSRPAVLRP 362 Query: 366 AGEDDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 A E++ SG F A ++ Y YLLMPVRLPG Sbjct: 363 ATEEEIEPDDSGNFAAPESAYTYLLMPVRLPG 394 >tr|Q5Z3Z7|Q5Z3Z7_NOCFA Tax_Id=37329 (dnaN)SubName: Full=Putative DNA polymerase III beta subunit;[Nocardia farcinica] Length = 386 Score = 531 bits (1367), Expect = e-149 Identities = 271/388 (69%), Positives = 319/388 (82%), Gaps = 3/388 (0%) Query: 11 LKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKVSAE 70 +KFRV REDFA++VAWVARSLP+RP +PVL GVLL ++GLT+SGFDYEVSA+++V+AE Sbjct: 1 MKFRVAREDFAESVAWVARSLPSRPPVPVLGGVLLVANEDGLTVSGFDYEVSAQMRVAAE 60 Query: 71 IASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPALPAL 130 +A G VLVSGRLL+DITKAL KPV+VSV+GTRV +TCGSA+FSLPT+ VEDYP LP + Sbjct: 61 VAGPGEVLVSGRLLADITKALSNKPVDVSVDGTRVLITCGSAKFSLPTMPVEDYPQLPEV 120 Query: 131 PEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVRELT 190 P++TG ++ D+FAEA+GQVAVAAGRDDTLPMLTGIRVEI G VVLAATDRFRLAVR + Sbjct: 121 PQQTGELSVDVFAEAVGQVAVAAGRDDTLPMLTGIRVEIEGSQVVLAATDRFRLAVRHIE 180 Query: 191 WVTTAGDVEAAVLVPAKTLAEAAKA-GTDGNQVHLALGSGASVGKDGLLGIRSEGKRSTT 249 W D+E AVL+PA+TL+EAAK G V L+LG+GA G DGLLGI + G+R+TT Sbjct: 181 WTPARPDIETAVLIPARTLSEAAKTLGASDAPVQLSLGTGA--GSDGLLGIVNAGRRTTT 238 Query: 250 RLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLKLSAG 309 RLLDAEFPKFRQLLP EHT+VAT+ VA LTEAIKRVALVA+RGAQ+R+EFS + L LSAG Sbjct: 239 RLLDAEFPKFRQLLPKEHTSVATLAVAALTEAIKRVALVAERGAQVRLEFSTEGLLLSAG 298 Query: 310 ADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRPAGED 369 DD GRAEE L DF GEPLTIAFNP YL DGL +LH++RVTFGFTTPSRPAVL PA E+ Sbjct: 299 GDDAGRAEEWLEADFRGEPLTIAFNPGYLVDGLSALHADRVTFGFTTPSRPAVLLPASEE 358 Query: 370 DGANGGSGPFPAAKTDYVYLLMPVRLPG 397 + SG F A +Y YLLMPVRLPG Sbjct: 359 EPQTLDSGAFAALTGNYTYLLMPVRLPG 386 >tr|D0LA34|D0LA34_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Gordonia bronchialis] Length = 388 Score = 505 bits (1301), Expect = e-141 Identities = 260/389 (66%), Positives = 316/389 (81%), Gaps = 3/389 (0%) Query: 11 LKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKVSAE 70 +KFRV R++FAD+VAWVARSLP+RP +PVL V+L G D+GLTISGFDYEVSA+ ++AE Sbjct: 1 MKFRVARDEFADSVAWVARSLPSRPPVPVLGCVVL-GADDGLTISGFDYEVSAQESIAAE 59 Query: 71 IASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPALPAL 130 IA G VLVSGRLL+DITKALP KPV+V+++G RV++ CGSA+FSLPT+ VEDYP LP + Sbjct: 60 IAEPGQVLVSGRLLADITKALPNKPVDVTLDGARVAIACGSAKFSLPTMPVEDYPQLPDV 119 Query: 131 PEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVRELT 190 P +G I + LFAEAI QVA+AAGRDDTLPMLTG+RVEI G +VVLAATDRFRLAVREL Sbjct: 120 PAISGTIPTQLFAEAISQVAIAAGRDDTLPMLTGVRVEIEGSTVVLAATDRFRLAVRELQ 179 Query: 191 WVTTAGDVEAAVLVPAKTLAEAAK-AGTDG-NQVHLALGSGASVGKDGLLGIRSEGKRST 248 W T D AVLVPAKTL+E+AK AG +G V LA G+G+++G DG+LGI E KR+T Sbjct: 180 WEPTDPDTSGAVLVPAKTLSESAKTAGAEGTGVVSLAFGNGSAIGNDGILGILGETKRTT 239 Query: 249 TRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLKLSA 308 TRLLDAEFPKFRQLLPA HTA+ATI A L EAIKRVALVA+RGAQ+R+EF + ++ L+A Sbjct: 240 TRLLDAEFPKFRQLLPASHTAIATIDSAPLIEAIKRVALVAERGAQVRLEFGEGSVLLTA 299 Query: 309 GADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRPAGE 368 G D+ G+AEE+LPV FAGE LTIAFNP YL DGL +++++ V FGFTTPSRPAVLRP+ Sbjct: 300 GGDEAGKAEEELPVQFAGEALTIAFNPGYLLDGLSAINADTVDFGFTTPSRPAVLRPSSG 359 Query: 369 DDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 + A SG F A ++ + YLLMPVRLPG Sbjct: 360 EQPAADESGAFAAPESAFTYLLMPVRLPG 388 >tr|Q5YSM7|Q5YSM7_NOCFA Tax_Id=37329 (dnaN2)SubName: Full=Putative DNA polymerase III beta subunit;[Nocardia farcinica] Length = 381 Score = 468 bits (1203), Expect = e-130 Identities = 243/387 (62%), Positives = 293/387 (75%), Gaps = 8/387 (2%) Query: 11 LKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEVSAEVKVSAE 70 ++FRV R D ADA WVARSLP+RP +PVL G L D+GLTIS FDYEVSA+++++AE Sbjct: 3 IRFRVARGDLADAATWVARSLPSRPPVPVLGGAHLRADDDGLTISVFDYEVSAQMRIAAE 62 Query: 71 IASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPALPAL 130 +A G VLVSG+LL+DITKALP KPV+++ +G+RV + CGSA+FSLPT+ VEDYP LP + Sbjct: 63 VAHDGEVLVSGKLLADITKALPNKPVDITFDGSRVLIACGSAKFSLPTMPVEDYPKLPDV 122 Query: 131 PEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVRELT 190 P +G +A+DLFA A+ QVAVAAGRDDTLPMLTGIRVEI G V LAATDR+RLAVR L Sbjct: 123 PARSGELAADLFATAVSQVAVAAGRDDTLPMLTGIRVEIDGAEVTLAATDRYRLAVRTLE 182 Query: 191 WVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIRSEGKRSTTR 250 W T VE VLVPA+TLAEA KA LA+ D + G+ + +R+TTR Sbjct: 183 WSPTDPSVETQVLVPARTLAEAVKALESAAPARLAI-------DDSMFGLVNARRRTTTR 235 Query: 251 LLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLKLSAGA 310 LLDAEFPKFRQLLP EHT+VAT+ V +L +AIKRVALVA+RGAQ+R+EFS+D L LSAG Sbjct: 236 LLDAEFPKFRQLLPKEHTSVATVFVPDLVDAIKRVALVAERGAQVRLEFSEDGLLLSAGG 295 Query: 311 DDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRPAGEDD 370 DD GRAEE +P +F GEPLTIAFNP YL DGL +LHS VT GFTTP+RPAVL P+G D Sbjct: 296 DDAGRAEEAVPAEFRGEPLTIAFNPGYLMDGLTALHSTSVTLGFTTPTRPAVLVPSG-DV 354 Query: 371 GANGGSGPFPAAKTDYVYLLMPVRLPG 397 SG F A +VY+LMPVR+PG Sbjct: 355 EVKESSGGFAALSGPFVYMLMPVRIPG 381 >tr|A4F5N3|A4F5N3_SACEN Tax_Id=405948 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 374 Score = 459 bits (1180), Expect = e-127 Identities = 238/389 (61%), Positives = 294/389 (75%), Gaps = 17/389 (4%) Query: 11 LKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTD-EGLTISGFDYEVSAEVKVSA 69 +K RV R+ ADAVAWVARSLP+RP +PVL GVLL + E LTISGFDYEVSA+V + A Sbjct: 1 MKIRVERDGLADAVAWVARSLPSRPPVPVLGGVLLDASSGEALTISGFDYEVSAQVTIDA 60 Query: 70 EIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAVEDYPALPA 129 I S G LVSGRLL+DITKALP +PVE++V+G+RV++TCGS+RFSLPT+ VEDYP LPA Sbjct: 61 SIDSTGRTLVSGRLLADITKALPNRPVEITVDGSRVTITCGSSRFSLPTMPVEDYPELPA 120 Query: 130 LPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDRFRLAVREL 189 +P+ G + DLF+EA+ QVAVAAG+DDTLPMLTG+R+EI+ + + + ATDRFRLA+RE Sbjct: 121 MPDHAGSVPGDLFSEAVSQVAVAAGKDDTLPMLTGVRMEINADRLTMVATDRFRLAMREF 180 Query: 190 TWVTTAGDVEAAVLVPAKTLAEAAKA-GTDGNQVHLALGSGASVGKDGLLGIRSEGKRST 248 TW + +VLVPAKTL+++AK GT GN+V ++L SG DGLLG+ +RST Sbjct: 181 TWEPGTTIEDTSVLVPAKTLSDSAKTLGTGGNKVEISLASG-----DGLLGLSGNSRRST 235 Query: 249 TRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSDDTLKLSA 308 TRLLDAEFPK+RQLLP+E A + VA L EAIKRV+LVA+RG Q+R+EFSD L+L+A Sbjct: 236 TRLLDAEFPKYRQLLPSESAVTAVVDVAPLVEAIKRVSLVAERGTQVRLEFSDAGLRLTA 295 Query: 309 GADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPAVLRPAGE 368 G DD G AEE+LPV+ GE LTIAFNP YL DGLG+L S+R FTT +RPAVL+P GE Sbjct: 296 GGDDEGSAEEELPVELVGEALTIAFNPAYLLDGLGALKSDRAQMLFTTSNRPAVLKPVGE 355 Query: 369 DDGANGGSGPFPAAKTDYVYLLMPVRLPG 397 D G Y+YLLMPVRLPG Sbjct: 356 DGEVAEG----------YLYLLMPVRLPG 374 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.316 0.133 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,208,295,956 Number of extensions: 138785967 Number of successful extensions: 426126 Number of sequences better than 10.0: 2522 Number of HSP's gapped: 422447 Number of HSP's successfully gapped: 2566 Length of query: 397 Length of database: 4,236,830,644 Length adjustment: 140 Effective length of query: 257 Effective length of database: 2,485,729,684 Effective search space: 638832528788 Effective search space used: 638832528788 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 82 (36.2 bits)