BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_0003
         (384 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|P0C561|RECF_MYCSM Tax_Id=1772 (recF)RecName: Full=DNA replica...   683   0.0  
sp|A0QND8|RECF_MYCS2 Tax_Id=246196 (recF)RecName: Full=DNA repli...   683   0.0  
sp|A3PSE0|RECF_MYCSJ Tax_Id=164757 (recF)RecName: Full=DNA repli...   574   e-162
sp|Q1BG58|RECF_MYCSS Tax_Id=164756 (recF)RecName: Full=DNA repli...   573   e-161
sp|A1U8S3|RECF_MYCSK Tax_Id=189918 (recF)RecName: Full=DNA repli...   573   e-161
sp|A4T4U1|RECF_MYCGI Tax_Id=350054 (recF)RecName: Full=DNA repli...   570   e-160
sp|A1T105|RECF_MYCVP Tax_Id=350058 (recF)RecName: Full=DNA repli...   559   e-157
sp|B2HI48|RECF_MYCMM Tax_Id=216594 (recF)RecName: Full=DNA repli...   523   e-146
tr|D5P9Z5|D5P9Z5_9MYCO Tax_Id=525368 (recF)SubName: Full=Recombi...   523   e-146
sp|A0PKB4|RECF_MYCUA Tax_Id=362242 (recF)RecName: Full=DNA repli...   522   e-146
sp|A0Q8R8|RECF_MYCA1 Tax_Id=243243 (recF)RecName: Full=DNA repli...   505   e-141
sp|Q9L7L5|RECF_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replica...   504   e-141
tr|B1ME43|B1ME43_MYCA9 Tax_Id=561007 (recF)RecName: Full=DNA rep...   503   e-140
sp|C1AJ00|RECF_MYCBT Tax_Id=561275 (recF)RecName: Full=DNA repli...   500   e-139
sp|Q7U314|RECF_MYCBO Tax_Id=1765 (recF)RecName: Full=DNA replica...   500   e-139
tr|A1KEE4|A1KEE4_MYCBP Tax_Id=410289 (recF_1)RecName: Full=DNA r...   500   e-139
tr|D6FC55|D6FC55_MYCTU Tax_Id=611303 SubName: Full=DNA replicati...   500   e-139
sp|Q59586|RECF_MYCTU Tax_Id=1773 (recF)RecName: Full=DNA replica...   499   e-139
sp|A5TY71|RECF_MYCTA Tax_Id=419947 (recF)RecName: Full=DNA repli...   499   e-139
tr|C6DQ78|C6DQ78_MYCTK Tax_Id=478434 RecName: Full=DNA replicati...   499   e-139
tr|A5WI57|A5WI57_MYCTF Tax_Id=336982 RecName: Full=DNA replicati...   499   e-139
tr|D6G7P9|D6G7P9_MYCTU Tax_Id=478435 SubName: Full=DNA replicati...   499   e-139
tr|D6FVB3|D6FVB3_MYCTU Tax_Id=611304 SubName: Full=DNA replicati...   499   e-139
tr|D6EZT8|D6EZT8_MYCTU Tax_Id=611302 SubName: Full=DNA replicati...   499   e-139
tr|D5ZB37|D5ZB37_MYCTU Tax_Id=537210 SubName: Full=DNA replicati...   499   e-139
tr|D5Z9F6|D5Z9F6_MYCTU Tax_Id=537209 SubName: Full=DNA replicati...   499   e-139
tr|D5YYK7|D5YYK7_MYCTU Tax_Id=515616 SubName: Full=Recombination...   499   e-139
tr|D5YM33|D5YM33_MYCTU Tax_Id=520140 SubName: Full=Recombination...   499   e-139
tr|D5YAJ2|D5YAJ2_MYCTU Tax_Id=520141 SubName: Full=Recombination...   499   e-139
tr|D5XPA1|D5XPA1_MYCTU Tax_Id=515617 SubName: Full=DNA replicati...   499   e-139
tr|A4KN35|A4KN35_MYCTU Tax_Id=395095 RecName: Full=DNA replicati...   499   e-139
tr|A2VMU5|A2VMU5_MYCTU Tax_Id=348776 RecName: Full=DNA replicati...   499   e-139
sp|P46391|RECF_MYCLE Tax_Id=1769 (recF)RecName: Full=DNA replica...   485   e-135
sp|B8ZTP0|RECF_MYCLB Tax_Id=561304 (recF)RecName: Full=DNA repli...   485   e-135
tr|D5PUU3|D5PUU3_COREQ Tax_Id=525370 (recF)SubName: Full=Recombi...   430   e-118
sp|Q0SAG4|RECF_RHOSR Tax_Id=101510 (recF)RecName: Full=DNA repli...   423   e-116
sp|C1B7T0|RECF_RHOOB Tax_Id=632772 (recF)RecName: Full=DNA repli...   422   e-116
tr|C6WCF7|C6WCF7_ACTMD Tax_Id=446462 RecName: Full=DNA replicati...   418   e-115
sp|C0ZLE4|RECF_RHOE4 Tax_Id=234621 (recF)RecName: Full=DNA repli...   417   e-114
tr|C3JLE2|C3JLE2_RHOER Tax_Id=596309 RecName: Full=DNA replicati...   415   e-114
sp|Q5Z3Z6|RECF_NOCFA Tax_Id=37329 (recF)RecName: Full=DNA replic...   409   e-112
sp|A4F5N5|RECF_SACEN Tax_Id=405948 (recF)RecName: Full=DNA repli...   397   e-108
tr|D5UPA7|D5UPA7_TSUPA Tax_Id=521096 SubName: Full=DNA replicati...   390   e-106
tr|C7MRN6|C7MRN6_SACVD Tax_Id=471857 RecName: Full=DNA replicati...   384   e-104
tr|D1ADA3|D1ADA3_THECD Tax_Id=471852 RecName: Full=DNA replicati...   379   e-103

>sp|P0C561|RECF_MYCSM Tax_Id=1772 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           smegmatis]
          Length = 384

 Score =  683 bits (1762), Expect = 0.0
 Identities = 356/384 (92%), Positives = 356/384 (92%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL
Sbjct: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE
Sbjct: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI
Sbjct: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA
Sbjct: 181 DTLEVWDGHLAAHGAALVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240

Query: 241 PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300
           PGPESVEFY                  GVCLVGPHRDDLELRLGDQPAKGFASHGESWSM
Sbjct: 241 PGPESVEFYEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300

Query: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360
           ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE
Sbjct: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360

Query: 361 DWDARRVEIRMVEDDGGRVSMVAS 384
           DWDARRVEIRMVEDDGGRVSMVAS
Sbjct: 361 DWDARRVEIRMVEDDGGRVSMVAS 384


>sp|A0QND8|RECF_MYCS2 Tax_Id=246196 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           smegmatis]
          Length = 384

 Score =  683 bits (1762), Expect = 0.0
 Identities = 356/384 (92%), Positives = 356/384 (92%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL
Sbjct: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE
Sbjct: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI
Sbjct: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA
Sbjct: 181 DTLEVWDGHLAAHGAALVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240

Query: 241 PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300
           PGPESVEFY                  GVCLVGPHRDDLELRLGDQPAKGFASHGESWSM
Sbjct: 241 PGPESVEFYEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300

Query: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360
           ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE
Sbjct: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360

Query: 361 DWDARRVEIRMVEDDGGRVSMVAS 384
           DWDARRVEIRMVEDDGGRVSMVAS
Sbjct: 361 DWDARRVEIRMVEDDGGRVSMVAS 384


>sp|A3PSE0|RECF_MYCSJ Tax_Id=164757 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium sp.]
          Length = 380

 Score =  574 bits (1480), Expect = e-162
 Identities = 295/384 (76%), Positives = 325/384 (84%), Gaps = 4/384 (1%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF RHL LTDFRSWAR DL+LEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVA+DAPL
Sbjct: 1   MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGA RA+VSTIVVNEGRELAVDLEIT+GRANKARLNRSPVRS RE+LGVLRAVLF+PE
Sbjct: 61  IRAGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDPG+RRRYLDELATTRRP++AGVRADYD+V+RQRTALLK+AAGARYRGDRSV+
Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           +TL+VWD          +A+R  LV  L PEVEKAYQLLAP SRPAAIRYR+S++A +D 
Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240

Query: 241 PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300
               S E+Y                  GVCLVGPHRDDLELRLGDQ AKG+ASHGESWSM
Sbjct: 241 ----SAEYYEAALLDAMTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWSM 296

Query: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360
           AL+LRL AYELL +DG +PVLLLDDVFAELD +RRRALA VA SAEQVLVTAAV EDIP 
Sbjct: 297 ALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIPA 356

Query: 361 DWDARRVEIRMVEDDGGRVSMVAS 384
           DWDARR+ IRM +DD GRVSMV S
Sbjct: 357 DWDARRIVIRMQDDDDGRVSMVES 380


>sp|Q1BG58|RECF_MYCSS Tax_Id=164756 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium sp.]
          Length = 380

 Score =  573 bits (1476), Expect = e-161
 Identities = 294/384 (76%), Positives = 324/384 (84%), Gaps = 4/384 (1%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF RHL LTDFRSWAR DL+LEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVA+DAPL
Sbjct: 1   MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR GA RA+VSTIVVNEGRELAVDLEIT+GRANKARLNRSPVRS RE+LGVLRAVLF+PE
Sbjct: 61  IRVGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDPG+RRRYLDELATTRRP++AGVRADYD+V+RQRTALLK+AAGARYRGDRSV+
Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           +TL+VWD          +A+R  LV  L PEVEKAYQLLAP SRPAAIRYR+S++A +D 
Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240

Query: 241 PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300
               S E+Y                  GVCLVGPHRDDLELRLGDQ AKG+ASHGESWSM
Sbjct: 241 ----SAEYYEAALLDAMTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWSM 296

Query: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360
           AL+LRL AYELL +DG +PVLLLDDVFAELD +RRRALA VA SAEQVLVTAAV EDIP 
Sbjct: 297 ALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIPA 356

Query: 361 DWDARRVEIRMVEDDGGRVSMVAS 384
           DWDARR+ IRM +DD GRVSMV S
Sbjct: 357 DWDARRIMIRMQDDDDGRVSMVES 380


>sp|A1U8S3|RECF_MYCSK Tax_Id=189918 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium sp.]
          Length = 380

 Score =  573 bits (1476), Expect = e-161
 Identities = 294/384 (76%), Positives = 324/384 (84%), Gaps = 4/384 (1%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF RHL LTDFRSWAR DL+LEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVA+DAPL
Sbjct: 1   MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR GA RA+VSTIVVNEGRELAVDLEIT+GRANKARLNRSPVRS RE+LGVLRAVLF+PE
Sbjct: 61  IRVGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDPG+RRRYLDELATTRRP++AGVRADYD+V+RQRTALLK+AAGARYRGDRSV+
Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           +TL+VWD          +A+R  LV  L PEVEKAYQLLAP SRPAAIRYR+S++A +D 
Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240

Query: 241 PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300
               S E+Y                  GVCLVGPHRDDLELRLGDQ AKG+ASHGESWSM
Sbjct: 241 ----SAEYYEAALLDAMTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWSM 296

Query: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360
           AL+LRL AYELL +DG +PVLLLDDVFAELD +RRRALA VA SAEQVLVTAAV EDIP 
Sbjct: 297 ALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIPA 356

Query: 361 DWDARRVEIRMVEDDGGRVSMVAS 384
           DWDARR+ IRM +DD GRVSMV S
Sbjct: 357 DWDARRIMIRMQDDDDGRVSMVES 380


>sp|A4T4U1|RECF_MYCGI Tax_Id=350054 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           gilvum]
          Length = 389

 Score =  570 bits (1469), Expect = e-160
 Identities = 292/385 (75%), Positives = 324/385 (84%), Gaps = 2/385 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHL LTDFRSW+RV+L+L PGRTVFVGPNGFGKTNLVEALWYSATLGSHRVA+DAPL
Sbjct: 1   MYVRHLALTDFRSWSRVELELSPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGAERA+VSTI+VNEGRELAVDL+ITSGRANKARLNRSPVRSAREILGVLRAVLF+PE
Sbjct: 61  IRAGAERAVVSTIIVNEGRELAVDLDITSGRANKARLNRSPVRSAREILGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDPGDRRRYLDELATTRRP +A VRADYDKVVRQRTALLKTA+ AR+RGDR  +
Sbjct: 121 DLALVRGDPGDRRRYLDELATTRRPRIAAVRADYDKVVRQRTALLKTASSARFRGDRGAL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAI--E 238
           +TL+VWD          +A+RV LV EL PEVEKAYQLLAPASRPA +RYRS VE +  E
Sbjct: 181 ETLDVWDGHLAAHGAQLIAARVDLVHELAPEVEKAYQLLAPASRPATVRYRSGVEVVEAE 240

Query: 239 DAPGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESW 298
            A G    E +                  GVCLVGPHRDDLELRLGDQPAKGFASHGESW
Sbjct: 241 AAAGNSDPEVFEAALLDALSRRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESW 300

Query: 299 SMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDI 358
           SMAL+LRL AYELL +DG +PVLLLDDVFAELD++RR+ALA VA SAEQVLVTAAVGEDI
Sbjct: 301 SMALSLRLAAYELLRADGSDPVLLLDDVFAELDSARRQALAQVAASAEQVLVTAAVGEDI 360

Query: 359 PEDWDARRVEIRMVEDDGGRVSMVA 383
           P DWDARR+EI M + D GRVS+++
Sbjct: 361 PVDWDARRIEIAMTDSDLGRVSVLS 385


>sp|A1T105|RECF_MYCVP Tax_Id=350058 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           vanbaalenii]
          Length = 386

 Score =  559 bits (1440), Expect = e-157
 Identities = 287/384 (74%), Positives = 322/384 (83%), Gaps = 2/384 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHL LTDFRSWARV+L+LEPGRTVFVG NGFGKTNL+EALWYSATLGSHRVA+DAPL
Sbjct: 1   MYVRHLALTDFRSWARVELELEPGRTVFVGSNGFGKTNLIEALWYSATLGSHRVASDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGAERA+VSTIVVN+GRELAVDL+ITSGRANKARLNRSPVRSAREILGVLRAVLF+PE
Sbjct: 61  IRAGAERAVVSTIVVNDGRELAVDLDITSGRANKARLNRSPVRSAREILGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDPG+RRRYLDELATTRRP +A VRADYDKVVRQRTALLKTA+GARYRGDR  +
Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPRIAAVRADYDKVVRQRTALLKTASGARYRGDRGAL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAI--E 238
           +TL+VW+          +++RV+LV EL PEVEKAYQLLAP SRPAAIRYRS V+ +  E
Sbjct: 181 ETLDVWNGHLASHGAQLISARVQLVNELAPEVEKAYQLLAPGSRPAAIRYRSGVDVVEAE 240

Query: 239 DAPGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESW 298
            A G    E +                  GVCLVGPHRDDLELRLGDQ AKGFASHGESW
Sbjct: 241 AAAGNSDEEMFEAALLDALSRRRDAELERGVCLVGPHRDDLELRLGDQVAKGFASHGESW 300

Query: 299 SMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDI 358
           SMALALRL AYELL  +G +PVLLLDDVFAELD++RR+ALA VA +AEQVLVTAAV EDI
Sbjct: 301 SMALALRLAAYELLRVEGSDPVLLLDDVFAELDSARRQALAQVAATAEQVLVTAAVEEDI 360

Query: 359 PEDWDARRVEIRMVEDDGGRVSMV 382
           P +WDARR+ I M + DGGR+S+V
Sbjct: 361 PAEWDARRIGITMQDSDGGRISVV 384


>sp|B2HI48|RECF_MYCMM Tax_Id=216594 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           marinum]
          Length = 385

 Score =  523 bits (1346), Expect = e-146
 Identities = 271/386 (70%), Positives = 307/386 (79%), Gaps = 3/386 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA  DL+L PGRTVFVGPNGFGKTN++EALWYSATLGSHRV TDAPL
Sbjct: 1   MYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGA+RA++STIVVN+GRE AVDLEI +GRANKARLNRSPVRS RE++GVLRAVLF+PE
Sbjct: 61  IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDP DRRRYLD+LAT RRP +AGVRADYDKV+RQRTALLK+ +GAR+RGDR  +
Sbjct: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAI--E 238
           DTL+VWD          +A+R+ LV  L PEVEKAYQLLAP SR AAI YR+S++A    
Sbjct: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRASMDAFVAA 240

Query: 239 DAPGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESW 298
           D   P+ V                     GVCLVGPHRDDLELRLGDQPAKGFASHGESW
Sbjct: 241 DDAAPDRVTL-EEGLLAALAARRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESW 299

Query: 299 SMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDI 358
           SMA+ALRL A+ LL +DG EPVLLLDDVFAELD +RR ALA VA SAEQVLVTAAV EDI
Sbjct: 300 SMAVALRLAAFALLRADGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDI 359

Query: 359 PEDWDARRVEIRMVEDDGGRVSMVAS 384
           P  WDAR+V I + +   GRVS+V S
Sbjct: 360 PSGWDARKVHIDLRDSADGRVSVVQS 385


>tr|D5P9Z5|D5P9Z5_9MYCO Tax_Id=525368 (recF)SubName:
           Full=Recombination protein F;[Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 385

 Score =  523 bits (1346), Expect = e-146
 Identities = 273/383 (71%), Positives = 307/383 (80%), Gaps = 1/383 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA  DL+LEPGRTVFVG NGFGKTNLVEALW+SATLGSHRV +D PL
Sbjct: 1   MYVRHLGLRDFRSWAHADLELEPGRTVFVGSNGFGKTNLVEALWFSATLGSHRVGSDTPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGA+RA+VSTIVVNEGRE AVDLEI +GRANKARLNRSPVRS RE++GVLRAVLF+PE
Sbjct: 61  IRAGADRAVVSTIVVNEGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDP +RRRYLD+LAT RRPA+AGVRADYDKV+RQRTALLK+AAG R+R DR  +
Sbjct: 121 DLALVRGDPAERRRYLDDLATVRRPAVAGVRADYDKVLRQRTALLKSAAGMRHRADRGAL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEA-IED 239
           DTL+VWD          +A+R+ LV +L PEVEKAYQLLAPASRPA+I YRSS+ A +  
Sbjct: 181 DTLDVWDSRLAEHGAELMAARIDLVNQLTPEVEKAYQLLAPASRPASIAYRSSLGAQLAA 240

Query: 240 APGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299
             G    EF                   G+CLVGPHRDDLEL LGDQPAKGFASHGESWS
Sbjct: 241 DGGGHDREFLEAALLAALAERRDAELERGMCLVGPHRDDLELWLGDQPAKGFASHGESWS 300

Query: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359
            A+ALRL AYELL +DG EPVLLLDDVFAELD +RRRALATVA +AEQVLVTAAV EDIP
Sbjct: 301 FAVALRLAAYELLRADGSEPVLLLDDVFAELDAARRRALATVAEAAEQVLVTAAVVEDIP 360

Query: 360 EDWDARRVEIRMVEDDGGRVSMV 382
             W AR+V I + + D GRVS V
Sbjct: 361 AGWAARQVYIDLRDGDLGRVSAV 383


>sp|A0PKB4|RECF_MYCUA Tax_Id=362242 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           ulcerans]
          Length = 385

 Score =  522 bits (1344), Expect = e-146
 Identities = 271/386 (70%), Positives = 306/386 (79%), Gaps = 3/386 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA  DL+L PGRTVFVGPNGFGKTN++EALWYSATLGSHRV TDAPL
Sbjct: 1   MYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGA+RA++STIVVN+GRE AVDLEI +GRANKARLNRSPVRS RE++GVLRAVLF+PE
Sbjct: 61  IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDP DRRRYLD+LAT RRP +AGVRADYDKV+RQRTALLK+ +GAR+RGDR  +
Sbjct: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAI--E 238
           DTL+VWD          +A+R+ LV  L PEVEKAYQLLAP SR AAI YR+S++A    
Sbjct: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRASMDAFVAA 240

Query: 239 DAPGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESW 298
           D   P+ V                     GVCLVGPHRDDLELRLGDQPAKGFASHGESW
Sbjct: 241 DDAAPDRVAL-EEGLLAALAARRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESW 299

Query: 299 SMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDI 358
           SMA+ALRL A+ LL +DG EPVLLLDDVFAELD +RR ALA VA SAEQVLVTAAV EDI
Sbjct: 300 SMAVALRLAAFALLRADGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDI 359

Query: 359 PEDWDARRVEIRMVEDDGGRVSMVAS 384
           P  WDAR+V I + +   GRVS V S
Sbjct: 360 PSGWDARKVHIDLRDSADGRVSAVQS 385


>sp|A0Q8R8|RECF_MYCA1 Tax_Id=243243 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           avium]
          Length = 385

 Score =  505 bits (1300), Expect = e-141
 Identities = 261/381 (68%), Positives = 301/381 (79%), Gaps = 1/381 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA  DL+L+PGRTVF+G NGFGKTNL+EALWYS+TLGSHRV TDAPL
Sbjct: 1   MYVRHLGLRDFRSWAHADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGA+R +VSTIVVN+GRE AVDLEI +GRANKARLNRSPVRS RE+LGVLRAVLF+PE
Sbjct: 61  IRAGADRTVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDP +RRRYLD+LAT RRPA+A VRADYDKV+RQRTALLK+ +GAR+RGDR  +
Sbjct: 121 DLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGARHRGDRGAL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTL+VWD          +A+R+ LV +L PEVEKAYQLLAP SR A+I YRSS+ A   A
Sbjct: 181 DTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRSSLGAAAAA 240

Query: 241 P-GPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299
                  ++                   GVCLVGPHRDDLEL LG+Q AKGFASHGESWS
Sbjct: 241 EVNAGDRDYLEAALLAGLAARRYAELERGVCLVGPHRDDLELWLGEQVAKGFASHGESWS 300

Query: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359
           +AL+LRL AYELL +D  +PVLLLDDVFAELD +RRRALA VA SAEQVLVTAAV EDIP
Sbjct: 301 LALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALAAVAESAEQVLVTAAVLEDIP 360

Query: 360 EDWDARRVEIRMVEDDGGRVS 380
             W ARR+ + + + D GRVS
Sbjct: 361 AGWQARRLFVELRDTDAGRVS 381


>sp|Q9L7L5|RECF_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           paratuberculosis]
          Length = 385

 Score =  504 bits (1299), Expect = e-141
 Identities = 260/381 (68%), Positives = 302/381 (79%), Gaps = 1/381 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA  DL+L+PGRTVF+G NGFGKTNL+EALWYS+TLGSHRV TDAPL
Sbjct: 1   MYVRHLGLRDFRSWAHADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGA+RA+VSTIVVN+GRE AVDLEI +GRANKARLNRSPVRS RE+LGVLRAVLF+PE
Sbjct: 61  IRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDP +RRRYLD+LAT RRPA+A VRADYDKV+RQRTALLK+ +GAR+RGDR  +
Sbjct: 121 DLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGARHRGDRGAL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTL+VWD          +A+R+ LV +L PEVEKAYQLLAP SR A+I YRSS+ A   A
Sbjct: 181 DTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRSSLGAAASA 240

Query: 241 P-GPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299
                  ++                   G+CLVGPHRDDLEL LG+Q AKGFASHGESWS
Sbjct: 241 EVNAGDRDYLEAALLAGLAAHRDAELERGMCLVGPHRDDLELWLGEQVAKGFASHGESWS 300

Query: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359
           +AL+LRL A+ELL +D  +PVLLLDDVFAELD +RRRALA VA SAEQVLVTAAV EDIP
Sbjct: 301 LALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALAAVAESAEQVLVTAAVLEDIP 360

Query: 360 EDWDARRVEIRMVEDDGGRVS 380
             W ARR+ + + + D GRVS
Sbjct: 361 TGWQARRLFVELRDTDAGRVS 381


>tr|B1ME43|B1ME43_MYCA9 Tax_Id=561007 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           abscessus]
          Length = 401

 Score =  503 bits (1294), Expect = e-140
 Identities = 262/382 (68%), Positives = 303/382 (79%), Gaps = 4/382 (1%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           ++ R LGL DFRSW RV+L+LEPGRTVFVGPNG+GKTNLVEALWYS+TLGSHRVATDAPL
Sbjct: 20  VYVRQLGLRDFRSWERVNLELEPGRTVFVGPNGYGKTNLVEALWYSSTLGSHRVATDAPL 79

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR GAERA+VSTIVVN+GRELA+DLEI +GRANKAR+NRSPVRS RE+LG+L AVLF+PE
Sbjct: 80  IRTGAERAVVSTIVVNDGRELAIDLEIAAGRANKARVNRSPVRSPREVLGILHAVLFAPE 139

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTA-AGARYRGDRSV 179
           DLSLVRGDP DRRR+LD+L   RRP +AGVRADYDKV+RQRTALLKTA A  R R D+SV
Sbjct: 140 DLSLVRGDPADRRRFLDDLLIQRRPRMAGVRADYDKVLRQRTALLKTAMAALRQRHDQSV 199

Query: 180 IDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIED 239
           +DTL+VWD          +++R++LV EL P VEK+YQLLAPASRPA I YRSSVE +E 
Sbjct: 200 LDTLDVWDGHLVAHGAELLSARIELVGELHPLVEKSYQLLAPASRPADIAYRSSVEGVE- 258

Query: 240 APGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299
                SVE                    GVCLVGPHRDDLELRLGD PAKGFASHGESWS
Sbjct: 259 --AGLSVEHLADALQAGLVAKRSAEIERGVCLVGPHRDDLELRLGDGPAKGFASHGESWS 316

Query: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359
            ALALRL A++LL +DG +PVL+LDDVFAELD +RRR+LATVA  AEQVLVTAAV +D+P
Sbjct: 317 FALALRLAAFDLLRADGTDPVLMLDDVFAELDGARRRSLATVAADAEQVLVTAAVPDDVP 376

Query: 360 EDWDARRVEIRMVEDDGGRVSM 381
           E+  AR V + + E   GR S+
Sbjct: 377 EELSARTVTVEVQEGPAGRKSV 398


>sp|C1AJ00|RECF_MYCBT Tax_Id=561275 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           bovis]
          Length = 385

 Score =  500 bits (1288), Expect = e-139
 Identities = 261/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++VVRQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>sp|Q7U314|RECF_MYCBO Tax_Id=1765 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           bovis]
          Length = 385

 Score =  500 bits (1288), Expect = e-139
 Identities = 261/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++VVRQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|A1KEE4|A1KEE4_MYCBP Tax_Id=410289 (recF_1)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           bovis]
          Length = 385

 Score =  500 bits (1288), Expect = e-139
 Identities = 261/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++VVRQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D6FC55|D6FC55_MYCTU Tax_Id=611303 SubName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis
           CPHL_A]
          Length = 385

 Score =  500 bits (1287), Expect = e-139
 Identities = 260/387 (67%), Positives = 297/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D+PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADSPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>sp|Q59586|RECF_MYCTU Tax_Id=1773 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           tuberculosis]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>sp|A5TY71|RECF_MYCTA Tax_Id=419947 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           tuberculosis]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|C6DQ78|C6DQ78_MYCTK Tax_Id=478434 RecName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|A5WI57|A5WI57_MYCTF Tax_Id=336982 RecName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D6G7P9|D6G7P9_MYCTU Tax_Id=478435 SubName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis KZN
           605]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D6FVB3|D6FVB3_MYCTU Tax_Id=611304 SubName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis K85]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D6EZT8|D6EZT8_MYCTU Tax_Id=611302 SubName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis T46]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D5ZB37|D5ZB37_MYCTU Tax_Id=537210 SubName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis T17]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D5Z9F6|D5Z9F6_MYCTU Tax_Id=537209 SubName: Full=DNA replication
           and repair protein recF (Single-strand DNA binding
           protein);[Mycobacterium tuberculosis GM 1503]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D5YYK7|D5YYK7_MYCTU Tax_Id=515616 SubName: Full=Recombination
           protein F;[Mycobacterium tuberculosis 02_1987]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D5YM33|D5YM33_MYCTU Tax_Id=520140 SubName: Full=Recombination
           protein F;[Mycobacterium tuberculosis EAS054]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D5YAJ2|D5YAJ2_MYCTU Tax_Id=520141 SubName: Full=Recombination
           protein F;[Mycobacterium tuberculosis T85]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|D5XPA1|D5XPA1_MYCTU Tax_Id=515617 SubName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis T92]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|A4KN35|A4KN35_MYCTU Tax_Id=395095 RecName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>tr|A2VMU5|A2VMU5_MYCTU Tax_Id=348776 RecName: Full=DNA replication
           and repair protein recF;[Mycobacterium tuberculosis C]
          Length = 385

 Score =  499 bits (1285), Expect = e-139
 Identities = 260/387 (67%), Positives = 296/387 (76%), Gaps = 9/387 (2%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHLGL DFRSWA VDL+L PGRTVFVGPNG+GKTNL+EALWYS TLGSHRV+ D PL
Sbjct: 1   MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G +RA++STIVVN+GRE AVDLEI +GR NKARLNRS VRS R+++GVLRAVLF+PE
Sbjct: 61  IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL LVRGDP DRRRYLD+LA  RRPA+A VRA+Y++V+RQRTALLK+  GARYRGDR V 
Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTLEVWD          VA+R+ LV +L PEV+KAYQLLAP SR A+I YR+S+    D 
Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASM----DV 236

Query: 241 PGPESV-----EFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
            GP        +                    GVCLVGPHRDDL LRLGDQPAKGFASHG
Sbjct: 237 TGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHG 296

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           E+WS+A+ALRL AY+LL  DG EPVLLLDDVFAELD  RRRALAT A SAEQVLVTAAV 
Sbjct: 297 EAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVL 356

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMV 382
           EDIP  WDARRV I +  DD G +S+V
Sbjct: 357 EDIPAGWDARRVHIDVRADDTGSMSVV 383


>sp|P46391|RECF_MYCLE Tax_Id=1769 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           leprae]
          Length = 385

 Score =  485 bits (1249), Expect = e-135
 Identities = 253/383 (66%), Positives = 292/383 (76%), Gaps = 1/383 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RH GL DFRSW  VDL+L PGRTVF GPNG GKTNL+EALWYS TL SHRV TD PL
Sbjct: 1   MYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAG  RAIVSTIVVNEGRE A+DLEI +GRAN+ARLNRS VR  RE++GVLRAVLF+PE
Sbjct: 61  IRAGTIRAIVSTIVVNEGRECAIDLEIAAGRANRARLNRSLVRGMREVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LV GDP +RRRYLD+LAT R+P +A VRADYDKV+RQRTALLK+ A ARYR D+ V+
Sbjct: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTL+VWD          +A+R+ LV +L PEVEKAYQLLAP SR A+I YR+S++    A
Sbjct: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240

Query: 241 -PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299
             G                         G+CLVGPHRD+LELRLGDQPAKGFASHGESWS
Sbjct: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300

Query: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359
           +A+ALRL AYELL +DG EPVLLLDDVFAELD +R RALATVA SAEQVLVT+A  EDIP
Sbjct: 301 LAIALRLAAYELLRADGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360

Query: 360 EDWDARRVEIRMVEDDGGRVSMV 382
             WDA+ V + + + D GRVS+V
Sbjct: 361 VGWDAKWVTVDLRDSDSGRVSVV 383


>sp|B8ZTP0|RECF_MYCLB Tax_Id=561304 (recF)RecName: Full=DNA
           replication and repair protein recF;[Mycobacterium
           leprae]
          Length = 385

 Score =  485 bits (1249), Expect = e-135
 Identities = 253/383 (66%), Positives = 292/383 (76%), Gaps = 1/383 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RH GL DFRSW  VDL+L PGRTVF GPNG GKTNL+EALWYS TL SHRV TD PL
Sbjct: 1   MYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAG  RAIVSTIVVNEGRE A+DLEI +GRAN+ARLNRS VR  RE++GVLRAVLF+PE
Sbjct: 61  IRAGTIRAIVSTIVVNEGRECAIDLEIAAGRANRARLNRSLVRGMREVVGVLRAVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LV GDP +RRRYLD+LAT R+P +A VRADYDKV+RQRTALLK+ A ARYR D+ V+
Sbjct: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
           DTL+VWD          +A+R+ LV +L PEVEKAYQLLAP SR A+I YR+S++    A
Sbjct: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240

Query: 241 -PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299
             G                         G+CLVGPHRD+LELRLGDQPAKGFASHGESWS
Sbjct: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300

Query: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359
           +A+ALRL AYELL +DG EPVLLLDDVFAELD +R RALATVA SAEQVLVT+A  EDIP
Sbjct: 301 LAIALRLAAYELLRADGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360

Query: 360 EDWDARRVEIRMVEDDGGRVSMV 382
             WDA+ V + + + D GRVS+V
Sbjct: 361 VGWDAKWVTVDLRDSDSGRVSVV 383


>tr|D5PUU3|D5PUU3_COREQ Tax_Id=525370 (recF)SubName:
           Full=Recombination protein F;[Rhodococcus equi ATCC
           33707]
          Length = 408

 Score =  430 bits (1106), Expect = e-118
 Identities = 226/397 (56%), Positives = 279/397 (70%), Gaps = 13/397 (3%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF R   L DFRSW  V +DLEPG TVFVG NG GKTNL+EAL Y +TL SHRV++DAPL
Sbjct: 1   MFVRKFSLRDFRSWDAVTVDLEPGCTVFVGRNGHGKTNLLEALGYLSTLSSHRVSSDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IRAGA +A    ++ N GREL +D+EI  G+AN+AR+N+SP R  REI+G+L+ VLF+PE
Sbjct: 61  IRAGAPQAYAGALIANHGRELGIDIEINDGKANRARINQSPARRPREIVGILQTVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDR--- 177
           DLSLVRGDPGDRRR+LDEL T RRP +AGVRADYDKV+RQR+ALLKTA GA  RG R   
Sbjct: 121 DLSLVRGDPGDRRRFLDELLTARRPRMAGVRADYDKVLRQRSALLKTAGGALRRGARSSD 180

Query: 178 --SVIDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSV- 234
             S + TL++WD          +ASR++LV +L P +  +Y+ LAP SRPA++RY+SS+ 
Sbjct: 181 GASALATLDIWDGHLAAHGAQLLASRLRLVHDLAPHLVASYRSLAPESRPASVRYKSSLG 240

Query: 235 -----EAIEDA--PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQP 287
                E ++    P P+ VE                    GVCLVGPHRDDLEL LGDQP
Sbjct: 241 TSLPTELLDPTREPEPDDVELLEVSFLNELSEMRQREIERGVCLVGPHRDDLELILGDQP 300

Query: 288 AKGFASHGESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQ 347
           AKGFASHGESWS AL++RLGA+ LL  DG +PVL+LDDVFAELD  RR ALA VA  AEQ
Sbjct: 301 AKGFASHGESWSFALSMRLGAFFLLRDDGSDPVLMLDDVFAELDRKRRAALAGVAAQAEQ 360

Query: 348 VLVTAAVGEDIPEDWDARRVEIRMVEDDGGRVSMVAS 384
           VL+TAAV ED+P +  A R  +   + + GR+S + +
Sbjct: 361 VLITAAVAEDVPAELSATRFGVEAHDTERGRLSQLTA 397


>sp|Q0SAG4|RECF_RHOSR Tax_Id=101510 (recF)RecName: Full=DNA
           replication and repair protein recF;[Rhodococcus sp.]
          Length = 410

 Score =  423 bits (1087), Expect = e-116
 Identities = 231/400 (57%), Positives = 274/400 (68%), Gaps = 18/400 (4%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF R L L DFRSW  + L L PG TVFVGPNG GKTN++EAL Y +TL SHRV++DAPL
Sbjct: 1   MFVRALSLRDFRSWDALGLTLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G  +A     VVN GREL VDLE+  G++N+AR+N+SP R  REILG+L+ VLF+PE
Sbjct: 61  IRTGTGQAFAGATVVNAGRELTVDLELNEGKSNRARINQSPTRRPREILGILQTVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDR--- 177
           DLSLVRGDPGDRRRYLDEL T+R P +A VRADYD+V+RQR+ALLKTA GA  R  R   
Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDRVLRQRSALLKTAGGALRRVSRGSG 180

Query: 178 -------SVIDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRY 230
                  S + TLEVWD          +A R+ LV +L P + ++YQ LAP SRPA+IRY
Sbjct: 181 RPSEDGASALATLEVWDGHLAAHGAQLLAGRLHLVHDLAPHLAESYQSLAPESRPASIRY 240

Query: 231 RSSV------EAIEDAPGPES--VEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELR 282
           RSS+      E  E A  PE+  + F                   GVCLVGPHRDDLEL 
Sbjct: 241 RSSLGSSLPPEFTEPARVPEAGDIAFLEERFLQELSVMRSKEIERGVCLVGPHRDDLELH 300

Query: 283 LGDQPAKGFASHGESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVA 342
           LGD PAKGFASHGESWS AL+LRL  + LL SDG +PVL+LDDVFAELD  RRRALA VA
Sbjct: 301 LGDTPAKGFASHGESWSFALSLRLAGFALLRSDGSDPVLMLDDVFAELDRRRRRALAKVA 360

Query: 343 GSAEQVLVTAAVGEDIPEDWDARRVEIRMVEDDGGRVSMV 382
             AEQVL+TAAV ED+PE+ DA R  +   + D GR+S +
Sbjct: 361 LDAEQVLITAAVPEDVPEELDAVRFGVEARDTDRGRISHI 400


>sp|C1B7T0|RECF_RHOOB Tax_Id=632772 (recF)RecName: Full=DNA
           replication and repair protein recF;[Rhodococcus opacus]
          Length = 410

 Score =  422 bits (1084), Expect = e-116
 Identities = 228/400 (57%), Positives = 274/400 (68%), Gaps = 18/400 (4%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF R L L DFRSW  + L+L PG TVFVGPNG GKTN++EAL Y +TL SHRV++DAPL
Sbjct: 1   MFVRALSLRDFRSWDALGLNLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G  +A     VVN GREL VDLE+  G++N+AR+N+SP R  REILG+L+ VLF+PE
Sbjct: 61  IRTGTAQAFAGATVVNTGRELTVDLELNEGKSNRARINQSPTRRPREILGILQTVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDR--- 177
           DLSLVRGDPGDRRRYLDEL T+R P +A VRADY++V+RQR+ALLKTA GA  R  R   
Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYERVLRQRSALLKTAGGALRRSSRGGG 180

Query: 178 -------SVIDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRY 230
                  S + TLEVWD          +A R+ LV +L P + ++YQ LAP SRPA+IRY
Sbjct: 181 RPSEDGASALATLEVWDGHLAAHGAQLLAGRLHLVHDLAPHLAESYQSLAPESRPASIRY 240

Query: 231 RSSV------EAIEDAPGPES--VEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELR 282
           RSS+      E    A  PE+  + F                   GVCLVGPHRDDLEL 
Sbjct: 241 RSSLGSSLPPEFTAPARAPEAGDIAFLEERFLQELSVMRSKEIERGVCLVGPHRDDLELH 300

Query: 283 LGDQPAKGFASHGESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVA 342
           LGD PAKGFASHGESWS AL+LRL  + LL +DG +PVL+LDDVFAELD  RRRALA VA
Sbjct: 301 LGDTPAKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRKRRRALAKVA 360

Query: 343 GSAEQVLVTAAVGEDIPEDWDARRVEIRMVEDDGGRVSMV 382
             AEQVL+TAAV ED+PE+ DA R  +   + D GR+S +
Sbjct: 361 LDAEQVLITAAVPEDVPEELDAVRFGVEARDTDRGRISHI 400


>tr|C6WCF7|C6WCF7_ACTMD Tax_Id=446462 RecName: Full=DNA replication
           and repair protein recF;[Actinosynnema mirum]
          Length = 371

 Score =  418 bits (1075), Expect = e-115
 Identities = 222/369 (60%), Positives = 260/369 (70%), Gaps = 6/369 (1%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHL +TDFRSW   DL  EPG  V VG NG GKTNLVEAL Y ATLGSHRVA+DAPL
Sbjct: 1   MYVRHLQVTDFRSWEHADLAFEPGVNVLVGRNGHGKTNLVEALGYVATLGSHRVASDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR+GA+RA+V T VVNEGREL V+LEIT GRAN+AR+NR PV   R++LG+LR VLF+PE
Sbjct: 61  IRSGAQRAVVRTAVVNEGRELLVELEITPGRANRARVNRGPVPRPRDVLGILRTVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DLSLVRGDPG+RRR+LDEL T R P  AGVR+DY++V+RQR ALLKT    R     + +
Sbjct: 121 DLSLVRGDPGERRRFLDELLTLRAPRYAGVRSDYERVLRQRGALLKTVRSVR----SAEL 176

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240
            TL+VWD          +A+R+ LV  + P    AY  +AP SRPA + YRSS+   E  
Sbjct: 177 GTLDVWDGHLAKHGAELLAARLDLVAAIAPHAAAAYAEVAPESRPALLSYRSSLG--EAF 234

Query: 241 PGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM 300
           PG    E                    GVCLVGPHRDDLEL LG+ PAKG+ASHGESWS 
Sbjct: 235 PGTHDREVLEDALLAELHRLRPQEIDRGVCLVGPHRDDLELSLGELPAKGYASHGESWSF 294

Query: 301 ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIPE 360
           ALALRLGAYELL  +G EPVL+LDDVFAELD  RRR LA VA +AEQV +TAAV ED+PE
Sbjct: 295 ALALRLGAYELLREEGAEPVLVLDDVFAELDRGRRRQLAKVAAAAEQVFITAAVAEDVPE 354

Query: 361 DWDARRVEI 369
           + DA R  +
Sbjct: 355 ELDAARFHV 363


>sp|C0ZLE4|RECF_RHOE4 Tax_Id=234621 (recF)RecName: Full=DNA
           replication and repair protein recF;[Rhodococcus
           erythropolis]
          Length = 409

 Score =  417 bits (1071), Expect = e-114
 Identities = 215/395 (54%), Positives = 276/395 (69%), Gaps = 13/395 (3%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF R   L DFRSW  + LDL PG TVF+G NG GKTN++E+L Y +TL SHRV+TDAP+
Sbjct: 1   MFVRRFSLRDFRSWDSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSTDAPM 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR+G+  A     VVN GREL +D+E+  G++N+AR+N+SP R  RE+LG+L++V+F+PE
Sbjct: 61  IRSGSASAFAGATVVNNGRELTIDVELIEGKSNRARINQSPTRRPREVLGILQSVMFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDR--- 177
           DLSLVRGDPGDRRRYLDEL T+R P +A VRADYDKV+RQR+ALLKTA  A  RG R   
Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDKVLRQRSALLKTAGAALRRGSRGGE 180

Query: 178 --SVIDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVE 235
             +V+ TLEVWD          +A R++LV +L P + ++Y+ +AP SRPA+IRY+SS+ 
Sbjct: 181 SDNVLSTLEVWDGHLAAHGAQLLAGRLELVHDLAPHLAESYRSIAPESRPASIRYKSSLG 240

Query: 236 AIED--------APGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQP 287
           +  D          G + V +                   GVCLVGPHRDDLEL LGD P
Sbjct: 241 SSLDPEFTDPARISGIDDVAYLEERFHLELAQMRSKEIDRGVCLVGPHRDDLELVLGDSP 300

Query: 288 AKGFASHGESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQ 347
           AKGFASHGESWS AL+LRL  + LL +DG +PVL+LDDVFAELD  RRRALATVA +AEQ
Sbjct: 301 AKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRRRRRALATVAATAEQ 360

Query: 348 VLVTAAVGEDIPEDWDARRVEIRMVEDDGGRVSMV 382
           VL+TAAV ED+P++ +A +  +   +   GR+S +
Sbjct: 361 VLITAAVPEDVPDELEAAKFGVEASDTGDGRISRI 395


>tr|C3JLE2|C3JLE2_RHOER Tax_Id=596309 RecName: Full=DNA replication
           and repair protein recF;[Rhodococcus erythropolis SK121]
          Length = 409

 Score =  415 bits (1066), Expect = e-114
 Identities = 214/395 (54%), Positives = 275/395 (69%), Gaps = 13/395 (3%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF R   L DFRSW  + LDL PG TVF+G NG GKTN++E+L Y +TL SHRV+ DAP+
Sbjct: 1   MFVRRFSLRDFRSWDSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSADAPM 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR+G+  A     VVN GREL +D+E+  G++N+AR+N+SP R  RE+LG+L++V+F+PE
Sbjct: 61  IRSGSASAFAGATVVNNGRELTIDVELIEGKSNRARINQSPTRRPREVLGILQSVMFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDR--- 177
           DLSLVRGDPGDRRRYLDEL T+R P +A VRADYDKV+RQR+ALLKTA  A  RG R   
Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDKVLRQRSALLKTAGAALRRGSRGGE 180

Query: 178 --SVIDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVE 235
             +V+ TLEVWD          +A R++LV +L P + ++Y+ +AP SRPA+IRY+SS+ 
Sbjct: 181 SDNVLSTLEVWDGHLAAHGAQLLAGRLELVHDLAPHLAESYRSIAPESRPASIRYKSSLG 240

Query: 236 AIED--------APGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQP 287
           +  D          G + V +                   GVCLVGPHRDDLEL LGD P
Sbjct: 241 SSLDPEFTDPARISGIDDVAYLEERFHHELAQMRSKEIDRGVCLVGPHRDDLELILGDSP 300

Query: 288 AKGFASHGESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQ 347
           AKGFASHGESWS AL+LRL  + LL +DG +PVL+LDDVFAELD  RRRALATVA +AEQ
Sbjct: 301 AKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRRRRRALATVAATAEQ 360

Query: 348 VLVTAAVGEDIPEDWDARRVEIRMVEDDGGRVSMV 382
           VL+TAAV ED+P++ +A +  +   +   GR+S +
Sbjct: 361 VLITAAVPEDVPDELEAAKFGVEASDTGDGRISRI 395


>sp|Q5Z3Z6|RECF_NOCFA Tax_Id=37329 (recF)RecName: Full=DNA
           replication and repair protein recF;[Nocardia farcinica]
          Length = 388

 Score =  409 bits (1052), Expect = e-112
 Identities = 221/389 (56%), Positives = 270/389 (69%), Gaps = 7/389 (1%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           MF R L L DFRSW  V+L+L  GRTVF+G NG GKTNL+EA+ Y ATLGSHRV+ DAPL
Sbjct: 1   MFVRALSLRDFRSWEHVELELSTGRTVFLGANGNGKTNLLEAVGYLATLGSHRVSADAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR+GA+RA V   VVN GREL +D+E+  G AN+A++NRSPVR  REILG+L+ VLF+PE
Sbjct: 61  IRSGAQRARVGANVVNAGRELRIDVELNQGSANRAQINRSPVRRTREILGILQTVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LVRGDPG+RRR+LDEL T R P LAGVRADYD+V+RQR+ALLKTA   R+    + +
Sbjct: 121 DLALVRGDPGERRRFLDELCTARLPRLAGVRADYDRVLRQRSALLKTA--GRHARSTADL 178

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSV---EAI 237
            TL+VWD          VA R++LV +L P + +AY+ LAP SRPAAI YRS+    E +
Sbjct: 179 STLDVWDGHLAGHAAVLVAQRLRLVHDLFPYLAEAYRSLAPESRPAAIGYRSAYLPGEFL 238

Query: 238 EDAPGP--ESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
           + A  P  +                       GVCLVGPHRD+LEL LGD PAKGFASHG
Sbjct: 239 DPARAPRDDDAAALEEIILRELAAARRKELERGVCLVGPHRDELELMLGDTPAKGFASHG 298

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           ESWS ALALRL +++LL S   EPVLLLDDVFAELD  RR ALA VA  AEQVL+TAAV 
Sbjct: 299 ESWSFALALRLASFDLLRSTSAEPVLLLDDVFAELDRRRRTALAAVAADAEQVLITAAVP 358

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMVAS 384
           ED+P +  A  + +    + G R S + +
Sbjct: 359 EDVPAELSATPIRVATAGEAGHRTSHIVT 387


>sp|A4F5N5|RECF_SACEN Tax_Id=405948 (recF)RecName: Full=DNA
           replication and repair protein recF;[Saccharopolyspora
           erythraea]
          Length = 391

 Score =  397 bits (1020), Expect = e-108
 Identities = 215/391 (54%), Positives = 260/391 (66%), Gaps = 18/391 (4%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHL +TDFRSW   DL  EPG TV VG NG GKTNLVEAL Y ATLGSHRVATDAPL
Sbjct: 1   MYVRHLQVTDFRSWPHADLTFEPGPTVLVGSNGQGKTNLVEALGYVATLGSHRVATDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           +R G +RA+V   VVN GREL V+LEIT G+AN+AR+NR      R++LG+LR VLF+PE
Sbjct: 61  VRYGTQRAVVRAAVVNHGRELLVELEITPGKANRARINRGAAGKPRDVLGILRTVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           D+++VRGDPG+RRR+LD+L   R P  AGVR+DYD+V+RQR+ALLK+A  A+  G    +
Sbjct: 121 DMAMVRGDPGERRRFLDDLLVARAPRYAGVRSDYDRVLRQRSALLKSAGAAKRGGSGGDL 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAY-------QLLAPASRPAAIRYRSS 233
            TLEVWD          +A R+ LV  + P V  AY       +  AP+ R A +RYRSS
Sbjct: 181 RTLEVWDGHLARYGAELLAGRLDLVAAIAPHVTSAYANVAATAEETAPSGRVADVRYRSS 240

Query: 234 V-EAIEDAPG-----PESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQP 287
           + E++ +  G     P  VE                    GV LVGPHRDDLEL LG+ P
Sbjct: 241 LGESLPEGYGVPRGEPADVEVLEKALLAELERVRAQELERGVSLVGPHRDDLELMLGELP 300

Query: 288 AKGFASHGESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQ 347
           AKG+ASHGESWS ALALRL +Y LL  DG EPVL+LDDVFAELD  RR  LA +   AEQ
Sbjct: 301 AKGYASHGESWSFALALRLASYHLLAEDGAEPVLILDDVFAELDRRRRSRLAELVAGAEQ 360

Query: 348 VLVTAAVGEDIPED-----WDARRVEIRMVE 373
           VLVTAAV ED+PE+     +D R  E+R VE
Sbjct: 361 VLVTAAVAEDVPEELTGVRFDVREGEVRRVE 391


>tr|D5UPA7|D5UPA7_TSUPA Tax_Id=521096 SubName: Full=DNA replication
           and repair protein RecF;[Tsukamurella paurometabola DSM
           20162]
          Length = 401

 Score =  390 bits (1003), Expect = e-106
 Identities = 214/389 (55%), Positives = 262/389 (67%), Gaps = 5/389 (1%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ R L L DFRSW  VD++L PG TVFVG NGFGKTNL+EAL Y ATLGSHRV+TD PL
Sbjct: 1   MYVRRLRLHDFRSWDDVDIELGPGVTVFVGRNGFGKTNLIEALNYLATLGSHRVSTDQPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR G E A V   V N GREL  +++I +GRANKAR+N +P R  R++LG+L++VLF+PE
Sbjct: 61  IRVGTESATVLATVHNAGRELTAEVDIVAGRANKARINTAPSRRPRDLLGILQSVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGD---R 177
           DLSLVRGDPG RRR+LDELA  R P +A  +ADYD+V++QRTALLKTA  A  RG     
Sbjct: 121 DLSLVRGDPGGRRRFLDELAILRTPRIAAEKADYDRVLKQRTALLKTAYAAARRGGPDAE 180

Query: 178 SVIDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSV--E 235
           S++ TL+VWD          +A+R+++V  LQP +  AY  LAP SR A + Y S +  +
Sbjct: 181 SMLATLDVWDVQLARFGAEMLAARLEVVAALQPHLTVAYGALAPHSRAATMEYTSGLFDD 240

Query: 236 AIEDAPGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHG 295
                P   +V                     GVCLVGPHRDDL+LRLG++PAKGFASHG
Sbjct: 241 EFGGDPATATVAELEEAMLAGLQRARSREIDRGVCLVGPHRDDLDLRLGNEPAKGFASHG 300

Query: 296 ESWSMALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVG 355
           ESWS ALALRL + ELL + G +PVLLLDDVFAELDT RR ALA VA   EQV+VTAAV 
Sbjct: 301 ESWSYALALRLASLELLRAGGSDPVLLLDDVFAELDTKRRTALADVAAETEQVIVTAAVP 360

Query: 356 EDIPEDWDARRVEIRMVEDDGGRVSMVAS 384
           ED+P    AR  E+ +      R+S + S
Sbjct: 361 EDLPPTLRARTFEVTVEGPADARISRLRS 389


>tr|C7MRN6|C7MRN6_SACVD Tax_Id=471857 RecName: Full=DNA replication
           and repair protein recF;[Saccharomonospora viridis]
          Length = 390

 Score =  384 bits (986), Expect = e-104
 Identities = 214/382 (56%), Positives = 256/382 (67%), Gaps = 13/382 (3%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M+ RHL +TDFRSW  VDL L  G TV VGPNG GKTNL+EA+ Y +TL SHRVATDAPL
Sbjct: 1   MYLRHLQVTDFRSWEHVDLPLAQGPTVLVGPNGQGKTNLLEAIGYISTLSSHRVATDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           +R G +RA+V   VVNEGREL V+LEI  GRAN+AR+NR  V   R++LG+LR VLFSPE
Sbjct: 61  VRHGCDRALVRAAVVNEGRELTVELEIAPGRANRARINRGAVGKPRDVLGILRTVLFSPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAA------GARYR 174
           DL+LVRGDP +RRR+LD+L   R P  AGVR++YD+V+RQR ALLK+        GAR  
Sbjct: 121 DLALVRGDPSERRRFLDDLLVQRAPRYAGVRSEYDRVLRQRNALLKSVGRAGGRRGAREE 180

Query: 175 GDRSVIDTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSV 234
            D   + TL+VWD          +A+R+ LV EL P V  +Y  +AP SRPA I YRSS+
Sbjct: 181 TDPYALSTLQVWDNHLASAGAELLAARLNLVAELGPYVASSYADVAPDSRPARIAYRSSL 240

Query: 235 -----EAIEDAPGPE-SVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPA 288
                E      GPE S E                    GV L+GPHRDDLEL LG+ PA
Sbjct: 241 GGALPEGWGTPDGPEASTEQLGEILLRVLGEVRETELERGVSLIGPHRDDLELMLGEAPA 300

Query: 289 KGFASHGESWSMALALRLGAYELLCSD-GVEPVLLLDDVFAELDTSRRRALATVAGSAEQ 347
           KG+ASHGESWS ALALRL +Y LL ++ G EPVLLLDDVFAELD+ RR  LA VA  AEQ
Sbjct: 301 KGYASHGESWSFALALRLASYRLLRNESGGEPVLLLDDVFAELDSRRRARLAEVATKAEQ 360

Query: 348 VLVTAAVGEDIPEDWDARRVEI 369
           VLVTAAV ED+P ++   R  +
Sbjct: 361 VLVTAAVDEDVPVEFAGVRYAV 382


>tr|D1ADA3|D1ADA3_THECD Tax_Id=471852 RecName: Full=DNA replication
           and repair protein recF;[Thermomonospora curvata]
          Length = 379

 Score =  379 bits (972), Expect = e-103
 Identities = 205/362 (56%), Positives = 251/362 (69%), Gaps = 1/362 (0%)

Query: 1   MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60
           M   HL L DFRS+A  ++ LEPG +VFVGPNG GKTNL+EA+ Y A   SHRVATDAPL
Sbjct: 1   MHVAHLSLQDFRSYATAEIALEPGVSVFVGPNGQGKTNLMEAIGYVAAHSSHRVATDAPL 60

Query: 61  IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120
           IR GA RAIV   VV + R+  ++LEI  GR+N+ARLNR+PV   REILG+LR VLF+PE
Sbjct: 61  IRQGAPRAIVRAGVVRDDRKALIELEINPGRSNRARLNRAPVPRPREILGMLRTVLFAPE 120

Query: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180
           DL+LV+GDPG+RRR+LDEL T R P LAGVRADYD+V+RQR ALLK+AA  R      ++
Sbjct: 121 DLALVKGDPGERRRFLDELLTARAPRLAGVRADYDRVLRQRNALLKSAAAHRRPPGPEML 180

Query: 181 DTLEVWDXXXXXXXXXXVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSV-EAIED 239
            TLEVWD          +A+R+KLV +L P   KAY  LAP    A++ YRSS+ E + +
Sbjct: 181 ATLEVWDSHLARVGAELLAARLKLVADLSPLAAKAYAALAPGGGIASLAYRSSLGERLPE 240

Query: 240 APGPESVEFYXXXXXXXXXXXXXXXXXXGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299
              P   +                    GV LVGPHRD+L L+LG  PA+GFASHGESWS
Sbjct: 241 DRMPVPRQTLAPLIEEALREVRRQELERGVSLVGPHRDELVLQLGGMPARGFASHGESWS 300

Query: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359
           +ALALRL A+ELL +DG +PVL+LDDVFAELDT RRR LA +   AEQVL+TAAV  D+P
Sbjct: 301 LALALRLAAFELLRADGDDPVLILDDVFAELDTGRRRRLAELVAPAEQVLITAAVPADVP 360

Query: 360 ED 361
            +
Sbjct: 361 AE 362


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.319    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 2,830,249,059
Number of extensions: 107371474
Number of successful extensions: 387466
Number of sequences better than 10.0: 3471
Number of HSP's gapped: 392164
Number of HSP's successfully gapped: 4225
Length of query: 384
Length of database: 4,236,830,644
Length adjustment: 140
Effective length of query: 244
Effective length of database: 2,485,729,684
Effective search space: 606518042896
Effective search space used: 606518042896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)