BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_0092
         (211 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QNM0|A0QNM0_MYCS2 Tax_Id=246196 SubName: Full=Probable tran...   330   9e-89
tr|Q1BFX5|Q1BFX5_MYCSS Tax_Id=164756 SubName: Full=Transcription...   273   1e-71
tr|A3PSL3|A3PSL3_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   273   1e-71
tr|A1U907|A1U907_MYCSK Tax_Id=189918 SubName: Full=Transcription...   273   1e-71
tr|A4T517|A4T517_MYCGI Tax_Id=350054 SubName: Full=Transcription...   244   4e-63
tr|A1T1A4|A1T1A4_MYCVP Tax_Id=350058 SubName: Full=Transcription...   234   6e-60
tr|Q7U2R4|Q7U2R4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC...   210   1e-52
tr|P96821|P96821_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSC...   210   1e-52
tr|C6DR09|C6DR09_MYCTK Tax_Id=478434 SubName: Full=Transcription...   210   1e-52
tr|C1AJG9|C1AJG9_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   210   1e-52
tr|A5WIJ9|A5WIJ9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   210   1e-52
tr|A5TYL9|A5TYL9_MYCTA Tax_Id=419947 SubName: Full=TetR-family t...   210   1e-52
tr|A1KEW4|A1KEW4_MYCBP Tax_Id=410289 SubName: Full=Probable tran...   210   1e-52
tr|D6G8H7|D6G8H7_MYCTU Tax_Id=478435 SubName: Full=Transcription...   210   1e-52
tr|D6FW43|D6FW43_MYCTU Tax_Id=611304 SubName: Full=Transcription...   210   1e-52
tr|D6F084|D6F084_MYCTU Tax_Id=611302 SubName: Full=Transcription...   210   1e-52
tr|D5ZBJ1|D5ZBJ1_MYCTU Tax_Id=537210 SubName: Full=Transcription...   210   1e-52
tr|D5Z9U8|D5Z9U8_MYCTU Tax_Id=537209 SubName: Full=TetR-family t...   210   1e-52
tr|D5YYZ5|D5YYZ5_MYCTU Tax_Id=515616 SubName: Full=TetR family t...   210   1e-52
tr|D5YAY6|D5YAY6_MYCTU Tax_Id=520141 SubName: Full=TetR family t...   210   1e-52
tr|D5XMV7|D5XMV7_MYCTU Tax_Id=515617 SubName: Full=Transcription...   210   1e-52
tr|A4KNG8|A4KNG8_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   210   1e-52
tr|A2VN72|A2VN72_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   210   1e-52
tr|B2HLS3|B2HLS3_MYCMM Tax_Id=216594 SubName: Full=Transcription...   187   9e-46
tr|A0PWG6|A0PWG6_MYCUA Tax_Id=362242 SubName: Full=Transcription...   187   9e-46
tr|A0QMY0|A0QMY0_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   178   3e-43
tr|Q73U06|Q73U06_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   177   9e-43
tr|D5PAI6|D5PAI6_9MYCO Tax_Id=525368 SubName: Full=TetR family t...   151   6e-35
tr|D6FCX6|D6FCX6_MYCTU Tax_Id=611303 SubName: Full=Transcription...   135   3e-30
tr|D5YMH8|D5YMH8_MYCTU Tax_Id=520140 SubName: Full=TetR family t...   107   7e-22
tr|Q1B7D9|Q1B7D9_MYCSS Tax_Id=164756 SubName: Full=Transcription...   103   2e-20
tr|A3Q160|A3Q160_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   103   2e-20
tr|A1UHN4|A1UHN4_MYCSK Tax_Id=189918 SubName: Full=Transcription...   103   2e-20
tr|D3M2P0|D3M2P0_9ACTO Tax_Id=656024 SubName: Full=Transcription...    92   5e-17
tr|A1T8T3|A1T8T3_MYCVP Tax_Id=350058 SubName: Full=Transcription...    91   9e-17
tr|A0QX54|A0QX54_MYCS2 Tax_Id=246196 SubName: Full=Probable tran...    85   5e-15
tr|D5P5S0|D5P5S0_9MYCO Tax_Id=525368 SubName: Full=TetR family t...    79   3e-13
tr|A4T9K2|A4T9K2_MYCGI Tax_Id=350054 SubName: Full=Transcription...    73   2e-11
tr|Q0RLC6|Q0RLC6_FRAAA Tax_Id=326424 SubName: Full=Putative unch...    67   1e-09
sp|P0ACT9|UIDR_SHIFL Tax_Id=623 (uidR)RecName: Full=HTH-type tra...    59   3e-07
sp|P0ACT6|UIDR_ECOLI Tax_Id=83333 (uidR)RecName: Full=HTH-type t...    59   3e-07
sp|P0ACT7|UIDR_ECOL6 Tax_Id=217992 (uidR)RecName: Full=HTH-type ...    59   3e-07
sp|P0ACT8|UIDR_ECO57 Tax_Id=83334 (uidR)RecName: Full=HTH-type t...    59   3e-07
tr|Q3Z1X1|Q3Z1X1_SHISS Tax_Id=300269 (uidR)SubName: Full=Repress...    59   3e-07
tr|B3I8P3|B3I8P3_ECOLX Tax_Id=340185 (uidR)SubName: Full=Transcr...    59   3e-07

>tr|A0QNM0|A0QNM0_MYCS2 Tax_Id=246196 SubName: Full=Probable
           transcriptional regulatory protein;[Mycobacterium
           smegmatis]
          Length = 211

 Score =  330 bits (845), Expect = 9e-89
 Identities = 177/211 (83%), Positives = 177/211 (83%)

Query: 1   MAHIXXXXXXXXXXXXXXETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYF 60
           MAHI              ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYF
Sbjct: 1   MAHIASRGPGRPPAAKAAETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYF 60

Query: 61  GSKRVLYREVVEQTNATVIAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTS 120
           GSKRVLYREVVEQTNATVIAAGVARAREATSLLGRL                    LVTS
Sbjct: 61  GSKRVLYREVVEQTNATVIAAGVARAREATSLLGRLSAFFAAAMDAESADRSSAAFLVTS 120

Query: 121 VLESQRHPDLVSEEQDALLNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGF 180
           VLESQRHPDLVSEEQDALLNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGF
Sbjct: 121 VLESQRHPDLVSEEQDALLNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGF 180

Query: 181 YAGYVGRSEELAAIVDKFEMLMANKLWQLRD 211
           YAGYVGRSEELAAIVDKFEMLMANKLWQLRD
Sbjct: 181 YAGYVGRSEELAAIVDKFEMLMANKLWQLRD 211


>tr|Q1BFX5|Q1BFX5_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 211

 Score =  273 bits (697), Expect = 1e-71
 Identities = 144/191 (75%), Positives = 154/191 (80%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETRERIL AAREVFSELGYDAATFQAIAIRADLTRPAINHYF SKRVLYREVVEQTNA V
Sbjct: 19  ETRERILRAAREVFSELGYDAATFQAIAIRADLTRPAINHYFASKRVLYREVVEQTNAWV 78

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I+AG+ RA    +LLGRL                    LVTSVLESQRHPDL S+E DAL
Sbjct: 79  ISAGMERAHGEGTLLGRLSAFFSAAMHAESEDRSAAAFLVTSVLESQRHPDLRSDEHDAL 138

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             SR FV+WAVNDAIERGEL+TDTDIP+IVEMLVAVMWGMGFYAGYVG  +EL  IV+KF
Sbjct: 139 RMSRSFVSWAVNDAIERGELSTDTDIPSIVEMLVAVMWGMGFYAGYVGGQQELEVIVEKF 198

Query: 199 EMLMANKLWQL 209
           E+LMANKLWQL
Sbjct: 199 ELLMANKLWQL 209


>tr|A3PSL3|A3PSL3_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 211

 Score =  273 bits (697), Expect = 1e-71
 Identities = 144/191 (75%), Positives = 154/191 (80%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETRERIL AAREVFSELGYDAATFQAIAIRADLTRPAINHYF SKRVLYREVVEQTNA V
Sbjct: 19  ETRERILRAAREVFSELGYDAATFQAIAIRADLTRPAINHYFASKRVLYREVVEQTNAWV 78

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I+AG+ RA    +LLGRL                    LVTSVLESQRHPDL S+E DAL
Sbjct: 79  ISAGMERAHGEGTLLGRLSAFFSAAMHAESEDRSAAAFLVTSVLESQRHPDLRSDEHDAL 138

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             SR FV+WAVNDAIERGEL+TDTDIP+IVEMLVAVMWGMGFYAGYVG  +EL  IV+KF
Sbjct: 139 RMSRSFVSWAVNDAIERGELSTDTDIPSIVEMLVAVMWGMGFYAGYVGGQQELEVIVEKF 198

Query: 199 EMLMANKLWQL 209
           E+LMANKLWQL
Sbjct: 199 ELLMANKLWQL 209


>tr|A1U907|A1U907_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 211

 Score =  273 bits (697), Expect = 1e-71
 Identities = 144/191 (75%), Positives = 154/191 (80%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETRERIL AAREVFSELGYDAATFQAIAIRADLTRPAINHYF SKRVLYREVVEQTNA V
Sbjct: 19  ETRERILRAAREVFSELGYDAATFQAIAIRADLTRPAINHYFASKRVLYREVVEQTNAWV 78

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I+AG+ RA    +LLGRL                    LVTSVLESQRHPDL S+E DAL
Sbjct: 79  ISAGMERAHGEGTLLGRLSAFFSAAMHAESEDRSAAAFLVTSVLESQRHPDLRSDEHDAL 138

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             SR FV+WAVNDAIERGEL+TDTDIP+IVEMLVAVMWGMGFYAGYVG  +EL  IV+KF
Sbjct: 139 RMSRSFVSWAVNDAIERGELSTDTDIPSIVEMLVAVMWGMGFYAGYVGGQQELEVIVEKF 198

Query: 199 EMLMANKLWQL 209
           E+LMANKLWQL
Sbjct: 199 ELLMANKLWQL 209


>tr|A4T517|A4T517_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium gilvum]
          Length = 217

 Score =  244 bits (624), Expect = 4e-63
 Identities = 125/193 (64%), Positives = 150/193 (77%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETRERIL AAREVFSELGYDAATFQAIAIRADLTRPAINHYF SK VL+ EVVEQTNAT+
Sbjct: 25  ETRERILRAAREVFSELGYDAATFQAIAIRADLTRPAINHYFASKGVLWAEVVEQTNATI 84

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           ++  +ARA E TSL+ RL                    LVTSVLESQRHP+L+++E D+L
Sbjct: 85  VSEAIARAHEHTSLIERLSAFLTVATQAESDDRSAAAFLVTSVLESQRHPELINDEHDSL 144

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
            NSR+FV+ AV+DAIERGEL+ DTD+  +VEMLVAV+WGMGFYAG+VG   +L+A+V K 
Sbjct: 145 KNSRRFVSAAVSDAIERGELSADTDVTHLVEMLVAVVWGMGFYAGFVGDRSDLSAVVHKL 204

Query: 199 EMLMANKLWQLRD 211
           E+L+A KLW + D
Sbjct: 205 ELLLAGKLWNVAD 217


>tr|A1T1A4|A1T1A4_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 187

 Score =  234 bits (596), Expect = 6e-60
 Identities = 116/185 (62%), Positives = 139/185 (75%)

Query: 25  LSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVIAAGVA 84
           + AARE+FSELGYDAATFQAIA+RADLTRPAINHYF SKRVL+ EVVEQT A+V+  G+A
Sbjct: 1   MRAAREIFSELGYDAATFQAIAVRADLTRPAINHYFSSKRVLWAEVVEQTYASVVGVGIA 60

Query: 85  RAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALLNSRKF 144
           RA E TSLL RL                    LVTSVLESQRHP+L  ++ D+L NSR F
Sbjct: 61  RAHEQTSLLNRLMAFLSVATQVDTDDRSAAAFLVTSVLESQRHPELADDDHDSLTNSRAF 120

Query: 145 VAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKFEMLMAN 204
           V+WAVNDA+ RGEL+ DTD+  +VEMLVAV+WGMGFYAG+VG   +  A++ K E+L+AN
Sbjct: 121 VSWAVNDAVARGELSADTDVNHLVEMLVAVVWGMGFYAGFVGDRSDFGAVMHKLELLLAN 180

Query: 205 KLWQL 209
           KLW L
Sbjct: 181 KLWNL 185


>tr|Q7U2R4|Q7U2R4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY
           TETR-FAMILY);[Mycobacterium bovis]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|P96821|P96821_MYCTU Tax_Id=1773 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY
           TETR-FAMILY); SubName: Full=Transcriptional regulator,
           TetR family;[Mycobacterium tuberculosis]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|C6DR09|C6DR09_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator, tetR-family;[Mycobacterium tuberculosis]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|C1AJG9|C1AJG9_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|A5WIJ9|A5WIJ9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein,
           tetR-family;[Mycobacterium tuberculosis]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|A5TYL9|A5TYL9_MYCTA Tax_Id=419947 SubName: Full=TetR-family
           transcriptional regulator;[Mycobacterium tuberculosis]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|A1KEW4|A1KEW4_MYCBP Tax_Id=410289 SubName: Full=Probable
           transcriptional regulatory protein (Possibly
           tetR-family);[Mycobacterium bovis]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|D6G8H7|D6G8H7_MYCTU Tax_Id=478435 SubName: Full=Transcriptional
           regulator, tetR-family;[Mycobacterium tuberculosis KZN
           605]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|D6FW43|D6FW43_MYCTU Tax_Id=611304 SubName: Full=Transcriptional
           regulator, tetR-family;[Mycobacterium tuberculosis K85]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|D6F084|D6F084_MYCTU Tax_Id=611302 SubName: Full=Transcriptional
           regulator, tetR-family; Flags: Fragment;[Mycobacterium
           tuberculosis T46]
          Length = 279

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 87  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 146

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 147 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 206

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 207 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 266

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 267 QQLLAGTLWR 276


>tr|D5ZBJ1|D5ZBJ1_MYCTU Tax_Id=537210 SubName: Full=Transcriptional
           regulator, tetR-family;[Mycobacterium tuberculosis T17]
          Length = 219

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 27  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 86

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 87  IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 146

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 147 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 206

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 207 QQLLAGTLWR 216


>tr|D5Z9U8|D5Z9U8_MYCTU Tax_Id=537209 SubName: Full=TetR-family
           transcriptional regulator;[Mycobacterium tuberculosis GM
           1503]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|D5YYZ5|D5YYZ5_MYCTU Tax_Id=515616 SubName: Full=TetR family
           transcriptional regulator;[Mycobacterium tuberculosis
           02_1987]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|D5YAY6|D5YAY6_MYCTU Tax_Id=520141 SubName: Full=TetR family
           transcriptional regulator;[Mycobacterium tuberculosis
           T85]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|D5XMV7|D5XMV7_MYCTU Tax_Id=515617 SubName: Full=Transcriptional
           regulator, tetR-family; Flags: Fragment;[Mycobacterium
           tuberculosis T92]
          Length = 279

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 87  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 146

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 147 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 206

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 207 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 266

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 267 QQLLAGTLWR 276


>tr|A4KNG8|A4KNG8_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein (Possibly
           tetR-family);[Mycobacterium tuberculosis str. Haarlem]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|A2VN72|A2VN72_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 280

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/190 (55%), Positives = 132/190 (69%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I AG+ RAR   +L+GRL                    L T+VLESQRHP+L   E DA+
Sbjct: 148 IVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAV 207

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+VG  + +A I D F
Sbjct: 208 RATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSF 267

Query: 199 EMLMANKLWQ 208
           + L+A  LW+
Sbjct: 268 QQLLAGTLWR 277


>tr|B2HLS3|B2HLS3_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Possibly TetR-family);[Mycobacterium
           marinum]
          Length = 211

 Score =  187 bits (474), Expect = 9e-46
 Identities = 99/192 (51%), Positives = 125/192 (65%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           +TR RI+ AAREVFSE GYD ATFQAIA+ ADLTRPAINHYF SK+ LYREVV QTN  V
Sbjct: 19  DTRRRIVGAAREVFSERGYDGATFQAIAVSADLTRPAINHYFASKQALYREVVVQTNELV 78

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           +AAGV RAR   +LLG+L                    L T+VLESQRHP+L   + DA+
Sbjct: 79  VAAGVERARSVQTLLGQLCTFVMVAKEADASHPATTAFLATAVLESQRHPELRRSDHDAV 138

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+  AV DAI+RGEL    D   + E L+ ++ G+GFYAG+VG   ++  I+D  
Sbjct: 139 AATREFLDTAVRDAIQRGELEAGVDASQLAEALLLLLCGVGFYAGFVGSYRDMENILDTL 198

Query: 199 EMLMANKLWQLR 210
             +MA  LW+ R
Sbjct: 199 CKMMAGTLWKPR 210


>tr|A0PWG6|A0PWG6_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein (Possibly TetR-family);[Mycobacterium
           ulcerans]
          Length = 212

 Score =  187 bits (474), Expect = 9e-46
 Identities = 99/192 (51%), Positives = 125/192 (65%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           +TR RI+ AAREVFSE GYD ATFQAIA+ ADLTRPAINHYF SK+ LYREVV QTN  V
Sbjct: 20  DTRRRIVGAAREVFSERGYDGATFQAIAVSADLTRPAINHYFASKQALYREVVVQTNELV 79

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           +AAGV RAR   +LLG+L                    L T+VLESQRHP+L   + DA+
Sbjct: 80  VAAGVERARSVQTLLGQLCTFVMVAKEADASHPATTAFLATAVLESQRHPELRRSDHDAV 139

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+  AV DAI+RGEL    D   + E L+ ++ G+GFYAG+VG   ++  I+D  
Sbjct: 140 AATREFLDTAVRDAIQRGELEAGVDASQLAEALLLLLCGVGFYAGFVGSYRDMENILDTL 199

Query: 199 EMLMANKLWQLR 210
             +MA  LW+ R
Sbjct: 200 CKMMAGTLWKPR 211


>tr|A0QMY0|A0QMY0_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium avium]
          Length = 211

 Score =  178 bits (452), Expect = 3e-43
 Identities = 93/190 (48%), Positives = 120/190 (63%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RI+ AAR VFSE GYD ATFQAIA RADLTRPAINHYF SKR LY+EV+++TN  V
Sbjct: 19  ETRQRIIQAARLVFSERGYDGATFQAIAARADLTRPAINHYFSSKRALYQEVMDETNEFV 78

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I  G+  A   T+L+GRL                    ++  VLESQRHP+  + E D++
Sbjct: 79  IGVGIKEADRETTLVGRLTAFISAAVKANAENPAGSAFIIGGVLESQRHPEWNTAENDSV 138

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+   VNDAIE GE+  D D  A+VE L+ VM G+G YAGYV   +E+ A+    
Sbjct: 139 RIAREFLIRVVNDAIEHGEVAADIDASALVETLLVVMCGVGLYAGYVETYQEMLAVTGML 198

Query: 199 EMLMANKLWQ 208
             L+   LW+
Sbjct: 199 RQLLEGALWR 208


>tr|Q73U06|Q73U06_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 213

 Score =  177 bits (448), Expect = 9e-43
 Identities = 93/190 (48%), Positives = 119/190 (62%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RI+ AAR VFSE GYD ATFQAIA RADLTRPAINHYF SKR LY+EV+++TN  V
Sbjct: 21  ETRQRIIQAARLVFSERGYDGATFQAIAARADLTRPAINHYFASKRALYQEVMDETNEFV 80

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           I  G+  A   T+L+GRL                    +   VLESQRHP+  + E D++
Sbjct: 81  IGVGIKEADRETTLVGRLTAFISAAVKANAENPAGSAFIFGGVLESQRHPEWNTAENDSV 140

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
             +R+F+   VNDAIE GE+  D D  A+VE L+ VM G+G YAGYV   +E+ A+    
Sbjct: 141 RIAREFLIRVVNDAIEHGEVAADIDASALVETLLVVMCGVGLYAGYVETYQEMLAVTGML 200

Query: 199 EMLMANKLWQ 208
             L+   LW+
Sbjct: 201 RQLLEGALWR 210


>tr|D5PAI6|D5PAI6_9MYCO Tax_Id=525368 SubName: Full=TetR family
           transcriptional regulator;[Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 187

 Score =  151 bits (381), Expect = 6e-35
 Identities = 85/187 (45%), Positives = 110/187 (58%)

Query: 25  LSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVIAAGVA 84
           + AAR VFSE GYD ATFQAIA RADLTRPAINHYF SKRVLYREV+EQTN  VI  G+ 
Sbjct: 1   MRAARLVFSERGYDGATFQAIAARADLTRPAINHYFPSKRVLYREVLEQTNQAVIGTGIE 60

Query: 85  RAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALLNSRKF 144
            A    +L  +L                    ++T VLESQRHP+  + E +++   R+F
Sbjct: 61  EAEREPTLPAQLAAFISVAVRANSDNPAGSALIITGVLESQRHPEWNTTENESVRIVREF 120

Query: 145 VAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKFEMLMAN 204
           +   V  AI RGE+  D D  A+VE L+ +M G+G YAG+V   ++L +I      L+  
Sbjct: 121 LVRGVAAAIGRGEVAADIDAAALVEALLVLMCGVGLYAGFVQSPDDLLSITGIMRRLLEG 180

Query: 205 KLWQLRD 211
            L   +D
Sbjct: 181 ALRGAQD 187


>tr|D6FCX6|D6FCX6_MYCTU Tax_Id=611303 SubName: Full=Transcriptional
           regulator, tetR-family; Flags: Fragment;[Mycobacterium
           tuberculosis CPHL_A]
          Length = 175

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/144 (46%), Positives = 91/144 (63%)

Query: 65  VLYREVVEQTNATVIAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLES 124
           +LY+EVVEQT+  VI AG+ RAR   +L+GRL                    L T+VLES
Sbjct: 29  LLYQEVVEQTHELVIVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLES 88

Query: 125 QRHPDLVSEEQDALLNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGY 184
           QRHP+L   E DA+  +R+F+ WAVNDAIERGEL  D D+ ++ E L+ V+ G+GFY G+
Sbjct: 89  QRHPELSRTENDAVRATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGF 148

Query: 185 VGRSEELAAIVDKFEMLMANKLWQ 208
           VG  + +A I D F+ L+A  LW+
Sbjct: 149 VGSYQRMATITDSFQQLLAGTLWR 172


>tr|D5YMH8|D5YMH8_MYCTU Tax_Id=520140 SubName: Full=TetR family
           transcriptional regulator;[Mycobacterium tuberculosis
           EAS054]
          Length = 157

 Score =  107 bits (268), Expect = 7e-22
 Identities = 53/69 (76%), Positives = 60/69 (86%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR+RIL AAR+VFSE GYD ATFQ IA+RADLTRPAINHYF +KRVLY+EVVEQT+  V
Sbjct: 88  ETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELV 147

Query: 79  IAAGVARAR 87
           I AG+ RAR
Sbjct: 148 IVAGIERAR 156


>tr|Q1B7D9|Q1B7D9_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 235

 Score =  103 bits (256), Expect = 2e-20
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 4/188 (2%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR +I+ A R V  E GY   TFQAIA R  L+RP +++YF ++  +Y  +V +    V
Sbjct: 24  ETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPTLHYYFATREEVYEGIVTEMREIV 83

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           +   V  +     LL RL                    L+++ LE QR+P+L +  +  +
Sbjct: 84  VDC-VEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPFLISARLEPQRNPELQAISESPV 142

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
              R F+   V+DAI RGEL  DTD+  + +ML  +++GM FY+G+     EL  I  + 
Sbjct: 143 ---RAFLMRLVSDAIRRGELDDDTDVEGVSDMLHVILYGMAFYSGFTNGPAELGTIAKQL 199

Query: 199 EMLMANKL 206
             L A+ L
Sbjct: 200 IELFAHGL 207


>tr|A3Q160|A3Q160_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 235

 Score =  103 bits (256), Expect = 2e-20
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 4/188 (2%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR +I+ A R V  E GY   TFQAIA R  L+RP +++YF ++  +Y  +V +    V
Sbjct: 24  ETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPTLHYYFATREEVYEGIVTEMREIV 83

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           +   V  +     LL RL                    L+++ LE QR+P+L +  +  +
Sbjct: 84  VDC-VEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPFLISARLEPQRNPELQAISESPV 142

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
              R F+   V+DAI RGEL  DTD+  + +ML  +++GM FY+G+     EL  I  + 
Sbjct: 143 ---RAFLMRLVSDAIRRGELDDDTDVEGVSDMLHVILYGMAFYSGFTNGPAELGTIAKQL 199

Query: 199 EMLMANKL 206
             L A+ L
Sbjct: 200 IELFAHGL 207


>tr|A1UHN4|A1UHN4_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 235

 Score =  103 bits (256), Expect = 2e-20
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 4/188 (2%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR +I+ A R V  E GY   TFQAIA R  L+RP +++YF ++  +Y  +V +    V
Sbjct: 24  ETRRQIVRAGRVVLIERGYSGMTFQAIAERTGLSRPTLHYYFATREEVYEGIVTEMREIV 83

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           +   V  +     LL RL                    L+++ LE QR+P+L +  +  +
Sbjct: 84  VDC-VEHSLRHDRLLDRLAAFVAAVRRVDHRDPSVVPFLISARLEPQRNPELQAISESPV 142

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKF 198
              R F+   V+DAI RGEL  DTD+  + +ML  +++GM FY+G+     EL  I  + 
Sbjct: 143 ---RAFLMRLVSDAIRRGELDDDTDVEGVSDMLHVILYGMAFYSGFTNGPAELGTIAKQL 199

Query: 199 EMLMANKL 206
             L A+ L
Sbjct: 200 IELFAHGL 207


>tr|D3M2P0|D3M2P0_9ACTO Tax_Id=656024 SubName: Full=Transcriptional
           regulator, TetR family;[Frankia symbiont of Datisca
           glomerata]
          Length = 232

 Score = 91.7 bits (226), Expect = 5e-17
 Identities = 60/187 (32%), Positives = 92/187 (49%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL +AR +FS +GY  AT   IA  A +TR  I  YF SK  LY  V E    +VI
Sbjct: 32  TRGRILRSARALFSTVGYRDATPAEIAEDAGVTRSTIYRYFPSKSDLYAAVFESMYPSVI 91

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
                +    T+L+ ++                     +TS+++  R+P+L ++ ++ + 
Sbjct: 92  DRMRTQTSAHTALVDQVATVFRVCAALNHEDPTYARFAITSLVDGLRYPELTNQAREQIG 151

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDKFE 199
             R F   +V+ AI RGEL +D D   I +MLVA++ GMG ++  VG   E     +   
Sbjct: 152 EMRDFFLVSVDRAIARGELPSDVDSRVIGDMLVAILCGMGLFSAIVGTERETDDATEMLV 211

Query: 200 MLMANKL 206
             +A +L
Sbjct: 212 RFLAGEL 218


>tr|A1T8T3|A1T8T3_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 213

 Score = 90.9 bits (224), Expect = 9e-17
 Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 6/173 (3%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           +TR  IL AAR+V +E GY AATFQ IA+RA ++RP +++YF ++  LY  ++    A V
Sbjct: 17  QTRRTILCAARDVIAEHGYRAATFQQIALRAGVSRPTLHYYFATREQLYEVLLADVRAEV 76

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEE--QD 136
            A   A A  A SLL +L                    +VT+ ++   H  ++  E    
Sbjct: 77  -ARCAAEATLAGSLLRQLEVFIAEMHRLGGAEPALMGLVVTARVD---HRGVLRHEAATA 132

Query: 137 ALLNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSE 189
            +     F    V DA+ RGEL  DTD  A+ ++L A+ WG+ F+AG++  ++
Sbjct: 133 VVATVHAFFDAVVVDAVRRGELAFDTDAHAVADLLGALFWGLVFHAGFISGAD 185


>tr|A0QX54|A0QX54_MYCS2 Tax_Id=246196 SubName: Full=Probable
           transcriptional regulatory protein,
           putative;[Mycobacterium smegmatis]
          Length = 214

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 4/171 (2%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           +TR  IL    E+ +E G+ A TFQ +A R+ L+RP +N+YF ++  L+  +V + NA +
Sbjct: 24  QTRMHILRVGCELINERGFAALTFQGVAKRSGLSRPTLNYYFATRDELFHALVHEGNA-I 82

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDAL 138
           +   +A A++    L R+                    LV + LE+ R+P L +    A+
Sbjct: 83  VQECIAAAKQQEDPLERVCALLDAMADAWSADPCLCQFLVNARLEAGRNPALPNGIATAI 142

Query: 139 LNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSE 189
              R F+   V DAI  G L+  TD   + ++L A++WG+G   GY G S+
Sbjct: 143 ---RDFLDDVVGDAIAGGALSAHTDPAPVAQLLHAMVWGVGLCLGYGGTSD 190


>tr|D5P5S0|D5P5S0_9MYCO Tax_Id=525368 SubName: Full=TetR family
           transcriptional regulator;[Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 208

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 1/185 (0%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           ETR +IL +AREVFS +G+D A+ + IA  A  TR AI +Y+ SK  LYR  +   +  V
Sbjct: 20  ETRLKILHSAREVFSTIGFDRASLRQIAEEAGFTRNAIANYYPSKIELYRAALTSVHEVV 79

Query: 79  IAAGVARAR-EATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDA 137
           I+  +  A  +  S+  R+                     VTS  ++  HPDL  +    
Sbjct: 80  ISEILGPALCQTGSIDRRIVAVFDRAVATIRIDQTFVRFFVTSTADAIHHPDLRDQAMQP 139

Query: 138 LLNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYAGYVGRSEELAAIVDK 197
           L+   +  A A+  A   GE+    D  A  ++LV ++WG+   AG+          ++ 
Sbjct: 140 LVAVHEHFAAALAAAQRDGEVDAGIDTEATTQVLVDLLWGLAVDAGFYSDQHRTRRTLEA 199

Query: 198 FEMLM 202
            E ++
Sbjct: 200 LERIV 204


>tr|A4T9K2|A4T9K2_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium gilvum]
          Length = 228

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 5/168 (2%)

Query: 19  ETRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATV 78
           +TR  +L+AAR++ +E GY A TFQ IA RA ++RP +++YF ++  LY  ++      +
Sbjct: 24  QTRRTVLAAARDIIAERGYQATTFQQIAQRAGVSRPTLHYYFATREDLYDALLADVCERL 83

Query: 79  IAAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQ--- 135
                A A +  SL G+L                    +VT+ ++         E +   
Sbjct: 84  GRCAAAAAGQ-DSLRGQLAAFMAEMNRLAVAEPAMMKLVVTARIDHHGARIGTGEGRGAA 142

Query: 136 -DALLNSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGMGFYA 182
            D +     F    V  A  RGEL    D  A+ +ML AV WG+GF+A
Sbjct: 143 TDIVSTVHDFYDAVVLAAAARGELPAGHDPHAVADMLAAVFWGLGFHA 190


>tr|Q0RLC6|Q0RLC6_FRAAA Tax_Id=326424 SubName: Full=Putative
           uncharacterized protein;[Frankia alni]
          Length = 207

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/159 (29%), Positives = 69/159 (43%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL AA    +E+GY  AT ++IA +ADLT  AI  YF SK  L  + ++   A V+
Sbjct: 18  TRRRILLAAMTHVAEVGYSRATMKSIAEQADLTSAAIYRYFPSKADLVLQALDDVFADVV 77

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
               A A     L  RL                      + + ES   P+  +       
Sbjct: 78  GRLEAAAFSVEGLRARLVALLEEALACMADHPSMTRFEASLLFESTHSPEFAAAVGYRRH 137

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGM 178
                    V +A++ GEL   T + A+V++L +V WG+
Sbjct: 138 TEETLYRRLVVEAVDTGELPVGTSVEAMVDLLTSVSWGL 176


>sp|P0ACT9|UIDR_SHIFL Tax_Id=623 (uidR)RecName: Full=HTH-type
           transcriptional regulator uidR; AltName: Full=Uid operon
           repressor;[Shigella flexneri]
          Length = 196

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL+AARE+FSE G+ +A+ +AI     ++   + H+F SK  L + ++ Q     +
Sbjct: 12  TRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERAL 71

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
               AR RE    +  +                    +V  + E  R+P + +  ++  +
Sbjct: 72  ----ARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHM 127

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGM 178
              +FVA  + DA ++GE++ D +      +L+ + +G+
Sbjct: 128 TITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGV 166


>sp|P0ACT6|UIDR_ECOLI Tax_Id=83333 (uidR)RecName: Full=HTH-type
           transcriptional regulator uidR; AltName: Full=Uid operon
           repressor; AltName: Full=Gus operon
           repressor;[Escherichia coli]
          Length = 196

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL+AARE+FSE G+ +A+ +AI     ++   + H+F SK  L + ++ Q     +
Sbjct: 12  TRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERAL 71

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
               AR RE    +  +                    +V  + E  R+P + +  ++  +
Sbjct: 72  ----ARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHM 127

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGM 178
              +FVA  + DA ++GE++ D +      +L+ + +G+
Sbjct: 128 TITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGV 166


>sp|P0ACT7|UIDR_ECOL6 Tax_Id=217992 (uidR)RecName: Full=HTH-type
           transcriptional regulator uidR; AltName: Full=Uid operon
           repressor;[Escherichia coli O6]
          Length = 196

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL+AARE+FSE G+ +A+ +AI     ++   + H+F SK  L + ++ Q     +
Sbjct: 12  TRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERAL 71

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
               AR RE    +  +                    +V  + E  R+P + +  ++  +
Sbjct: 72  ----ARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHM 127

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGM 178
              +FVA  + DA ++GE++ D +      +L+ + +G+
Sbjct: 128 TITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGV 166


>sp|P0ACT8|UIDR_ECO57 Tax_Id=83334 (uidR)RecName: Full=HTH-type
           transcriptional regulator uidR; AltName: Full=Uid operon
           repressor;[Escherichia coli O157:H7]
          Length = 196

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL+AARE+FSE G+ +A+ +AI     ++   + H+F SK  L + ++ Q     +
Sbjct: 12  TRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERAL 71

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
               AR RE    +  +                    +V  + E  R+P + +  ++  +
Sbjct: 72  ----ARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHM 127

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGM 178
              +FVA  + DA ++GE++ D +      +L+ + +G+
Sbjct: 128 TITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGV 166


>tr|Q3Z1X1|Q3Z1X1_SHISS Tax_Id=300269 (uidR)SubName: Full=Repressor
           for uid operon;[Shigella sonnei]
          Length = 196

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL+AARE+FSE G+ +A+ +AI     ++   + H+F SK  L + ++ Q     +
Sbjct: 12  TRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERAL 71

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
               AR RE    +  +                    +V  + E  R+P + +  ++  +
Sbjct: 72  ----ARFREPIKGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHM 127

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGM 178
              +FVA  + DA ++GE++ D +      +L+ + +G+
Sbjct: 128 TITEFVAQRMRDAQQKGEISPDINTSMTSRLLLDLTYGV 166


>tr|B3I8P3|B3I8P3_ECOLX Tax_Id=340185 (uidR)SubName:
           Full=Transcriptional regulator UidR;[Escherichia coli
           E22]
          Length = 192

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 20  TRERILSAAREVFSELGYDAATFQAIAIRADLTRPAINHYFGSKRVLYREVVEQTNATVI 79
           TR RIL+AARE+FSE G+ +A+ +AI     ++   + H+F SK  L + ++ Q     +
Sbjct: 8   TRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERAL 67

Query: 80  AAGVARAREATSLLGRLXXXXXXXXXXXXXXXXXXXXLVTSVLESQRHPDLVSEEQDALL 139
               AR RE    +  +                    +V  + E  R+P + +  ++  +
Sbjct: 68  ----ARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHM 123

Query: 140 NSRKFVAWAVNDAIERGELTTDTDIPAIVEMLVAVMWGM 178
              +FVA  + DA ++GE++ D +      +L+ + +G+
Sbjct: 124 TITEFVAQRMRDAQQKGEISPDINTSMTSRLLLDLTYGV 162


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.321    0.133    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,232,145,480
Number of extensions: 39336078
Number of successful extensions: 122222
Number of sequences better than 10.0: 8233
Number of HSP's gapped: 122694
Number of HSP's successfully gapped: 8243
Length of query: 211
Length of database: 4,236,830,644
Length adjustment: 132
Effective length of query: 79
Effective length of database: 2,585,792,596
Effective search space: 204277615084
Effective search space used: 204277615084
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)