BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_0180 (169 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QNV8|A0QNV8_MYCS2 Tax_Id=246196 SubName: Full=Putative HTH-... 252 9e-66 tr|A3PV67|A3PV67_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 186 1e-45 sp|P67443|Y3439_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 124 5e-27 sp|P67442|Y3405_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 124 5e-27 tr|C6DLS8|C6DLS8_MYCTK Tax_Id=478434 SubName: Full=Transcription... 124 5e-27 tr|A5WSX6|A5WSX6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 124 5e-27 tr|A5U880|A5U880_MYCTA Tax_Id=419947 SubName: Full=Putative tran... 124 5e-27 tr|A1KP96|A1KP96_MYCBP Tax_Id=410289 SubName: Full=Possible tran... 124 5e-27 tr|D6G3X6|D6G3X6_MYCTU Tax_Id=478435 SubName: Full=Transcription... 124 5e-27 tr|D6FSA0|D6FSA0_MYCTU Tax_Id=611304 SubName: Full=Transcription... 124 5e-27 tr|D6FLX2|D6FLX2_MYCTU Tax_Id=611303 SubName: Full=Transcription... 124 5e-27 tr|D6FA06|D6FA06_MYCTU Tax_Id=611302 SubName: Full=Transcription... 124 5e-27 tr|D5ZM46|D5ZM46_MYCTU Tax_Id=537210 SubName: Full=Transcription... 124 5e-27 tr|D5Z8P5|D5Z8P5_MYCTU Tax_Id=537209 SubName: Full=Transcription... 124 5e-27 tr|D5YX18|D5YX18_MYCTU Tax_Id=515616 SubName: Full=Transcription... 124 5e-27 tr|D5YK30|D5YK30_MYCTU Tax_Id=520140 SubName: Full=Transcription... 124 5e-27 tr|D5Y908|D5Y908_MYCTU Tax_Id=520141 SubName: Full=Transcription... 124 5e-27 tr|D5XZ99|D5XZ99_MYCTU Tax_Id=515617 SubName: Full=Transcription... 124 5e-27 tr|A4KLT9|A4KLT9_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 124 5e-27 tr|A2VPJ3|A2VPJ3_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 124 5e-27 tr|A0QKP9|A0QKP9_MYCA1 Tax_Id=243243 SubName: Full=Putative HTH-... 121 2e-26 tr|D5PCM1|D5PCM1_9MYCO Tax_Id=525368 SubName: Full=TetR family t... 117 4e-25 tr|B2HD27|B2HD27_MYCMM Tax_Id=216594 SubName: Full=Transcription... 107 4e-22 tr|A0PMG5|A0PMG5_MYCUA Tax_Id=362242 SubName: Full=Transcription... 107 4e-22 tr|B1MEC1|B1MEC1_MYCA9 Tax_Id=561007 SubName: Full=Putative tran... 102 2e-20 tr|D4SHR0|D4SHR0_9ACTO Tax_Id=585531 SubName: Full=TetR family t... 62 2e-08 tr|B8FE74|B8FE74_DESAA Tax_Id=439235 SubName: Full=Transcription... 60 9e-08 tr|B8FB43|B8FB43_DESAA Tax_Id=439235 SubName: Full=Transcription... 60 1e-07 tr|A8L3P0|A8L3P0_FRASN Tax_Id=298653 SubName: Full=Transcription... 52 2e-05 tr|D3DB58|D3DB58_9ACTO Tax_Id=102897 SubName: Full=Transcription... 52 3e-05 tr|A4F9M2|A4F9M2_SACEN Tax_Id=405948 SubName: Full=Transcription... 51 4e-05 tr|A4FF92|A4FF92_SACEN Tax_Id=405948 SubName: Full=Transcription... 49 2e-04 tr|D3CHV6|D3CHV6_9ACTO Tax_Id=648999 SubName: Full=Transcription... 49 3e-04 tr|D1VET1|D1VET1_9ACTO Tax_Id=298654 SubName: Full=Transcription... 49 3e-04 tr|D1S2X4|D1S2X4_9ACTO Tax_Id=644283 SubName: Full=Transcription... 49 3e-04 tr|Q9RCV4|Q9RCV4_STRCO Tax_Id=1902 SubName: Full=Putative TetR-f... 48 5e-04 tr|D6EWX2|D6EWX2_STRLI Tax_Id=457428 SubName: Full=TetR family t... 48 5e-04 tr|D2BAT2|D2BAT2_STRRD Tax_Id=479432 SubName: Full=Putative tran... 47 6e-04 tr|A8L7D5|A8L7D5_FRASN Tax_Id=298653 SubName: Full=Transcription... 47 6e-04 tr|A6V4K7|A6V4K7_PSEA7 Tax_Id=381754 SubName: Full=Transcription... 47 8e-04 tr|A8M5R7|A8M5R7_SALAI Tax_Id=391037 SubName: Full=Transcription... 47 0.001 tr|D3D905|D3D905_9ACTO Tax_Id=102897 SubName: Full=Transcription... 47 0.001 tr|D2PX23|D2PX23_KRIFD Tax_Id=479435 SubName: Full=Transcription... 46 0.001 tr|B2HPE2|B2HPE2_MYCMM Tax_Id=216594 SubName: Full=Transcription... 46 0.001 tr|A0PNV2|A0PNV2_MYCUA Tax_Id=362242 SubName: Full=Transcription... 46 0.001 >tr|A0QNV8|A0QNV8_MYCS2 Tax_Id=246196 SubName: Full=Putative HTH-type transcriptional regulator;[Mycobacterium smegmatis] Length = 169 Score = 252 bits (644), Expect = 9e-66 Identities = 132/169 (78%), Positives = 132/169 (78%) Query: 1 MTTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXX 60 MTTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK Sbjct: 1 MTTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKEA 60 Query: 61 XXXXXXXXXXXXXXTARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEEL 120 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEEL Sbjct: 61 LVAAVLDFLADELVTARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEEL 120 Query: 121 VEXXXXXXXXXXXXXXXXXXXXXLQLGWRLFGPFLRAATGLDDNHPPAD 169 VE LQLGWRLFGPFLRAATGLDDNHPPAD Sbjct: 121 VEAARQRHQDDHAARAATADAIALQLGWRLFGPFLRAATGLDDNHPPAD 169 >tr|A3PV67|A3PV67_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 190 Score = 186 bits (471), Expect = 1e-45 Identities = 100/165 (60%), Positives = 107/165 (64%) Query: 1 MTTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXX 60 MTTA G DAGARIRP+VL+HAADLFAERGPAAT+LRD+A RS VNAGLIFRHIGNK Sbjct: 1 MTTAPGAPTDAGARIRPIVLSHAADLFAERGPAATTLRDIAARSKVNAGLIFRHIGNKEA 60 Query: 61 XXXXXXXXXXXXXXTARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEEL 120 AR + E +EA ERSWKVIARALLDGYDVG LQ FP VE+L Sbjct: 61 VVAAVLDQLADDLIAARDAGSSREEVEARAERSWKVIARALLDGYDVGRLQRGFPNVEQL 120 Query: 121 VEXXXXXXXXXXXXXXXXXXXXXLQLGWRLFGPFLRAATGLDDNH 165 V LQLGWRLFGPFLRAATGLDD H Sbjct: 121 VAVARERQGDEYAARVATADALALQLGWRLFGPFLRAATGLDDPH 165 >sp|P67443|Y3439_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized HTH-type transcriptional regulator Mb3439c;[Mycobacterium bovis] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >sp|P67442|Y3405_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv3405c/MT3513;[Mycobacterium tuberculosis] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|C6DLS8|C6DLS8_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|A5WSX6|A5WSX6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|A5U880|A5U880_MYCTA Tax_Id=419947 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|A1KP96|A1KP96_MYCBP Tax_Id=410289 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium bovis] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D6G3X6|D6G3X6_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis KZN 605] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D6FSA0|D6FSA0_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis K85] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D6FLX2|D6FLX2_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis CPHL_A] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D6FA06|D6FA06_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T46] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D5ZM46|D5ZM46_MYCTU Tax_Id=537210 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T17] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D5Z8P5|D5Z8P5_MYCTU Tax_Id=537209 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis GM 1503] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D5YX18|D5YX18_MYCTU Tax_Id=515616 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis 02_1987] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D5YK30|D5YK30_MYCTU Tax_Id=520140 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis EAS054] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D5Y908|D5Y908_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis T85] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|D5XZ99|D5XZ99_MYCTU Tax_Id=515617 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T92] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|A4KLT9|A4KLT9_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|A2VPJ3|A2VPJ3_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 188 Score = 124 bits (310), Expect = 5e-27 Identities = 66/149 (44%), Positives = 84/149 (56%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 ++AP ++IE ++R +V+ARALLDGY VG LQ RFP V EL++ Sbjct: 79 RLLHSEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR+ATG+D+ Sbjct: 139 RLAVAHALALQFGWRLFAPMLRSATGIDE 167 >tr|A0QKP9|A0QKP9_MYCA1 Tax_Id=243243 SubName: Full=Putative HTH-type transcriptional regulator;[Mycobacterium avium] Length = 173 Score = 121 bits (304), Expect = 2e-26 Identities = 63/145 (43%), Positives = 79/145 (54%) Query: 19 VLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXXTARG 78 +L A DLFAERGPAATS+RD+A R GVN GL+FRH G K Sbjct: 5 ILEAATDLFAERGPAATSIRDIAARCGVNHGLVFRHFGTKEQLVGAVLDHLGANLSALLA 64 Query: 79 TDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXXXXXX 138 TD P EV+E ++R +V+AR +LDGY G LQ RFP + L++ Sbjct: 65 TDTPAEVVEQSLDRQMRVMARTVLDGYPAGQLQKRFPNIATLLDGVRPLHDDELHARLAV 124 Query: 139 XXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LRAATG+++ Sbjct: 125 ANALALQFGWRLFAPILRAATGIEE 149 >tr|D5PCM1|D5PCM1_9MYCO Tax_Id=525368 SubName: Full=TetR family transcriptional regulator;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 177 Score = 117 bits (294), Expect = 4e-25 Identities = 61/151 (40%), Positives = 80/151 (52%) Query: 13 ARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXX 72 A + +L A DLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 6 AEVAAAILEAATDLFAERGPAATSIRDIAARSNVNHGLVFRHFGTKDKLVGAVLDHLGAD 65 Query: 73 XXTARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXX 132 ++ P +V++ ++R +V+AR +LDGY G LQ RFP + L++ Sbjct: 66 LSALISSEPPADVLDRALDRQMRVMARTVLDGYPAGQLQTRFPTIAALLDWVLPLHDNEI 125 Query: 133 XXXXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 LQ GWRLF P LR ATGLD+ Sbjct: 126 KARLAVANALALQFGWRLFAPILRTATGLDE 156 >tr|B2HD27|B2HD27_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulator;[Mycobacterium marinum] Length = 169 Score = 107 bits (268), Expect = 4e-22 Identities = 63/145 (43%), Positives = 76/145 (52%) Query: 19 VLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXXTARG 78 +L AADLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 1 MLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60 Query: 79 TDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXXXXXX 138 P + +E ++R +V AR LLDGY LQ RFP V EL+ Sbjct: 61 AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120 Query: 139 XXXXXLQLGWRLFGPFLRAATGLDD 163 L+LGWRLF P LR+ATGLD+ Sbjct: 121 ANAIALRLGWRLFEPMLRSATGLDE 145 >tr|A0PMG5|A0PMG5_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulator;[Mycobacterium ulcerans] Length = 191 Score = 107 bits (268), Expect = 4e-22 Identities = 64/149 (42%), Positives = 76/149 (51%) Query: 15 IRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXX 74 + VL AADLFAERGPAATS+RD+A RS VN GL+FRH G K Sbjct: 19 VAAAVLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLT 78 Query: 75 TARGTDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXX 134 P + +E ++R +V AR LLDGY LQ RFP V EL+ Sbjct: 79 ELLRAGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTA 138 Query: 135 XXXXXXXXXLQLGWRLFGPFLRAATGLDD 163 L LGWRLF P LR+ATGLD+ Sbjct: 139 RLAVANAIALCLGWRLFEPMLRSATGLDE 167 >tr|B1MEC1|B1MEC1_MYCA9 Tax_Id=561007 SubName: Full=Putative transcriptional regulator;[Mycobacterium abscessus] Length = 186 Score = 102 bits (253), Expect = 2e-20 Identities = 60/145 (41%), Positives = 76/145 (52%) Query: 19 VLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXXTARG 78 VLT A+ LFAE+GPAATS+R+VA R+GVN GL+ RH G+K R Sbjct: 21 VLTAASALFAEKGPAATSIREVATRAGVNHGLVHRHFGSKRQLLAATLQHLADTAAAVRE 80 Query: 79 TDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEXXXXXXXXXXXXXXXX 138 AP E +EA + +V+ R+ LDG+ + LQ R P + L+E Sbjct: 81 AGAPIEELEAAHDLQLRVMVRSTLDGFPIEELQERKPGMAWLLEQVRPGHADERDARLAA 140 Query: 139 XXXXXLQLGWRLFGPFLRAATGLDD 163 LQLGWRL GP LRA GLDD Sbjct: 141 AHAIALQLGWRLMGPSLRAGFGLDD 165 >tr|D4SHR0|D4SHR0_9ACTO Tax_Id=585531 SubName: Full=TetR family transcriptional regulator;[Aeromicrobium marinum DSM 15272] Length = 191 Score = 62.4 bits (150), Expect = 2e-08 Identities = 52/183 (28%), Positives = 73/183 (39%), Gaps = 23/183 (12%) Query: 1 MTTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXX 60 MT++S G+ ++R VLT A++L AERGP S+RD+AER+GVN L+ RH G K Sbjct: 1 MTSSSAGRPRGRDQVRSAVLTAASELVAERGPDRFSVRDIAERAGVNHALVHRHFGTKAD 60 Query: 61 XXXXXXXXXXXXXXTA--------RGTDAPEEVIE-----AHVERSWKVIARALLDGYDV 107 A G P V + A W+ + +A+LD + Sbjct: 61 VMEQMLAADARVVVDAILGSGLPTDGEATPSVVADLLDLLAARPSYWRTLVQAVLDSPEA 120 Query: 108 GALQHRFPVVEELVEXXXXXXXXXXXXXXXXXXXXXL-QLGWRLFGPFLRAATGLDDNHP 166 P + LGW +FGPF+ +TG D Sbjct: 121 A-----LPGTASTTALFSDLWAGGDADRATSTSVAGITALGWLIFGPFMAESTGAD---- 171 Query: 167 PAD 169 PAD Sbjct: 172 PAD 174 >tr|B8FE74|B8FE74_DESAA Tax_Id=439235 SubName: Full=Transcriptional regulator, TetR family;[Desulfatibacillum alkenivorans] Length = 194 Score = 60.1 bits (144), Expect = 9e-08 Identities = 51/176 (28%), Positives = 71/176 (40%), Gaps = 12/176 (6%) Query: 3 TASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXX 62 TA + A + +L + LFAE+G AA S RD+A ++ VN GLI RH K Sbjct: 2 TAKTNKPMGKAAVMEAILEASTALFAEKGIAAVSWRDIAAKANVNPGLIHRHFRTKENIR 61 Query: 63 XXXXXXXXXXXXTARGTDA-PEEVIEAHV------ERSWKVIARALLDGYDVGALQHRFP 115 G PEE + V + WKV+AR LDG G +Q FP Sbjct: 62 LQVQDRLMEEINKDIGEPGDPEEALVNGVLALRKNDAFWKVMARTFLDGKFEGDVQTSFP 121 Query: 116 VVEELVE-----XXXXXXXXXXXXXXXXXXXXXLQLGWRLFGPFLRAATGLDDNHP 166 ++++V+ + LG LF ++ ATGLD P Sbjct: 122 FLQKMVDSLNTAQDAGTITSRVDPTMLVAGGTAMALGLLLFEKYILPATGLDAAPP 177 >tr|B8FB43|B8FB43_DESAA Tax_Id=439235 SubName: Full=Transcriptional regulator, TetR family;[Desulfatibacillum alkenivorans] Length = 199 Score = 59.7 bits (143), Expect = 1e-07 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 7/111 (6%) Query: 19 VLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXXXXXXXXXTARG 78 VL A++LFA +G A S+RD+A ++GVN GLI RH G+K G Sbjct: 17 VLEAASELFANKGVAGVSVRDIAAKAGVNHGLIHRHFGSKEVLRRQTQEKLSADLIGEMG 76 Query: 79 TDAPEEVIEAHV-------ERSWKVIARALLDGYDVGALQHRFPVVEELVE 122 + E + + W+V+AR LLDG G +Q FP V+ V+ Sbjct: 77 PGSSFEETMSMAWAALLKHDAYWRVLARTLLDGKWQGEIQSDFPFVDLAVQ 127 >tr|A8L3P0|A8L3P0_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 229 Score = 52.0 bits (123), Expect = 2e-05 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 8 QRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXX 67 +RDA AR R +L AADLFAERG A T++R V +R+GV+ LI R+ G K Sbjct: 6 RRDA-ARSRQALLAAAADLFAERGYAGTAIRSVGDRAGVDPALIARYFGGKEGLYQAVLA 64 Query: 68 XXXXXXXTARGTDAPEEVIEAHV 90 +A D P A V Sbjct: 65 ADPLIEQSAPSADGPPAAPHAPV 87 >tr|D3DB58|D3DB58_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp. EUN1f] Length = 262 Score = 51.6 bits (122), Expect = 3e-05 Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Query: 8 QRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 +RDA AR R +L AADLFAERG A T++R V +R+GV+ LI R+ G K Sbjct: 6 RRDA-ARSRQALLAAAADLFAERGYAGTAIRSVGDRAGVDPALIARYFGGK 55 >tr|A4F9M2|A4F9M2_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator, TetR family;[Saccharopolyspora erythraea] Length = 188 Score = 51.2 bits (121), Expect = 4e-05 Identities = 27/56 (48%), Positives = 37/56 (66%) Query: 3 TASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 +AS +R A R +L AA+LFAERG ++RDVA R+GVN L+FR+ G+K Sbjct: 2 SASPRRRRDSAATREALLRAAAELFAERGFEQATVRDVAARAGVNQALLFRYFGSK 57 >tr|A4FF92|A4FF92_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator (TetR/AcrR family);[Saccharopolyspora erythraea] Length = 208 Score = 48.9 bits (115), Expect = 2e-04 Identities = 23/55 (41%), Positives = 38/55 (69%) Query: 4 ASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 +SG + +G+R R +L AADLFA RG AT++RD+A+ +G+ +G ++ H +K Sbjct: 6 SSGTRGPSGSRRRAELLAIAADLFARRGFQATTVRDIADAAGILSGSLYHHFDSK 60 >tr|D3CHV6|D3CHV6_9ACTO Tax_Id=648999 SubName: Full=Transcriptional regulator, TetR family;[Micromonospora sp. L5] Length = 218 Score = 48.5 bits (114), Expect = 3e-04 Identities = 41/107 (38%), Positives = 49/107 (45%), Gaps = 16/107 (14%) Query: 8 QRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXX 67 +RD R +VL A LFAERG A S+RDVA +GV+A + H G K Sbjct: 10 RRDDQRPTRDLVLAAATALFAERGFDAVSVRDVAAAAGVDAATVVHHTGTKAQLYEACF- 68 Query: 68 XXXXXXXTARGTDAPEEVIEAHVERSWKVIA-------RALLDGYDV 107 AR A EVIEA ER+ +A RAL D DV Sbjct: 69 --------ARVFSAEREVIEAAGERARAALAAGPQDALRALHDLVDV 107 >tr|D1VET1|D1VET1_9ACTO Tax_Id=298654 SubName: Full=Transcriptional regulator, TetR family; Flags: Fragment;[Frankia sp. EuI1c] Length = 222 Score = 48.5 bits (114), Expect = 3e-04 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%) Query: 10 DAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 DAG R R +L A +LFAERG T+LR VAER+GV+A LI R+ G K Sbjct: 1 DAG-RSRARLLAAATELFAERGYTGTALRAVAERAGVDAALIARYYGGK 48 >tr|D1S2X4|D1S2X4_9ACTO Tax_Id=644283 SubName: Full=Transcriptional regulator, TetR family;[Micromonospora aurantiaca ATCC 27029] Length = 218 Score = 48.5 bits (114), Expect = 3e-04 Identities = 41/107 (38%), Positives = 49/107 (45%), Gaps = 16/107 (14%) Query: 8 QRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXXXXXXXXX 67 +RD R +VL A LFAERG A S+RDVA +GV+A + H G K Sbjct: 10 RRDDQRPTRDLVLAAATALFAERGFDAVSVRDVAAAAGVDAATVVHHTGTKAQLYDACF- 68 Query: 68 XXXXXXXTARGTDAPEEVIEAHVERSWKVIA-------RALLDGYDV 107 AR A EVIEA ER+ +A RAL D DV Sbjct: 69 --------ARVFSAEREVIEAAGERARAALAAGPQDALRALHDLVDV 107 >tr|Q9RCV4|Q9RCV4_STRCO Tax_Id=1902 SubName: Full=Putative TetR-family regulator;[Streptomyces coelicolor] Length = 212 Score = 47.8 bits (112), Expect = 5e-04 Identities = 26/57 (45%), Positives = 33/57 (57%) Query: 2 TTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 T +GG+R R R +LT A FAERG ATSLR +AE +GV+ L+ G K Sbjct: 18 TKHAGGRRPGETRTREAILTAARVCFAERGFDATSLRRIAETAGVDQSLVHHFYGTK 74 >tr|D6EWX2|D6EWX2_STRLI Tax_Id=457428 SubName: Full=TetR family transcriptional regulator;[Streptomyces lividans TK24] Length = 246 Score = 47.8 bits (112), Expect = 5e-04 Identities = 26/57 (45%), Positives = 33/57 (57%) Query: 2 TTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 T +GG+R R R +LT A FAERG ATSLR +AE +GV+ L+ G K Sbjct: 52 TKHAGGRRPGETRTREAILTAARVCFAERGFDATSLRRIAETAGVDQSLVHHFYGTK 108 >tr|D2BAT2|D2BAT2_STRRD Tax_Id=479432 SubName: Full=Putative transcriptional regulator, TetR family;[Streptosporangium roseum] Length = 193 Score = 47.4 bits (111), Expect = 6e-04 Identities = 24/43 (55%), Positives = 30/43 (69%) Query: 16 RPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 R ++LT AA LFAE+G T+ DVAERSG++ G I H GNK Sbjct: 13 RELILTAAAQLFAEKGYRQTTFIDVAERSGISRGSIPWHFGNK 55 >tr|A8L7D5|A8L7D5_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 291 Score = 47.4 bits (111), Expect = 6e-04 Identities = 23/54 (42%), Positives = 33/54 (61%) Query: 5 SGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 +G R G R +L+ A +LFAERG A TS+RD++ER GV ++ H +K Sbjct: 3 AGHVRPQGVDTRTRILSAAVELFAERGYAGTSVRDISERLGVTKAALYYHFSSK 56 >tr|A6V4K7|A6V4K7_PSEA7 Tax_Id=381754 SubName: Full=Transcriptional regulator, TetR family;[Pseudomonas aeruginosa] Length = 205 Score = 47.0 bits (110), Expect = 8e-04 Identities = 24/51 (47%), Positives = 33/51 (64%) Query: 8 QRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 +++ + R +L A DLF+ RG AA SLRD+AER GVN +I H G+K Sbjct: 7 KQERSEQTRTDILQTALDLFSTRGFAAVSLRDIAERVGVNHAMIRYHFGSK 57 >tr|A8M5R7|A8M5R7_SALAI Tax_Id=391037 SubName: Full=Transcriptional regulator, TetR family;[Salinispora arenicola] Length = 224 Score = 46.6 bits (109), Expect = 0.001 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 1 MTTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKXX 60 MTT + R ++ A +LFAE+G AT++R++A+ +G+ +G ++ H +K Sbjct: 1 MTTKKASNASLPSERRARLVRLAGELFAEKGFRATTVREIADAAGILSGSLYHHFDSKES 60 Query: 61 XXXXXXXXXXXXXXT-----ARGTDAPEEVIEAHVERSWKVIAR 99 T A GTD P IE V S +AR Sbjct: 61 IGDEILSGFLDEVLTGYREAAAGTDDPRTTIEQFVRSSAATLAR 104 >tr|D3D905|D3D905_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp. EUN1f] Length = 350 Score = 46.6 bits (109), Expect = 0.001 Identities = 24/53 (45%), Positives = 30/53 (56%) Query: 6 GGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 G R GA R +L A LF ERG A TS+RD+AER GV ++ H +K Sbjct: 4 GRTRAQGADTRTRILEAAVQLFVERGYAGTSVRDIAERLGVTKAALYYHFSSK 56 >tr|D2PX23|D2PX23_KRIFD Tax_Id=479435 SubName: Full=Transcriptional regulator, TetR family;[Kribbella flavida] Length = 194 Score = 46.2 bits (108), Expect = 0.001 Identities = 25/58 (43%), Positives = 34/58 (58%) Query: 1 MTTASGGQRDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 MT S G+R G R +L A + FA +G AATS+R VA +GV+A L+ + G K Sbjct: 1 MTARSPGRRPGGPDTRGEILRAARESFAGKGFAATSIRGVARDAGVDAALVHHYFGGK 58 >tr|B2HPE2|B2HPE2_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulator;[Mycobacterium marinum] Length = 204 Score = 46.2 bits (108), Expect = 0.001 Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 4/50 (8%) Query: 9 RDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 R A ARIR L LFAERGP A ++RD+A +GV+ L+ RH G+K Sbjct: 8 RTARARIRDEALR----LFAERGPDAVTMRDIATAAGVSPALLIRHYGSK 53 >tr|A0PNV2|A0PNV2_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulator;[Mycobacterium ulcerans] Length = 204 Score = 46.2 bits (108), Expect = 0.001 Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 4/50 (8%) Query: 9 RDAGARIRPVVLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNK 58 R A ARIR L LFAERGP A ++RD+A +GV+ L+ RH G+K Sbjct: 8 RTARARIRDEALR----LFAERGPDAVTMRDIATAAGVSPALLIRHYGSK 53 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.320 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,113,265,281 Number of extensions: 31713310 Number of successful extensions: 82499 Number of sequences better than 10.0: 3136 Number of HSP's gapped: 82818 Number of HSP's successfully gapped: 3137 Length of query: 169 Length of database: 4,236,830,644 Length adjustment: 128 Effective length of query: 41 Effective length of database: 2,635,824,052 Effective search space: 108068786132 Effective search space used: 108068786132 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 75 (33.5 bits)