BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_0186
         (164 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QNW4|A0QNW4_MYCS2 Tax_Id=246196 SubName: Full=MmpS2 protein...   331   2e-89
tr|A0QYA0|A0QYA0_MYCS2 Tax_Id=246196 SubName: Full=MmpS2 protein...   275   1e-72
tr|Q1B084|Q1B084_MYCSS Tax_Id=164756 SubName: Full=Mycobacterium...   210   4e-53
tr|A1UQR5|A1UQR5_MYCSK Tax_Id=189918 SubName: Full=Mycobacterium...   210   4e-53
tr|B1MM52|B1MM52_MYCA9 Tax_Id=561007 SubName: Full=Probable cons...   204   4e-51
tr|B1MF32|B1MF32_MYCA9 Tax_Id=561007 SubName: Full=Putative memb...   196   1e-48
tr|Q73V84|Q73V84_MYCPA Tax_Id=1770 (mmpS2)SubName: Full=MmpS2;[M...   188   2e-46
tr|A0QJM5|A0QJM5_MYCA1 Tax_Id=243243 SubName: Full=MmpS2 protein...   187   4e-46
tr|D5PII4|D5PII4_9MYCO Tax_Id=525368 (mmpS8)SubName: Full=MmpS2;...   177   3e-43
tr|B1MP67|B1MP67_MYCA9 Tax_Id=561007 SubName: Full=Putative memb...   121   2e-26
tr|A0QS79|A0QS79_MYCS2 Tax_Id=246196 SubName: Full=MmpS5 protein...   109   1e-22
sp|P54880|MMPS4_MYCLE Tax_Id=1769 RecName: Full=Putative membran...   103   7e-21
tr|B8ZT44|B8ZT44_MYCLB Tax_Id=561304 SubName: Full=Conserved sma...   103   7e-21
tr|A0QPZ8|A0QPZ8_MYCS2 Tax_Id=246196 SubName: Full=MmpS1 protein...   103   7e-21
tr|B2HPY7|B2HPY7_MYCMM Tax_Id=216594 (mmpS1_1)SubName: Full=Cons...   102   2e-20
tr|D5PAE7|D5PAE7_9MYCO Tax_Id=525368 (mmpS)SubName: Full=MmpS fa...   102   2e-20
tr|Q73XS1|Q73XS1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   101   3e-20
tr|B2HMD9|B2HMD9_MYCMM Tax_Id=216594 (mmpS5_1)SubName: Full=Cons...   101   3e-20
tr|C6DT92|C6DT92_MYCTK Tax_Id=478434 SubName: Full=Membrane prot...   100   4e-20
tr|C1AKI6|C1AKI6_MYCBT Tax_Id=561275 (mmpS2)SubName: Full=Putati...   100   4e-20
tr|A5WJM1|A5WJM1_MYCTF Tax_Id=336982 SubName: Full=Membrane prot...   100   4e-20
tr|A5TZN6|A5TZN6_MYCTA Tax_Id=419947 (mmpS2)SubName: Full=Putati...   100   4e-20
tr|A1KFY2|A1KFY2_MYCBP Tax_Id=410289 (mmpS2)SubName: Full=Probab...   100   4e-20
tr|D6FZ20|D6FZ20_MYCTU Tax_Id=478435 SubName: Full=Membrane prot...   100   4e-20
tr|D6FYB7|D6FYB7_MYCTU Tax_Id=611304 SubName: Full=Membrane prot...   100   4e-20
tr|D6FE03|D6FE03_MYCTU Tax_Id=611303 SubName: Full=Membrane prot...   100   4e-20
tr|D6F1B0|D6F1B0_MYCTU Tax_Id=611302 SubName: Full=Membrane prot...   100   4e-20
tr|D5ZCN2|D5ZCN2_MYCTU Tax_Id=537210 SubName: Full=Membrane prot...   100   4e-20
tr|D5Z085|D5Z085_MYCTU Tax_Id=537209 SubName: Full=Membrane prot...   100   4e-20
tr|D5YNF0|D5YNF0_MYCTU Tax_Id=515616 SubName: Full=Membrane prot...   100   4e-20
tr|D5YCJ0|D5YCJ0_MYCTU Tax_Id=520140 SubName: Full=Membrane prot...   100   4e-20
tr|D5Y0H5|D5Y0H5_MYCTU Tax_Id=520141 SubName: Full=Membrane prot...   100   4e-20
tr|D5XQC7|D5XQC7_MYCTU Tax_Id=515617 SubName: Full=Membrane prot...   100   4e-20
tr|A2VFJ1|A2VFJ1_MYCTU Tax_Id=348776 SubName: Full=Membrane prot...   100   4e-20
sp|P65376|MMPS2_MYCTU Tax_Id=1773 (mmpS2)RecName: Full=Putative ...   100   6e-20
sp|P65377|MMPS2_MYCBO Tax_Id=1765 (mmpS2)RecName: Full=Putative ...   100   6e-20
tr|B1MBV8|B1MBV8_MYCA9 Tax_Id=561007 SubName: Full=Putative memb...   100   6e-20
tr|A4KEJ2|A4KEJ2_MYCTU Tax_Id=395095 SubName: Full=Membrane prot...   100   6e-20
tr|D5PH99|D5PH99_9MYCO Tax_Id=525368 (mmpS3)SubName: Full=MmpS f...    99   1e-19
sp|P0A5K0|MMPS1_MYCTU Tax_Id=1773 (mmpS1)RecName: Full=Putative ...    99   2e-19
sp|P0A5K1|MMPS1_MYCBO Tax_Id=1765 (mmpS1)RecName: Full=Putative ...    99   2e-19
tr|C6DSJ3|C6DSJ3_MYCTK Tax_Id=478434 SubName: Full=Membrane prot...    99   2e-19
tr|C1AK78|C1AK78_MYCBT Tax_Id=561275 (mmpS1)SubName: Full=Putati...    99   2e-19
tr|A5WJB2|A5WJB2_MYCTF Tax_Id=336982 SubName: Full=Membrane prot...    99   2e-19
tr|D5XQ17|D5XQ17_MYCTU Tax_Id=515617 SubName: Full=Membrane prot...    99   2e-19

>tr|A0QNW4|A0QNW4_MYCS2 Tax_Id=246196 SubName: Full=MmpS2
           protein;[Mycobacterium smegmatis]
          Length = 164

 Score =  331 bits (848), Expect = 2e-89
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MTLVAVKPPARKTGERTTARRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPV 60
           MTLVAVKPPARKTGERTTARRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPV
Sbjct: 1   MTLVAVKPPARKTGERTTARRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPV 60

Query: 61  PTVLAAQAPEQFTPKRMTYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTV 120
           PTVLAAQAPEQFTPKRMTYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTV
Sbjct: 61  PTVLAAQAPEQFTPKRMTYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTV 120

Query: 121 VSGSISAQVQGGEVGCRILVNDVVRDERSSTHANADVTCRVKSA 164
           VSGSISAQVQGGEVGCRILVNDVVRDERSSTHANADVTCRVKSA
Sbjct: 121 VSGSISAQVQGGEVGCRILVNDVVRDERSSTHANADVTCRVKSA 164


>tr|A0QYA0|A0QYA0_MYCS2 Tax_Id=246196 SubName: Full=MmpS2
           protein;[Mycobacterium smegmatis]
          Length = 164

 Score =  275 bits (703), Expect = 1e-72
 Identities = 133/164 (81%), Positives = 148/164 (90%)

Query: 1   MTLVAVKPPARKTGERTTARRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPV 60
           MTLVA    A + G+RTT RR+VVP  LQKGWLPAV VIA+G+GS+ VWKVHEMSAP PV
Sbjct: 1   MTLVATDQHACEAGDRTTTRRSVVPRTLQKGWLPAVAVIAVGVGSVTVWKVHEMSAPVPV 60

Query: 61  PTVLAAQAPEQFTPKRMTYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTV 120
            TVLAAQAPEQFTPKRMTYELFGSPG+GG+LTYVD++G+PHRVD++ELPWSHTETTTLTV
Sbjct: 61  ATVLAAQAPEQFTPKRMTYELFGSPGSGGLLTYVDVDGHPHRVDIAELPWSHTETTTLTV 120

Query: 121 VSGSISAQVQGGEVGCRILVNDVVRDERSSTHANADVTCRVKSA 164
           VSGSIS QV+GGEVGCRILVND VRDE SS+HANADVTCRVKSA
Sbjct: 121 VSGSISGQVKGGEVGCRILVNDRVRDEHSSSHANADVTCRVKSA 164


>tr|Q1B084|Q1B084_MYCSS Tax_Id=164756 SubName: Full=Mycobacterium
           membrane; Flags: Precursor;[Mycobacterium sp.]
          Length = 147

 Score =  210 bits (535), Expect = 4e-53
 Identities = 101/145 (69%), Positives = 119/145 (82%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTPKRMTY 79
           +R+VV  AL + WLP    I +G+G L +WKVH+ SAPGPV  V   QAPEQFTPK++TY
Sbjct: 3   QRSVVRAALARTWLPLTAAIVVGVGGLGMWKVHQSSAPGPVIAVNGPQAPEQFTPKQLTY 62

Query: 80  ELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRIL 139
           EL G+ G GGML+YVDI+G+PH V ++ELPWSHTETTTLTVVSGSISAQVQGGEVGCRIL
Sbjct: 63  ELDGTLGGGGMLSYVDIDGHPHTVQLTELPWSHTETTTLTVVSGSISAQVQGGEVGCRIL 122

Query: 140 VNDVVRDERSSTHANADVTCRVKSA 164
           VN VV DE+S+T  +ADVTCRVKSA
Sbjct: 123 VNGVVHDEQSATRQDADVTCRVKSA 147


>tr|A1UQR5|A1UQR5_MYCSK Tax_Id=189918 SubName: Full=Mycobacterium
           membrane family protein; Flags: Precursor;[Mycobacterium
           sp.]
          Length = 147

 Score =  210 bits (535), Expect = 4e-53
 Identities = 101/145 (69%), Positives = 119/145 (82%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTPKRMTY 79
           +R+VV  AL + WLP    I +G+G L +WKVH+ SAPGPV  V   QAPEQFTPK++TY
Sbjct: 3   QRSVVRAALARTWLPLTAAIVVGVGGLGMWKVHQSSAPGPVIAVNGPQAPEQFTPKQLTY 62

Query: 80  ELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRIL 139
           EL G+ G GGML+YVDI+G+PH V ++ELPWSHTETTTLTVVSGSISAQVQGGEVGCRIL
Sbjct: 63  ELDGTLGGGGMLSYVDIDGHPHTVQLTELPWSHTETTTLTVVSGSISAQVQGGEVGCRIL 122

Query: 140 VNDVVRDERSSTHANADVTCRVKSA 164
           VN VV DE+S+T  +ADVTCRVKSA
Sbjct: 123 VNGVVHDEQSATRQDADVTCRVKSA 147


>tr|B1MM52|B1MM52_MYCA9 Tax_Id=561007 SubName: Full=Probable
           conserved membrane protein, MmpS;[Mycobacterium
           abscessus]
          Length = 147

 Score =  204 bits (518), Expect = 4e-51
 Identities = 96/144 (66%), Positives = 119/144 (82%)

Query: 21  RTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTPKRMTYE 80
           R+V   AL + W+P V  IALG+ S+++WKVH+MSAP PV TV   QAP +FTPK +TYE
Sbjct: 4   RSVGRTALARAWMPLVAAIALGVASVSMWKVHQMSAPEPVITVNQPQAPPEFTPKTLTYE 63

Query: 81  LFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILV 140
           +FG+PG GGML+YVDI+G+PH+ +V+ LPWSHTETTTLTVVSGSIS QV+GG+VGCRI V
Sbjct: 64  VFGAPGEGGMLSYVDIDGHPHQENVTTLPWSHTETTTLTVVSGSISVQVRGGQVGCRIRV 123

Query: 141 NDVVRDERSSTHANADVTCRVKSA 164
           NDVVRD+ S  HA+A+V CRVKSA
Sbjct: 124 NDVVRDQMSDDHADANVMCRVKSA 147


>tr|B1MF32|B1MF32_MYCA9 Tax_Id=561007 SubName: Full=Putative
           membrane protein, MmpS family;[Mycobacterium abscessus]
          Length = 146

 Score =  196 bits (497), Expect = 1e-48
 Identities = 91/145 (62%), Positives = 120/145 (82%), Gaps = 1/145 (0%)

Query: 19  ARRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTPKRMT 78
           +RR+VV   L + W+P V+++A+ +G++A+WKVH+ S+P PV TV   QAP+ FT KR+T
Sbjct: 2   SRRSVVRPILARAWMPLVSIVAVSVGAVAMWKVHDSSSPPPVFTVNGPQAPDSFTQKRLT 61

Query: 79  YELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRI 138
           Y++FG+ G+G ML+YVD+ G+PH+ D ++LPWSHTETTTLTVVSGSIS QV+GGEVGCRI
Sbjct: 62  YQVFGT-GSGAMLSYVDVYGHPHQADGADLPWSHTETTTLTVVSGSISVQVRGGEVGCRI 120

Query: 139 LVNDVVRDERSSTHANADVTCRVKS 163
           LVNDVVRDE+   H +ADVTCRVKS
Sbjct: 121 LVNDVVRDEKFDDHHDADVTCRVKS 145


>tr|Q73V84|Q73V84_MYCPA Tax_Id=1770 (mmpS2)SubName:
           Full=MmpS2;[Mycobacterium paratuberculosis]
          Length = 147

 Score =  188 bits (477), Expect = 2e-46
 Identities = 88/144 (61%), Positives = 111/144 (77%)

Query: 21  RTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTPKRMTYE 80
           R+     L + W+P V V+A+G+G L ++KVH+ S P PV TV   QAPEQF  KR+TYE
Sbjct: 4   RSTGRAVLARIWMPLVAVVAVGVGLLCMYKVHQFSEPEPVITVNGPQAPEQFNLKRITYE 63

Query: 81  LFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILV 140
           +FGS G GG L YVDI+G+PH+VD++ LPW+HTE+TTL+V SGSIS  V GG+VGCR+LV
Sbjct: 64  VFGSAGQGGKLVYVDIDGHPHQVDITTLPWTHTESTTLSVASGSISVHVHGGQVGCRMLV 123

Query: 141 NDVVRDERSSTHANADVTCRVKSA 164
           NDVVRDE+S  H +ADV CRVKSA
Sbjct: 124 NDVVRDEQSGNHQDADVQCRVKSA 147


>tr|A0QJM5|A0QJM5_MYCA1 Tax_Id=243243 SubName: Full=MmpS2
           protein;[Mycobacterium avium]
          Length = 138

 Score =  187 bits (475), Expect = 4e-46
 Identities = 87/137 (63%), Positives = 109/137 (79%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTPKRMTYELFGSPGN 87
           L + W+P V V+A+G+G L ++KVH+ S P PV TV   QAPEQF  KR+TYE+FGS G 
Sbjct: 2   LARIWMPLVAVVAVGVGLLCMYKVHQFSEPEPVITVNGPQAPEQFNLKRITYEVFGSVGQ 61

Query: 88  GGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVRDE 147
           GG L YVDI+G+PH+VD++ LPW+HTE+TTL+V SGSIS  V GG+VGCR+LVNDVVRDE
Sbjct: 62  GGKLVYVDIDGHPHQVDITTLPWTHTESTTLSVASGSISVHVHGGQVGCRMLVNDVVRDE 121

Query: 148 RSSTHANADVTCRVKSA 164
           +S  H +ADV CRVKSA
Sbjct: 122 QSGNHQDADVQCRVKSA 138


>tr|D5PII4|D5PII4_9MYCO Tax_Id=525368 (mmpS8)SubName:
           Full=MmpS2;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 132

 Score =  177 bits (450), Expect = 3e-43
 Identities = 82/132 (62%), Positives = 105/132 (79%)

Query: 33  LPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTPKRMTYELFGSPGNGGMLT 92
           +P VTV+A+G+G L ++KVH+ S P PV TV   QAPEQF  KR+TYE+FG  GNGG L 
Sbjct: 1   MPLVTVVAVGVGLLCMYKVHQFSEPEPVITVNGPQAPEQFNLKRITYEVFGDAGNGGKLV 60

Query: 93  YVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVRDERSSTH 152
           Y+DI+G+PH+V+++ LPWSHTETTTL+V SGSIS  V+ G+V CR+LV+ VVRDE+S  H
Sbjct: 61  YIDIDGHPHQVEITSLPWSHTETTTLSVASGSISVHVRSGQVSCRMLVDGVVRDEQSDDH 120

Query: 153 ANADVTCRVKSA 164
            +ADV CRVKSA
Sbjct: 121 PDADVECRVKSA 132


>tr|B1MP67|B1MP67_MYCA9 Tax_Id=561007 SubName: Full=Putative
           membrane protein MmpS;[Mycobacterium abscessus]
          Length = 152

 Score =  121 bits (304), Expect = 2e-26
 Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 1/138 (0%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEMSAP-GPVPTVLAAQAPEQFTPKRMTYELFGSPG 86
           ++ GWL  V  +   + S++V KV  +SAP GPV +   A     F PK + Y +FG   
Sbjct: 15  IRHGWLVVVIAVVASLASVSVMKVRALSAPSGPVVSPKGAPKLPSFAPKHVVYMVFGESA 74

Query: 87  NGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVRD 146
             G LTY+D++  PHRVD + LPW+H E TT T +  ++ AQ  G E+GCRI+VN  VRD
Sbjct: 75  GTGTLTYLDVDSRPHRVDFTTLPWTHEEVTTRTSMLANLMAQSTGDELGCRIIVNGEVRD 134

Query: 147 ERSSTHANADVTCRVKSA 164
           E+  +     V C+VKSA
Sbjct: 135 EQVQSREQGSVACKVKSA 152


>tr|A0QS79|A0QS79_MYCS2 Tax_Id=246196 SubName: Full=MmpS5
           protein;[Mycobacterium smegmatis]
          Length = 138

 Score =  109 bits (272), Expect = 1e-22
 Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 2/134 (1%)

Query: 32  WLPAVTVIALGIGSLAVWKVHEMSAPGPVP-TVLAAQAPEQFTPKRMTYELFGSPGNGGM 90
           WLP + V+A+  G+L V  V  +    PV  T   +   E F PK +TYE+FGS G+  +
Sbjct: 6   WLPVLIVVAVAAGALIVMNVRTVFGSNPVVVTEKTSDNAEDFNPKVVTYEIFGS-GSSAV 64

Query: 91  LTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVRDERSS 150
           + Y+D+EG P RV+ + LPWS T  TTL  V   I AQ  G  + CR+ V+DVV++ER++
Sbjct: 65  INYMDLEGMPQRVESTPLPWSLTLQTTLPSVMPHIMAQGDGDSITCRVTVDDVVKEERTA 124

Query: 151 THANADVTCRVKSA 164
           T  NA+  C VK+A
Sbjct: 125 TGMNAETFCYVKAA 138


>sp|P54880|MMPS4_MYCLE Tax_Id=1769 RecName: Full=Putative membrane
           protein mmpS4;[Mycobacterium leprae]
          Length = 154

 Score =  103 bits (257), Expect = 7e-21
 Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 2/139 (1%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQ--APEQFTPKRMTYELFGSP 85
           L + W+P V ++ L +G   V++VH   A     +   +   + + F PK++ YE+FG P
Sbjct: 16  LSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSKPFNPKQIVYEVFGPP 75

Query: 86  GNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVR 145
           G    ++Y D   +P R+D ++LPWS   TTTL  V G++ AQ     +GCRI+V+ VV+
Sbjct: 76  GTVADISYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVK 135

Query: 146 DERSSTHANADVTCRVKSA 164
            ER S   NA   C VKSA
Sbjct: 136 AERVSNEVNAYTYCLVKSA 154


>tr|B8ZT44|B8ZT44_MYCLB Tax_Id=561304 SubName: Full=Conserved small
           membrane protein;[Mycobacterium leprae]
          Length = 154

 Score =  103 bits (257), Expect = 7e-21
 Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 2/139 (1%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQ--APEQFTPKRMTYELFGSP 85
           L + W+P V ++ L +G   V++VH   A     +   +   + + F PK++ YE+FG P
Sbjct: 16  LSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSKPFNPKQIVYEVFGPP 75

Query: 86  GNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVR 145
           G    ++Y D   +P R+D ++LPWS   TTTL  V G++ AQ     +GCRI+V+ VV+
Sbjct: 76  GTVADISYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVK 135

Query: 146 DERSSTHANADVTCRVKSA 164
            ER S   NA   C VKSA
Sbjct: 136 AERVSNEVNAYTYCLVKSA 154


>tr|A0QPZ8|A0QPZ8_MYCS2 Tax_Id=246196 SubName: Full=MmpS1
           protein;[Mycobacterium smegmatis]
          Length = 138

 Score =  103 bits (257), Expect = 7e-21
 Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 2/138 (1%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAP-EQFTPKRMTYELFGSPG 86
           L++ W+P V  + L +  L VW++HE      +     A     QF PK + YE++G PG
Sbjct: 2   LKQAWIPLVLAVVLPVSGLVVWRLHEKFGSEDLNANAGAGIEIVQFNPKILVYEVYGPPG 61

Query: 87  NGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVRD 146
           +   ++Y D + N H V+ + LPWS T +TTL  VS ++ A     E+GCR+ VN +VR+
Sbjct: 62  STAQISYFDTDANVHSVNTT-LPWSVTLSTTLPTVSANLMALGSNDEIGCRVTVNGIVRE 120

Query: 147 ERSSTHANADVTCRVKSA 164
           E+S+   +A   C VKSA
Sbjct: 121 EKSANGIDAQTYCLVKSA 138


>tr|B2HPY7|B2HPY7_MYCMM Tax_Id=216594 (mmpS1_1)SubName:
           Full=Conserved membrane protein MmpS1_1;[Mycobacterium
           marinum]
          Length = 142

 Score =  102 bits (254), Expect = 2e-20
 Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 26  GALQKGWLPAVTVIALGIGSLAVWKVH-EMSAPGPVPTVLAAQAPEQFTPKRMTYELFGS 84
           G +++ W+P V +I + +G+  V ++H    +P   P    A +   F PKR+ YE+ G 
Sbjct: 3   GVIRRIWIPTVMIIVVAVGAAVVVRLHGAFGSPRNRPGSSNADSIVAFNPKRVLYEVTGP 62

Query: 85  PGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVV 144
           PG+   + Y+D E  PH V  + +PWS T  TTL+ V  ++ A+     +GCRI VN VV
Sbjct: 63  PGSLATINYLDAEAQPHEVTNAAIPWSLTVVTTLSAVIANVVARSDSTSLGCRITVNGVV 122

Query: 145 RDERSSTHANADVTCRVKSA 164
           R ER     NA  +C VKSA
Sbjct: 123 RAEREVESYNAHTSCLVKSA 142


>tr|D5PAE7|D5PAE7_9MYCO Tax_Id=525368 (mmpS)SubName: Full=MmpS
           family membrane protein;[Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 143

 Score =  102 bits (253), Expect = 2e-20
 Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 2/138 (1%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQFTP--KRMTYELFGSP 85
           L++ W+P V V A+ +G +A+ ++  +    P+ T   + A        KR+TYE++G  
Sbjct: 5   LKRAWVPLVVVAAVALGGIAIDRLRGVFGSDPIFTATGSSAEPLVASHIKRVTYEVYGPS 64

Query: 86  GNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVR 145
           G  G ++Y++    P + D S LPW+ T TTT+  V  S+ AQ    ++GCRI VN  V+
Sbjct: 65  GTTGSVSYLNKNAQPEQADFSTLPWTFTITTTVPAVIASVVAQGDSDDIGCRISVNGEVK 124

Query: 146 DERSSTHANADVTCRVKS 163
           DERSS   NA  +C VK+
Sbjct: 125 DERSSAGRNAQTSCLVKA 142


>tr|Q73XS1|Q73XS1_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 164

 Score =  101 bits (251), Expect = 3e-20
 Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 3/153 (1%)

Query: 14  GERTTARRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPE--Q 71
           G  + +R  V+  A ++ W+P V V+ L + +L V ++H++     +    A +  E  Q
Sbjct: 13  GPNSESRPGVLSRARKQAWIPLVLVVVLAVSALIVSRLHKIFGSEDL-NANAGKGIEIVQ 71

Query: 72  FTPKRMTYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQG 131
           F PK + YE+ G+PG+   + Y D   N H+V+ + LPWS T +TTL  VS +I AQ  G
Sbjct: 72  FNPKVVVYEISGAPGSTANINYWDENANTHQVNNAPLPWSTTISTTLPSVSANIMAQSDG 131

Query: 132 GEVGCRILVNDVVRDERSSTHANADVTCRVKSA 164
             + C+I V+ VVRD ++S   NA   C VKSA
Sbjct: 132 STISCKITVDGVVRDNQNSDGHNAQTFCLVKSA 164


>tr|B2HMD9|B2HMD9_MYCMM Tax_Id=216594 (mmpS5_1)SubName:
           Full=Conserved membrane protein MmpS5_1;[Mycobacterium
           marinum]
          Length = 147

 Score =  101 bits (251), Expect = 3e-20
 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 1/142 (0%)

Query: 24  VPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAP-EQFTPKRMTYELF 82
           V   L++ W+P + V+ L I  L V ++H++     +     A     QF PK + YE+ 
Sbjct: 6   VTSVLKRAWIPLLMVVVLAISGLVVSRLHKIFGSEDLNANAGAGIDIVQFNPKVVIYEIS 65

Query: 83  GSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVND 142
           G  G+   + + D + N H+V+ + LPWS T +TTL  VS +I AQ  G ++GCRI V+ 
Sbjct: 66  GPAGSTANINFWDADANTHQVNAAPLPWSFTISTTLPSVSANIMAQGDGSQIGCRITVDG 125

Query: 143 VVRDERSSTHANADVTCRVKSA 164
           VVR+E+S+   N    C VKSA
Sbjct: 126 VVREEKSAAGVNPQTFCLVKSA 147


>tr|C6DT92|C6DT92_MYCTK Tax_Id=478434 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|C1AKI6|C1AKI6_MYCBT Tax_Id=561275 (mmpS2)SubName: Full=Putative
           membrane protein;[Mycobacterium bovis]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|A5WJM1|A5WJM1_MYCTF Tax_Id=336982 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|A5TZN6|A5TZN6_MYCTA Tax_Id=419947 (mmpS2)SubName: Full=Putative
           conserved membrane protein MmpS2;[Mycobacterium
           tuberculosis]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|A1KFY2|A1KFY2_MYCBP Tax_Id=410289 (mmpS2)SubName: Full=Probable
           conserved membrane protein mmpS2;[Mycobacterium bovis]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D6FZ20|D6FZ20_MYCTU Tax_Id=478435 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis KZN 605]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D6FYB7|D6FYB7_MYCTU Tax_Id=611304 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis K85]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D6FE03|D6FE03_MYCTU Tax_Id=611303 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis CPHL_A]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D6F1B0|D6F1B0_MYCTU Tax_Id=611302 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis T46]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D5ZCN2|D5ZCN2_MYCTU Tax_Id=537210 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis T17]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D5Z085|D5Z085_MYCTU Tax_Id=537209 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis GM 1503]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D5YNF0|D5YNF0_MYCTU Tax_Id=515616 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis 02_1987]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D5YCJ0|D5YCJ0_MYCTU Tax_Id=520140 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis EAS054]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D5Y0H5|D5Y0H5_MYCTU Tax_Id=520141 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis T85]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|D5XQC7|D5XQC7_MYCTU Tax_Id=515617 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis T92]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>tr|A2VFJ1|A2VFJ1_MYCTU Tax_Id=348776 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis C]
          Length = 147

 Score =  100 bits (250), Expect = 4e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 3/146 (2%)

Query: 20  RRTVVPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRM 77
           R   V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+
Sbjct: 2   RMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRV 61

Query: 78  TYELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCR 137
           TYE+FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CR
Sbjct: 62  TYEVFG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR 120

Query: 138 ILVNDVVRDERSSTHANADVTCRVKS 163
           I+VN  V+DERS T   A  +C+V S
Sbjct: 121 IIVNGAVKDERSETSPRALTSCQVSS 146


>sp|P65376|MMPS2_MYCTU Tax_Id=1773 (mmpS2)RecName: Full=Putative
           membrane protein mmpS2;[Mycobacterium tuberculosis]
          Length = 145

 Score =  100 bits (249), Expect = 6e-20
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 24  VPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRMTYEL 81
           V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+TYE+
Sbjct: 4   VSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRVTYEV 63

Query: 82  FGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVN 141
           FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CRI+VN
Sbjct: 64  FG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVN 122

Query: 142 DVVRDERSSTHANADVTCRVKS 163
             V+DERS T   A  +C+V S
Sbjct: 123 GAVKDERSETSPRALTSCQVSS 144


>sp|P65377|MMPS2_MYCBO Tax_Id=1765 (mmpS2)RecName: Full=Putative
           membrane protein mmpS2;[Mycobacterium bovis]
          Length = 145

 Score =  100 bits (249), Expect = 6e-20
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 24  VPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRMTYEL 81
           V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+TYE+
Sbjct: 4   VSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRVTYEV 63

Query: 82  FGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVN 141
           FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CRI+VN
Sbjct: 64  FG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVN 122

Query: 142 DVVRDERSSTHANADVTCRVKS 163
             V+DERS T   A  +C+V S
Sbjct: 123 GAVKDERSETSPRALTSCQVSS 144


>tr|B1MBV8|B1MBV8_MYCA9 Tax_Id=561007 SubName: Full=Putative
           membrane protein, MmpS family;[Mycobacterium abscessus]
          Length = 147

 Score =  100 bits (249), Expect = 6e-20
 Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 13/144 (9%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEM-------SAPGPVPTVLAAQAPEQFTPKRMTYE 80
           + K WLP +  + L    LA+   H +        +PG    V+      QF PK + YE
Sbjct: 10  VNKIWLPTLAFVVLLTAGLAIKFAHGIFGSQDRTHSPGGNFAVV------QFNPKNIVYE 63

Query: 81  LFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILV 140
           +FG  G    ++Y D    P  +  + LPW+HTETT LT  +G I+AQV GG VGCRI V
Sbjct: 64  VFGDYGGWARISYWDTNNRPVDIQPTSLPWTHTETTVLTTATGDITAQVAGGNVGCRITV 123

Query: 141 NDVVRDERSSTHANADVTCRVKSA 164
           + +VR E ++T  +A V C+V SA
Sbjct: 124 DGLVRSEHTATGEHAGVWCQVLSA 147


>tr|A4KEJ2|A4KEJ2_MYCTU Tax_Id=395095 SubName: Full=Membrane protein
           mmpS2;[Mycobacterium tuberculosis str. Haarlem]
          Length = 145

 Score =  100 bits (249), Expect = 6e-20
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 24  VPGALQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPEQ--FTPKRMTYEL 81
           V GA+++ WL    V+   +G L ++++H +      PTV+     +   F PKR+TYE+
Sbjct: 4   VSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRVTYEV 63

Query: 82  FGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVN 141
           FG P     + Y+D +   HR+D   LPWS T  TTL  VS ++ AQ     + CRI+VN
Sbjct: 64  FG-PAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVN 122

Query: 142 DVVRDERSSTHANADVTCRVKS 163
             V+DERS T   A  +C+V S
Sbjct: 123 GAVKDERSETSPRALTSCQVSS 144


>tr|D5PH99|D5PH99_9MYCO Tax_Id=525368 (mmpS3)SubName: Full=MmpS
           family membrane protein;[Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 142

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 3/139 (2%)

Query: 28  LQKGWLPAVTVIALGIGSLAVWKVHEMSAPGPVPTVLAAQAPE--QFTPKRMTYELFGSP 85
           L++ W+P V V+ L + +L V ++H++     +    A +  E  QF PK + Y++ G P
Sbjct: 5   LKRAWIPLVLVVVLALSALIVSRLHKIFGSQDL-NANAGKGIEIVQFNPKVVVYDITGPP 63

Query: 86  GNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRILVNDVVR 145
           G    + Y D   N H+V+ + LPWS T +TTL  VS +I AQ    E+GC+I V+ VVR
Sbjct: 64  GATANINYWDENANTHQVNAAPLPWSTTISTTLPSVSANIMAQSDSSEIGCKITVDGVVR 123

Query: 146 DERSSTHANADVTCRVKSA 164
           ++ SS   NA   C VKSA
Sbjct: 124 EQHSSNGHNAQTFCLVKSA 142


>sp|P0A5K0|MMPS1_MYCTU Tax_Id=1773 (mmpS1)RecName: Full=Putative
           membrane protein mmpS1;[Mycobacterium tuberculosis]
          Length = 142

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 13/146 (8%)

Query: 26  GALQKGWLPAVTVIALGIGSLAVWKVHEM-----SAP--GPVPTVLAAQAPEQFTPKRMT 78
           G  ++ W+P V VI + + ++ V ++H +      AP  G +  ++A      F PK + 
Sbjct: 3   GVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAPDTGNLDPIIA------FYPKHVL 56

Query: 79  YELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRI 138
           YE+FG PG    + Y+D +  PH V  + +PWS T  TTLT V  ++ A+  G  +GCRI
Sbjct: 57  YEVFGPPGTVASINYLDADAQPHEVVNAAVPWSFTIVTTLTAVVANVVARGDGASLGCRI 116

Query: 139 LVNDVVRDERSSTHANADVTCRVKSA 164
            VN+V+R+ER     +A  +C VKSA
Sbjct: 117 TVNEVIREERIVNAYHAHTSCLVKSA 142


>sp|P0A5K1|MMPS1_MYCBO Tax_Id=1765 (mmpS1)RecName: Full=Putative
           membrane protein mmpS1;[Mycobacterium bovis]
          Length = 142

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 13/146 (8%)

Query: 26  GALQKGWLPAVTVIALGIGSLAVWKVHEM-----SAP--GPVPTVLAAQAPEQFTPKRMT 78
           G  ++ W+P V VI + + ++ V ++H +      AP  G +  ++A      F PK + 
Sbjct: 3   GVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAPDTGNLDPIIA------FYPKHVL 56

Query: 79  YELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRI 138
           YE+FG PG    + Y+D +  PH V  + +PWS T  TTLT V  ++ A+  G  +GCRI
Sbjct: 57  YEVFGPPGTVASINYLDADAQPHEVVNAAVPWSFTIVTTLTAVVANVVARGDGASLGCRI 116

Query: 139 LVNDVVRDERSSTHANADVTCRVKSA 164
            VN+V+R+ER     +A  +C VKSA
Sbjct: 117 TVNEVIREERIVNAYHAHTSCLVKSA 142


>tr|C6DSJ3|C6DSJ3_MYCTK Tax_Id=478434 SubName: Full=Membrane protein
           mmpS1;[Mycobacterium tuberculosis]
          Length = 142

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 13/146 (8%)

Query: 26  GALQKGWLPAVTVIALGIGSLAVWKVHEM-----SAP--GPVPTVLAAQAPEQFTPKRMT 78
           G  ++ W+P V VI + + ++ V ++H +      AP  G +  ++A      F PK + 
Sbjct: 3   GVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAPDTGNLDPIIA------FYPKHVL 56

Query: 79  YELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRI 138
           YE+FG PG    + Y+D +  PH V  + +PWS T  TTLT V  ++ A+  G  +GCRI
Sbjct: 57  YEVFGPPGTVASINYLDADAQPHEVVNAAVPWSFTIVTTLTAVVANVVARGDGASLGCRI 116

Query: 139 LVNDVVRDERSSTHANADVTCRVKSA 164
            VN+V+R+ER     +A  +C VKSA
Sbjct: 117 TVNEVIREERIVNAYHAHTSCLVKSA 142


>tr|C1AK78|C1AK78_MYCBT Tax_Id=561275 (mmpS1)SubName: Full=Putative
           membrane protein;[Mycobacterium bovis]
          Length = 142

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 13/146 (8%)

Query: 26  GALQKGWLPAVTVIALGIGSLAVWKVHEM-----SAP--GPVPTVLAAQAPEQFTPKRMT 78
           G  ++ W+P V VI + + ++ V ++H +      AP  G +  ++A      F PK + 
Sbjct: 3   GVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAPDTGNLDPIIA------FYPKHVL 56

Query: 79  YELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRI 138
           YE+FG PG    + Y+D +  PH V  + +PWS T  TTLT V  ++ A+  G  +GCRI
Sbjct: 57  YEVFGPPGTVASINYLDADAQPHEVVNAAVPWSFTIVTTLTAVVANVVARGDGASLGCRI 116

Query: 139 LVNDVVRDERSSTHANADVTCRVKSA 164
            VN+V+R+ER     +A  +C VKSA
Sbjct: 117 TVNEVIREERIVNAYHAHTSCLVKSA 142


>tr|A5WJB2|A5WJB2_MYCTF Tax_Id=336982 SubName: Full=Membrane protein
           mmpS1;[Mycobacterium tuberculosis]
          Length = 142

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 13/146 (8%)

Query: 26  GALQKGWLPAVTVIALGIGSLAVWKVHEM-----SAP--GPVPTVLAAQAPEQFTPKRMT 78
           G  ++ W+P V VI + + ++ V ++H +      AP  G +  ++A      F PK + 
Sbjct: 3   GVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAPDTGNLDPIIA------FYPKHVL 56

Query: 79  YELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRI 138
           YE+FG PG    + Y+D +  PH V  + +PWS T  TTLT V  ++ A+  G  +GCRI
Sbjct: 57  YEVFGPPGTVASINYLDADAQPHEVVNAAVPWSFTIVTTLTAVVANVVARGDGASLGCRI 116

Query: 139 LVNDVVRDERSSTHANADVTCRVKSA 164
            VN+V+R+ER     +A  +C VKSA
Sbjct: 117 TVNEVIREERIVNAYHAHTSCLVKSA 142


>tr|D5XQ17|D5XQ17_MYCTU Tax_Id=515617 SubName: Full=Membrane protein
           mmpS1;[Mycobacterium tuberculosis T92]
          Length = 142

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 13/146 (8%)

Query: 26  GALQKGWLPAVTVIALGIGSLAVWKVHEM-----SAP--GPVPTVLAAQAPEQFTPKRMT 78
           G  ++ W+P V VI + + ++ V ++H +      AP  G +  ++A      F PK + 
Sbjct: 3   GVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAPDTGNLDPIIA------FYPKHVL 56

Query: 79  YELFGSPGNGGMLTYVDIEGNPHRVDVSELPWSHTETTTLTVVSGSISAQVQGGEVGCRI 138
           YE+FG PG    + Y+D +  PH V  + +PWS T  TTLT V  ++ A+  G  +GCRI
Sbjct: 57  YEVFGPPGTVASINYLDADAQPHEVVNAAVPWSFTIVTTLTAVVANVVARGDGASLGCRI 116

Query: 139 LVNDVVRDERSSTHANADVTCRVKSA 164
            VN+V+R+ER     +A  +C VKSA
Sbjct: 117 TVNEVIREERIVNAYHAHTSCLVKSA 142


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.315    0.130    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,397,808,011
Number of extensions: 57541930
Number of successful extensions: 145253
Number of sequences better than 10.0: 255
Number of HSP's gapped: 146880
Number of HSP's successfully gapped: 255
Length of query: 164
Length of database: 4,236,830,644
Length adjustment: 125
Effective length of query: 39
Effective length of database: 2,673,347,644
Effective search space: 104260558116
Effective search space used: 104260558116
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)