BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_0268
         (259 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QP45|A0QP45_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   470   e-131
tr|Q1BFM4|Q1BFM4_MYCSS Tax_Id=164756 SubName: Full=Transcription...   390   e-107
tr|A1U9A8|A1U9A8_MYCSK Tax_Id=189918 SubName: Full=Transcription...   390   e-107
tr|A3PSW4|A3PSW4_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   387   e-106
tr|A4T670|A4T670_MYCGI Tax_Id=350054 SubName: Full=Transcription...   352   2e-95
tr|A1TGN9|A1TGN9_MYCVP Tax_Id=350058 SubName: Full=Transcription...   351   4e-95
tr|C3JQB9|C3JQB9_RHOER Tax_Id=596309 SubName: Full=Transcription...   303   1e-80
tr|D1VMX6|D1VMX6_9ACTO Tax_Id=298654 SubName: Full=Transcription...   199   3e-49
tr|C3JQD0|C3JQD0_RHOER Tax_Id=596309 SubName: Full=Transcription...   191   7e-47
tr|B1MJ89|B1MJ89_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...   186   2e-45
tr|A0QQJ5|A0QQJ5_MYCS2 Tax_Id=246196 SubName: Full=Putative tran...   182   5e-44
tr|Q7BUC5|Q7BUC5_MYCSM Tax_Id=1772 SubName: Full=Putative transc...   182   5e-44
tr|Q7BQA9|Q7BQA9_MYCFO Tax_Id=1766 SubName: Full=Putative transc...   176   2e-42
tr|Q0RVU2|Q0RVU2_RHOSR Tax_Id=101510 SubName: Full=Probable tran...   163   2e-38
tr|D1NV72|D1NV72_9BIFI Tax_Id=561180 SubName: Full=Transcription...   154   1e-35
tr|B6VJI0|B6VJI0_9NOCA Tax_Id=230533 SubName: Full=GntR family t...   153   2e-35
tr|B6VJK0|B6VJK0_9NOCA Tax_Id=230533 SubName: Full=GntR family t...   147   1e-33
tr|Q0RVS2|Q0RVS2_RHOSR Tax_Id=101510 SubName: Full=Probable tran...   144   1e-32
tr|A1T7F2|A1T7F2_MYCVP Tax_Id=350058 SubName: Full=Transcription...   140   2e-31
tr|B1S6A1|B1S6A1_9BIFI Tax_Id=473819 SubName: Full=Putative unch...   137   1e-30
tr|C0BQC1|C0BQC1_9BIFI Tax_Id=547043 SubName: Full=Putative unch...   137   1e-30
tr|D2Q8N5|D2Q8N5_BIFDB Tax_Id=401473 SubName: Full=Putative unch...   137   2e-30
tr|C7MQ08|C7MQ08_SACVD Tax_Id=471857 SubName: Full=Transcription...   127   1e-27
tr|D1ACH1|D1ACH1_THECD Tax_Id=471852 SubName: Full=Transcription...   125   4e-27
tr|D1BUC7|D1BUC7_XYLCX Tax_Id=446471 SubName: Full=Transcription...   124   1e-26
tr|Q2B734|Q2B734_9BACI Tax_Id=313627 SubName: Full=Transcription...   124   1e-26
tr|C5BX21|C5BX21_BEUC1 Tax_Id=471853 SubName: Full=Transcription...   120   2e-25
tr|C1AW73|C1AW73_RHOOB Tax_Id=632772 SubName: Full=Putative GntR...   119   4e-25
tr|A4FP40|A4FP40_SACEN Tax_Id=405948 SubName: Full=Putative GntR...   119   4e-25
tr|C7MHG8|C7MHG8_BRAFD Tax_Id=446465 SubName: Full=Transcription...   119   5e-25
tr|A4F723|A4F723_SACEN Tax_Id=405948 SubName: Full=Putative GntR...   118   6e-25
tr|D3F0V8|D3F0V8_CONWI Tax_Id=469383 SubName: Full=Transcription...   118   8e-25
tr|A8VQ24|A8VQ24_9BACI Tax_Id=439292 SubName: Full=Transcription...   118   8e-25
tr|Q8FN27|Q8FN27_COREF Tax_Id=152794 SubName: Full=Putative tran...   117   1e-24
tr|Q0SGH0|Q0SGH0_RHOSR Tax_Id=101510 SubName: Full=Transcription...   117   1e-24
tr|C8NQT3|C8NQT3_COREF Tax_Id=196164 SubName: Full=Transcription...   117   1e-24
tr|D1CI93|D1CI93_THET1 Tax_Id=525904 SubName: Full=Phophonate C-...   116   2e-24
tr|C6WAF5|C6WAF5_ACTMD Tax_Id=446462 SubName: Full=Transcription...   116   3e-24
tr|C5RAN3|C5RAN3_WEIPA Tax_Id=585506 SubName: Full=GntR family t...   116   3e-24
tr|D3PSJ2|D3PSJ2_MEIRD Tax_Id=504728 SubName: Full=Transcription...   115   4e-24
tr|C7TKE8|C7TKE8_LACRL Tax_Id=568704 (def)SubName: Full=Transcri...   115   4e-24
tr|C7TDR3|C7TDR3_LACRG Tax_Id=568703 (def)SubName: Full=Transcri...   115   4e-24
tr|C2JYC8|C2JYC8_LACRH Tax_Id=525361 SubName: Full=GntR family t...   115   4e-24
tr|B5QMB9|B5QMB9_LACRH Tax_Id=486408 SubName: Full=Transcription...   115   4e-24
tr|D4G1Z9|D4G1Z9_BACNA Tax_Id=645657 (yvoA)SubName: Full=Putativ...   114   9e-24

>tr|A0QP45|A0QP45_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, GntR family protein;[Mycobacterium smegmatis]
          Length = 259

 Score =  470 bits (1209), Expect = e-131
 Identities = 247/259 (95%), Positives = 247/259 (95%)

Query: 1   MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG 60
           MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG
Sbjct: 1   MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG 60

Query: 61  RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY 120
           RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILS            ALRLGPGEY
Sbjct: 61  RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSTRITTPDQTTRTALRLGPGEY 120

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA
Sbjct: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA 240
           VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA
Sbjct: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA 240

Query: 241 SNSGTDNRTASVTLHRQVG 259
           SNSGTDNRTASVTLHRQVG
Sbjct: 241 SNSGTDNRTASVTLHRQVG 259


>tr|Q1BFM4|Q1BFM4_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium sp.]
          Length = 260

 Score =  390 bits (1002), Expect = e-107
 Identities = 202/258 (78%), Positives = 222/258 (86%)

Query: 1   MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG 60
           MP  SEELRRR+VADINAG PGAKLGSERDLAE+YGTSRSSLRQVLAALEEAG+VHRVIG
Sbjct: 1   MPTHSEELRRRIVADINAGIPGAKLGSERDLAERYGTSRSSLRQVLAALEEAGMVHRVIG 60

Query: 61  RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY 120
           R+GGIFISHGQVERNL+DVVGVPAFLANQGYVAGTR+LS            ALRL P ++
Sbjct: 61  RAGGIFISHGQVERNLADVVGVPAFLANQGYVAGTRVLSTKIAPVDDATQAALRLQPTDF 120

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           VVEIQR+RLADGSPISLE AQFPA+ FPGLLEQQLGGS+YEVLE++YGLVPGRADERIEA
Sbjct: 121 VVEIQRLRLADGSPISLELAQFPADAFPGLLEQQLGGSIYEVLENRYGLVPGRADERIEA 180

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA 240
           VNAT+ EA+LLG+KPK+ALLLITRVT+D  GTP EFSRDLFRGDR  LAVTA+GRGI   
Sbjct: 181 VNATTTEASLLGVKPKSALLLITRVTYDSDGTPCEFSRDLFRGDRIYLAVTAQGRGIGKG 240

Query: 241 SNSGTDNRTASVTLHRQV 258
             SG D  TASV L  Q+
Sbjct: 241 LGSGPDTNTASVKLQSQL 258


>tr|A1U9A8|A1U9A8_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium sp.]
          Length = 260

 Score =  390 bits (1002), Expect = e-107
 Identities = 202/258 (78%), Positives = 222/258 (86%)

Query: 1   MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG 60
           MP  SEELRRR+VADINAG PGAKLGSERDLAE+YGTSRSSLRQVLAALEEAG+VHRVIG
Sbjct: 1   MPTHSEELRRRIVADINAGIPGAKLGSERDLAERYGTSRSSLRQVLAALEEAGMVHRVIG 60

Query: 61  RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY 120
           R+GGIFISHGQVERNL+DVVGVPAFLANQGYVAGTR+LS            ALRL P ++
Sbjct: 61  RAGGIFISHGQVERNLADVVGVPAFLANQGYVAGTRVLSTKIAPVDDATQAALRLQPTDF 120

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           VVEIQR+RLADGSPISLE AQFPA+ FPGLLEQQLGGS+YEVLE++YGLVPGRADERIEA
Sbjct: 121 VVEIQRLRLADGSPISLELAQFPADAFPGLLEQQLGGSIYEVLENRYGLVPGRADERIEA 180

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA 240
           VNAT+ EA+LLG+KPK+ALLLITRVT+D  GTP EFSRDLFRGDR  LAVTA+GRGI   
Sbjct: 181 VNATTTEASLLGVKPKSALLLITRVTYDSDGTPCEFSRDLFRGDRIYLAVTAQGRGIGKG 240

Query: 241 SNSGTDNRTASVTLHRQV 258
             SG D  TASV L  Q+
Sbjct: 241 LGSGPDTNTASVKLQSQL 258


>tr|A3PSW4|A3PSW4_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium sp.]
          Length = 260

 Score =  387 bits (995), Expect = e-106
 Identities = 201/258 (77%), Positives = 221/258 (85%)

Query: 1   MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG 60
           M   SEELRRR+VADINAG PGAKLGSERDLAE+YGTSRSSLRQVLAALEEAG+VHRVIG
Sbjct: 1   MATHSEELRRRIVADINAGVPGAKLGSERDLAERYGTSRSSLRQVLAALEEAGMVHRVIG 60

Query: 61  RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY 120
           R+GGIFISHGQVERNL+DVVGVPAFLANQGYVAGTR+LS            ALRL P ++
Sbjct: 61  RAGGIFISHGQVERNLADVVGVPAFLANQGYVAGTRVLSTKIAPVDDATQAALRLQPTDF 120

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           VVEIQR+RLADGSPISLE AQFPA+ FPGLLEQQLGGS+YEVLE++YGLVPGRADERIEA
Sbjct: 121 VVEIQRLRLADGSPISLELAQFPADAFPGLLEQQLGGSIYEVLENRYGLVPGRADERIEA 180

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA 240
           VNAT+ EA+LLG+KPK+ALLLITRVT+D  GTP EFSRDLFRGDR  LAVTA+GRGI   
Sbjct: 181 VNATTTEASLLGVKPKSALLLITRVTYDSDGTPCEFSRDLFRGDRIYLAVTAQGRGIGKG 240

Query: 241 SNSGTDNRTASVTLHRQV 258
             SG D  TASV L  Q+
Sbjct: 241 LGSGPDTNTASVKLQSQL 258


>tr|A4T670|A4T670_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium gilvum]
          Length = 272

 Score =  352 bits (904), Expect = 2e-95
 Identities = 185/255 (72%), Positives = 211/255 (82%), Gaps = 4/255 (1%)

Query: 1   MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG 60
           +P Q+E+LRRR+VADINAG PG KLGSER+LAE+Y TSRSSLRQVLAALEEAGLV RVIG
Sbjct: 13  VPTQTEDLRRRIVADINAGKPGTKLGSERELAERYRTSRSSLRQVLAALEEAGLVDRVIG 72

Query: 61  RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY 120
           RSGGIFISH QV+R+L+DVVGVPAFLA+QGYVAGTR+LS            AL +   ++
Sbjct: 73  RSGGIFISHAQVQRSLTDVVGVPAFLASQGYVAGTRVLSTKMTAPDATTQQALGIAADDF 132

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           V+EIQR+RLADGSPISLE AQFPAE FPGLLEQQLGGSLYE+LES+YGLV  RADERIEA
Sbjct: 133 VIEIQRLRLADGSPISLELAQFPAEAFPGLLEQQLGGSLYEILESEYGLVTARADERIEA 192

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA 240
           VNAT  EA LLGIKP++ALLLITR+ +DQ  TP EFSRDLFRGDRT LAVTA+GRG+ A+
Sbjct: 193 VNATPEEANLLGIKPRSALLLITRIAYDQHDTPCEFSRDLFRGDRTRLAVTAQGRGVGAS 252

Query: 241 SNSGTDNRTASVTLH 255
            +       ASV LH
Sbjct: 253 PSVA----AASVALH 263


>tr|A1TGN9|A1TGN9_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium vanbaalenii]
          Length = 255

 Score =  351 bits (901), Expect = 4e-95
 Identities = 180/237 (75%), Positives = 205/237 (86%)

Query: 1   MPVQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIG 60
           MP Q+E+LRRR+V+DINAG PG KLGSER+LAE+Y TSRSSLRQVLAALEEAGLV RVIG
Sbjct: 1   MPTQTEDLRRRIVSDINAGVPGTKLGSERELAERYRTSRSSLRQVLAALEEAGLVDRVIG 60

Query: 61  RSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY 120
           R+GGIFISH QV+R+L+DVVGVPAFLA+QGYVAGTR+LS            AL++G  ++
Sbjct: 61  RAGGIFISHAQVQRSLTDVVGVPAFLASQGYVAGTRVLSTKICAPDSATQQALKIGADDF 120

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           V+EIQR+RLADGSPISLE AQFPA+ FPGLLEQQLGGSLYE+LESQYGLV  RADERIEA
Sbjct: 121 VIEIQRLRLADGSPISLELAQFPADAFPGLLEQQLGGSLYEILESQYGLVTARADERIEA 180

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGI 237
           VNAT  EA LLGIK K+ALLLITR+T+DQ  TP EFSRDLFRGDRT LAVTA+GRG+
Sbjct: 181 VNATPEEANLLGIKAKSALLLITRITYDQHDTPCEFSRDLFRGDRTRLAVTAQGRGV 237


>tr|C3JQB9|C3JQB9_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator, GntR family;[Rhodococcus erythropolis SK121]
          Length = 307

 Score =  303 bits (776), Expect = 1e-80
 Identities = 156/236 (66%), Positives = 191/236 (80%), Gaps = 2/236 (0%)

Query: 1   MPVQSEELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRV 58
           M  Q+EE+RRR+VA+IN+G   PG++LGSER+LAE YG SRSSLRQVLAALEEAG+V R 
Sbjct: 52  MGAQTEEVRRRIVAEINSGALPPGSRLGSERELAEHYGVSRSSLRQVLAALEEAGVVRRA 111

Query: 59  IGRSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPG 118
           IGRSGG FISH  VER+LS V+G+PA+LA+QGYVAG+RILS            AL LG  
Sbjct: 112 IGRSGGTFISHATVERDLSGVIGLPAYLASQGYVAGSRILSTQMTVPDRNARDALDLGED 171

Query: 119 EYVVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERI 178
           E+V++I+R+RLADGSPISLE  Q PA +FPGLLE+ LGGSLYE++E  YGLVPG A+E+I
Sbjct: 172 EFVIDIRRIRLADGSPISLEHVQLPAGRFPGLLERPLGGSLYELMEQAYGLVPGAAEEQI 231

Query: 179 EAVNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
           EAVNAT+ EA++LG +  AALLLITR T DQTG P+E+SRDLFR DRT ++VTA+G
Sbjct: 232 EAVNATTTEASVLGTRVDAALLLITRTTRDQTGIPFEYSRDLFRADRTRISVTARG 287


>tr|D1VMX6|D1VMX6_9ACTO Tax_Id=298654 SubName: Full=Transcriptional
           regulator, GntR family;[Frankia sp. EuI1c]
          Length = 267

 Score =  199 bits (506), Expect = 3e-49
 Identities = 112/229 (48%), Positives = 139/229 (60%), Gaps = 1/229 (0%)

Query: 10  RRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISH 69
           R LV D  A  PG +LG ERDLA   G SR +LRQ L +LE  G+V RV GR GG F++ 
Sbjct: 37  RHLVTD-GAHRPGERLGGERDLAASLGVSRETLRQALTSLEREGVVLRVRGRGGGTFVAP 95

Query: 70  GQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRL 129
            +VER+L+ +VGVP  L  QG+ AG++++S            AL L PG+ V  I R+RL
Sbjct: 96  RKVERDLTRIVGVPELLRTQGFTAGSQVVSAALEPADETVAKALELEPGDPVARIVRLRL 155

Query: 130 ADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEAT 189
           ADG PISLE A FPA +FPGL    LGGSLYE+   +Y + PG A E+IE V A   EA 
Sbjct: 156 ADGGPISLENACFPARRFPGLFNLPLGGSLYELFAEEYDIRPGEALEQIEVVLAGDEEAV 215

Query: 190 LLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIA 238
           LL     A LL + R T DQ G P+E S DLFR DR  + V + G  +A
Sbjct: 216 LLRSAVGAPLLALDRTTRDQDGQPFEHSHDLFRADRIRILVRSTGTTVA 264


>tr|C3JQD0|C3JQD0_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator, GntR family;[Rhodococcus erythropolis SK121]
          Length = 386

 Score =  191 bits (485), Expect = 7e-47
 Identities = 110/254 (43%), Positives = 159/254 (62%), Gaps = 7/254 (2%)

Query: 5   SEELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRS 62
           +E++RR++++DI++G   PG +L SER+LAE +  SRS+LR VL  L +AG+ HR+ GR+
Sbjct: 134 AEQVRRKILSDISSGILRPGDRLPSERELAEHFQVSRSTLRGVLTGLCQAGITHRLPGRA 193

Query: 63  GGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVV 122
           GG FI+  + ER+L  V G+P++LA QG  +G+++LS             L L     + 
Sbjct: 194 GGTFIAQRKFERDLDRVDGLPSYLARQGMTSGSQVLSAVLQNPEQSIRIRLGLDDQTSLA 253

Query: 123 -EIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAV 181
             I R+R ADG+P+S+EQA  PA++FPGLL++ LGGS+YE+L S+Y +    ++ER+E  
Sbjct: 254 FSILRLRFADGTPLSIEQAWLPAQRFPGLLDRPLGGSVYELLRSEYEVEVVSSEERLEVA 313

Query: 182 NATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAAS 241
           +AT  EA LL I   A L+ I R   D  G   E S DLFR DRT + V + G GI A S
Sbjct: 314 SATPEEARLLSIHTDAPLISIQRTARDAAGAIIECSNDLFRADRTQILVRSAGHGIRAES 373

Query: 242 NSGTDNRTASVTLH 255
               DN  + V L+
Sbjct: 374 ----DNSDSGVELN 383


>tr|B1MJ89|B1MJ89_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcriptional regulator, GntR family;[Mycobacterium
           abscessus]
          Length = 273

 Score =  186 bits (473), Expect = 2e-45
 Identities = 103/250 (41%), Positives = 150/250 (60%), Gaps = 4/250 (1%)

Query: 5   SEELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRS 62
           +E++RRR+++ +  GT  PG++LGSER++AE++  SR+++R  L  L  AG++ R  GR 
Sbjct: 10  AEDVRRRILSMLAQGTLHPGSRLGSEREMAERFAVSRATVRSALVPLSRAGILERQTGRG 69

Query: 63  GGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVV 122
           GG F+    V+RN++++VG+P  L   G+ + TR+L             AL +  G  V 
Sbjct: 70  GGTFVRADVVQRNVAELVGLPTRLHIGGHTSDTRVLGTSRRPATAAERAALEIAEGAEVF 129

Query: 123 EIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVN 182
           +++R+R ADG P+S++ A FPAE  P LLEQ LGGSLYE+ + +YGL    + E IE V+
Sbjct: 130 DVRRLRYADGVPLSVDTAYFPAELVPDLLEQPLGGSLYELCQVRYGLQADSSTETIEVVS 189

Query: 183 ATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAASN 242
           A   EA  L +  +  LL ITRVT +  G P+EFS DLFR DR  L  TA      A  +
Sbjct: 190 ANPREAEWLDVPHRRPLLAITRVTRNTDGRPFEFSYDLFRADRVRL--TATMTSAVAQES 247

Query: 243 SGTDNRTASV 252
            G D +   V
Sbjct: 248 RGVDGKVERV 257


>tr|A0QQJ5|A0QQJ5_MYCS2 Tax_Id=246196 SubName: Full=Putative
           transcriptional regulator;[Mycobacterium smegmatis]
          Length = 254

 Score =  182 bits (461), Expect = 5e-44
 Identities = 98/232 (42%), Positives = 146/232 (62%), Gaps = 2/232 (0%)

Query: 5   SEELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRS 62
           +E++RRR+++ +  G   PG++LG+ER++AE +  SRS+LR  L  L +AG++ R  GR+
Sbjct: 10  AEDVRRRILSMLAQGMLRPGSRLGTEREMAETFAVSRSTLRSALLPLSQAGVLERRTGRN 69

Query: 63  GGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVV 122
           GG F+    V+RN +++VG+PA L + G+ + +R+L             AL +  G  + 
Sbjct: 70  GGTFVRADVVQRNAAELVGLPARLHSGGHTSTSRVLGTDRRPATAIEAEALEVPLGTDIF 129

Query: 123 EIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVN 182
            I+R+R ADG P+S++ A F A +   LLEQ LGGSLYE+L+ +YGL P    E IE V+
Sbjct: 130 TIRRLRFADGVPLSVDLACFVAGRMNDLLEQPLGGSLYELLQVRYGLTPATTTETIEVVS 189

Query: 183 ATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
           A+  EA  L +  +  LL ITRVT D TG P+E++ DLFR DR  L  T+ G
Sbjct: 190 ASPREAQWLDVAHRKPLLAITRVTRDDTGRPFEYAYDLFRADRVRLTATSHG 241


>tr|Q7BUC5|Q7BUC5_MYCSM Tax_Id=1772 SubName: Full=Putative
           transcriptional regulator;[Mycobacterium smegmatis]
          Length = 246

 Score =  182 bits (461), Expect = 5e-44
 Identities = 98/232 (42%), Positives = 146/232 (62%), Gaps = 2/232 (0%)

Query: 5   SEELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRS 62
           +E++RRR+++ +  G   PG++LG+ER++AE +  SRS+LR  L  L +AG++ R  GR+
Sbjct: 2   AEDVRRRILSMLAQGMLRPGSRLGTEREMAETFAVSRSTLRSALLPLSQAGVLERRTGRN 61

Query: 63  GGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVV 122
           GG F+    V+RN +++VG+PA L + G+ + +R+L             AL +  G  + 
Sbjct: 62  GGTFVRADVVQRNAAELVGLPARLHSGGHTSTSRVLGTDRRPATAIEAEALEVPLGTDIF 121

Query: 123 EIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVN 182
            I+R+R ADG P+S++ A F A +   LLEQ LGGSLYE+L+ +YGL P    E IE V+
Sbjct: 122 TIRRLRFADGVPLSVDLACFVAGRMNDLLEQPLGGSLYELLQVRYGLTPATTTETIEVVS 181

Query: 183 ATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
           A+  EA  L +  +  LL ITRVT D TG P+E++ DLFR DR  L  T+ G
Sbjct: 182 ASPREAQWLDVAHRKPLLAITRVTRDDTGRPFEYAYDLFRADRVRLTATSHG 233


>tr|Q7BQA9|Q7BQA9_MYCFO Tax_Id=1766 SubName: Full=Putative
           transcriptional regulator;[Mycobacterium fortuitum]
          Length = 234

 Score =  176 bits (447), Expect = 2e-42
 Identities = 93/214 (43%), Positives = 132/214 (61%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG++LG+ER++A  +  SRS+LR  L  L +AG++ R  GR+GG F+    +ERN +++ 
Sbjct: 9   PGSRLGTEREMAADFAVSRSTLRSALLPLSQAGVLERRAGRNGGTFVRADVIERNAAELA 68

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
           G+PA L   G+ + TR+LS            AL +  G  +  I+R+R ADG+P+S++ +
Sbjct: 69  GLPARLRTGGHTSATRVLSTDRRPATAAEAHALEITDGADIFTIRRLRFADGAPLSVDLS 128

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
            F AE    LLEQ LGGSLYE++  +YGL P    E IE V+A+  EA  L I  +  LL
Sbjct: 129 CFVAEHMEDLLEQPLGGSLYELVRVRYGLSPAATTETIEVVSASPREAHWLDIAQRKPLL 188

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
            ITRVT D TG P+E++ DLFR DR  L  T+ G
Sbjct: 189 AITRVTRDGTGRPFEYAYDLFRADRVRLTATSHG 222


>tr|Q0RVU2|Q0RVU2_RHOSR Tax_Id=101510 SubName: Full=Probable
           transcriptional regulator, GntR family;[Rhodococcus sp.]
          Length = 288

 Score =  163 bits (412), Expect = 2e-38
 Identities = 89/214 (41%), Positives = 132/214 (61%), Gaps = 1/214 (0%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PGA++G+ER++A+  G SR ++R+ L  LE    + R  GR+GG+F++  ++ R+ + VV
Sbjct: 67  PGARIGAEREIAQTLGVSRWAIRRALEHLEHQEEILRTHGRNGGVFVAPKKLVRS-TPVV 125

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
           G+P +L  QG   GT +L              L L    ++  I+R+RLADG P+ LE+A
Sbjct: 126 GLPRYLKAQGVETGTTVLGTHAGPPDDESAKQLALDADTWIFHIERLRLADGLPLVLERA 185

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
            FP + FPGLLEQ LGGSLY++LE++Y +  G A E I A  A+   A LL +   A L+
Sbjct: 186 HFPCDLFPGLLEQSLGGSLYDILETRYDVDRGVAIETIAAAAASREVAGLLQVSVGAPLI 245

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
            ITR T   +G P+E+S +L+R DRTA+ V + G
Sbjct: 246 SITRTTELDSGRPFEYSHELYRSDRTAVTVRSDG 279


>tr|D1NV72|D1NV72_9BIFI Tax_Id=561180 SubName: Full=Transcriptional
           regulator, GntR family;[Bifidobacterium gallicum DSM
           20093]
          Length = 277

 Score =  154 bits (389), Expect = 1e-35
 Identities = 91/246 (36%), Positives = 134/246 (54%), Gaps = 3/246 (1%)

Query: 4   QSEELRRRLVADI--NAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGR 61
           +++EL RRL A I  N   PG K+ SER LAE+YG SR+ LR+ LA LE    + R IGR
Sbjct: 15  RTDELVRRLRAHIRDNGFMPGEKVSSERALAERYGISRAQLRRALAVLESQREIVRRIGR 74

Query: 62  SGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY- 120
            GGI ++ G++ERNL+    +P     QG++  ++ L+             LRLG G + 
Sbjct: 75  GGGIVVADGKLERNLNTAESLPEIARRQGWMLTSKPLTSALIAADQSDVRLLRLGDGRHT 134

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           V+ + R+RL DG P+S+E+   PA+ FPG  +  L    Y +    YGL     DE +E 
Sbjct: 135 VLSMTRLRLLDGEPLSVEENHLPAQLFPGFAQLDLTRPFYALFAEHYGLRVHAVDETLEC 194

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAA 240
           V A + E+ LL + P   LL I R+ +   GTP E + D++R DR  + +   G    +A
Sbjct: 195 VTAGARESKLLNVTPGTCLLKIHRLAYAPDGTPLERASDIYRADRVRVTMHHSGYLRLSA 254

Query: 241 SNSGTD 246
           + +  D
Sbjct: 255 TKTAPD 260


>tr|B6VJI0|B6VJI0_9NOCA Tax_Id=230533 SubName: Full=GntR family
           transcriptional regulator;[Rhodococcus sp. T104]
          Length = 257

 Score =  153 bits (386), Expect = 2e-35
 Identities = 85/214 (39%), Positives = 127/214 (59%), Gaps = 1/214 (0%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG ++G+ER++A+  G SR ++R+ L  LE    + R  GR+GG+F +  ++ R+ + + 
Sbjct: 36  PGDRIGAEREIAQTLGVSRWAIRRALEYLEHQEEILRTHGRNGGVFAAPKKLVRS-TPLA 94

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
           G+P +L  QG   GT +L              L L    ++  I+R+RLADG P+ LE+A
Sbjct: 95  GLPRYLQAQGVETGTTVLGTQAGPPDDESAKQLALDVDAWIFHIERLRLADGLPLVLERA 154

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
            FP + FPGLLEQ LG SLY++LE++Y +  G A E I A  A+   A LL +   A L+
Sbjct: 155 HFPCDLFPGLLEQSLGESLYDILETRYDIDRGVAIETITATAASREVAGLLQVSVGAPLI 214

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
            ITR T    G P+E+S +L+R DRTA+ V + G
Sbjct: 215 SITRTTQLDNGRPFEYSHELYRSDRTAVTVRSDG 248


>tr|B6VJK0|B6VJK0_9NOCA Tax_Id=230533 SubName: Full=GntR family
           transcriptional regulator;[Rhodococcus sp. T104]
          Length = 259

 Score =  147 bits (371), Expect = 1e-33
 Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 2/215 (0%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG ++G+ER+LA+  G SR ++R+ L  LE  G + R  GRSGGIF++  ++ R  + + 
Sbjct: 39  PGDRIGAERELAQSLGVSRWTIRRALEQLESQGQILRTHGRSGGIFVAPKKLIRT-TPLG 97

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
           G+P +L  QG  +GT +L              L L    +V  I+R+RLA G P+ LE  
Sbjct: 98  GLPVYLRAQGIDSGTTVLGTRAGPPDDEVAKQLGLESDAWVFHIERLRLAGGLPLVLETT 157

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
             P E FPGLL+Q LG SLYE+L+S+Y + P    E I A  A    A LL +   +AL+
Sbjct: 158 DLPCELFPGLLDQPLG-SLYEILDSKYDIRPEVTVETITATTADREVAGLLQVSVGSALI 216

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGR 235
            +TR     +G  +EFSR+L+R DRTA+ V + G+
Sbjct: 217 FVTRTAELGSGRTFEFSRELWRADRTAITVRSDGK 251


>tr|Q0RVS2|Q0RVS2_RHOSR Tax_Id=101510 SubName: Full=Probable
           transcriptional regulator, GntR family;[Rhodococcus sp.]
          Length = 259

 Score =  144 bits (363), Expect = 1e-32
 Identities = 84/215 (39%), Positives = 124/215 (57%), Gaps = 2/215 (0%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG ++G+ER+LA+  G SR ++R+ L  LE  G + R  GRSGGIF++  ++ R  + + 
Sbjct: 39  PGDRIGAERELAQSLGVSRWTIRRALEQLESQGRILRTHGRSGGIFVAPKKLIRT-TPLG 97

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
           G+P +L  QG  +GT +L              L L    +V  I+R+R A G P+ LE  
Sbjct: 98  GLPVYLRAQGIDSGTTVLGTRAGPPDDEIAKQLGLESDAWVFHIERLRFAGGLPLVLETT 157

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
             P + FPGLL+Q LG SLYE+L+S+Y + P    E I A  A    A LL +   +AL+
Sbjct: 158 DLPCDLFPGLLDQPLG-SLYEILDSKYDIRPEVTVETITATTAEREVAGLLQVAVGSALI 216

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGR 235
            +TR     +G  +EFSR+L+R DRTA+ V + G+
Sbjct: 217 FVTRTAELGSGRTFEFSRELWRADRTAITVRSDGK 251


>tr|A1T7F2|A1T7F2_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium vanbaalenii]
          Length = 263

 Score =  140 bits (353), Expect = 2e-31
 Identities = 83/213 (38%), Positives = 116/213 (54%), Gaps = 1/213 (0%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG KL  E ++A   G SR +LRQ L+A+E  GL+ R  GR GG F++  + E + + + 
Sbjct: 44  PGDKLPPEVEIATSLGVSRMTLRQALSAVEAKGLIDRRRGRFGGNFVAAPRFEFDHASLP 103

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
           G    +      AG ++L             AL L   + V  I R R A+G PI LE+A
Sbjct: 104 GFTEQMRRFEVEAGAQVLMATTGRPDAEVSRALGLRRTDQVHRILRARTANGEPIVLEEA 163

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
             PA  FPG+L + L  SLY ++   YG  P  ADERIEA +AT  +A +LG++P   LL
Sbjct: 164 YLPAAVFPGMLSKNLQASLYALMRG-YGHAPCAADERIEATSATPEQARVLGVEPSCPLL 222

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAK 233
           L+ R +F   G   EFSRD  R DRT + + ++
Sbjct: 223 LVVRTSFADNGVAVEFSRDYHRSDRTTIRIQSR 255


>tr|B1S6A1|B1S6A1_9BIFI Tax_Id=473819 SubName: Full=Putative
           uncharacterized protein;[Bifidobacterium dentium ATCC
           27678]
          Length = 258

 Score =  137 bits (346), Expect = 1e-30
 Identities = 81/216 (37%), Positives = 118/216 (54%), Gaps = 3/216 (1%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG +LGSER LA+  G SRS LR  LA LE +  V R IGR+GGI +S G++ERN++ V 
Sbjct: 32  PGERLGSERALAQSLGISRSDLRMALAVLEASHEVIRKIGRAGGIVVSDGRLERNINTVE 91

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY--VVEIQRVRLADGSPISLE 138
            +P  +  QG    +++L              L+L PGE+  V +I R+R  +  P+SLE
Sbjct: 92  SLPTIVRRQGMRVSSKVLQAVIAPASPSDIRLLKL-PGEHPMVYDITRLRYIEDQPLSLE 150

Query: 139 QAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAA 198
           ++  PA  FP  L + L    Y + E  Y + P   DE +E+V   + E  LL I+P+  
Sbjct: 151 RSHLPAYLFPMFLTRDLTTPFYTMFERDYDVRPYSVDETLESVVGDAQENELLEIEPETP 210

Query: 199 LLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
           L+ I R+ F   GTP+E + D++  DR    +   G
Sbjct: 211 LMRIHRIAFTAEGTPFERAIDVYVADRMRFTMHHSG 246


>tr|C0BQC1|C0BQC1_9BIFI Tax_Id=547043 SubName: Full=Putative
           uncharacterized protein;[Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 260

 Score =  137 bits (345), Expect = 1e-30
 Identities = 85/231 (36%), Positives = 118/231 (51%), Gaps = 5/231 (2%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG KLGSER LA+  G SRS LR  L  LE    + R IGR+GGI IS G++ERN++ V 
Sbjct: 32  PGEKLGSERALADSLGVSRSDLRNALTVLESDHEIIRKIGRAGGIVISDGRLERNINTVE 91

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY--VVEIQRVRLADGSPISLE 138
            +P     QG    +++L              LRL PGE+  + +I R+R  +  P+SLE
Sbjct: 92  SLPTIARRQGMRVSSKVLQAVIAPASVSDVRLLRL-PGEHPMIYDITRLRYIENRPLSLE 150

Query: 139 QAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAA 198
           ++  PA  FP  L + L    Y + E  YG+ P   DE +E+V     E  LL IK    
Sbjct: 151 RSHLPAYLFPLFLTRDLTTPFYTMFERDYGVYPCNVDETLESVVGDEQENELLQIKAGTP 210

Query: 199 LLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRGIAAASNSGTDNRT 249
           L+ I R+ +   G P+E + D++  DR  +  T    G    S + T N T
Sbjct: 211 LMRIHRIAYASDGCPFERATDVYIADR--MRFTMHHSGYVRLSATSTQNMT 259


>tr|D2Q8N5|D2Q8N5_BIFDB Tax_Id=401473 SubName: Full=Putative
           uncharacterized protein;[Bifidobacterium dentium]
          Length = 258

 Score =  137 bits (344), Expect = 2e-30
 Identities = 81/216 (37%), Positives = 117/216 (54%), Gaps = 3/216 (1%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG +LGSER LA+  G SRS LR  LA LE +  V R IGR+GGI +S G++ERN++ V 
Sbjct: 32  PGERLGSERALAQSLGISRSDLRMALAVLEASHEVIRKIGRAGGIVVSDGRLERNINTVE 91

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEY--VVEIQRVRLADGSPISLE 138
            +P     QG    +++L              L+L PGE+  V +I R+R  +  P+SLE
Sbjct: 92  SLPTIARRQGMRVSSKVLQAVIAPASPSDIRLLKL-PGEHPMVYDITRLRYIEDQPLSLE 150

Query: 139 QAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAA 198
           ++  PA  FP  L + L    Y + E  Y + P   DE +E+V   + E  LL I+P+  
Sbjct: 151 RSHLPAYLFPMFLTRDLTTPFYTMFERDYDVRPYSVDETLESVVGDAQENELLEIEPETP 210

Query: 199 LLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
           L+ I R+ F   GTP+E + D++  DR    +   G
Sbjct: 211 LMRIHRIAFTAEGTPFERAIDVYVADRMRFTMHHSG 246


>tr|C7MQ08|C7MQ08_SACVD Tax_Id=471857 SubName: Full=Transcriptional
           regulator, GntR family;[Saccharomonospora viridis]
          Length = 244

 Score =  127 bits (320), Expect = 1e-27
 Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 4/225 (1%)

Query: 8   LRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFI 67
           L++ L+  + +  PGA + +ER LA ++G SR+++RQ LA L   G +HRV G+  G F 
Sbjct: 19  LKQHLLDLLESLPPGAAIPTERSLATEFGVSRTTVRQALADLTAEGRLHRVQGK--GTFA 76

Query: 68  SHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRV 127
           +  ++ + L  +      +  QG    +R+L              LR+  G  V+ +QR+
Sbjct: 77  AEPKIAQRLQ-LSSYTEDIRAQGREPSSRLLEIDEIPAEGDLPKLLRIRTGAKVLRVQRL 135

Query: 128 RLADGSPISLEQAQFPAEKFPGLLEQ-QLGGSLYEVLESQYGLVPGRADERIEAVNATSN 186
           RLADG P++LE    P+ +F GL +  + GGSLYE L+ +YG+   RA+E IE   A   
Sbjct: 136 RLADGEPMALETTHLPSARFRGLRKHIESGGSLYEALQERYGVELERAEETIETSLAGPQ 195

Query: 187 EATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVT 231
           EA LLG      +LL+ R TF   G P E+   ++RGDR     T
Sbjct: 196 EAELLGADVGMPVLLLERQTFAVDGKPVEYVHSIYRGDRYKFVTT 240


>tr|D1ACH1|D1ACH1_THECD Tax_Id=471852 SubName: Full=Transcriptional
           regulator, GntR family;[Thermomonospora curvata]
          Length = 252

 Score =  125 bits (315), Expect = 4e-27
 Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 4/220 (1%)

Query: 7   ELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIF 66
           +L+  LV    +  PG+ L  ER LAE+Y TSR+++RQ LA L   G + R+ G+  G F
Sbjct: 25  KLKELLVELTQSLPPGSPLPPERTLAERYETSRTTVRQALAELVVEGRLQRIQGK--GTF 82

Query: 67  ISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQR 126
           ++  +V + L  +      + + G    T+IL              L + PG  V+ + R
Sbjct: 83  VAKPKVAQELQ-LTSYTEDMRHHGLNPETKILEIGYVSADERLARLLGIRPGGRVLRLHR 141

Query: 127 VRLADGSPISLEQAQFPAEKFPGLL-EQQLGGSLYEVLESQYGLVPGRADERIEAVNATS 185
           +RLADG P+S++ +  PA +FPGL  E     SLYE L + Y +    A+E IE V AT 
Sbjct: 142 LRLADGEPMSIDTSHLPARRFPGLRRELPRHRSLYETLSTAYDVHLAEAEETIETVLATP 201

Query: 186 NEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
           ++A LLG+     +LL++R  FD  G P E+++ L+RGDR
Sbjct: 202 HDAQLLGVDVGLPMLLLSRHAFDTHGEPVEWAQSLYRGDR 241


>tr|D1BUC7|D1BUC7_XYLCX Tax_Id=446471 SubName: Full=Transcriptional
           regulator, GntR family;[Xylanimonas cellulosilytica]
          Length = 244

 Score =  124 bits (310), Expect = 1e-26
 Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 6/230 (2%)

Query: 2   PVQSE--ELRRRLVADINAGTP-GAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRV 58
           PV+++  +++  L+ D   G P G  L  ER LA+ +G +R ++R+ +  LE  GLV+R+
Sbjct: 11  PVRAKYLQIKDSLLQDHVEGKPAGTALPPERVLAQDFGVTRVTVRRAIDELESDGLVYRI 70

Query: 59  IGRSGGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPG 118
            G  GG +     + ++L  +      +  +G    + +L             +L L P 
Sbjct: 71  QG--GGTYTVGPSIAKSLR-LTSFSEDVRARGRTPSSEVLEVSQGPAGDEVGRSLHLSPM 127

Query: 119 EYVVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERI 178
           + VV I+R+R+ADG P+ LE    PA   PG+ E+ L GSLY +L  +YGL P RA++ I
Sbjct: 128 DTVVTIRRLRMADGEPMCLEVCALPARLAPGIEEEDLTGSLYAILSGRYGLEPARAEQVI 187

Query: 179 EAVNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTAL 228
           EA      EA +L + P +A L  TR ++D  G P EF+   +R DR +L
Sbjct: 188 EATVLDEREAGMLAVPPFSAALRATRTSYDTRGGPIEFAVTTYRADRYSL 237


>tr|Q2B734|Q2B734_9BACI Tax_Id=313627 SubName: Full=Transcriptional
           regulator (GntR family) protein;[Bacillus sp. NRRL
           B-14911]
          Length = 241

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 2/199 (1%)

Query: 27  SERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVVGVPAFL 86
           SER+ AE++  SR ++RQ ++ L   GL++R  GR  G F++  +VE+ L  +      +
Sbjct: 35  SEREYAEQFQISRMTVRQAISNLVREGLLYREKGR--GTFVNKQKVEQELQGLTSFTEDM 92

Query: 87  ANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQAQFPAEK 146
             +G    +R LS             L++  G  V EI R+RLADG P++LE    P   
Sbjct: 93  QMRGMKPSSRTLSFQTLPAPGGIASRLQIAEGSPVYEISRIRLADGLPMALETNYIPEAL 152

Query: 147 FPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALLLITRVT 206
            PGL E+ LG SLYE  E++  L    A++ IEA  A + EA LL I+  + +LLI R T
Sbjct: 153 MPGLTEEDLGHSLYEYAENRLSLSIAEAEQEIEAAGAKNREAGLLSIQEGSPILLILRTT 212

Query: 207 FDQTGTPYEFSRDLFRGDR 225
               GTP+EF +  +R DR
Sbjct: 213 RLSDGTPFEFVQSAYRADR 231


>tr|C5BX21|C5BX21_BEUC1 Tax_Id=471853 SubName: Full=Transcriptional
           regulator, GntR family;[Beutenbergia cavernae]
          Length = 238

 Score =  120 bits (301), Expect = 2e-25
 Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 4/228 (1%)

Query: 4   QSEELRRRLVADINAGT-PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRS 62
           ++E +RR L   I+    P  +L  ER LA +   SR ++RQ L +LE    V+RV G  
Sbjct: 10  KAERVRRHLEQLIDTSLQPHDRLPPERLLAAQLDVSRMTVRQALDSLEAEKRVYRVQG-- 67

Query: 63  GGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVV 122
            G +++   +E+ +  +      +  +G   G R+++             L L P + VV
Sbjct: 68  SGNYVAERVIEKTIR-LTSFTEDMRERGMTPGARLVTSGTEHAGPEVGARLGLSPADAVV 126

Query: 123 EIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVN 182
            I R+RLADG P+ LE      ++ PGLLE+ L GSLY++L ++Y +    A +RI A  
Sbjct: 127 RINRIRLADGEPVCLEAVHISEKRVPGLLEEDLSGSLYDLLTTRYDIAVSTAQQRIGATV 186

Query: 183 ATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAV 230
               +A LL + P +  L+I R+T DQ   P E++R L+R DR +  +
Sbjct: 187 VDQADAKLLEVAPFSPALVIERLTLDQHRRPLEYTRSLYRADRYSFLI 234


>tr|C1AW73|C1AW73_RHOOB Tax_Id=632772 SubName: Full=Putative GntR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 255

 Score =  119 bits (298), Expect = 4e-25
 Identities = 73/214 (34%), Positives = 112/214 (52%), Gaps = 4/214 (1%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG  + SER L + YG SR ++R+ +  L   G + RV G+  G F++H  V+  L  + 
Sbjct: 39  PGDLMTSERKLMQDYGVSRITVREAIGQLVNEGHLVRVRGK--GTFVAHRPVQSKLH-LA 95

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
                +  QG+   T +L             ALR+ PG     ++R+RLADG P+S++  
Sbjct: 96  SFTEEMRAQGHKPTTVVLQCEEDAAPEATAKALRIAPGTSAYHVKRLRLADGEPVSVDDG 155

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
            + A   PGLL+  L GS+Y     +YG+   RA++ + A  A+ + ATLLGIK  A ++
Sbjct: 156 WYNAALLPGLLDLDLTGSIYRATADRYGMPIDRAEQTVSADGASQDIATLLGIKKGAPVM 215

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
              RV+F    TP E +R  +R DR  L +  +G
Sbjct: 216 YFDRVSFSGP-TPVEHARSWYRSDRYQLQMEVQG 248


>tr|A4FP40|A4FP40_SACEN Tax_Id=405948 SubName: Full=Putative
           GntR-family transcriptional regulator;[Saccharopolyspora
           erythraea]
          Length = 254

 Score =  119 bits (298), Expect = 4e-25
 Identities = 77/205 (37%), Positives = 107/205 (52%), Gaps = 4/205 (1%)

Query: 22  GAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVVG 81
           GA L +ER+LAE+YG SR +LRQ +  L   G   R++ R G   +           +V 
Sbjct: 44  GACLPAERELAERYGVSRVTLRQAVGELVLEG---RLLRRQGSRTVVAPPKLLQPLALVS 100

Query: 82  VPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQAQ 141
               +  QG   G  ++S             L + PG  V+ ++RV LA G  + LE + 
Sbjct: 101 YTEGIRTQGLEPGRTVISAEVLSADPQLAADLGVEPGGEVIYLERVLLAGGERVGLESSY 160

Query: 142 FPAEKFPGLLEQ-QLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
            P  +FP LLE     GSLY  L+ + G+V G A+ERIE V AT  EA L+G  P   ++
Sbjct: 161 LPRHRFPRLLEDFDADGSLYAFLQRELGVVFGEAEERIETVLATPREALLIGTNPATPMI 220

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDR 225
           L+ RV+++  GTP E  R LFRGDR
Sbjct: 221 LLHRVSWEPDGTPIERVRSLFRGDR 245


>tr|C7MHG8|C7MHG8_BRAFD Tax_Id=446465 SubName: Full=Transcriptional
           regulator;[Brachybacterium faecium]
          Length = 259

 Score =  119 bits (297), Expect = 5e-25
 Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 17/261 (6%)

Query: 5   SEELRRRLVADINAGT-PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSG 63
           ++E+R  + A   AG+ P + L SER LAE++G +R+++R  LA L E   +    G  G
Sbjct: 7   AQEVRDAIEARYIAGSEPSSVLPSERRLAEEFGVARATVRSALAMLREQQQIRS--GGGG 64

Query: 64  GIFISHGQVERNLSDVVGVPAFLAN---QGYVAGTRILSXXXXXXXXXXXXALRLGPGEY 120
              +    V+  L+    + +F  +   +G+   +R+L              L +  G  
Sbjct: 65  PAMV----VDPRLTKAPRLSSFTQDALARGWQPSSRVLEVEEERADVTVARDLGISSGAE 120

Query: 121 VVEIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEA 180
           VV IQR+RLAD SP+++E+     + FPGL  + L GSLYE+LE++YG+   R D RI A
Sbjct: 121 VVRIQRLRLADHSPMAIEEVWLSEDLFPGLASEDLSGSLYELLETRYGVAVYRHDRRISA 180

Query: 181 VNATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR---TALAVTAKGRGI 237
           ++  +  A LL I+  AA L  T++  D+ G   E  R ++RGDR   T +   A  +G 
Sbjct: 181 ISVDAVHAELLDIEVGAAALFATQIGVDRRGRRLELGRSIYRGDRFDFTTVTFAAGRQGP 240

Query: 238 AAASNSGTDNRTASVTLHRQV 258
           A     G  +R  +   +R+V
Sbjct: 241 A----PGRSHRPVNSRTNREV 257


>tr|A4F723|A4F723_SACEN Tax_Id=405948 SubName: Full=Putative
           GntR-family transcriptional regulator;[Saccharopolyspora
           erythraea]
          Length = 251

 Score =  118 bits (296), Expect = 6e-25
 Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 4/219 (1%)

Query: 8   LRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFI 67
           L++ L+  + +  PG+ + +ER LA ++  SR+++RQ LA L   G + RV G+  G F 
Sbjct: 25  LKQHLLDMLRSLPPGSPIPTERALAAEFDVSRTTVRQALAELTVEGRLLRVQGK--GTFA 82

Query: 68  SHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRV 127
           +  +V + L  + G    +  QG    +R+L              L   P   V+ ++R+
Sbjct: 83  AKPKVAQRLQ-LTGYTEDMLAQGRQPTSRLLEVIEEPADQELASLLGTRPSATVLRLRRL 141

Query: 128 RLADGSPISLEQAQFPAEKFPGLLEQ-QLGGSLYEVLESQYGLVPGRADERIEAVNATSN 186
           RLADG P+++E    P  +F GL  + + GGSLY+VL   +G+  G A+E IE   A+  
Sbjct: 142 RLADGEPMAIETTHLPLSRFRGLTGRLESGGSLYQVLRESFGVEMGYAEETIETALASPE 201

Query: 187 EATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
           EA LLG      +LL++R +FD  G P E+ R ++RGDR
Sbjct: 202 EAELLGADVGLPMLLLSRHSFDTEGRPVEWVRSIYRGDR 240


>tr|D3F0V8|D3F0V8_CONWI Tax_Id=469383 SubName: Full=Transcriptional
           regulator, GntR family;[Conexibacter woesei]
          Length = 255

 Score =  118 bits (295), Expect = 8e-25
 Identities = 83/234 (35%), Positives = 117/234 (50%), Gaps = 4/234 (1%)

Query: 4   QSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSG 63
           + E+LR  L   ++   PGA L SER LAE++G +R ++R+ L  L   GL +RV     
Sbjct: 24  KGEQLRHALEQLMSGLGPGALLPSERILAERFGVARMTVRRELDRLTADGLAYRV--ERQ 81

Query: 64  GIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVE 123
           G F++ G++ ++   +      +  +G   G R L+            AL   PG  VV 
Sbjct: 82  GTFVAEGRIVQS-DALSSFSEDIVARGMTPGGRTLAQEVVPADDAVAAALERPPGVPVVR 140

Query: 124 IQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGG-SLYEVLESQYGLVPGRADERIEAVN 182
           I RVR ADG PI+ E    P++ FP L    L G SLY +L  +YG+  G AD+R  AV 
Sbjct: 141 IHRVRTADGEPIAEEWIHLPSDDFPLLERAPLDGRSLYALLRQRYGVTFGEADQRASAVA 200

Query: 183 ATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKGRG 236
            T+ EA LL  +      L  R T    G   E +R L+RGDR  +A+    RG
Sbjct: 201 MTAEEAALLDAEAGQPAFLFRRTTRRHNGRVIESARSLYRGDRYEIAMHQLPRG 254


>tr|A8VQ24|A8VQ24_9BACI Tax_Id=439292 SubName: Full=Transcriptional
           regulators-like protein;[Bacillus selenitireducens
           MLS10]
          Length = 239

 Score =  118 bits (295), Expect = 8e-25
 Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 5/221 (2%)

Query: 7   ELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGG 64
           +L+ +L   I  GT  PG  L SERDL+E YG SR ++RQ +  L   GL+ R  GR  G
Sbjct: 13  QLQEQLRKQIEDGTLQPGDPLPSERDLSETYGISRMTIRQAMTNLVNEGLLTRSKGR--G 70

Query: 65  IFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEI 124
            F++  ++E+ L  + G    +  +G   G+ ++S             L L  G  V EI
Sbjct: 71  TFVAEEKIEQPLMKLTGFSEDMKQRGIKPGSTLISFDTVAAPANVAKHLELDAGTPVYEI 130

Query: 125 QRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNAT 184
            R+R  DG+P++ E +    +    + EQ L GSLYE +E+Q G    +A + IE   A+
Sbjct: 131 SRLRTGDGAPMAFETSYLRQDGIT-IREQDLEGSLYEAIEAQSGRKIDKARQTIEPSFAS 189

Query: 185 SNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
             EA +L I+  + +LL+ R T    GT +EF + ++RGDR
Sbjct: 190 DEEARMLTIEAGSPVLLLERTTRFHNGTVFEFVKSVYRGDR 230


>tr|Q8FN27|Q8FN27_COREF Tax_Id=152794 SubName: Full=Putative
           transcription regulator;[Corynebacterium efficiens]
          Length = 263

 Score =  117 bits (293), Expect = 1e-24
 Identities = 74/217 (34%), Positives = 111/217 (51%)

Query: 15  DINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVER 74
           + NA +PG +L +ERDLAE++G +R ++RQ L  L+  G++ R  GRSGG F+   +   
Sbjct: 42  EANALSPGDRLPAERDLAEEFGVARMTVRQALDQLQMDGVIGRKRGRSGGSFVLGNRPVV 101

Query: 75  NLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSP 134
            L+   G+   L  +G+   T +L+             LR+   E VV I RV  A  +P
Sbjct: 102 ELTHRRGILPQLDARGHAVVTEVLTVEEFNAPATLAAKLRVPFREPVVRIVRVHHAADTP 161

Query: 135 ISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIK 194
           + +  + FPA   PG+    L GSL E+L+  + L P R +E +    AT  E   LG+ 
Sbjct: 162 VLISDSHFPAHLVPGIAHMDLNGSLAELLDRHWSLSPARKEETLAPGVATPFEQEHLGVS 221

Query: 195 PKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVT 231
           P   LL I R+T        E+S D+ R D  A+ V+
Sbjct: 222 PAMPLLRIQRITELHNHRVLEYSEDVLRSDAAAVRVS 258


>tr|Q0SGH0|Q0SGH0_RHOSR Tax_Id=101510 SubName: Full=Transcriptional
           regulator, GntR family protein;[Rhodococcus sp.]
          Length = 247

 Score =  117 bits (293), Expect = 1e-24
 Identities = 73/214 (34%), Positives = 110/214 (51%), Gaps = 4/214 (1%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           PG  + SER L + YG SR ++R+ +  L   G + RV G+  G F++H  V+  L  + 
Sbjct: 31  PGDLMTSERKLMQDYGVSRITVREAIGQLVNEGHLVRVRGK--GTFVAHRPVQSKLH-LA 87

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
                +  QG+   T +L             ALR+ P      ++R+RLADG P+S++  
Sbjct: 88  SFTEEMRAQGHKPTTVVLQSEEDAAPEATAKALRIAPDTSAYHVKRLRLADGEPVSVDDG 147

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
            F A   PGLL+  L GS+Y     +YG+   RA++ + A  A+   ATLLGIK  A ++
Sbjct: 148 WFNAALLPGLLDLDLTGSIYRATADKYGMPIDRAEQTVSADGASQEIATLLGIKKGAPVM 207

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDRTALAVTAKG 234
              RV+F    TP E +R  +R DR  L +  +G
Sbjct: 208 YFDRVSFSGP-TPVEHTRSWYRSDRYQLQMEVQG 240


>tr|C8NQT3|C8NQT3_COREF Tax_Id=196164 SubName: Full=Transcription
           regulator;[Corynebacterium efficiens YS-314]
          Length = 242

 Score =  117 bits (293), Expect = 1e-24
 Identities = 74/217 (34%), Positives = 111/217 (51%)

Query: 15  DINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVER 74
           + NA +PG +L +ERDLAE++G +R ++RQ L  L+  G++ R  GRSGG F+   +   
Sbjct: 21  EANALSPGDRLPAERDLAEEFGVARMTVRQALDQLQMDGVIGRKRGRSGGSFVLGNRPVV 80

Query: 75  NLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSP 134
            L+   G+   L  +G+   T +L+             LR+   E VV I RV  A  +P
Sbjct: 81  ELTHRRGILPQLDARGHAVVTEVLTVEEFNAPATLAAKLRVPFREPVVRIVRVHHAADTP 140

Query: 135 ISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIK 194
           + +  + FPA   PG+    L GSL E+L+  + L P R +E +    AT  E   LG+ 
Sbjct: 141 VLISDSHFPAHLVPGIAHMDLNGSLAELLDRHWSLSPARKEETLAPGVATPFEQEHLGVS 200

Query: 195 PKAALLLITRVTFDQTGTPYEFSRDLFRGDRTALAVT 231
           P   LL I R+T        E+S D+ R D  A+ V+
Sbjct: 201 PAMPLLRIQRITELHNHRVLEYSEDVLRSDAAAVRVS 237


>tr|D1CI93|D1CI93_THET1 Tax_Id=525904 SubName: Full=Phophonate C-P
           lyase system transcriptional regulator PhnF, GntR
           family;[Thermobaculum terrenum]
          Length = 243

 Score =  116 bits (291), Expect = 2e-24
 Identities = 74/208 (35%), Positives = 110/208 (52%), Gaps = 9/208 (4%)

Query: 22  GAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVVG 81
           G +L SER+L E+YG SR ++RQ +  L   GL++R  GR  G F+   ++ + L  +  
Sbjct: 29  GMRLPSERELCEQYGVSRMTVRQSITDLVHEGLLYREQGR--GTFVRRARINQQLDRLTS 86

Query: 82  VPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQAQ 141
               + N+G     R+LS             L+L PG+ V  + R+R +DG P++LE   
Sbjct: 87  FTEDMLNRGQTPNARVLSAGMCEADSMVAERLQLPPGQEVFRLYRLRTSDGEPLALELTH 146

Query: 142 FPAEKFPG---LLEQQLG-GSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKA 197
                FPG   LLE+ L   SLY +LE++YG+    A + +EA  A   EA LL I P +
Sbjct: 147 I---YFPGCERLLEEDLEHNSLYVLLETKYGIALVEALQEVEAGLAGKEEANLLRISPGS 203

Query: 198 ALLLITRVTFDQTGTPYEFSRDLFRGDR 225
            +LL  R T+   G P E++   +RGDR
Sbjct: 204 PVLLTRRTTYTDHGHPVEYAVSTYRGDR 231


>tr|C6WAF5|C6WAF5_ACTMD Tax_Id=446462 SubName: Full=Transcriptional
           regulator, GntR family;[Actinosynnema mirum]
          Length = 257

 Score =  116 bits (290), Expect = 3e-24
 Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 6/214 (2%)

Query: 22  GAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSG-GIFISHGQVERNLSDVV 80
           GA L SER+LA ++  SR +LRQ +A L   G   R++ R G G +++  ++ + LS +V
Sbjct: 46  GAALPSERELACRFSVSRVTLRQAVAELVLEG---RLLRRHGSGTYVAPPKLVQPLS-LV 101

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
                +  QG      +++             L +  G+ V+ ++RV LADG+ + LE  
Sbjct: 102 SYADGMRAQGIRPDRGVVTVERLPADEVLAEDLLVPHGDPVLHLERVMLADGARVGLEST 161

Query: 141 QFPAEKFPGLLEQ-QLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAAL 199
             P  +FPGLL+     GSL+  L  ++G+  G A+ER+E V A   EA L+G  P   +
Sbjct: 162 YLPLSRFPGLLDALDPAGSLHACLRERFGVEFGGAEERVETVLAAPREALLIGTNPALPM 221

Query: 200 LLITRVTFDQTGTPYEFSRDLFRGDRTALAVTAK 233
           LL+ RV  D++GTP E SR L+RGDR +LA   +
Sbjct: 222 LLLHRVAHDRSGTPVERSRSLYRGDRYSLAARVR 255


>tr|C5RAN3|C5RAN3_WEIPA Tax_Id=585506 SubName: Full=GntR family
           transcriptional regulator;[Weissella paramesenteroides
           ATCC 33313]
          Length = 234

 Score =  116 bits (290), Expect = 3e-24
 Identities = 67/220 (30%), Positives = 112/220 (50%), Gaps = 4/220 (1%)

Query: 6   EELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGI 65
           +E+R  +  D     PG ++ +ER+LAE++G SR +LRQ +  L + G++ R +G   G 
Sbjct: 11  DEIREAI--DAGRWVPGDRIPAERELAEQFGVSRMTLRQAIMLLVDEGVLERRVG--SGT 66

Query: 66  FISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQ 125
           F+S  +V+ +L+ +      +A+ G  A ++ +S             L+L P   V+ ++
Sbjct: 67  FVSEQKVQEHLNGITSFTDLMADAGKKATSKTISFHAGRATNSEQEQLQLAPDARVLRME 126

Query: 126 RVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATS 185
           RVR  DG PI+ E A  P     GL    L  SLY  L  + GL  GRA + + A     
Sbjct: 127 RVRYGDGEPIAFEVAAIPESLIEGLSRSALTDSLYRTLAEERGLKIGRAQQTVTAAAVKE 186

Query: 186 NEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
             +  L IK    +L++ ++T+D  G P+E+ +  + G R
Sbjct: 187 RVSEYLAIKRGDPVLVLRQITYDAKGVPFEYVQTQYVGSR 226


>tr|D3PSJ2|D3PSJ2_MEIRD Tax_Id=504728 SubName: Full=Transcriptional
           regulator, GntR family;[Meiothermus ruber]
          Length = 240

 Score =  115 bits (289), Expect = 4e-24
 Identities = 82/223 (36%), Positives = 121/223 (54%), Gaps = 7/223 (3%)

Query: 3   VQSEELRRRLVADINAGTPGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRS 62
           +Q E L R  +A  N    G  +  ER+LAE++G SR +LR+ L  LE  GLV R  G  
Sbjct: 15  LQLEALLREALAS-NTWKAGEAMPPERELAERFGVSRLTLRKALERLEAQGLVQRRQG-- 71

Query: 63  GGIFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVV 122
            G +++  ++E+ LS +      +  +G    TR L             AL L PGE V 
Sbjct: 72  SGTYVAP-RLEQPLSALTSFSEDMRARGLEPSTRWLKRGLFTASPEEVLALSLSPGEKVA 130

Query: 123 EIQRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVN 182
            ++RVR A G P+++E+A  PA   P    +Q+  SLY  LES+ GL P RA +R+ +V 
Sbjct: 131 RLERVRSAQGEPMAVERAALPAHLLPH--PEQVKESLYAYLESK-GLRPVRALQRLRSVA 187

Query: 183 ATSNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
           A+  EA LLG++    +L I R+++   G+  EF+R  +RGDR
Sbjct: 188 ASRQEAELLGLRAGEPVLYIERLSYLADGSVLEFTRSHYRGDR 230


>tr|C7TKE8|C7TKE8_LACRL Tax_Id=568704 (def)SubName:
           Full=Transcriptional regulator, GntR
           family;[Lactobacillus rhamnosus]
          Length = 233

 Score =  115 bits (289), Expect = 4e-24
 Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 7   ELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGG 64
           ++   + ADI AG    G ++ SERDLA  +  SR +LRQ +  L + G++ R +G   G
Sbjct: 8   QIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVG--SG 65

Query: 65  IFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEI 124
            ++++ +V+  +S V      +  QG V  ++ +S             L+L P E V+ +
Sbjct: 66  TYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLAPAEQVLRM 125

Query: 125 QRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNAT 184
           +R+R AD  PIS E A  P +   G  ++++  S Y  LE + G V G A + + A+ A+
Sbjct: 126 ERIRYADKVPISFETAAVPYDLVKGFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLAS 185

Query: 185 SNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
              +  L IK   A+L + +V+F + GTP+E+ R  + G+R
Sbjct: 186 ERISEYLAIKRGDAILRLRQVSFLKDGTPFEYVRTQYVGER 226


>tr|C7TDR3|C7TDR3_LACRG Tax_Id=568703 (def)SubName:
           Full=Transcriptional regulator; SubName:
           Full=Transcriptional regulator, GntR
           family;[Lactobacillus rhamnosus]
          Length = 233

 Score =  115 bits (289), Expect = 4e-24
 Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 7   ELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGG 64
           ++   + ADI AG    G ++ SERDLA  +  SR +LRQ +  L + G++ R +G   G
Sbjct: 8   QIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVG--SG 65

Query: 65  IFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEI 124
            ++++ +V+  +S V      +  QG V  ++ +S             L+L P E V+ +
Sbjct: 66  TYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLAPAEQVLRM 125

Query: 125 QRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNAT 184
           +R+R AD  PIS E A  P +   G  ++++  S Y  LE + G V G A + + A+ A+
Sbjct: 126 ERIRYADKVPISFETAAVPYDLVKGFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLAS 185

Query: 185 SNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
              +  L IK   A+L + +V+F + GTP+E+ R  + G+R
Sbjct: 186 ERISEYLAIKRGDAILRLRQVSFLKDGTPFEYVRTQYVGER 226


>tr|C2JYC8|C2JYC8_LACRH Tax_Id=525361 SubName: Full=GntR family
           transcriptional regulator;[Lactobacillus rhamnosus
           LMS2-1]
          Length = 235

 Score =  115 bits (289), Expect = 4e-24
 Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 7   ELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGG 64
           ++   + ADI AG    G ++ SERDLA  +  SR +LRQ +  L + G++ R +G   G
Sbjct: 10  QIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVG--SG 67

Query: 65  IFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEI 124
            ++++ +V+  +S V      +  QG V  ++ +S             L+L P E V+ +
Sbjct: 68  TYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLAPAEQVLRM 127

Query: 125 QRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNAT 184
           +R+R AD  PIS E A  P +   G  ++++  S Y  LE + G V G A + + A+ A+
Sbjct: 128 ERIRYADKVPISFETAAVPYDLVKGFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLAS 187

Query: 185 SNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
              +  L IK   A+L + +V+F + GTP+E+ R  + G+R
Sbjct: 188 ERISEYLAIKRGDAILRLRQVSFLKDGTPFEYVRTQYVGER 228


>tr|B5QMB9|B5QMB9_LACRH Tax_Id=486408 SubName: Full=Transcriptional
           regulator;[Lactobacillus rhamnosus HN001]
          Length = 233

 Score =  115 bits (289), Expect = 4e-24
 Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 7   ELRRRLVADINAGT--PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGG 64
           ++   + ADI AG    G ++ SERDLA  +  SR +LRQ +  L + G++ R +G   G
Sbjct: 8   QIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVG--SG 65

Query: 65  IFISHGQVERNLSDVVGVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEI 124
            ++++ +V+  +S V      +  QG V  ++ +S             L+L P E V+ +
Sbjct: 66  TYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLAPAEQVLRM 125

Query: 125 QRVRLADGSPISLEQAQFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNAT 184
           +R+R AD  PIS E A  P +   G  ++++  S Y  LE + G V G A + + A+ A+
Sbjct: 126 ERIRYADKVPISFETAAVPYDLVKGFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLAS 185

Query: 185 SNEATLLGIKPKAALLLITRVTFDQTGTPYEFSRDLFRGDR 225
              +  L IK   A+L + +V+F + GTP+E+ R  + G+R
Sbjct: 186 ERISEYLAIKRGDAILRLRQVSFLKDGTPFEYVRTQYVGER 226


>tr|D4G1Z9|D4G1Z9_BACNA Tax_Id=645657 (yvoA)SubName: Full=Putative
           uncharacterized protein yvoA;[Bacillus subtilis subsp.
           natto BEST195]
          Length = 243

 Score =  114 bits (286), Expect = 9e-24
 Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 2/205 (0%)

Query: 21  PGAKLGSERDLAEKYGTSRSSLRQVLAALEEAGLVHRVIGRSGGIFISHGQVERNLSDVV 80
           P   L SER+ AE++G SR ++RQ L+ L   GL++R+ GR  G F+S  ++E+ L  + 
Sbjct: 30  PDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGR--GTFVSKPKMEQALQGLT 87

Query: 81  GVPAFLANQGYVAGTRILSXXXXXXXXXXXXALRLGPGEYVVEIQRVRLADGSPISLEQA 140
                + ++G   G+R++              L  G    + +I RVRLA+  P+++E +
Sbjct: 88  SFTEDMKSRGMTPGSRLIDYQLIDSTEELAAILGCGHPSSIHKITRVRLANDIPMAIESS 147

Query: 141 QFPAEKFPGLLEQQLGGSLYEVLESQYGLVPGRADERIEAVNATSNEATLLGIKPKAALL 200
             P E    L E     S+Y+ +E    +   RA + +E   AT+ EA +LGI+  A +L
Sbjct: 148 HIPFELAGELNESHFQSSIYDHIERYNSIPISRAKQELEPSAATTEEANILGIQKGAPVL 207

Query: 201 LITRVTFDQTGTPYEFSRDLFRGDR 225
           LI R T+ Q GT +E ++ ++RGDR
Sbjct: 208 LIKRTTYLQNGTAFEHAKSVYRGDR 232


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.316    0.134    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,917,330,385
Number of extensions: 74048809
Number of successful extensions: 237284
Number of sequences better than 10.0: 7715
Number of HSP's gapped: 235560
Number of HSP's successfully gapped: 7759
Length of query: 259
Length of database: 4,236,830,644
Length adjustment: 135
Effective length of query: 124
Effective length of database: 2,548,269,004
Effective search space: 315985356496
Effective search space used: 315985356496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)